ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50g10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474042.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 115 gggaccatctacttccccatcaccgacgaccccccggagccg 156 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 279 acgaggaggaggacgtcaccaagctgctcgagccgctctcccgggagcagctcgtggcgc 338 |||| ||||||||| || | |||||||||||||| || || ||||||||||| ||||||| Sbjct: 203 acgatgaggaggacatcgcgaagctgctcgagcccctgtcgcgggagcagctggtggcgc 262 Query: 339 t 339 | Sbjct: 263 t 263 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 89 atggcgccgaagaagcggaaggcggatccggcgg 122 ||||| ||||||||||| |||||||||||||||| Sbjct: 1 atggctccgaagaagcgaaaggcggatccggcgg 34
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 122261 gggaccatctacttccccatcaccgacgaccccccggagccg 122302
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Minus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 42996 gggaccatctacttccccatcaccgacgaccccccggagccg 42955 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 86 cccatggcgccgaagaagcggaaggcggatccggcgg 122 |||||||| ||||||||||| |||||||||||||||| Sbjct: 43113 cccatggctccgaagaagcgaaaggcggatccggcgg 43077 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 279 acgaggaggaggacgtcaccaagctgctcgagccgctctcccgggagcagctcgtggcgc 338 |||| ||||||||| || | |||||||||||||| || || ||||||||||| ||||||| Sbjct: 42908 acgatgaggaggacatcgcgaagctgctcgagcccctgtcgcgggagcagctggtggcgc 42849 Query: 339 t 339 | Sbjct: 42848 t 42848
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Minus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 32426195 gggaccatctacttccccatcaccgacgaccccccggagccg 32426154 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4732128 gggaccatctacttccccatcaccgacgaccccccggagccg 4732169 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 86 cccatggcgccgaagaagcggaaggcggatccggcgg 122 |||||||| ||||||||||| |||||||||||||||| Sbjct: 32426312 cccatggctccgaagaagcgaaaggcggatccggcgg 32426276 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 279 acgaggaggaggacgtcaccaagctgctcgagccgctctcccgggagcagctcgtggcgc 338 |||| ||||||||| || | |||||||||||||| || || ||||||||||| ||||||| Sbjct: 32426107 acgatgaggaggacatcgcgaagctgctcgagcccctgtcgcgggagcagctggtggcgc 32426048 Query: 339 t 339 | Sbjct: 32426047 t 32426047
>dbj|AK101408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037I12, full insert sequence Length = 2084 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 173 gggaccatctacttccccatcaccgacgaccccccggagccg 214 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 279 acgaggaggaggacgtcaccaagctgctcgagccgctctcccgggagcagctcgtggcgc 338 |||| ||||||||| || | |||||||||||||| || || ||||||||||| ||||||| Sbjct: 261 acgatgaggaggacatcgcgaagctgctcgagcccctgtcgcgggagcagctggtggcgc 320 Query: 339 t 339 | Sbjct: 321 t 321 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 86 cccatggcgccgaagaagcggaaggcggatccggcgg 122 |||||||| ||||||||||| |||||||||||||||| Sbjct: 56 cccatggctccgaagaagcgaaaggcggatccggcgg 92
>dbj|AK065789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042J24, full insert sequence Length = 2064 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 154 gggaccatctacttccccatcaccgacgaccccccggagccg 195 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 279 acgaggaggaggacgtcaccaagctgctcgagccgctctcccgggagcagctcgtggcgc 338 |||| ||||||||| || | |||||||||||||| || || ||||||||||| ||||||| Sbjct: 242 acgatgaggaggacatcgcgaagctgctcgagcccctgtcgcgggagcagctggtggcgc 301 Query: 339 t 339 | Sbjct: 302 t 302 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 86 cccatggcgccgaagaagcggaaggcggatccggcgg 122 |||||||| ||||||||||| |||||||||||||||| Sbjct: 38 cccatggctccgaagaagcgaaaggcggatccggcgg 74
>dbj|AK058405.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-B10, full insert sequence Length = 1819 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 200 gggaccatctacttccccatcaccgacgaccccccggagccg 241 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 279 acgaggaggaggacgtcaccaagctgctcgagccgctctcccgggagcagctcgtggcgc 338 |||| ||||||||| || | |||||||||||||| || || ||||||||||| ||||||| Sbjct: 288 acgatgaggaggacatcgcgaagctgctcgagcccctgtcgcgggagcagctggtggcgc 347 Query: 339 t 339 | Sbjct: 348 t 348 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 86 cccatggcgccgaagaagcggaaggcggatccggcgg 122 |||||||| ||||||||||| |||||||||||||||| Sbjct: 83 cccatggctccgaagaagcgaaaggcggatccggcgg 119
>dbj|AK119286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-C12, full insert sequence Length = 3369 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 179 gggaccatctactaccccatcaccgacgaccccccggagccg 220 ||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 152 gggaccatccacttccccatcaccgacgaccccccggagccg 193 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 279 acgaggaggaggacgtcaccaagctgctcgagccgctctcccgggagcagctcgtggcgc 338 |||| ||||||||| || | |||||||||||||| || || ||||||||||| ||||||| Sbjct: 240 acgatgaggaggacatcgcgaagctgctcgagcccctgtcgcgggagcagctggtggcgc 299 Query: 339 t 339 | Sbjct: 300 t 300 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 86 cccatggcgccgaagaagcggaaggcggatccggcgg 122 |||||||| ||||||||||| |||||||||||||||| Sbjct: 35 cccatggctccgaagaagcgaaaggcggatccggcgg 71
>gb|AY019994.1| Oryza sativa microsatellite MRG2319 containing (CT)X14, genomic sequence Length = 228 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 86 cccatggcgccgaagaagcggaaggcggatccggcgg 122 |||||||| ||||||||||| |||||||||||||||| Sbjct: 186 cccatggctccgaagaagcgaaaggcggatccggcgg 222
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgcc 145 ||||||||||||||||||||||||||||| Sbjct: 20951023 cggcggcggccgtcgccgacgccgccgcc 20951051 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 11110865 gccgtcgccgacgccgccgcc 11110885 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 gcggaaggcggatccggcggcggc 126 ||||| |||||||||||||||||| Sbjct: 10373807 gcggagggcggatccggcggcggc 10373830
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgcc 145 ||||||||||||||||||||||||||||| Sbjct: 43112 cggcggcggccgtcgccgacgccgccgcc 43140
>gb|AY249529.1| Rhodococcus ruber aldh6-adh6 operon, complete sequence Length = 2791 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 124 ggccgtcgccgacgccgccgccca 147 |||||||||||||||||||||||| Sbjct: 1002 ggccgtcgccgacgccgccgccca 1025
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 120 cggcggccgtcgccgacgccgccg 143 |||||||||||||||||||||||| Sbjct: 37755305 cggcggccgtcgccgacgccgccg 37755282 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Minus Query: 306 tcgagccgctctcccgggagcagctcg 332 ||||||||||||||||||| ||||||| Sbjct: 24368085 tcgagccgctctcccgggaccagctcg 24368059 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 23807538 gccgtcgccgacgccgccgcc 23807558 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 20109747 ccgtcgccgacgccgccgcc 20109766 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 cggcggcggccgtcgccgacgccg 140 |||||||||||||||||| ||||| Sbjct: 5543513 cggcggcggccgtcgccgccgccg 5543490
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 120 cggcggccgtcgccgacgccgccg 143 |||||||||||||||||||||||| Sbjct: 83606 cggcggccgtcgccgacgccgccg 83583
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 128 gtcgccgacgccgccgcccaccac 151 |||||||||||||||||||||||| Sbjct: 2937374 gtcgccgacgccgccgcccaccac 2937351
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 120 cggcggccgtcgccgacgccgccg 143 |||||||||||||||||||||||| Sbjct: 14553 cggcggccgtcgccgacgccgccg 14530
>ref|NM_192778.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Plus Query: 306 tcgagccgctctcccgggagcagctcg 332 ||||||||||||||||||| ||||||| Sbjct: 116 tcgagccgctctcccgggaccagctcg 142
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Minus Query: 121 ggcggccgtcgccgacgccgccg 143 ||||||||||||||||||||||| Sbjct: 4486805 ggcggccgtcgccgacgccgccg 4486783 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cggatccggcggcggccgtc 130 |||||||||||||||||||| Sbjct: 5119073 cggatccggcggcggccgtc 5119054 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 cggcggccgtcgccgacgccgccg 143 ||||||||||||||||||| |||| Sbjct: 1910241 cggcggccgtcgccgacgcggccg 1910218
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Minus Query: 306 tcgagccgctctcccgggagcagctcg 332 ||||||||||||||||||| ||||||| Sbjct: 113989 tcgagccgctctcccgggaccagctcg 113963
>dbj|AK120636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K01, full insert sequence Length = 1754 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Plus Query: 306 tcgagccgctctcccgggagcagctcg 332 ||||||||||||||||||| ||||||| Sbjct: 184 tcgagccgctctcccgggaccagctcg 210
>ref|NM_193024.2| Oryza sativa (japonica cultivar-group), mRNA Length = 863 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 120 cggcggccgtcgccgacgccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 94 cggcggccgtcgccgtcgccgccgcc 69
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 118 ggcggcggccgtcgccgacgccgccgccca 147 |||||| |||||||||| |||||||||||| Sbjct: 103221 ggcggccgccgtcgccggcgccgccgccca 103192
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cggcggccgtcgccgacgccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 25877648 cggcggccgtcgccgtcgccgccgcc 25877673 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccacc 149 |||||||||| |||||||||||||| Sbjct: 25256671 gccgtcgccggcgccgccgcccacc 25256695
>dbj|AK062899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F02, full insert sequence Length = 863 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 120 cggcggccgtcgccgacgccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 94 cggcggccgtcgccgtcgccgccgcc 69
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cggcggccgtcgccgacgccgccgcc 145 ||||||||||||||| |||||||||| Sbjct: 48096 cggcggccgtcgccgtcgccgccgcc 48121
>ref|XM_464737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 597 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 146 gccgtcgccgacgccgccgcc 126
>ref|XM_463242.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1698 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ctacgactacgaggaggagga 291 ||||||||||||||||||||| Sbjct: 27 ctacgactacgaggaggagga 47
>ref|NM_192671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 113 gccgtcgccgacgccgccgcc 93
>ref|XM_469556.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1392 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 92 gccgtcgccgacgccgccgcc 72
>ref|XM_479152.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1629 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccacc 149 |||||||||| |||||||||||||| Sbjct: 946 gccgtcgccggcgccgccgcccacc 970
>gb|AY023100.1| Oryza sativa microsatellite MRG5425 containing (GAG)X9, genomic sequence Length = 227 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ctacgactacgaggaggagga 291 ||||||||||||||||||||| Sbjct: 91 ctacgactacgaggaggagga 111
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ctacgactacgaggaggagga 291 ||||||||||||||||||||| Sbjct: 83281 ctacgactacgaggaggagga 83301
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 43689 gccgtcgccgacgccgccgcc 43669
>ref|XM_364983.1| Magnaporthe grisea 70-15 hypothetical protein (MG09828.4) partial mRNA Length = 1959 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 catggcgccgaagaagcggaa 108 ||||||||||||||||||||| Sbjct: 1128 catggcgccgaagaagcggaa 1108
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 gcggcggccgtcgccgacgccgccg 143 ||||||||||||||||||| ||||| Sbjct: 821478 gcggcggccgtcgccgacgacgccg 821454
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 gcggcggccgtcgccgacgccgccg 143 ||||||||||||||||||| ||||| Sbjct: 1421103 gcggcggccgtcgccgacgacgccg 1421079
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 28683119 gccgtcgccgacgccgccgcc 28683099 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 25622423 gccgtcgccgacgccgccgcc 25622443 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ctacgactacgaggaggagga 291 ||||||||||||||||||||| Sbjct: 23635198 ctacgactacgaggaggagga 23635218 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 ccccatcaccgacgaccccccggagccg 220 |||||||||||||| || |||||||||| Sbjct: 10315960 ccccatcaccgacggcctcccggagccg 10315987 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 cggcggcggccgtcgccgacgccgccgc 144 |||||||||||| ||||| ||||||||| Sbjct: 9800293 cggcggcggccgccgccgccgccgccgc 9800266
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 79928 gccgtcgccgacgccgccgcc 79908
>gb|AY390233.1| Phalaenopsis violacea specimen-voucher KDAIS KC-361 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgcc 145 |||||||||||| ||||| |||||||||| Sbjct: 50 cggcggcggccgccgccgccgccgccgcc 78
>gb|AF259451.1| Martensia pavonia clone mpav large subunit ribosomal RNA gene, partial sequence Length = 1148 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 cctaatctccgcctccacccc 38 ||||||||||||||||||||| Sbjct: 1064 cctaatctccgcctccacccc 1044
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ggccgtcgccgacgccgccgcccac 148 |||| |||||||||||||||||||| Sbjct: 1645721 ggccttcgccgacgccgccgcccac 1645697
>ref|NM_000679.3| Homo sapiens adrenergic, alpha-1B-, receptor (ADRA1B), mRNA Length = 2272 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgcc 145 |||| ||||||| |||||||||||||||| Sbjct: 1277 cggccgcggccgccgccgacgccgccgcc 1305
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 gagcagccggagcagaagccc 172 ||||||||||||||||||||| Sbjct: 140718 gagcagccggagcagaagccc 140738
>gb|AF305570.1| Human herpesvirus 2 (strain G) ribonucleotide reductase small subunit gene, complete cds Length = 1398 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 acgaggaggaggacgtcaccaagct 303 ||||||||||||||||| ||||||| Sbjct: 569 acgaggaggaggacgtctccaagct 593
>gb|AE006013.1| Caulobacter crescentus CB15 section 339 of 359 of the complete genome Length = 13369 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 gcggccgtcgccgacgccgcc 142 ||||||||||||||||||||| Sbjct: 12025 gcggccgtcgccgacgccgcc 12045
>gb|AC068657.6| Homo sapiens chromosome 5 clone CTB-67I13, complete sequence Length = 128332 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgcc 145 |||| ||||||| |||||||||||||||| Sbjct: 52757 cggccgcggccgccgccgacgccgccgcc 52785
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 ctactaccccatcaccgacgacccc 211 |||| |||||||||||||||||||| Sbjct: 2005000 ctacaaccccatcaccgacgacccc 2005024
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 2763882 gccgtcgccgacgccgccgcc 2763862
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 28774443 gccgtcgccgacgccgccgcc 28774423 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 25713732 gccgtcgccgacgccgccgcc 25713752 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ctacgactacgaggaggagga 291 ||||||||||||||||||||| Sbjct: 23628226 ctacgactacgaggaggagga 23628246 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 ccccatcaccgacgaccccccggagccg 220 |||||||||||||| || |||||||||| Sbjct: 10314061 ccccatcaccgacggcctcccggagccg 10314088 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 cggcggcggccgtcgccgacgccgccgc 144 |||||||||||| ||||| ||||||||| Sbjct: 9798414 cggcggcggccgccgccgccgccgccgc 9798387
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 9462799 gccgtcgccgacgccgccgcc 9462819 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 7024035 gccgtcgccgacgccgccgcc 7024015 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccaccacg 152 |||||||||| ||||||||||| ||||| Sbjct: 34939109 gccgtcgccgtcgccgccgccctccacg 34939136 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 29905210 ccgtcgccgacgccgccgcc 29905191 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gtcgccgacgccgccgcccaccac 151 ||||||| |||||||||||||||| Sbjct: 4250810 gtcgccgccgccgccgcccaccac 4250833
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 6080 gccgtcgccgacgccgccgcc 6100
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 15777 gccgtcgccgacgccgccgcc 15797
>gb|AY101571.1| Pontoscolex corethrurus 28S ribosomal RNA gene, partial sequence Length = 694 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 gcggccgtcgccgacgccgcc 142 ||||||||||||||||||||| Sbjct: 414 gcggccgtcgccgacgccgcc 394
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 27454 gccgtcgccgacgccgccgcc 27434
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470A03 Length = 133167 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 117657 gccgtcgccgacgccgccgcc 117637
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 76360 gccgtcgccgacgccgccgcc 76380
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 88123 gccgtcgccgacgccgccgcc 88143
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccacc 149 |||||||||| |||||||||||||| Sbjct: 73342 gccgtcgccggcgccgccgcccacc 73366
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0004P20 Length = 160410 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 69672 gccgtcgccgacgccgccgcc 69692
>gb|AE005073.1| Halobacterium sp. NRC-1 section 104 of 170 of the complete genome Length = 12021 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 cgccgacgccgccgcccaccacgag 154 |||||||| |||||||||||||||| Sbjct: 8904 cgccgacgacgccgcccaccacgag 8880
>dbj|AK103733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138F17, full insert sequence Length = 1629 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccacc 149 |||||||||| |||||||||||||| Sbjct: 946 gccgtcgccggcgccgccgcccacc 970
>dbj|AK064844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G08, full insert sequence Length = 1075 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 132 gccgtcgccgacgccgccgcc 112
>dbj|AK060027.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D07, full insert sequence Length = 1047 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 62 gccgtcgccgacgccgccgcc 42
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcc 145 ||||||||||||||||||||| Sbjct: 2772913 gccgtcgccgacgccgccgcc 2772893
>gb|U03865.1|HSU03865 Human adrenergic alpha-1b receptor protein mRNA, complete cds Length = 1738 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgcc 145 |||| ||||||| |||||||||||||||| Sbjct: 1227 cggccgcggccgccgccgacgccgccgcc 1255
>ref|NM_188297.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 765 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccg 140 |||||||||||||||||| ||||| Sbjct: 32 cggcggcggccgtcgccgccgccg 55
>ref|XM_470656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 180 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 cggcggcggccgtcgccgacgccgccgc 144 |||||||||||| ||||| ||||||||| Sbjct: 161 cggcggcggccgccgccgccgccgccgc 134
>ref|XM_468381.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1195 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccaccacg 152 |||||||||| ||||||||||| ||||| Sbjct: 75 gccgtcgccgtcgccgccgccctccacg 102
>ref|XM_467511.1| Oryza sativa (japonica cultivar-group), mRNA Length = 864 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 478 ccgtcgccgacgccgccgcc 459
>ref|NM_193321.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 372 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 258 ccgtcgccgacgccgccgcc 239
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ggcggcggccgtcgccgacg 137 |||||||||||||||||||| Sbjct: 2555789 ggcggcggccgtcgccgacg 2555770
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgc 144 |||||||||||| ||||| ||||||||| Sbjct: 37253 cggcggcggccgccgccgccgccgccgc 37280
>ref|XM_612949.2| PREDICTED: Bos taurus similar to bromodomain containing protein 1, transcript variant 1 (LOC533517), mRNA Length = 3549 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 cgccccgcccagcccccatggcgc 95 ||||||||||||| |||||||||| Sbjct: 303 cgccccgcccagcgcccatggcgc 326
>ref|XM_882769.1| PREDICTED: Bos taurus similar to bromodomain containing protein 1, transcript variant 2 (LOC533517), mRNA Length = 3174 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 cgccccgcccagcccccatggcgc 95 ||||||||||||| |||||||||| Sbjct: 303 cgccccgcccagcgcccatggcgc 326
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gcggccgtcgccgacgccgc 141 |||||||||||||||||||| Sbjct: 1020255 gcggccgtcgccgacgccgc 1020274
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ggcggcggccgtcgccgacg 137 |||||||||||||||||||| Sbjct: 3768061 ggcggcggccgtcgccgacg 3768042
>ref|XM_655667.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3155.2), mRNA Length = 1926 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 catggcgccgaagaagcgga 107 |||||||||||||||||||| Sbjct: 1086 catggcgccgaagaagcgga 1067
>gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete sequence Length = 366816 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgc 144 |||| ||||||| ||||||||||||||| Sbjct: 139275 cggccgcggccgccgccgacgccgccgc 139302
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 gcggcggccgtcgccgacgccgcc 142 ||||||||||||||||||| |||| Sbjct: 1546620 gcggcggccgtcgccgacgacgcc 1546597
>ref|XM_847707.1| PREDICTED: Canis familiaris similar to forkhead box D2 (LOC610256), mRNA Length = 921 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 gccgtcgccgacgccgccgcccaccacg 152 |||| ||||| ||||||||||||||||| Sbjct: 111 gccgccgccgccgccgccgcccaccacg 84
>ref|XM_854750.1| PREDICTED: Canis familiaris similar to FAS-associated factor 1 (FAF1 protein) (hFAF1), transcript variant 4 (LOC608231), mRNA Length = 2418 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||||||||| |||||||||| Sbjct: 321 gcggccgtcgccgccgccgccgcc 298
>ref|XM_844729.1| PREDICTED: Canis familiaris similar to FAS-associated factor 1 (FAF1 protein) (hFAF1), transcript variant 2 (LOC608231), mRNA Length = 2868 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||||||||| |||||||||| Sbjct: 321 gcggccgtcgccgccgccgccgcc 298
>ref|XM_854686.1| PREDICTED: Canis familiaris similar to FAS-associated factor 1 (FAF1 protein) (hFAF1), transcript variant 3 (LOC608231), mRNA Length = 3031 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||||||||| |||||||||| Sbjct: 321 gcggccgtcgccgccgccgccgcc 298
>gb|AY390236.1| Phalaenopsis violacea specimen-voucher KDAIS KC-439 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 ggcggcggccgtcgccgacgccgccgcc 145 ||||||||||| ||||| |||||||||| Sbjct: 48 ggcggcggccgccgccgccgccgccgcc 75
>gb|AY390235.1| Phalaenopsis violacea specimen-voucher KDAIS KC-422 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 ggcggcggccgtcgccgacgccgccgcc 145 ||||||||||| ||||| |||||||||| Sbjct: 48 ggcggcggccgccgccgccgccgccgcc 75
>gb|AY390234.1| Phalaenopsis violacea specimen-voucher KDAIS KC-367 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 ggcggcggccgtcgccgacgccgccgcc 145 ||||||||||| ||||| |||||||||| Sbjct: 48 ggcggcggccgccgccgccgccgccgcc 75
>gb|AF271357.1| Oryza sativa (indica cultivar-group) phospholipase D (RPLD4) gene, complete cds Length = 4740 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgtcgccgacgccgccgccc 146 |||||||||||||||||||| Sbjct: 2196 cgtcgccgacgccgccgccc 2177
>gb|BC114108.1| Bos taurus similar to FAS-associated factor 1 (FAF1 protein) (hFAF1), mRNA (cDNA clone MGC:137718 IMAGE:8175595), complete cds Length = 2643 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||||||||| |||||||||| Sbjct: 349 gcggccgtcgccgccgccgccgcc 326
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 acgccgccgcccaccacgag 154 |||||||||||||||||||| Sbjct: 4669757 acgccgccgcccaccacgag 4669738
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggccgtcgccgacgccgccg 143 |||||||||||||||||||| Sbjct: 3687718 ggccgtcgccgacgccgccg 3687737
>emb|AL353597.20| Human DNA sequence from clone RP1-153P14 on chromosome 6 Contains the gene for a novel protein (containing KIAA0082, FLJ22156 and FLJ20341), three novel genes, the gene for a novel protein and three CpG islands, complete sequence Length = 162451 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 ccgccgccccgcccagcccccatg 91 ||||| |||||||||||||||||| Sbjct: 152318 ccgccaccccgcccagcccccatg 152341
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gcggccgtcgccgacgccgc 141 |||||||||||||||||||| Sbjct: 2337745 gcggccgtcgccgacgccgc 2337764 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 cggcggcggccgtcgccgacgccgccgc 144 |||||||||||| ||||| ||||||||| Sbjct: 840155 cggcggcggccggcgccgccgccgccgc 840128
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ggcggcggccgtcgccgacg 137 |||||||||||||||||||| Sbjct: 3508399 ggcggcggccgtcgccgacg 3508380
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 119 gcggcggccgtcgccgacgccgccgccc 146 ||||||||||||| || ||||||||||| Sbjct: 80637 gcggcggccgtcgtcgccgccgccgccc 80664
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 4.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 120 cggcggccgtcgccgacgccgccgcccaccacgagc 155 ||||||||||| || || ||||||||||||||||| Sbjct: 86707 cggcggccgtcctcggcggcgccgcccaccacgagc 86742
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cgccgacgccgccgcccaccacga 153 |||||||||||||||||| ||||| Sbjct: 1541989 cgccgacgccgccgcccatcacga 1542012
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 ccccatcaccgacgaccccccggagccg 220 |||||||||||||| || |||||||||| Sbjct: 29426 ccccatcaccgacggcctcccggagccg 29453
>gb|AC069458.2| Drosophila melanogaster 3L BAC RP98-23N10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169863 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ggatccggcggcggccgtcg 131 |||||||||||||||||||| Sbjct: 59333 ggatccggcggcggccgtcg 59352
>tpg|BK000926.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M325, complete sequence Length = 11949 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 5095 ccgtcgccgacgccgccgcc 5114
>ref|NM_170493.1| Drosophila melanogaster CG31020-PA (spdo) mRNA, complete cds Length = 1822 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgccgcccaccacgagcagc 158 |||||||||||||||||||| Sbjct: 1084 cgccgcccaccacgagcagc 1103
>dbj|AB217559.1| Lesliea mirabilis genes for ITS1, 5.8S rRNA, ITS2, specimen_voucher:TBG145844 Length = 657 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccg 140 |||||||||||||||||| ||||| Sbjct: 48 cggcggcggccgtcgccgccgccg 71
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cggccgtcgccgacgccgccgccc 146 ||||||||||||| |||||||||| Sbjct: 226138 cggccgtcgccgatgccgccgccc 226161
>ref|NM_140882.2| Drosophila melanogaster Ornithine aminotransferase precursor CG8782-RA (Oat), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ggatccggcggcggccgtcg 131 |||||||||||||||||||| Sbjct: 185 ggatccggcggcggccgtcg 166
>dbj|AK148085.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370013B05 product:SH2-B PH domain containing signaling mediator 1, full insert sequence Length = 3096 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||||||||| |||||||||| Sbjct: 36 gcggccgtcgccgccgccgccgcc 59
>gb|AY047517.1| Drosophila melanogaster GH01984 full length cDNA Length = 1498 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ggatccggcggcggccgtcg 131 |||||||||||||||||||| Sbjct: 166 ggatccggcggcggccgtcg 147
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gcggccgtcgccgacgccgc 141 |||||||||||||||||||| Sbjct: 1885056 gcggccgtcgccgacgccgc 1885075
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||| |||||||||||||||| Sbjct: 23074611 gcggccgacgccgacgccgccgcc 23074588
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgtcgccgacgccgccgccc 146 |||||||||||||||||||| Sbjct: 23538997 cgtcgccgacgccgccgccc 23538978 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccaccacg 152 |||| ||||| ||||||||||||||||| Sbjct: 9216219 gccgccgccgccgccgccgcccaccacg 9216246
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgc 144 |||||||||||| ||||| ||||||||| Sbjct: 19233178 cggcggcggccgccgccgccgccgccgc 19233205
>gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, region 99F4-99F11, BAC clone BACR48G16, complete sequence Length = 173844 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgccgcccaccacgagcagc 158 |||||||||||||||||||| Sbjct: 48541 cgccgcccaccacgagcagc 48560
>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0051H17 Length = 187471 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 16125 ccgtcgccgacgccgccgcc 16144
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 107709 ccgtcgccgacgccgccgcc 107728
>gb|AE004858.1| Pseudomonas aeruginosa PAO1, section 419 of 529 of the complete genome Length = 10487 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cggccgtcgccgacgccgccgccc 146 ||||| |||||||||||||||||| Sbjct: 4820 cggccttcgccgacgccgccgccc 4797
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccgccgc 144 |||||||||||| ||||| ||||||||| Sbjct: 74204 cggcggcggccgccgccgccgccgccgc 74231
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 cggcggcggccgtcgccgacgccg 140 |||||||||||||||||| ||||| Sbjct: 140353 cggcggcggccgtcgccgccgccg 140330
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 cggcggcggccgtcgccgacgccg 140 |||||||||||||||||| ||||| Sbjct: 8986 cggcggcggccgtcgccgccgccg 8963
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 caccgacgaccccccggagc 218 |||||||||||||||||||| Sbjct: 846958 caccgacgaccccccggagc 846977
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 gcggaaggcggatccggcggcggc 126 ||||| |||||||||||||||||| Sbjct: 81512 gcggagggcggatccggcggcggc 81535
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 133 cgacgccgccgcccaccacgagcagccg 160 |||||||||||||| |||| |||||||| Sbjct: 1394904 cgacgccgccgccctccaccagcagccg 1394877
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccaccacg 152 |||| ||||| ||||||||||||||||| Sbjct: 110241 gccgccgccgccgccgccgcccaccacg 110268
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gtcgccgacgccgccgcccaccac 151 ||||||| |||||||||||||||| Sbjct: 67624 gtcgccgccgccgccgcccaccac 67647
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 gcggccgtcgccgacgccgccgcc 145 |||||| ||||||||||||||||| Sbjct: 5631783 gcggccctcgccgacgccgccgcc 5631760
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgtcgccgacgccgccgccc 146 |||||||||||||||||||| Sbjct: 19961 cgtcgccgacgccgccgccc 19942
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 5486 ccgtcgccgacgccgccgcc 5467
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ccgtcgccgacgccgccgcc 145 |||||||||||||||||||| Sbjct: 62175 ccgtcgccgacgccgccgcc 62156
>gb|AE005096.1| Halobacterium sp. NRC-1 section 127 of 170 of the complete genome Length = 13184 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 gccgacgccgccgcccaccacgag 154 ||||||||||||||||| |||||| Sbjct: 12463 gccgacgccgccgcccaacacgag 12486
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccaccacg 152 |||||||||| ||||||||||| ||||| Sbjct: 98606 gccgtcgccgtcgccgccgccctccacg 98633
>dbj|AK119861.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-H08, full insert sequence Length = 2783 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgtcgccgacgccgccgccc 146 |||||||||||||||||||| Sbjct: 602 cgtcgccgacgccgccgccc 583
>dbj|AK108780.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-A04, full insert sequence Length = 1195 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gccgtcgccgacgccgccgcccaccacg 152 |||||||||| ||||||||||| ||||| Sbjct: 75 gccgtcgccgtcgccgccgccctccacg 102
>gb|AF142394.1|AF142394 Hepatitis C virus type 2c isolate BsHCC238 polyprotein E1/E2 region mRNA, partial cds Length = 258 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ctaatctccgcctccacccc 38 |||||||||||||||||||| Sbjct: 170 ctaatctccgcctccacccc 151
>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete sequence Length = 239051 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgccgcccaccacgagcagc 158 |||||||||||||||||||| Sbjct: 46124 cgccgcccaccacgagcagc 46143
>gb|AE003516.4| Drosophila melanogaster chromosome 3L, section 69 of 83 of the complete sequence Length = 305312 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ggatccggcggcggccgtcg 131 |||||||||||||||||||| Sbjct: 192663 ggatccggcggcggccgtcg 192682
>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds; and unknown gene Length = 18555 Score = 40.1 bits (20), Expect = 4.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 117 cggcggcggccgtcgccgacgccgccgcccaccacg 152 ||||||| | || ||||||||| ||||||||||||| Sbjct: 13107 cggcggctggcgccgccgacgctgccgcccaccacg 13072
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ggcggcggccgtcgccgacg 137 |||||||||||||||||||| Sbjct: 1358231 ggcggcggccgtcgccgacg 1358250
>gb|BT001576.1| Drosophila melanogaster RE23355 full insert cDNA Length = 2099 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgccgcccaccacgagcagc 158 |||||||||||||||||||| Sbjct: 1084 cgccgcccaccacgagcagc 1103
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cgccgacgccgccgcccaccacga 153 |||||||||||||||||| ||||| Sbjct: 1064271 cgccgacgccgccgcccatcacga 1064294
>gb|AY609627.1| Sus scrofa clone Clu_21888.scr.msk.p1.Contig1, mRNA sequence Length = 2619 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cggccgtcgccgacgccgccgccc 146 |||||||||||| ||||||||||| Sbjct: 213 cggccgtcgccgtcgccgccgccc 190
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ggcggccgtcgccgacgccg 140 |||||||||||||||||||| Sbjct: 2893275 ggcggccgtcgccgacgccg 2893256
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||| |||||||||||||||| Sbjct: 23002802 gcggccgacgccgacgccgccgcc 23002779
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||| |||||||||||||||| Sbjct: 103786 gcggccgacgccgacgccgccgcc 103809
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 caccgacgaccccccggagc 218 |||||||||||||||||||| Sbjct: 516006 caccgacgaccccccggagc 516025
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 cggcggcggccgtcgccgacgccg 140 ||||||||||| |||||||||||| Sbjct: 46410 cggcggcggccctcgccgacgccg 46433
>gb|M99590.1|HUMADRENB Homo sapiens (clone pmt2-huma1b) alpha-1B adrenergic receptor gene sequence Length = 2646 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gcggccgtcgccgacgccgccgcc 145 ||||||| |||||||||||||||| Sbjct: 1122 gcggccgccgccgacgccgccgcc 1145
>dbj|AB070942.1| Streptomyces avermitilis polyketide-2 biosynthetic gene cluster Length = 27522 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 cggcggccgtcgccgacgccgccg 143 ||||||||||||||||||| |||| Sbjct: 20041 cggcggccgtcgccgacgcggccg 20018 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,737,623 Number of Sequences: 3902068 Number of extensions: 2737623 Number of successful extensions: 74038 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 159 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68092 Number of HSP's gapped (non-prelim): 5946 length of query: 341 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 319 effective length of database: 17,147,199,772 effective search space: 5469956727268 effective search space used: 5469956727268 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
