ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF467918.1| Danio rerio cardiac troponin T mRNA, complete cds... 46 0.058
2ref|XM_500428.1| Yarrowia lipolytica CLIB122, YALI0B02544g predi... 44 0.23
3emb|CT033781.12| Mouse DNA sequence from clone RP24-85H21 on chr... 44 0.23
4emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 44 0.23
5ref|XM_475550.1| Oryza sativa (japonica cultivar-group), predic... 42 0.90
6gb|BT016325.1| Zea mays clone Contig158 mRNA sequence 42 0.90
7gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.90
8gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.90
9gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.90
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
11dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.90
12dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.90
13dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.90
14dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.90
15gb|AY104589.1| Zea mays PCO067801 mRNA sequence 42 0.90
16gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 0.90
17gb|AY369075.1| Bos taurus retinyl ester hydrolase type 1 (BREH1)... 40 3.6
18ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.6
19ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.6
20ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.6
21ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
22ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.6
23ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.6
24ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.6
25ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.6
26gb|BC079323.1| Rattus norvegicus RAB21, member RAS oncogene fami... 40 3.6
27ref|NM_001012287.1| Bos taurus retinyl ester hydrolase type 1 (B... 40 3.6
28gb|AC161170.7| Mus musculus chromosome 1, clone RP23-307G23, com... 40 3.6
29gb|AC126271.4| Mus musculus BAC clone RP23-237H9 from chromosome... 40 3.6
30gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complet... 40 3.6
31emb|AL672142.9| Human DNA sequence from clone RP11-101E3 on chro... 40 3.6
32gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, c... 40 3.6
33gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence 40 3.6
34emb|AL596187.15| Mouse DNA sequence from clone RP23-287H9 on chr... 40 3.6
35emb|AL645686.10| Mouse DNA sequence from clone RP23-330D1 on chr... 40 3.6
36gb|AC027307.5| Homo sapiens chromosome 19 clone CTB-25B13, compl... 40 3.6
37gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence 40 3.6
38gb|AC099519.2| Homo sapiens chromosome 5 clone RP11-695O10, comp... 40 3.6
39gb|AC099504.2| Homo sapiens chromosome 5 clone RP11-219L6, compl... 40 3.6
40gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, com... 40 3.6
41gb|BC102781.1| Bos taurus retinyl ester hydrolase type 1, mRNA (... 40 3.6
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
43gb|AC034305.6|AC034305 Homo sapiens chromosome 17, clone RP11-60... 40 3.6
44gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone... 40 3.6
45ref|NM_001004238.1| Rattus norvegicus RAB21, member RAS oncogene... 40 3.6
46dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
47emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on ch... 40 3.6
48dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
49gb|AF164960.1|AF164960 Streptomyces fradiae strain T#2717 urdamy... 40 3.6
50dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
51dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
52dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
53dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
54dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
55dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
56dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
57dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
58gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1... 40 3.6
59emb|BX950204.17| Zebrafish DNA sequence from clone DKEY-252P7 in... 40 3.6
60emb|BX927103.12| Zebrafish DNA sequence from clone DKEY-262M23 i... 40 3.6
61dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
62emb|AL110118.7|CNS018P3 Human chromosome 14 DNA sequence BAC R-3... 40 3.6
63gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromo... 40 3.6 
>gb|AF467918.1| Danio rerio cardiac troponin T mRNA, complete cds, alternatively
           spliced
          Length = 1008

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 80  ctcctgctgaccctcctcctgctcctc 106
           |||||||||| ||||||||||||||||
Sbjct: 108 ctcctgctgagcctcctcctgctcctc 82
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>ref|XM_500428.1| Yarrowia lipolytica CLIB122, YALI0B02544g predicted mRNA
          Length = 4458

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 81   tcctgctgaccctcctcctgct 102
            ||||||||||||||||||||||
Sbjct: 2417 tcctgctgaccctcctcctgct 2396
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>emb|CT033781.12| Mouse DNA sequence from clone RP24-85H21 on chromosome 13, complete
              sequence
          Length = 206653

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 77     ccgctcctgctgaccctcctcctgctcctc 106
              ||||||||||||  ||||||||||||||||
Sbjct: 181079 ccgctcctgctgctcctcctcctgctcctc 181050
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 81     tcctgctgaccctcctcctgct 102
              ||||||||||||||||||||||
Sbjct: 385517 tcctgctgaccctcctcctgct 385538
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>ref|XM_475550.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2316

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 111  ccgccgtcgcggcgcccgcca 131
            |||||||||||||||||||||
Sbjct: 1060 ccgccgtcgcggcgcccgcca 1040
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>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence
          Length = 1172

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ctgctcctcaccaccgccgtc 118
           |||||||||||||||||||||
Sbjct: 287 ctgctcctcaccaccgccgtc 307
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 98     ctgctcctcaccaccgccgtc 118
              |||||||||||||||||||||
Sbjct: 149546 ctgctcctcaccaccgccgtc 149526
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 98    ctgctcctcaccaccgccgtc 118
             |||||||||||||||||||||
Sbjct: 46909 ctgctcctcaccaccgccgtc 46889
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   ccgccgtcgcggcgcccgcca 131
             |||||||||||||||||||||
Sbjct: 57051 ccgccgtcgcggcgcccgcca 57031
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 98       ctgctcctcaccaccgccgtc 118
                |||||||||||||||||||||
Sbjct: 19446197 ctgctcctcaccaccgccgtc 19446177



 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 111     ccgccgtcgcggcgcccgcca 131
               |||||||||||||||||||||
Sbjct: 1395389 ccgccgtcgcggcgcccgcca 1395369
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>dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K02, full
            insert sequence
          Length = 2511

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 111  ccgccgtcgcggcgcccgcca 131
            |||||||||||||||||||||
Sbjct: 1070 ccgccgtcgcggcgcccgcca 1050
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>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full
           insert sequence
          Length = 1060

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ctgctcctcaccaccgccgtc 118
           |||||||||||||||||||||
Sbjct: 279 ctgctcctcaccaccgccgtc 299
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>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full
           insert sequence
          Length = 1060

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ctgctcctcaccaccgccgtc 118
           |||||||||||||||||||||
Sbjct: 279 ctgctcctcaccaccgccgtc 299
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>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full
           insert sequence
          Length = 1106

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ctgctcctcaccaccgccgtc 118
           |||||||||||||||||||||
Sbjct: 280 ctgctcctcaccaccgccgtc 300
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>gb|AY104589.1| Zea mays PCO067801 mRNA sequence
          Length = 1197

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ctgctcctcaccaccgccgtc 118
           |||||||||||||||||||||
Sbjct: 333 ctgctcctcaccaccgccgtc 353
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 82     cctgctgaccctcctcctgctcctc 106
              ||||||||||||||||| |||||||
Sbjct: 914658 cctgctgaccctcctcccgctcctc 914634
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>gb|AY369075.1| Bos taurus retinyl ester hydrolase type 1 (BREH1) mRNA, complete
           cds
          Length = 1704

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  tccgctcctgctgaccctcc 95
           ||||||||||||||||||||
Sbjct: 680 tccgctcctgctgaccctcc 661
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>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 53  caccaccgccgtcgcggcgc 72
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>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 54  caccaccgccgtcgcggcgc 73
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>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1058

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 56  caccaccgccgtcgcggcgc 75
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>ref|XM_478841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 59  caccaccgccgtcgcggcgc 78
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>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 59  caccaccgccgtcgcggcgc 78
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>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 60  caccaccgccgtcgcggcgc 79
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>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1069

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 60  caccaccgccgtcgcggcgc 79
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>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 63  caccaccgccgtcgcggcgc 82
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>gb|BC079323.1| Rattus norvegicus RAB21, member RAS oncogene family, mRNA (cDNA
           clone MGC:94502 IMAGE:7135453), complete cds
          Length = 1515

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 106 caccaccgccgtcgcggcgcccgc 129
           ||||||||||| ||||||||||||
Sbjct: 174 caccaccgccgccgcggcgcccgc 151
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>ref|NM_001012287.1| Bos taurus retinyl ester hydrolase type 1 (BREH1), mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  tccgctcctgctgaccctcc 95
           ||||||||||||||||||||
Sbjct: 680 tccgctcctgctgaccctcc 661
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>gb|AC161170.7| Mus musculus chromosome 1, clone RP23-307G23, complete sequence
          Length = 222820

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 79     gctcctgctgaccctcctcctgctcctc 106
              ||||||||||  ||||||||||||||||
Sbjct: 167125 gctcctgctgctcctcctcctgctcctc 167152
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>gb|AC126271.4| Mus musculus BAC clone RP23-237H9 from chromosome 5, complete sequence
          Length = 194736

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 79     gctcctgctgaccctcctcctgctcctc 106
              |||||| |||| ||||||||||||||||
Sbjct: 145132 gctcctcctgatcctcctcctgctcctc 145159
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>gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complete sequence
          Length = 161566

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     ccctcctcctgctcctcacc 109
              ||||||||||||||||||||
Sbjct: 148852 ccctcctcctgctcctcacc 148833
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>emb|AL672142.9| Human DNA sequence from clone RP11-101E3 on chromosome 9 Contains the
             5' end of the CCBL1 gene for cysteine conjugate-beta
             lyase; cytoplasmic (glutamine  transaminase K, kyneurenine
             aminotransferase),  the LRRC8 gene for leucine-rich
             repeat-containing 8, the PHYHD1 gene for phytanoyl-CoA
             dioxygenase domain containing 1, the TMEM15 gene for
             transmembrane protein 15, the 5' end of the NUP188 gene
             for nucleoporin 188kDa and three CpG islands, complete
             sequence
          Length = 132179

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    ccctcctcctgctcctcacc 109
             ||||||||||||||||||||
Sbjct: 24497 ccctcctcctgctcctcacc 24478
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>gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, complete sequence
          Length = 195494

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 83     ctgctgaccctcctcctgctcctc 106
              ||||||||||||||||||| ||||
Sbjct: 154519 ctgctgaccctcctcctgcccctc 154542
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>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence
          Length = 164663

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     tcctcctgctcctcaccacc 112
              ||||||||||||||||||||
Sbjct: 120039 tcctcctgctcctcaccacc 120020
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>emb|AL596187.15| Mouse DNA sequence from clone RP23-287H9 on chromosome 11 Contains part
             of a novel gene, the 5' end of a gene that is a possible
             ortholog of human dynein axonemal heavy polypeptide 9
             (DNAH9) and a CpG island, complete sequence
          Length = 202358

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ctcctcctgtccccaccact 32
             ||||||||||||||||||||
Sbjct: 20450 ctcctcctgtccccaccact 20469
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>emb|AL645686.10| Mouse DNA sequence from clone RP23-330D1 on chromosome 13, complete
             sequence
          Length = 137782

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    accaccagcttgcagccatggcgg 56
             |||||||| |||||||||||||||
Sbjct: 64367 accaccaggttgcagccatggcgg 64390
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>gb|AC027307.5| Homo sapiens chromosome 19 clone CTB-25B13, complete sequence
          Length = 153570

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ctcctcctgtccccaccact 32
             ||||||||||||||||||||
Sbjct: 76618 ctcctcctgtccccaccact 76599
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>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence
          Length = 185378

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    ctgctgaccctcctcctgctcctc 106
             ||||||||||||||||||| ||||
Sbjct: 33625 ctgctgaccctcctcctgcccctc 33648
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>gb|AC099519.2| Homo sapiens chromosome 5 clone RP11-695O10, complete sequence
          Length = 206163

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     ctcctcctgtccccaccact 32
              ||||||||||||||||||||
Sbjct: 143987 ctcctcctgtccccaccact 143968
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>gb|AC099504.2| Homo sapiens chromosome 5 clone RP11-219L6, complete sequence
          Length = 162841

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ctcctcctgtccccaccact 32
             ||||||||||||||||||||
Sbjct: 90339 ctcctcctgtccccaccact 90320
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>gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, complete sequence
          Length = 169770

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     ctgctgaccctcctcctgctcctc 106
              ||||||||||||||||||| ||||
Sbjct: 136441 ctgctgaccctcctcctgcccctc 136418
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>gb|BC102781.1| Bos taurus retinyl ester hydrolase type 1, mRNA (cDNA clone
           MGC:127143 IMAGE:7944112), complete cds
          Length = 1920

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  tccgctcctgctgaccctcc 95
           ||||||||||||||||||||
Sbjct: 732 tccgctcctgctgaccctcc 713
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 106      caccaccgccgtcgcggcgc 125
                ||||||||||||||||||||
Sbjct: 23304271 caccaccgccgtcgcggcgc 23304290
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>gb|AC034305.6|AC034305 Homo sapiens chromosome 17, clone RP11-609D21, complete sequence
          Length = 103699

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    ctgctgaccctcctcctgctcctc 106
             ||||||||||||||||||| ||||
Sbjct: 94460 ctgctgaccctcctcctgcccctc 94483
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>gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone rp23-362c8, complete
              sequence
          Length = 238658

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 79     gctcctgctgaccctcctcctgctcctc 106
              ||||||||||  ||||||||||||||||
Sbjct: 160104 gctcctgctgctcctcctcctgctcctc 160131
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>ref|NM_001004238.1| Rattus norvegicus RAB21, member RAS oncogene family (Rab21), mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 106 caccaccgccgtcgcggcgcccgc 129
           ||||||||||| ||||||||||||
Sbjct: 174 caccaccgccgccgcggcgcccgc 151
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>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   caccaccgccgtcgcggcgc 125
             ||||||||||||||||||||
Sbjct: 59529 caccaccgccgtcgcggcgc 59548
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>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete
             sequence
          Length = 91841

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ctcataatccactcctcctg 21
             ||||||||||||||||||||
Sbjct: 49111 ctcataatccactcctcctg 49092
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>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full
           insert sequence
          Length = 1088

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 74  caccaccgccgtcgcggcgc 93
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>gb|AF164960.1|AF164960 Streptomyces fradiae strain T#2717 urdamycin biosynthetic gene
            cluster, partial sequence
          Length = 8018

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   cctgctcctcaccaccgccgtcgc 120
            ||||||||||| ||||||||||||
Sbjct: 4102 cctgctcctcatcaccgccgtcgc 4125
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>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full
           insert sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 60  caccaccgccgtcgcggcgc 79
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>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full
           insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 60  caccaccgccgtcgcggcgc 79
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>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full
           insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 90  caccaccgccgtcgcggcgc 109
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>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full
           insert sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 56  caccaccgccgtcgcggcgc 75
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>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full
           insert sequence
          Length = 1061

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 59  caccaccgccgtcgcggcgc 78
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>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full
           insert sequence
          Length = 1062

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 53  caccaccgccgtcgcggcgc 72
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>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full
           insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 54  caccaccgccgtcgcggcgc 73
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>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full
           insert sequence
          Length = 1646

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 54  caccaccgccgtcgcggcgc 73
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>gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1) mRNA, complete
           cds
          Length = 2440

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 91  cctcctcctgctcctcaccaccgccgtc 118
           ||||||||| |||||| |||||||||||
Sbjct: 58  cctcctcctcctcctcgccaccgccgtc 85
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>emb|BX950204.17| Zebrafish DNA sequence from clone DKEY-252P7 in linkage group 18,
             complete sequence
          Length = 133263

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ccaccactaccaccagcttg 44
             ||||||||||||||||||||
Sbjct: 80113 ccaccactaccaccagcttg 80094
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>emb|BX927103.12| Zebrafish DNA sequence from clone DKEY-262M23 in linkage group 18,
              complete sequence
          Length = 185008

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     ccaccactaccaccagcttg 44
              ||||||||||||||||||||
Sbjct: 153378 ccaccactaccaccagcttg 153359
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>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full
           insert sequence
          Length = 1068

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 caccaccgccgtcgcggcgc 125
           ||||||||||||||||||||
Sbjct: 63  caccaccgccgtcgcggcgc 82
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>emb|AL110118.7|CNS018P3 Human chromosome 14 DNA sequence BAC R-371E8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192265

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ctcctcctgtccccaccact 32
             ||||||||||||||||||||
Sbjct: 65573 ctcctcctgtccccaccact 65592
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>gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromosome unknown, complete
              sequence
          Length = 219428

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     ccctcctcctgctcctcacc 109
              ||||||||||||||||||||
Sbjct: 108832 ccctcctcctgctcctcacc 108851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,791,479
Number of Sequences: 3902068
Number of extensions: 1791479
Number of successful extensions: 66083
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65753
Number of HSP's gapped (non-prelim): 330
length of query: 274
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 252
effective length of database: 17,147,199,772
effective search space: 4321094342544
effective search space used: 4321094342544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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