ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469071.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1712 Score = 291 bits (147), Expect = 9e-76 Identities = 237/267 (88%) Strand = Plus / Plus Query: 129 aggagctacagcattacgctcctccccggcgacggcatcggcccggaggtcgtcgccgtc 188 |||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 287 aggagctacaacgtcacgctcctccccggtgacggcatcggcccggaggtggtcgccgtc 346 Query: 189 gccaaggacgtcctctccgccgccggctccaaggaaggcgtggagctccggtacaaggag 248 |||||||||||||||||| ||||||| | |||||||| ||| |||| | | ||||| Sbjct: 347 gccaaggacgtcctctccctcgccggcgctctcgaaggcgtcgagttccgcttccaggag 406 Query: 249 atgctgatgggcggcgcggcgctggacgcggccggcgtgccgctccccgacgagacgctc 308 | ||||||||||||||||||| |||| ||| ||||||||||||||| || ||||||||| Sbjct: 407 aagctgatgggcggcgcggcggtggatgcgtacggcgtgccgctcccggaggagacgctc 466 Query: 309 gcggcggcgcgggcctcggacgccatcctcctcggcgcgattggagggtataagtgggat 368 |||||||||| ||| ||||||||| ||||||||||||| || |||||||||||||||||| Sbjct: 467 gcggcggcgcaggcgtcggacgccgtcctcctcggcgccataggagggtataagtgggat 526 Query: 369 aacaatgagaagcatctcaagccagag 395 |||||||||||||| |||||||||||| Sbjct: 527 aacaatgagaagcacctcaagccagag 553
>dbj|AK120254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L02, full insert sequence Length = 1540 Score = 291 bits (147), Expect = 9e-76 Identities = 237/267 (88%) Strand = Plus / Plus Query: 129 aggagctacagcattacgctcctccccggcgacggcatcggcccggaggtcgtcgccgtc 188 |||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 120 aggagctacaacgtcacgctcctccccggtgacggcatcggcccggaggtggtcgccgtc 179 Query: 189 gccaaggacgtcctctccgccgccggctccaaggaaggcgtggagctccggtacaaggag 248 |||||||||||||||||| ||||||| | |||||||| ||| |||| | | ||||| Sbjct: 180 gccaaggacgtcctctccctcgccggcgctctcgaaggcgtcgagttccgcttccaggag 239 Query: 249 atgctgatgggcggcgcggcgctggacgcggccggcgtgccgctccccgacgagacgctc 308 | ||||||||||||||||||| |||| ||| ||||||||||||||| || ||||||||| Sbjct: 240 aagctgatgggcggcgcggcggtggatgcgtacggcgtgccgctcccggaggagacgctc 299 Query: 309 gcggcggcgcgggcctcggacgccatcctcctcggcgcgattggagggtataagtgggat 368 |||||||||| ||| ||||||||| ||||||||||||| || |||||||||||||||||| Sbjct: 300 gcggcggcgcaggcgtcggacgccgtcctcctcggcgccataggagggtataagtgggat 359 Query: 369 aacaatgagaagcatctcaagccagag 395 |||||||||||||| |||||||||||| Sbjct: 360 aacaatgagaagcacctcaagccagag 386
>gb|BT016862.1| Zea mays clone Contig695 mRNA sequence Length = 1573 Score = 226 bits (114), Expect = 4e-56 Identities = 237/278 (85%) Strand = Plus / Minus Query: 114 tgctccgccgcggccaggagctacagcattacgctcctccccggcgacggcatcggcccg 173 |||||||| ||||| |||||| ||| || |||||||||||||| |||||||||||||| Sbjct: 1423 tgctccgcggcggcgaggagcgacaatatcacgctcctccccggagacggcatcggccct 1364 Query: 174 gaggtcgtcgccgtcgccaaggacgtcctctccgccgccggctccaaggaaggcgtggag 233 ||||| |||||||||||||||||||| || ||| ||||||| || |||||||| ||| Sbjct: 1363 gaggtggtcgccgtcgccaaggacgtgctgtccctcgccggcgccctcgaaggcgtcgag 1304 Query: 234 ctccggtacaaggagatgctgatgggcggcgcggcgctggacgcggccggcgtgccgctc 293 ||||||| | |||||| ||| |||| ||| |||| |||||||| |||||||||||||| Sbjct: 1303 ctccggttccaggagaagcttgtgggtggctcggccctggacgccaccggcgtgccgctc 1244 Query: 294 cccgacgagacgctcgcggcggcgcgggcctcggacgccatcctcctcggcgcgattgga 353 ||||||||||| |||| ||||| || || |||||| ||||||||||||| |||||| Sbjct: 1243 cccgacgagacactcgacgcggccaagggttccgacgccgtcctcctcggcgccattgga 1184 Query: 354 gggtataagtgggataacaatgagaagcatctcaagcc 391 || |||||||||||||||||||||||||| |||||||| Sbjct: 1183 ggctataagtgggataacaatgagaagcacctcaagcc 1146 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 caagccacgccgctcagaacccta 53 |||||||||||||||| ||||||| Sbjct: 1513 caagccacgccgctcaaaacccta 1490
>gb|AY108697.1| Zea mays PCO126508 mRNA sequence Length = 1558 Score = 194 bits (98), Expect = 2e-46 Identities = 233/278 (83%) Strand = Plus / Plus Query: 114 tgctccgccgcggccaggagctacagcattacgctcctccccggcgacggcatcggcccg 173 |||||||| ||||| |||||||||| ||| |||||| | || || ||||||||||||||| Sbjct: 186 tgctccgcggcggcgaggagctacaacatcacgctcttacctggggacggcatcggcccg 245 Query: 174 gaggtcgtcgccgtcgccaaggacgtcctctccgccgccggctccaaggaaggcgtggag 233 ||||| |||||||||||||||||||| || ||| |||||| || |||||||| ||| Sbjct: 246 gaggtggtcgccgtcgccaaggacgtgctatccttcgccggagccctcgaaggcgtcgag 305 Query: 234 ctccggtacaaggagatgctgatgggcggcgcggcgctggacgcggccggcgtgccgctc 293 ||||||| |||||| |||| |||||||| ||||||||||||| |||||||||| ||| Sbjct: 306 ctccggtttcaggagaagctggtgggcggctcggcgctggacgccaccggcgtgccactc 365 Query: 294 cccgacgagacgctcgcggcggcgcgggcctcggacgccatcctcctcggcgcgattgga 353 || ||||||||||||| | ||| || || ||||| | ||||||||||| |||||| Sbjct: 366 cctgacgagacgctcgacgaggccaagggttccgacgctgttctcctcggcgccattgga 425 Query: 354 gggtataagtgggataacaatgagaagcatctcaagcc 391 || ||||||||||||| |||||||||||| |||||||| Sbjct: 426 ggctataagtgggataccaatgagaagcacctcaagcc 463
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 244 aggagatgctgatgggcggcgcggcgctggacgcggccggcgtgccgctccccgacgaga 303 |||||| ||||||||||||||||||| |||| ||| ||||||||||||||| || |||| Sbjct: 2452 aggagaagctgatgggcggcgcggcggtggatgcgtacggcgtgccgctcccggaggaga 2393 Query: 304 cgctcgcggcggcgcgggcctcggacgccatcctcctcggcgcgattggagggt 357 ||||||||||||||| ||| ||||||||| ||||||||||||| || ||||||| Sbjct: 2392 cgctcgcggcggcgcaggcgtcggacgccgtcctcctcggcgccataggagggt 2339 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Minus Query: 129 aggagctacagcattacgctcctccccggcgacggcatcggcccggaggtcgtcgccgtc 188 |||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 2676 aggagctacaacgtcacgctcctccccggtgacggcatcggcccggaggtggtcgccgtc 2617 Query: 189 gccaaggacgtcctctccgccgccggc 215 |||||||||||||||||| ||||||| Sbjct: 2616 gccaaggacgtcctctccctcgccggc 2590 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 355 ggtataagtgggataacaatgagaagcatctcaagccagag 395 |||||||||||||||||||||||||||| |||||||||||| Sbjct: 2216 ggtataagtgggataacaatgagaagcacctcaagccagag 2176
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 244 aggagatgctgatgggcggcgcggcgctggacgcggccggcgtgccgctccccgacgaga 303 |||||| ||||||||||||||||||| |||| ||| ||||||||||||||| || |||| Sbjct: 25300256 aggagaagctgatgggcggcgcggcggtggatgcgtacggcgtgccgctcccggaggaga 25300315 Query: 304 cgctcgcggcggcgcgggcctcggacgccatcctcctcggcgcgattggagggt 357 ||||||||||||||| ||| ||||||||| ||||||||||||| || ||||||| Sbjct: 25300316 cgctcgcggcggcgcaggcgtcggacgccgtcctcctcggcgccataggagggt 25300369 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 129 aggagctacagcattacgctcctccccggcgacggcatcggcccggaggtcgtcgccgtc 188 |||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 25300032 aggagctacaacgtcacgctcctccccggtgacggcatcggcccggaggtggtcgccgtc 25300091 Query: 189 gccaaggacgtcctctccgccgccggc 215 |||||||||||||||||| ||||||| Sbjct: 25300092 gccaaggacgtcctctccctcgccggc 25300118 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 355 ggtataagtgggataacaatgagaagcatctcaagccagag 395 |||||||||||||||||||||||||||| |||||||||||| Sbjct: 25300492 ggtataagtgggataacaatgagaagcacctcaagccagag 25300532
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 244 aggagatgctgatgggcggcgcggcgctggacgcggccggcgtgccgctccccgacgaga 303 |||||| ||||||||||||||||||| |||| ||| ||||||||||||||| || |||| Sbjct: 143104 aggagaagctgatgggcggcgcggcggtggatgcgtacggcgtgccgctcccggaggaga 143045 Query: 304 cgctcgcggcggcgcgggcctcggacgccatcctcctcggcgcgattggagggt 357 ||||||||||||||| ||| ||||||||| ||||||||||||| || ||||||| Sbjct: 143044 cgctcgcggcggcgcaggcgtcggacgccgtcctcctcggcgccataggagggt 142991 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Minus Query: 129 aggagctacagcattacgctcctccccggcgacggcatcggcccggaggtcgtcgccgtc 188 |||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 143328 aggagctacaacgtcacgctcctccccggtgacggcatcggcccggaggtggtcgccgtc 143269 Query: 189 gccaaggacgtcctctccgccgccggc 215 |||||||||||||||||| ||||||| Sbjct: 143268 gccaaggacgtcctctccctcgccggc 143242 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 355 ggtataagtgggataacaatgagaagcatctcaagccagag 395 |||||||||||||||||||||||||||| |||||||||||| Sbjct: 142868 ggtataagtgggataacaatgagaagcacctcaagccagag 142828
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 244 aggagatgctgatgggcggcgcggcgctggacgcggccggcgtgccgctccccgacgaga 303 |||||| ||||||||||||||||||| |||| ||| ||||||||||||||| || |||| Sbjct: 25391565 aggagaagctgatgggcggcgcggcggtggatgcgtacggcgtgccgctcccggaggaga 25391624 Query: 304 cgctcgcggcggcgcgggcctcggacgccatcctcctcggcgcgattggagggt 357 ||||||||||||||| ||| ||||||||| ||||||||||||| || ||||||| Sbjct: 25391625 cgctcgcggcggcgcaggcgtcggacgccgtcctcctcggcgccataggagggt 25391678 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 129 aggagctacagcattacgctcctccccggcgacggcatcggcccggaggtcgtcgccgtc 188 |||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 25391341 aggagctacaacgtcacgctcctccccggtgacggcatcggcccggaggtggtcgccgtc 25391400 Query: 189 gccaaggacgtcctctccgccgccggc 215 |||||||||||||||||| ||||||| Sbjct: 25391401 gccaaggacgtcctctccctcgccggc 25391427 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 355 ggtataagtgggataacaatgagaagcatctcaagccagag 395 |||||||||||||||||||||||||||| |||||||||||| Sbjct: 25391801 ggtataagtgggataacaatgagaagcacctcaagccagag 25391841
>gb|S83229.1| leu2B=beta-isopropylmalate dehydrogenase [Aspergillus niger, strain A733, mRNA, 1364 nt] Length = 1364 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 148 tcctccccggcgacggcatcggcccggaggtc 179 |||| ||||||||||||||||||||||||||| Sbjct: 71 tccttcccggcgacggcatcggcccggaggtc 102
>dbj|AK110632.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-B12, full insert sequence Length = 1241 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 148 tcctccccggcgacggcatcggcccggaggtcgtcg 183 |||||||||| |||||||||||||| |||||||||| Sbjct: 52 tcctccccggtgacggcatcggccccgaggtcgtcg 87
>gb|U51131.1|ANU51131 Aspergillus niger beta-isopropylmalate dehydrogenase (leu2B) mRNA, complete cds Length = 1364 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 148 tcctccccggcgacggcatcggcccggaggtc 179 |||| ||||||||||||||||||||||||||| Sbjct: 71 tccttcccggcgacggcatcggcccggaggtc 102
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 151 tccccggcgacggcatcggcccggaggtcgt 181 |||||||||||||||||||||| |||||||| Sbjct: 705293 tccccggcgacggcatcggccccgaggtcgt 705263
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 153 cccggcgacggcatcggcccggaggt 178 |||||||||||||||||||||||||| Sbjct: 2656217 cccggcgacggcatcggcccggaggt 2656242 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cccggcgacggcatcggccc 172 |||||||||||||||||||| Sbjct: 2080953 cccggcgacggcatcggccc 2080934
>emb|AJ571689.1|HVO571689 Haloferax volcanii 3-isopropylmalate dehydratase operon (leuCDB genes) Length = 5564 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 151 tccccggcgacggcatcggcccggaggtc 179 |||||||||||||||||||| |||||||| Sbjct: 3028 tccccggcgacggcatcggcgcggaggtc 3056
>emb|AJ279020.1|CRU279020 Candida rugosa leu2 gene, oat gene (partial) and gene for SPL1 tRNA splicing protein (partial) Length = 1600 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 280 ccggcgtgccgctccccgacgagacgctcgcggcggc 316 ||||||||||||| ||||||||| |||||| |||||| Sbjct: 367 ccggcgtgccgcttcccgacgaggcgctcgaggcggc 403
>gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of the complete genome Length = 14034 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 147 ctcctccccggcgacggcatcggcccgga 175 ||||| ||||||||||||||||||||||| Sbjct: 1166 ctcctgcccggcgacggcatcggcccgga 1138
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| |||||||||||||||||||| ||||| Sbjct: 3949512 ctcctgcccggcgacggcatcggccccgaggt 3949481 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gcggcgctggacgcggccggcg 285 |||||||||||||||||||||| Sbjct: 4372752 gcggcgctggacgcggccggcg 4372773
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 151 tccccggcgacggcatcggcccggaggtcgtcgccg 186 ||||||| ||||||||||||| ||||||||| |||| Sbjct: 34287 tccccggtgacggcatcggccaggaggtcgtggccg 34322
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 150 ctccccggcgacggcatcggcccggagg 177 ||||||||||||||||||||||| |||| Sbjct: 3491711 ctccccggcgacggcatcggccccgagg 3491684
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 gctcgcggcggcgcgggcctcggacgc 331 |||||||||||||||||| |||||||| Sbjct: 884116 gctcgcggcggcgcgggcatcggacgc 884142 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 248 gatgctgatgggcggcgcggcgctggacgcggccggc 284 ||||||| |||||||||||||| || |||||||||| Sbjct: 2629946 gatgctggtgggcggcgcggcggcggtcgcggccggc 2629982 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgcggcgctggacgcggccg 282 |||||||||||||||||||| Sbjct: 2271783 cgcggcgctggacgcggccg 2271764
>gb|AE012450.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 358 of 460 of the complete genome Length = 11329 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 153 cccggcgacggcatcggcccgga 175 ||||||||||||||||||||||| Sbjct: 8242 cccggcgacggcatcggcccgga 8220
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 cccggcgacggcatcggcccgga 175 ||||||||||||||||||||||| Sbjct: 1005113 cccggcgacggcatcggcccgga 1005135 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 260 cggcgcggcgctggacgcggccggcgtg 287 ||||||||||||| ||| |||||||||| Sbjct: 573602 cggcgcggcgctgtacgtggccggcgtg 573629
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 264 gcggcgctggacgcggccggcgtgccg 290 |||||||||||||||||||||| |||| Sbjct: 4359421 gcggcgctggacgcggccggcgcgccg 4359447 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 tgggcggcgcggcgctggacg 276 ||||||||||||||||||||| Sbjct: 1461915 tgggcggcgcggcgctggacg 1461935 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgcggccggcgtgccgctcc 294 |||||||||||||||||||| Sbjct: 2749230 cgcggccggcgtgccgctcc 2749249 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 263 cgcggcgctggacgcggccggcgtgccg 290 |||||||||||| | ||||||||||||| Sbjct: 1339814 cgcggcgctggaggaggccggcgtgccg 1339787 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 gcggcgctggacgcggccggcgtg 287 |||||||| ||||||||||||||| Sbjct: 635048 gcggcgctcgacgcggccggcgtg 635025
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome Length = 1469720 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 153 cccggcgacggcatcggcccggaggt 178 ||||| |||||||||||||||||||| Sbjct: 755459 cccggtgacggcatcggcccggaggt 755434
>ref|NM_106704.2| Arabidopsis thaliana 3-isopropylmalate dehydrogenase/ oxidoreductase AT1G80560 mRNA, complete cds Length = 1432 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 348 attggagggtataagtgggataacaatgagaagcatct 385 ||||||||||| || |||||||||||||| || ||||| Sbjct: 383 attggagggtacaaatgggataacaatgaaaaacatct 420 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| ||||| ||||||||||| |||||||| Sbjct: 182 ctccttcccggagacggcatcggtccggaggt 213
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 282 ggcgtgccgctccccgacgagacgct 307 ||||||||||| |||||||||||||| Sbjct: 2757506 ggcgtgccgcttcccgacgagacgct 2757481
>ref|XM_545569.2| PREDICTED: Canis familiaris similar to NGFI-A binding protein 1 (LOC488447), mRNA Length = 2309 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 257 gggcggcgcggcgctggacgcggccg 282 |||||||| ||||||||||||||||| Sbjct: 909 gggcggcgaggcgctggacgcggccg 934
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 cggcgacggcatcggcccggag 176 |||||||||||||||||||||| Sbjct: 1207666 cggcgacggcatcggcccggag 1207687 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 cccggcgacggcatcggcccggag 176 ||||||||||| |||||||||||| Sbjct: 4115641 cccggcgacgggatcggcccggag 4115618
>gb|CP000320.1| Nitrobacter hamburgensis X14 plasmid 1, complete sequence Length = 294829 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gcggcgctggacgcggccggcg 285 |||||||||||||||||||||| Sbjct: 187353 gcggcgctggacgcggccggcg 187374
>emb|Y10216.1|ATIMDH A.thaliana mRNA for hypothetical 3-isopropylmalate dehydrogenase Length = 1457 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 348 attggagggtataagtgggataacaatgagaagcatct 385 ||||||||||| || |||||||||||||| || ||||| Sbjct: 383 attggagggtacaaatgggataacaatgaaaaacatct 420 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| ||||| ||||||||||| |||||||| Sbjct: 182 ctccttcccggagacggcatcggtccggaggt 213
>gb|AY114627.1| Arabidopsis thaliana putative 3-isopropylmalate dehydrogenase (At1g80560) mRNA, complete cds Length = 1356 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 348 attggagggtataagtgggataacaatgagaagcatct 385 ||||||||||| || |||||||||||||| || ||||| Sbjct: 340 attggagggtacaaatgggataacaatgaaaaacatct 377 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| ||||| ||||||||||| |||||||| Sbjct: 139 ctccttcccggagacggcatcggtccggaggt 170
>gb|AE011734.1| Xanthomonas axonopodis pv. citri str. 306, section 112 of 469 of the complete genome Length = 10516 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 cggcgacggcatcggcccggag 176 |||||||||||||||||||||| Sbjct: 7354 cggcgacggcatcggcccggag 7375
>gb|AY062441.1| Arabidopsis thaliana putative 3-isopropylmalate dehydrogenase (At1g80560; T21F11.11) mRNA, complete cds Length = 1406 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 348 attggagggtataagtgggataacaatgagaagcatct 385 ||||||||||| || |||||||||||||| || ||||| Sbjct: 361 attggagggtacaaatgggataacaatgaaaaacatct 398 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| ||||| ||||||||||| |||||||| Sbjct: 160 ctccttcccggagacggcatcggtccggaggt 191
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 302 gacgctcgcggcggcgcgggcctcgg 327 ||||||||||||||||| |||||||| Sbjct: 4328106 gacgctcgcggcggcgccggcctcgg 4328131 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 tcggcccggaggtcgtcgccgtcg 189 |||||||| ||||||||||||||| Sbjct: 4438752 tcggcccgaaggtcgtcgccgtcg 4438729 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tccccggcgacggcatcggc 170 |||||||||||||||||||| Sbjct: 4162553 tccccggcgacggcatcggc 4162534
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 151 tccccggcgacggcatcggccc 172 |||||||||||||||||||||| Sbjct: 617573 tccccggcgacggcatcggccc 617552
>emb|BX815110.1|CNS0ABD5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS33ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 348 attggagggtataagtgggataacaatgagaagcatct 385 ||||||||||| || |||||||||||||| || ||||| Sbjct: 361 attggagggtacaaatgggataacaatgaaaaacatct 398 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| ||||| ||||||||||| |||||||| Sbjct: 160 ctccttcccggagacggcatcggtccggaggt 191
>gb|AY085451.1| Arabidopsis thaliana clone 152141 mRNA, complete sequence Length = 1420 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 348 attggagggtataagtgggataacaatgagaagcatct 385 ||||||||||| || |||||||||||||| || ||||| Sbjct: 378 attggagggtacaaatgggataacaatgaaaaacatct 415 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| ||||| ||||||||||| |||||||| Sbjct: 177 ctccttcccggagacggcatcggtccggaggt 208
>ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa8521 predicted mRNA Length = 1089 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 144 acgctcctccccggcgacggcatcggcccggag 176 |||||| |||| |||||||||||||| |||||| Sbjct: 103 acgctcttcccaggcgacggcatcgggccggag 135
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 tccccggcgacggcatcggcc 171 ||||||||||||||||||||| Sbjct: 3579141 tccccggcgacggcatcggcc 3579161 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gacgcggccggcgtgccgct 292 |||||||||||||||||||| Sbjct: 1650925 gacgcggccggcgtgccgct 1650906
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 148 tcctccccggcgacggcatcggccc 172 ||||| ||||||||||||||||||| Sbjct: 2610595 tcctcgccggcgacggcatcggccc 2610571
>emb|CR700142.2|CNS0G36I Tetraodon nigroviridis full-length cDNA Length = 1388 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 428 ggcctcggacgccatcctcct 408
>emb|CR723641.2|CNS0GLB3 Tetraodon nigroviridis full-length cDNA Length = 1381 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 429 ggcctcggacgccatcctcct 409
>emb|CR703684.2|CNS0G5WW Tetraodon nigroviridis full-length cDNA Length = 1366 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 410 ggcctcggacgccatcctcct 390
>emb|CR703144.2|CNS0G5HW Tetraodon nigroviridis full-length cDNA Length = 1389 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 427 ggcctcggacgccatcctcct 407
>emb|CR702340.2|CNS0G4VK Tetraodon nigroviridis full-length cDNA Length = 825 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 164 ggcctcggacgccatcctcct 144
>emb|CR701704.2|CNS0G4DW Tetraodon nigroviridis full-length cDNA Length = 1314 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 366 ggcctcggacgccatcctcct 346
>emb|CR699764.2|CNS0G2W0 Tetraodon nigroviridis full-length cDNA Length = 1341 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 411 ggcctcggacgccatcctcct 391
>emb|CR700167.2|CNS0G377 Tetraodon nigroviridis full-length cDNA Length = 1354 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 396 ggcctcggacgccatcctcct 376
>emb|CR699297.2|CNS0G2J1 Tetraodon nigroviridis full-length cDNA Length = 1371 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 412 ggcctcggacgccatcctcct 392
>emb|CR697691.2|CNS0G1AF Tetraodon nigroviridis full-length cDNA Length = 1357 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 407 ggcctcggacgccatcctcct 387
>emb|CR695344.2|CNS0FZH8 Tetraodon nigroviridis full-length cDNA Length = 1369 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 413 ggcctcggacgccatcctcct 393
>emb|CR694255.2|CNS0FYMZ Tetraodon nigroviridis full-length cDNA Length = 1351 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 409 ggcctcggacgccatcctcct 389
>emb|CR693913.2|CNS0FYDH Tetraodon nigroviridis full-length cDNA Length = 1377 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 420 ggcctcggacgccatcctcct 400
>emb|CR693143.2|CNS0FXS3 Tetraodon nigroviridis full-length cDNA Length = 1266 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 312 ggcctcggacgccatcctcct 292
>emb|CR692315.2|CNS0FX53 Tetraodon nigroviridis full-length cDNA Length = 1367 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 411 ggcctcggacgccatcctcct 391
>emb|CR685837.2|CNS0FS55 Tetraodon nigroviridis full-length cDNA Length = 1361 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 412 ggcctcggacgccatcctcct 392
>emb|CR690594.2|CNS0FVTA Tetraodon nigroviridis full-length cDNA Length = 1357 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 408 ggcctcggacgccatcctcct 388
>emb|CR688394.2|CNS0FU46 Tetraodon nigroviridis full-length cDNA Length = 1148 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 435 ggcctcggacgccatcctcct 415
>emb|CR688290.2|CNS0FU1A Tetraodon nigroviridis full-length cDNA Length = 1366 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 408 ggcctcggacgccatcctcct 388
>emb|CR689993.2|CNS0FVCL Tetraodon nigroviridis full-length cDNA Length = 1357 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 403 ggcctcggacgccatcctcct 383
>emb|CR689721.2|CNS0FV51 Tetraodon nigroviridis full-length cDNA Length = 1360 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 413 ggcctcggacgccatcctcct 393
>emb|CR689410.2|CNS0FUWE Tetraodon nigroviridis full-length cDNA Length = 1392 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 437 ggcctcggacgccatcctcct 417
>emb|CR687590.2|CNS0FTHU Tetraodon nigroviridis full-length cDNA Length = 1358 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 408 ggcctcggacgccatcctcct 388
>emb|CR686213.2|CNS0FSFL Tetraodon nigroviridis full-length cDNA Length = 1362 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 409 ggcctcggacgccatcctcct 389
>emb|CR684454.2|CNS0FR2Q Tetraodon nigroviridis full-length cDNA Length = 1380 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 421 ggcctcggacgccatcctcct 401
>emb|CR684725.1|CNS0FRA9 Tetraodon nigroviridis full-length cDNA Length = 1370 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 419 ggcctcggacgccatcctcct 399
>emb|CR682021.2|CNS0FP75 Tetraodon nigroviridis full-length cDNA Length = 1338 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 411 ggcctcggacgccatcctcct 391
>emb|CR684174.2|CNS0FQUY Tetraodon nigroviridis full-length cDNA Length = 1291 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 361 ggcctcggacgccatcctcct 341
>emb|CR681812.2|CNS0FP1C Tetraodon nigroviridis full-length cDNA Length = 1374 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 422 ggcctcggacgccatcctcct 402
>emb|CR677918.2|CNS0FM1I Tetraodon nigroviridis full-length cDNA Length = 1366 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 412 ggcctcggacgccatcctcct 392
>emb|CR670600.1|CNS0FGEM Tetraodon nigroviridis full-length cDNA Length = 1356 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 411 ggcctcggacgccatcctcct 391
>emb|CR666282.2|CNS0FD2O Tetraodon nigroviridis full-length cDNA Length = 1355 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 411 ggcctcggacgccatcctcct 391
>emb|CR663171.2|CNS0FAO9 Tetraodon nigroviridis full-length cDNA Length = 1361 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 422 ggcctcggacgccatcctcct 402
>emb|CR661828.2|CNS0F9MY Tetraodon nigroviridis full-length cDNA Length = 1361 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 416 ggcctcggacgccatcctcct 396
>emb|CR643591.2|CNS0EVKD Tetraodon nigroviridis full-length cDNA Length = 1354 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 422 ggcctcggacgccatcctcct 402
>emb|CR637472.2|CNS0EQUE Tetraodon nigroviridis full-length cDNA Length = 1402 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ggcctcggacgccatcctcct 340 ||||||||||||||||||||| Sbjct: 444 ggcctcggacgccatcctcct 424
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 ctccccggcgacggcatcggc 170 ||||||||||||||||||||| Sbjct: 564717 ctccccggcgacggcatcggc 564737
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 cggcgtgccgctccccgacga 301 ||||||||||||||||||||| Sbjct: 1882381 cggcgtgccgctccccgacga 1882401 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gcgcggcgctggacgcggcc 281 |||||||||||||||||||| Sbjct: 2328094 gcgcggcgctggacgcggcc 2328075
>gb|BT009074.1| Triticum aestivum clone wip1c.pk004.i22:fis, full insert mRNA sequence Length = 1601 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cctctccgccgccggctccaa 220 ||||||||||||||||||||| Sbjct: 23 cctctccgccgccggctccaa 43
>emb|Z99263.1|MLCB637 Mycobacterium leprae cosmid B637 Length = 44882 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 156 ggcgacggcatcggcccggaggtcgtcgc 184 |||||||| |||||||||||||| ||||| Sbjct: 29819 ggcgacgggatcggcccggaggtggtcgc 29847
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 tgggcggcgcggcgctggacg 276 ||||||||||||||||||||| Sbjct: 41572 tgggcggcgcggcgctggacg 41552 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 tgctgatgggcggcgcggcgctgg 273 ||||| |||||||||||||||||| Sbjct: 61092 tgctgctgggcggcgcggcgctgg 61115
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 tgggcggcgcggcgctggacg 276 ||||||||||||||||||||| Sbjct: 305450 tgggcggcgcggcgctggacg 305430 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 tgctgatgggcggcgcggcgctgg 273 ||||| |||||||||||||||||| Sbjct: 324983 tgctgctgggcggcgcggcgctgg 325006
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 tgggcggcgcggcgctggacg 276 ||||||||||||||||||||| Sbjct: 276512 tgggcggcgcggcgctggacg 276492
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gcgcggcgctggacgcggccg 282 ||||||||||||||||||||| Sbjct: 264161 gcgcggcgctggacgcggccg 264141
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 tcctccccggcgacggcatcggccc 172 ||||||||||||| ||||||||||| Sbjct: 173313 tcctccccggcgatggcatcggccc 173337
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 ctccccggcgacggcatcggc 170 ||||||||||||||||||||| Sbjct: 252731 ctccccggcgacggcatcggc 252751
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 248 gatgctgatgggcggcgcggcgctggacgcggccggc 284 ||||||| |||||||||||||| || |||||||||| Sbjct: 809982 gatgctggtgggcggcgcggcggcggtcgcggccggc 810018 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgcggcgctggacgcggccg 282 |||||||||||||||||||| Sbjct: 433173 cgcggcgctggacgcggccg 433154
>emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete genome; segment 7/10 Length = 348950 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 156 ggcgacggcatcggcccggaggtcgtcgc 184 |||||||| |||||||||||||| ||||| Sbjct: 39194 ggcgacgggatcggcccggaggtggtcgc 39166
>dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mRNA for NAD-dependent isocitrate dehydrogenase a, complete cds Length = 1424 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 144 acgctcctccccggcgacggcatcggcccggag 176 |||||| |||| |||||||||||||| |||||| Sbjct: 229 acgctcttcccaggcgacggcatcgggccggag 261
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 cgcggcggcgcgggcctcgga 328 ||||||||||||||||||||| Sbjct: 18646191 cgcggcggcgcgggcctcgga 18646211
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 144 acgctcctccccggcgacggcatcggcccggag 176 |||||| |||| |||||||||||||| |||||| Sbjct: 9664930 acgctcttcccaggcgacggcatcgggccggag 9664962 Score = 40.1 bits (20), Expect = 5.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 254 gatgggcggcgcggcgctggacgcggccggcg 285 |||||||||| |||||| |||||||||||||| Sbjct: 41455609 gatgggcggcacggcgc-ggacgcggccggcg 41455579 Score = 40.1 bits (20), Expect = 5.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 254 gatgggcggcgcggcgctggacgcggccggcg 285 |||||||||| |||||| |||||||||||||| Sbjct: 41400119 gatgggcggcacggcgc-ggacgcggccggcg 41400089
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 ggcgctggacgcggccggcgtgccg 290 ||||||||| ||||||||||||||| Sbjct: 1987920 ggcgctggaagcggccggcgtgccg 1987896
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 260 cggcgcggcgctggacgcggccggc 284 |||||||||||||||||||| |||| Sbjct: 107691 cggcgcggcgctggacgcgggcggc 107715
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 153 cccggcgacggcatcggcccggaggtcgt 181 ||||| ||||||||||||| ||||||||| Sbjct: 3335619 cccggtgacggcatcggccaggaggtcgt 3335591 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 168 ggcccggaggtcgtcgccgtcgccaaggacgtcctc 203 ||||||| ||||||||||| |||| || |||||||| Sbjct: 8504257 ggcccggcggtcgtcgccgacgccgagcacgtcctc 8504292
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 144 acgctcctccccggcgacggcatcggcccggag 176 |||||| |||| |||||||||||||| |||||| Sbjct: 102933 acgctcttcccaggcgacggcatcgggccggag 102965
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 tccccggcgacggcatcggcccggaggtc 179 |||||| ||||||||||||||| |||||| Sbjct: 7236414 tccccgccgacggcatcggccccgaggtc 7236442 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 150 ctccccggcgacggcatcggcccggaggt 178 |||||||||||||| |||||||| ||||| Sbjct: 540647 ctccccggcgacggtatcggccccgaggt 540619 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tccccggcgacggcatcggc 170 |||||||||||||||||||| Sbjct: 3209435 tccccggcgacggcatcggc 3209454
>dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D11, full insert sequence Length = 1522 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 144 acgctcctccccggcgacggcatcggcccggag 176 |||||| |||| |||||||||||||| |||||| Sbjct: 243 acgctcttcccaggcgacggcatcgggccggag 275
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 gcgcggcgctggacgcggccg 282 ||||||||||||||||||||| Sbjct: 3236703 gcgcggcgctggacgcggccg 3236723 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 gctgatgggcggcgcggcgct 271 ||||||||||||||||||||| Sbjct: 1339941 gctgatgggcggcgcggcgct 1339921 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcgcggcgctggacgc 277 |||||||||||||||||||| Sbjct: 3087494 ggcggcgcggcgctggacgc 3087513
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 cgcggcggcgcgggcctcgga 328 ||||||||||||||||||||| Sbjct: 18572417 cgcggcggcgcgggcctcgga 18572437
>emb|AL845345.9|CNS08CB7 Oryza sativa chromosome 12, . BAC OSJNBa0023G11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 180599 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 cgcggcggcgcgggcctcgga 328 ||||||||||||||||||||| Sbjct: 79643 cgcggcggcgcgggcctcgga 79663
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 acgctcgcggcggcgcgggc 322 |||||||||||||||||||| Sbjct: 2518258 acgctcgcggcggcgcgggc 2518239
>ref|NM_189737.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 690 Score = 40.1 bits (20), Expect = 5.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 254 gatgggcggcgcggcgctggacgcggccggcg 285 |||||||||| |||||| |||||||||||||| Sbjct: 219 gatgggcggcacggcgc-ggacgcggccggcg 249
>ref|NM_189729.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 654 Score = 40.1 bits (20), Expect = 5.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 254 gatgggcggcgcggcgctggacgcggccggcg 285 |||||||||| |||||| |||||||||||||| Sbjct: 219 gatgggcggcacggcgc-ggacgcggccggcg 249
>gb|AF172282.1| Oryza sativa adh1-adh2 region Length = 339485 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcggcgcggcgctggacgc 277 |||||||||||||||||||| Sbjct: 234686 ggcggcgcggcgctggacgc 234667
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 151 tccccggcgacggcatcggcccggaggt 178 ||||||||||||| |||||||| ||||| Sbjct: 10405 tccccggcgacgggatcggccccgaggt 10432
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 cggcgcggcgctggacgcggccgg 283 ||||||||||||||| |||||||| Sbjct: 1817439 cggcgcggcgctggaggcggccgg 1817416
>ref|XM_864778.1| PREDICTED: Bos taurus similar to high-mobility group box 3 (LOC613729), mRNA Length = 1285 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cgctcgcggcggcgcgggcc 323 |||||||||||||||||||| Sbjct: 589 cgctcgcggcggcgcgggcc 570
>ref|XM_370032.1| Magnaporthe grisea 70-15 hypothetical protein (MG06547.4) partial mRNA Length = 1212 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gacggcatcggcccggaggt 178 |||||||||||||||||||| Sbjct: 163 gacggcatcggcccggaggt 182
>gb|AY657352.1| Synthetic construct Peudomonas aeruginosa clone FLH042965.01F PA5144 gene, partial cds Length = 399 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cggcgcggcgctggacgcggccgg 283 |||||||||||||| ||||||||| Sbjct: 108 cggcgcggcgctggtcgcggccgg 131
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cccggcgacggcatcggccc 172 |||||||||||||||||||| Sbjct: 4775637 cccggcgacggcatcggccc 4775656
>gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051P13, complete sequence Length = 142241 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcgcggcgctggacgc 277 |||||||||||||||||||| Sbjct: 101631 ggcggcgcggcgctggacgc 101650
>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22, complete sequence Length = 156725 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tcctctccgccgccggctcc 218 |||||||||||||||||||| Sbjct: 99673 tcctctccgccgccggctcc 99654
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12 Length = 273785 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ggcgacggcatcggcccgga 175 |||||||||||||||||||| Sbjct: 231462 ggcgacggcatcggcccgga 231481 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ccgccgccggctccaaggaaggcg 228 |||||||||||| ||||||||||| Sbjct: 116961 ccgccgccggctacaaggaaggcg 116938
>gb|AC146050.3| Pan troglodytes BAC clone RP43-72L14 from 7, complete sequence Length = 154653 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggccaggagctacagcatta 144 |||||||||||||||||||| Sbjct: 27014 ggccaggagctacagcatta 26995
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ggcggcgcggcgctggacgcggcc 281 ||||||||||||||||||| |||| Sbjct: 4990229 ggcggcgcggcgctggacgtggcc 4990252
>emb|AL353689.26| Human DNA sequence from clone RP5-1087E8 on chromosome 1q42.11-42.2 Contains the CABC1 gene for chaperone ABC1 activity of bc1 complex like (S. pombe), a pseudogene similar to part of NADH dehydrogenase subunit 6 (ND6), a novel gene, the 3' end of the CDC42BPA gene for CDC42 binding protein kinase alpha (DMPK-like) and two CpG islands, complete sequence Length = 195829 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 tataagtgggataacaatgagaag 380 ||||||||||||||||| |||||| Sbjct: 139440 tataagtgggataacaaagagaag 139417
>emb|Y11280.1|AVLEBIO A.vinelandii yoh-1, ibpB, cynR, leuC, leuD, leuB, asd, usg-1 genes Length = 8784 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ggcgacggcatcggcccgga 175 |||||||||||||||||||| Sbjct: 5389 ggcgacggcatcggcccgga 5408
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 tgctgatgggcggcgcggcgctgg 273 ||||| |||||||||||||||||| Sbjct: 157177 tgctgctgggcggcgcggcgctgg 157154
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gccgctccccgacgagacgc 306 |||||||||||||||||||| Sbjct: 71360 gccgctccccgacgagacgc 71341
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 cggcgcggcgctggacgcggccgg 283 |||||||||||||| ||||||||| Sbjct: 3006835 cggcgcggcgctggccgcggccgg 3006812
>gb|AC114478.2| Homo sapiens chromosome 3 clone RP11-333K5, complete sequence Length = 158276 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gatgactcagctccaagcca 36 |||||||||||||||||||| Sbjct: 151211 gatgactcagctccaagcca 151230
>gb|AE012144.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 52 of 460 of the complete genome Length = 10816 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 260 cggcgcggcgctggacgcggccggcgtg 287 ||||||||||||| ||| |||||||||| Sbjct: 10581 cggcgcggcgctgtacgtggccggcgtg 10608
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gcgcggcgctggacgcggccggcg 285 ||||||||||||| |||||||||| Sbjct: 5389750 gcgcggcgctggaggcggccggcg 5389727
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgcggcgctggacgcggccg 282 |||||||||||||||||||| Sbjct: 1555259 cgcggcgctggacgcggccg 1555278
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tcctctccgccgccggctcc 218 |||||||||||||||||||| Sbjct: 16784111 tcctctccgccgccggctcc 16784092 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcgcggcgctggacgc 277 |||||||||||||||||||| Sbjct: 5441090 ggcggcgcggcgctggacgc 5441109
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cggcgacggcatcggcccgg 174 |||||||||||||||||||| Sbjct: 7595844 cggcgacggcatcggcccgg 7595863
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggcggcgcggcgctggacg 276 |||||||||||||||||||| Sbjct: 23969943 gggcggcgcggcgctggacg 23969962
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cgccgtcgccaaggacgtcc 201 |||||||||||||||||||| Sbjct: 4288603 cgccgtcgccaaggacgtcc 4288584
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| ||||| ||||||||||| |||||||| Sbjct: 115491 ctccttcccggagacggcatcggtccggaggt 115522
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 40.1 bits (20), Expect = 5.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 254 gatgggcggcgcggcgctggacgcggccggcg 285 |||||||||| |||||| |||||||||||||| Sbjct: 147102 gatgggcggcacggcgc-ggacgcggccggcg 147072 Score = 40.1 bits (20), Expect = 5.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 254 gatgggcggcgcggcgctggacgcggccggcg 285 |||||||||| |||||| |||||||||||||| Sbjct: 91612 gatgggcggcacggcgc-ggacgcggccggcg 91582
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 40.1 bits (20), Expect = 5.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 254 gatgggcggcgcggcgctggacgcggccggcg 285 |||||||||| |||||| |||||||||||||| Sbjct: 11902 gatgggcggcacggcgc-ggacgcggccggcg 11872
>gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21F11 genomic sequence, complete sequence Length = 89811 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 147 ctcctccccggcgacggcatcggcccggaggt 178 ||||| ||||| ||||||||||| |||||||| Sbjct: 30659 ctccttcccggagacggcatcggtccggaggt 30628
>gb|AC116620.6| Homo sapiens BAC clone RP11-261I22 from 2, complete sequence Length = 62301 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 acaatgagaagcatctcaagccag 393 |||||||||||||||||| ||||| Sbjct: 7674 acaatgagaagcatctcacgccag 7651
>gb|AE004927.1| Pseudomonas aeruginosa PAO1, section 488 of 529 of the complete genome Length = 11786 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cggcgcggcgctggacgcggccgg 283 |||||||||||||| ||||||||| Sbjct: 5197 cggcgcggcgctggtcgcggccgg 5220
>gb|AC008176.3|AC008176 Homo sapiens BAC clone RP11-451F11 from 7p11.2-p21, complete sequence Length = 90180 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggccaggagctacagcatta 144 |||||||||||||||||||| Sbjct: 81697 ggccaggagctacagcatta 81678
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccgccgccggctccaaggaa 224 |||||||||||||||||||| Sbjct: 1528170 ccgccgccggctccaaggaa 1528189
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cgccgtcgccaaggacgtcc 201 |||||||||||||||||||| Sbjct: 105417 cgccgtcgccaaggacgtcc 105398
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 151 tccccggcgacggcatcggcccggaggtcgtcgccg 186 ||||||| ||||||||||| || |||||| |||||| Sbjct: 4371168 tccccggtgacggcatcggtcccgaggtcatcgccg 4371133 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 cgcggcggcgcgggcctcgg 327 |||||||||||||||||||| Sbjct: 1147413 cgcggcggcgcgggcctcgg 1147394
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggcggcgcggcgctggacg 276 |||||||||||||||||||| Sbjct: 99554 gggcggcgcggcgctggacg 99573
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 40.1 bits (20), Expect = 5.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 254 gatgggcggcgcggcgctggacgcggccggcg 285 |||||||||| |||||| |||||||||||||| Sbjct: 23808 gatgggcggcacggcgc-ggacgcggccggcg 23778
>dbj|AP005916.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066M12 Length = 162198 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cggcgacggcatcggcccgg 174 |||||||||||||||||||| Sbjct: 104259 cggcgacggcatcggcccgg 104278
>emb|BX571732.6| Zebrafish DNA sequence from clone DKEY-49H7 in linkage group 20, complete sequence Length = 87077 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gataacaatgagaagcatct 385 |||||||||||||||||||| Sbjct: 76971 gataacaatgagaagcatct 76952
>dbj|AK119941.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-B07, full insert sequence Length = 867 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cgccgtcgccaaggacgtcc 201 |||||||||||||||||||| Sbjct: 224 cgccgtcgccaaggacgtcc 243
>dbj|AK119333.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-B12, full insert sequence Length = 2846 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcgcggcgctggacgc 277 |||||||||||||||||||| Sbjct: 302 ggcggcgcggcgctggacgc 321
>dbj|AK109818.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A03, full insert sequence Length = 1411 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcgcggcgctggacgc 277 |||||||||||||||||||| Sbjct: 330 ggcggcgcggcgctggacgc 349
>emb|AL445886.3|CNS07EET Human chromosome 14 DNA sequence BAC R-369B6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167398 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gatgactcagctccaagcca 36 |||||||||||||||||||| Sbjct: 76155 gatgactcagctccaagcca 76174
>dbj|AK066754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G14, full insert sequence Length = 1797 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gggcggcgcggcgctggacg 276 |||||||||||||||||||| Sbjct: 1441 gggcggcgcggcgctggacg 1460
>emb|BX005096.8| Zebrafish DNA sequence from clone CH211-132F13 in linkage group 20, complete sequence Length = 162987 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 gataacaatgagaagcatct 385 |||||||||||||||||||| Sbjct: 96560 gataacaatgagaagcatct 96579
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ggcgacggcatcggcccgga 175 |||||||||||||||||||| Sbjct: 126466 ggcgacggcatcggcccgga 126447
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cggcgcggcgctggacgcggccgg 283 ||||||||||| |||||||||||| Sbjct: 2841493 cggcgcggcgccggacgcggccgg 2841516 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 gacgctcgcggcggcgcggg 321 |||||||||||||||||||| Sbjct: 2790540 gacgctcgcggcggcgcggg 2790559
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cggcgacggcatcggcccggaggt 178 ||||||||| |||||||||||||| Sbjct: 3373683 cggcgacgggatcggcccggaggt 3373660
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 cgcggcggcgcgggcctcgg 327 |||||||||||||||||||| Sbjct: 2280274 cgcggcggcgcgggcctcgg 2280255 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cccggcgacggcatcggccc 172 |||||||||||||||||||| Sbjct: 1813298 cccggcgacggcatcggccc 1813317 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gctcgcggcggcgcgggcct 324 |||||||||||||||||||| Sbjct: 635966 gctcgcggcggcgcgggcct 635947
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tcctctccgccgccggctcc 218 |||||||||||||||||||| Sbjct: 16877881 tcctctccgccgccggctcc 16877862 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggcggcgcggcgctggacgc 277 |||||||||||||||||||| Sbjct: 5507567 ggcggcgcggcgctggacgc 5507586
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cggcatcggcccggaggtcg 180 |||||||||||||||||||| Sbjct: 1886550 cggcatcggcccggaggtcg 1886531
>gb|AC170421.7| Rhesus Macaque 14 BAC CH250-340G19 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 169902 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gatgactcagctccaagcca 36 |||||||||||||||||||| Sbjct: 101635 gatgactcagctccaagcca 101616
>emb|AL163953.3|CNS05TBQ Human chromosome 14 DNA sequence BAC R-533L7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162986 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gatgactcagctccaagcca 36 |||||||||||||||||||| Sbjct: 119958 gatgactcagctccaagcca 119977
>dbj|D10700.1|TTHLEUBA Thermus aquaticus gene for threo-D-3-isopropylmalate dehydrogenase alpha-2 subunit, complete cds Length = 1488 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 148 tcctccccggcgacggcatcggcccggaggtc 179 |||| ||||| |||||||||||||| |||||| Sbjct: 302 tcctgcccggggacggcatcggccccgaggtc 333 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,638,687 Number of Sequences: 3902068 Number of extensions: 2638687 Number of successful extensions: 69808 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 62380 Number of HSP's gapped (non-prelim): 7465 length of query: 395 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 373 effective length of database: 17,147,199,772 effective search space: 6395905514956 effective search space used: 6395905514956 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
