ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF104107.1| Triticum aestivum small heat shock protein Hsp23.... 313 2e-82
2ref|XM_506984.1| PREDICTED Oryza sativa (japonica cultivar-group... 76 7e-11
3ref|XM_467890.1| Oryza sativa (japonica cultivar-group), mRNA 76 7e-11
4dbj|AK105464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 7e-11
5dbj|AK074003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 7e-11
6dbj|AK064389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 7e-11
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
8dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
9gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 48 0.017
10gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 46 0.066
11gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 46 0.066
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.066
13emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 46 0.066
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.066
15gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.066
16ref|XM_482705.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.26
17dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
18dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
19dbj|AK065326.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.26
20ref|NM_192152.1| Oryza sativa (japonica cultivar-group), predic... 42 1.0
21gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole b... 42 1.0
22emb|Z83845.14|HS407F17 Human DNA sequence from clone RP3-407F17 ... 42 1.0
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
24gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.0
25dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
26dbj|AK120588.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
27dbj|AK068769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
28emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC... 42 1.0
29gb|L22545.1|MUSCOLPRO Mouse alpha 1(XVIII) collagen mRNA, partia... 42 1.0
30gb|BC088123.1| Rattus norvegicus ficolin B, mRNA (cDNA clone MGC... 40 4.1
31gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, co... 40 4.1
32ref|XM_467457.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.1
33ref|XM_507525.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.1
34ref|XM_506937.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.1
35ref|NM_196512.1| Oryza sativa (japonica cultivar-group) unknown ... 40 4.1
36ref|XM_469610.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.1
37gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 4.1
38gb|AC167709.2| Reniera sp. JGI-2005 clone JGIBAYC-9O3, complete ... 40 4.1
39gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 4.1
40gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, comp... 40 4.1
41gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, comple... 40 4.1
42emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20... 40 4.1
43emb|AJ006589.2|BPH6589 Bacteriophage phi-C31 complete genome 40 4.1
44gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica culti... 40 4.1
45gb|AF274304.1|AF274304 Burkholderia pseudomallei maltose-binding... 40 4.1
46gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 4.1
47gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 4.1
48tpg|BK004861.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-gr... 40 4.1
49dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
50dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
51ref|NM_053634.1| Rattus norvegicus ficolin B (Fcnb), mRNA 40 4.1
52dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.1
53gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genom... 40 4.1
54gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb00... 40 4.1
55dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
56dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.1
57dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
58dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
59dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
60emb|BX248122.10| Zebrafish DNA sequence from clone CH211-214C20 ... 40 4.1
61emb|BX511214.8| Zebrafish DNA sequence from clone DKEY-191C11, c... 40 4.1
62dbj|AK119634.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
63dbj|AK104867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
64dbj|AK103643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
65ref|NM_208811.1| Eremothecium gossypii ACR055Wp (ACR055W), mRNA 40 4.1
66dbj|AK068469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
67dbj|AK067822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
68emb|AL954643.8| Mouse DNA sequence from clone RP24-142A19 on chr... 40 4.1
69gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
70gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complet... 40 4.1
71gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, st... 40 4.1
72dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 4.1
73emb|AL671911.12| Mouse DNA sequence from clone RP23-250F8 on chr... 40 4.1
74dbj|AB036792.1| Rattus norvegicus mRNA for ficolin-B, complete cds 40 4.1 
>gb|AF104107.1| Triticum aestivum small heat shock protein Hsp23.5 mRNA, nuclear
           gene encoding mitochondrial protein, complete cds
          Length = 878

 Score =  313 bits (158), Expect = 2e-82
 Identities = 247/278 (88%), Gaps = 9/278 (3%)
 Strand = Plus / Plus

                                                                       
Query: 33  agagcgtggagaatggcttcaagggtggtggcctccagcaggatcccgctggtgcgcgcc 92
           |||||||||| |||||| |||||||| |||  ||||| ||||||||||||||||||||||
Sbjct: 27  agagcgtggataatggcatcaagggttgtgttctccaacaggatcccgctggtgcgcgcc 86

                                                                       
Query: 93  atggagaacctcctggccgcgtcgtccggcccggctctcaggccggctgccgtctccgtc 152
           |||||||||||||||||||||||||||||| |||| ||| |||||||||||||| ||| |
Sbjct: 87  atggagaacctcctggccgcgtcgtccggctcggcgctccggccggctgccgtcgccggc 146

                                                                       
Query: 153 ggcgtccgcgggtacaacgccggcgcgcccctccgcagccacgacagggacgaggcgctc 212
           ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||
Sbjct: 147 ggcgtccgcgggtacaacgccggcgcgcccctccggagctacgacagggacgaggcggtc 206

                                                                       
Query: 213 gaagacacccgccacggcggccgcggcgcgcgcgagcgcggtgcctccgtgcccagcttc 272
           ||||||||||||         |||| ||||||||||||||    |  |||||||||||||
Sbjct: 207 gaagacacccgc---------cgcgtcgcgcgcgagcgcgacatcggcgtgcccagcttc 257

                                                 
Query: 273 ttctcagatgtgttccgtgacccgttcagcgcgccgca 310
           |||||||||||||||||||| |||||||||||||||||
Sbjct: 258 ttctcagatgtgttccgtgatccgttcagcgcgccgca 295
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>ref|XM_506984.1| PREDICTED Oryza sativa (japonica cultivar-group), P0471A11.32 mRNA
          Length = 1443

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 269 cttcttctcagatgtgttccgtgacccgttcagcgcgccgca 310
           |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 298 cttcttctcagatgtgttccgtgatccgttcagcgcgccgca 339
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>ref|XM_467890.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1110

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 269 cttcttctcagatgtgttccgtgacccgttcagcgcgccgca 310
           |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 304 cttcttctcagatgtgttccgtgatccgttcagcgcgccgca 345
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>dbj|AK105464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A02, full
           insert sequence
          Length = 1110

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 269 cttcttctcagatgtgttccgtgacccgttcagcgcgccgca 310
           |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 304 cttcttctcagatgtgttccgtgatccgttcagcgcgccgca 345
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>dbj|AK074003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076P21, full
           insert sequence
          Length = 865

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 269 cttcttctcagatgtgttccgtgacccgttcagcgcgccgca 310
           |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 299 cttcttctcagatgtgttccgtgatccgttcagcgcgccgca 340
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>dbj|AK064389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-F07, full
           insert sequence
          Length = 1442

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 269 cttcttctcagatgtgttccgtgacccgttcagcgcgccgca 310
           |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 298 cttcttctcagatgtgttccgtgatccgttcagcgcgccgca 339
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 277      cagatgtgttccgtgacccgttcagcgcgccgca 310
                |||||||||||||||| |||||||||||||||||
Sbjct: 31939763 cagatgtgttccgtgatccgttcagcgcgccgca 31939796



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 227      cggcggccgcggcgcgcgcgagcg 250
                ||||||| ||||||||||||||||
Sbjct: 29644235 cggcggcggcggcgcgcgcgagcg 29644212
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>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0471A11
          Length = 157740

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                
Query: 277    cagatgtgttccgtgacccgttcagcgcgccgca 310
              |||||||||||||||| |||||||||||||||||
Sbjct: 100764 cagatgtgttccgtgatccgttcagcgcgccgca 100797
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 225     cacggcggccgcggcgcgcgcgagcgcg 252
               ||||||||||||| ||||||||||||||
Sbjct: 1256129 cacggcggccgcgccgcgcgcgagcgcg 1256102



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 227     cggcggccgcggcgcgcgcg 246
               ||||||||||||||||||||
Sbjct: 1949132 cggcggccgcggcgcgcgcg 1949151



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     gcgcgcgcgagcgcggtgcc 257
               ||||||||||||||||||||
Sbjct: 1920255 gcgcgcgcgagcgcggtgcc 1920274
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 225     cacggcggccgcggcgcgcgcgagcgc 251
               ||||||||||||| |||||||||||||
Sbjct: 2663266 cacggcggccgcgccgcgcgcgagcgc 2663292



 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 229     gcggccgcggcgcgcgcgagcgcggtg 255
               ||||| |||||||||||||||||||||
Sbjct: 1144941 gcggcagcggcgcgcgcgagcgcggtg 1144915



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     cgcggcgcgcgcgagcgcgg 253
               ||||||||||||||||||||
Sbjct: 2217356 cgcggcgcgcgcgagcgcgg 2217375



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     cggccgcggcgcgcgcgagc 249
               ||||||||||||||||||||
Sbjct: 1223351 cggccgcggcgcgcgcgagc 1223332



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ccgcggcgcgcgcgagcgcg 252
              ||||||||||||||||||||
Sbjct: 350387 ccgcggcgcgcgcgagcgcg 350368
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 225     cacggcggccgcggcgcgcgcgagcgc 251
               ||||||||||||| |||||||||||||
Sbjct: 3870957 cacggcggccgcgccgcgcgcgagcgc 3870983



 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 229     gcggccgcggcgcgcgcgagcgcggtg 255
               ||||| |||||||||||||||||||||
Sbjct: 2055115 gcggcagcggcgcgcgcgagcgcggtg 2055141



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     cgcggcgcgcgcgagcgcgg 253
               ||||||||||||||||||||
Sbjct: 3390812 cgcggcgcgcgcgagcgcgg 3390831



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     cggccgcggcgcgcgcgagc 249
               ||||||||||||||||||||
Sbjct: 2282023 cggccgcggcgcgcgcgagc 2282042



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 233     ccgcggcgcgcgcgagcgcg 252
               ||||||||||||||||||||
Sbjct: 1080932 ccgcggcgcgcgcgagcgcg 1080913
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 231     ggccgcggcgcgcgcgagcgcggtgcc 257
               |||||||||| ||||||||||||||||
Sbjct: 4162312 ggccgcggcgagcgcgagcgcggtgcc 4162286



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 221      ccgccacggcggccgcggcg 240
                ||||||||||||||||||||
Sbjct: 29529958 ccgccacggcggccgcggcg 29529939
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 225     cacggcggccgcggcgcgcgcgagcgc 251
               ||||||||||||| |||||||||||||
Sbjct: 3612812 cacggcggccgcgccgcgcgcgagcgc 3612838



 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 229     gcggccgcggcgcgcgcgagcgcggtg 255
               ||||| |||||||||||||||||||||
Sbjct: 2321010 gcggcagcggcgcgcgcgagcgcggtg 2320984



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     cgcggcgcgcgcgagcgcgg 253
               ||||||||||||||||||||
Sbjct: 3131900 cgcggcgcgcgcgagcgcgg 3131919



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     cggccgcggcgcgcgcgagc 249
               ||||||||||||||||||||
Sbjct: 2092675 cggccgcggcgcgcgcgagc 2092656



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ccgcggcgcgcgcgagcgcg 252
              ||||||||||||||||||||
Sbjct: 961906 ccgcggcgcgcgcgagcgcg 961887
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 231     ggccgcggcgcgcgcgagcgcggtgcc 257
               |||||||||| ||||||||||||||||
Sbjct: 4162421 ggccgcggcgagcgcgagcgcggtgcc 4162395



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 221      ccgccacggcggccgcggcg 240
                ||||||||||||||||||||
Sbjct: 29621380 ccgccacggcggccgcggcg 29621361
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>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 231   ggccgcggcgcgcgcgagcgcggtgcc 257
             |||||||||| ||||||||||||||||
Sbjct: 62949 ggccgcggcgagcgcgagcgcggtgcc 62923
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>ref|XM_482705.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 579

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 227 cggcggccgcggcgcgcgcgagcgcg 252
           |||||||||| |||||||||||||||
Sbjct: 397 cggcggccgccgcgcgcgcgagcgcg 372
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 227      cggcggccgcggcgcgcgcgagcgcg 252
                |||||||||| |||||||||||||||
Sbjct: 22027119 cggcggccgccgcgcgcgcgagcgcg 22027144
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>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_H01
          Length = 128124

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 227    cggcggccgcggcgcgcgcgagcgcg 252
              |||||||||| |||||||||||||||
Sbjct: 112868 cggcggccgccgcgcgcgcgagcgcg 112893
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>dbj|AK065326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F03, full
            insert sequence
          Length = 3579

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 227  cggcggccgcggcgcgcgcgagcgcg 252
            |||||||||| |||||||||||||||
Sbjct: 3030 cggcggccgccgcgcgcgcgagcgcg 3055
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>ref|NM_192152.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3156

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 80   gctggtgcgcgccatggagaa 100
            |||||||||||||||||||||
Sbjct: 2052 gctggtgcgcgccatggagaa 2072
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>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene
             cluster, complete sequence
          Length = 84868

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   ccgcggcgcgcgcgagcgcgg 253
             |||||||||||||||||||||
Sbjct: 12316 ccgcggcgcgcgcgagcgcgg 12336
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>emb|Z83845.14|HS407F17 Human DNA sequence from clone RP3-407F17 on chromosome 22q13.1-13.2
             Contains the gene for TAB1 (TAK1 binding protein 1), ESTs,
             STSs, GSSs and two putative CpG islands, complete sequence
          Length = 69660

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 252   ggtgcctccgtgcccagcttc 272
             |||||||||||||||||||||
Sbjct: 66354 ggtgcctccgtgcccagcttc 66334
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 80       gctggtgcgcgccatggagaa 100
                |||||||||||||||||||||
Sbjct: 28567453 gctggtgcgcgccatggagaa 28567473
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 228     ggcggccgcggcgcgcgcgagcgcg 252
               ||||||||||||||| |||||||||
Sbjct: 1679549 ggcggccgcggcgcgggcgagcgcg 1679573



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 227     cggcggccgcggcgcgcgcg 246
               ||||||||||||||||||||
Sbjct: 4382407 cggcggccgcggcgcgcgcg 4382426



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 228     ggcggccgcggcgcgcgcgagcgc 251
               ||||||| ||||||||||||||||
Sbjct: 3082790 ggcggcctcggcgcgcgcgagcgc 3082813



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     cgcggcgcgcgcgagcgcgg 253
               ||||||||||||||||||||
Sbjct: 2562973 cgcggcgcgcgcgagcgcgg 2562954



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 230     cggccgcggcgcgcgcgagcgcgg 253
               |||||||||||||| |||||||||
Sbjct: 2067976 cggccgcggcgcgctcgagcgcgg 2067999
to top
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034C09
          Length = 170226

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    gctggtgcgcgccatggagaa 100
             |||||||||||||||||||||
Sbjct: 93892 gctggtgcgcgccatggagaa 93912
to top
>dbj|AK120588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145F17, full
           insert sequence
          Length = 2328

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  gctggtgcgcgccatggagaa 100
           |||||||||||||||||||||
Sbjct: 849 gctggtgcgcgccatggagaa 869
to top
>dbj|AK068769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166F08, full
           insert sequence
          Length = 1031

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 141 gccgtctccgtcggcgtccgc 161
           |||||||||||||||||||||
Sbjct: 337 gccgtctccgtcggcgtccgc 317
to top
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1,
             ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10,
             ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and
             ORF19
          Length = 86080

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   ccgcggcgcgcgcgagcgcgg 253
             |||||||||||||||||||||
Sbjct: 12234 ccgcggcgcgcgcgagcgcgg 12254
to top
>gb|L22545.1|MUSCOLPRO Mouse alpha 1(XVIII) collagen mRNA, partial cds
          Length = 4031

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 20   agggagagaagggagagcgtggaga 44
            |||||||||||||||||| ||||||
Sbjct: 2309 agggagagaagggagagcctggaga 2333
to top
>gb|BC088123.1| Rattus norvegicus ficolin B, mRNA (cDNA clone MGC:108632
           IMAGE:7376834), complete cds
          Length = 1211

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 22  ggagagaagggagagcgtggagaa 45
           ||||||||||||| ||||||||||
Sbjct: 277 ggagagaagggagtgcgtggagaa 300
to top
>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence
          Length = 191726

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    gtcagggagagaagggagag 36
             ||||||||||||||||||||
Sbjct: 90338 gtcagggagagaagggagag 90319
to top
>ref|XM_467457.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cggcggccgcggcgcgcgcgagcg 250
           ||||||| ||||||||||||||||
Sbjct: 46  cggcggcggcggcgcgcgcgagcg 23
to top
>ref|XM_507525.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B12.26
           mRNA
          Length = 1246

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cggcggccgcggcgcgcgcgagcg 250
           ||||||| ||||||||||||||||
Sbjct: 46  cggcggcggcggcgcgcgcgagcg 23
to top
>ref|XM_506937.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B12.26
           mRNA
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cggcggccgcggcgcgcgcgagcg 250
           ||||||| ||||||||||||||||
Sbjct: 204 cggcggcggcggcgcgcgcgagcg 181
to top
>ref|NM_196512.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0006I13.1), mRNA
          Length = 906

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 ccgcggcgcgcgcgagcgcg 252
           ||||||||||||||||||||
Sbjct: 570 ccgcggcgcgcgcgagcgcg 589
to top
>ref|XM_469610.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1812

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 ccgccacggcggccgcggcg 240
           ||||||||||||||||||||
Sbjct: 202 ccgccacggcggccgcggcg 183
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     cggccgcggcgcgcgcgagc 249
               ||||||||||||||||||||
Sbjct: 2745438 cggccgcggcgcgcgcgagc 2745457
to top
>gb|AC167709.2| Reniera sp. JGI-2005 clone JGIBAYC-9O3, complete sequence
          Length = 38438

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 18   tcagggagagaagggagagcgtgg 41
            ||||||| ||||||||||||||||
Sbjct: 7801 tcagggacagaagggagagcgtgg 7824
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     ccgccacggcggccgcggcg 240
               ||||||||||||||||||||
Sbjct: 1521158 ccgccacggcggccgcggcg 1521177
to top
>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence
          Length = 193216

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     gtcagggagagaagggagag 36
              ||||||||||||||||||||
Sbjct: 153146 gtcagggagagaagggagag 153165
to top
>gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, complete sequence
          Length = 205623

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cagtcacagtcagggagaga 28
             ||||||||||||||||||||
Sbjct: 90117 cagtcacagtcagggagaga 90136
to top
>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1
             Contains the 3' part of the CACNA1I gene for
             voltage-dependent calcium channel, alpha 1I subunit, ESTs,
             STSs, GSSs and a putative CpG island, complete sequence
          Length = 213721

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    gccatggagaacctcctggc 109
             ||||||||||||||||||||
Sbjct: 26208 gccatggagaacctcctggc 26227
to top
>emb|AJ006589.2|BPH6589 Bacteriophage phi-C31 complete genome
          Length = 41491

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   gctgccgtctccgtcggcgt 157
             ||||||||||||||||||||
Sbjct: 12511 gctgccgtctccgtcggcgt 12530
to top
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare Clone OSJNBa0061K21 From Chromosome 10,
             complete sequence
          Length = 112721

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ccgcggcgcgcgcgagcgcg 252
             ||||||||||||||||||||
Sbjct: 83906 ccgcggcgcgcgcgagcgcg 83887
to top
>gb|AF274304.1|AF274304 Burkholderia pseudomallei maltose-binding protein (malE) gene,
            complete cds
          Length = 1251

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  cgcggcgcgcgcgagcgcgg 253
            ||||||||||||||||||||
Sbjct: 1239 cgcggcgcgcgcgagcgcgg 1220
to top
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    gccacggcggccgcggcgcgcgcg 246
              ||||| ||||||||||||||||||
Sbjct: 455781 gccaccgcggccgcggcgcgcgcg 455804
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    ccgccacggcggccgcggcg 240
              ||||||||||||||||||||
Sbjct: 382366 ccgccacggcggccgcggcg 382347
to top
>tpg|BK004861.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group)
            growth-regulating factor 6 (GRF6) gene, complete cds
          Length = 6870

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  ccgccacggcggccgcggcg 240
            ||||||||||||||||||||
Sbjct: 1588 ccgccacggcggccgcggcg 1569
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 233      ccgcggcgcgcgcgagcgcg 252
                ||||||||||||||||||||
Sbjct: 14144378 ccgcggcgcgcgcgagcgcg 14144359
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 154      gcgtccgcgggtacaacgcc 173
                ||||||||||||||||||||
Sbjct: 21869351 gcgtccgcgggtacaacgcc 21869370
to top
>ref|NM_053634.1| Rattus norvegicus ficolin B (Fcnb), mRNA
          Length = 1127

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 22  ggagagaagggagagcgtggagaa 45
           ||||||||||||| ||||||||||
Sbjct: 285 ggagagaagggagtgcgtggagaa 308
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 232     gccgcggcgcgcgcgagcgcggtg 255
               ||||||||||| ||||||||||||
Sbjct: 5400723 gccgcggcgcgggcgagcgcggtg 5400700



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 222     cgccacggcggccgcggcgc 241
               ||||||||||||||||||||
Sbjct: 2539840 cgccacggcggccgcggcgc 2539821
to top
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete
             sequence
          Length = 132782

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   ccgccacggcggccgcggcg 240
             ||||||||||||||||||||
Sbjct: 52588 ccgccacggcggccgcggcg 52569
to top
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
             complete sequence
          Length = 142737

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ccgcggcgcgcgcgagcgcg 252
             ||||||||||||||||||||
Sbjct: 16451 ccgcggcgcgcgcgagcgcg 16432
to top
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1191_G08
          Length = 172832

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   cggcggccgcggcgcgcgcgagcg 250
             ||||||| ||||||||||||||||
Sbjct: 13214 cggcggcggcggcgcgcgcgagcg 13191
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 227     cggcggccgcggcgcgcgcg 246
               ||||||||||||||||||||
Sbjct: 1870919 cggcggccgcggcgcgcgcg 1870938
to top
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0610D01
          Length = 146418

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    gcgtccgcgggtacaacgcc 173
              ||||||||||||||||||||
Sbjct: 127432 gcgtccgcgggtacaacgcc 127451
to top
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0006A22
          Length = 190690

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   gcgtccgcgggtacaacgcc 173
             ||||||||||||||||||||
Sbjct: 91836 gcgtccgcgggtacaacgcc 91855
to top
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1479_B12
          Length = 127089

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 227    cggcggccgcggcgcgcgcgagcg 250
              ||||||| ||||||||||||||||
Sbjct: 101956 cggcggcggcggcgcgcgcgagcg 101933
to top
>emb|BX248122.10| Zebrafish DNA sequence from clone CH211-214C20 in linkage group 4,
             complete sequence
          Length = 216208

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     caagacagtcacagtcaggg 23
             ||||||||||||||||||||
Sbjct: 96417 caagacagtcacagtcaggg 96436
to top
>emb|BX511214.8| Zebrafish DNA sequence from clone DKEY-191C11, complete sequence
          Length = 211331

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      caagacagtcacagtcaggg 23
              ||||||||||||||||||||
Sbjct: 164247 caagacagtcacagtcaggg 164228
to top
>dbj|AK119634.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F01, full
           insert sequence
          Length = 1641

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 ccgcggcgcgcgcgagcgcg 252
           ||||||||||||||||||||
Sbjct: 762 ccgcggcgcgcgcgagcgcg 781
to top
>dbj|AK104867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H04, full
           insert sequence
          Length = 1221

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cggcggccgcggcgcgcgcgagcg 250
           ||||||| ||||||||||||||||
Sbjct: 46  cggcggcggcggcgcgcgcgagcg 23
to top
>dbj|AK103643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134O12, full
           insert sequence
          Length = 1245

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cggcggccgcggcgcgcgcgagcg 250
           ||||||| ||||||||||||||||
Sbjct: 45  cggcggcggcggcgcgcgcgagcg 22
to top
>ref|NM_208811.1| Eremothecium gossypii ACR055Wp (ACR055W), mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 223 gccacggcggccgcggcgcgcgcg 246
           ||||| ||||||||||||||||||
Sbjct: 562 gccaccgcggccgcggcgcgcgcg 585
to top
>dbj|AK068469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156D24, full
           insert sequence
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cggcggccgcggcgcgcgcgagcg 250
           ||||||| ||||||||||||||||
Sbjct: 204 cggcggcggcggcgcgcgcgagcg 181
to top
>dbj|AK067822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119P11, full
           insert sequence
          Length = 1538

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 ccgcggcgcgcgcgagcgcg 252
           ||||||||||||||||||||
Sbjct: 766 ccgcggcgcgcgcgagcgcg 785
to top
>emb|AL954643.8| Mouse DNA sequence from clone RP24-142A19 on chromosome X, complete
            sequence
          Length = 71661

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   agtcagggagagaagggaga 35
            ||||||||||||||||||||
Sbjct: 9261 agtcagggagagaagggaga 9242
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 233      ccgcggcgcgcgcgagcgcg 252
                ||||||||||||||||||||
Sbjct: 14152620 ccgcggcgcgcgcgagcgcg 14152601
to top
>gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complete sequence
          Length = 184937

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     cagtcacagtcagggagaga 28
             ||||||||||||||||||||
Sbjct: 23182 cagtcacagtcagggagaga 23163
to top
>gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, starter module and modules
             1-7, (tylG) gene, complete cds
          Length = 43280

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    gggtggtggcctccagcagg 74
             ||||||||||||||||||||
Sbjct: 28425 gggtggtggcctccagcagg 28406
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 227     cggcggccgcggcgcgcgcgagcg 250
               |||||||||||| |||||||||||
Sbjct: 2697104 cggcggccgcggggcgcgcgagcg 2697127
to top
>emb|AL671911.12| Mouse DNA sequence from clone RP23-250F8 on chromosome X, complete
             sequence
          Length = 213401

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    agtcagggagagaagggaga 35
             ||||||||||||||||||||
Sbjct: 16674 agtcagggagagaagggaga 16693
to top
>dbj|AB036792.1| Rattus norvegicus mRNA for ficolin-B, complete cds
          Length = 1127

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 22  ggagagaagggagagcgtggagaa 45
           ||||||||||||| ||||||||||
Sbjct: 285 ggagagaagggagtgcgtggagaa 308


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,353,453
Number of Sequences: 3902068
Number of extensions: 2353453
Number of successful extensions: 100365
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95669
Number of HSP's gapped (non-prelim): 4696
length of query: 310
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 288
effective length of database: 17,147,199,772
effective search space: 4938393534336
effective search space used: 4938393534336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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