ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50g09 |
|---|---|
| Clone Library Name | barley_pub |
>TGA7_ARATH (Q93ZE2) Transcription factor TGA7 (AtbZIP50)| Length = 368 Score = 60.5 bits (145), Expect = 2e-09 Identities = 31/107 (28%), Positives = 49/107 (45%) Frame = +3 Query: 45 RPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGH 224 + Q H G + G SF + W+ EQS + LV+ L H Sbjct: 137 KQQGHLGPSGSINTGIASFEMEYSHWLQEQSRRVSELRTALQSHISDIELKMLVESCLNH 196 Query: 225 YENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQLL 365 Y N ++ KS AA ADV + + W ++TE + W GG+RP+ + ++ Sbjct: 197 YANLFQMKSDAAKADVFYLISGMWRTSTERFFQWIGGFRPSELLNVV 243
>TGA1A_TOBAC (P14232) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a)| (ASF-1 protein) Length = 359 Score = 57.0 bits (136), Expect = 2e-08 Identities = 29/96 (30%), Positives = 47/96 (48%) Frame = +3 Query: 78 ASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRAKSAA 257 AS G F + W+ EQ+ R +VD L HY + +R K+ A Sbjct: 139 ASSGTAVFDMEYGHWVEEQTRQTNDLRIALHSQIGEAELRIIVDGYLNHYFDLFRMKATA 198 Query: 258 ASADVLPMFAPSWISATESLYLWCGGWRPTAAVQLL 365 A ADVL + + W ++ E ++W GG+RP+ +++L Sbjct: 199 AKADVLYIMSGMWKTSAERFFMWIGGFRPSELLKVL 234
>TGA5_ARATH (Q39163) Transcription factor TGA5 (Ocs element-binding factor 5)| (OBF5) (AtbZIP26) Length = 330 Score = 56.6 bits (135), Expect = 3e-08 Identities = 32/124 (25%), Positives = 56/124 (45%) Frame = +3 Query: 3 QGARATWITMTATSRPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXX 182 Q AR + ++++ H + A DG +F + W +++ Sbjct: 87 QRARQQGVFISSSGDQAH-----STAGDGAMAFDVEYRRWQEDKNRQMKELSSAIDSHAT 141 Query: 183 XXXXRRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQL 362 R +VD V+ HYE YR K AA +DV + + W + E +LW GG+R + ++L Sbjct: 142 DSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLSGMWKTPAERCFLWLGGFRSSELLKL 201 Query: 363 LYSK 374 + S+ Sbjct: 202 IASQ 205
>TGA3_ARATH (Q39234) Transcription factor TGA3 (AtbZIP22)| Length = 384 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/101 (27%), Positives = 46/101 (45%) Frame = +3 Query: 63 GSLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYR 242 G + G +F + W+ EQ+ + LVD L HY N +R Sbjct: 158 GPAGNMNSGIAAFEMEYTHWLEEQNRRVSEIRTALQAHIGDIELKMLVDSCLNHYANLFR 217 Query: 243 AKSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQLL 365 K+ AA ADV + + W ++TE + W GG+RP+ + ++ Sbjct: 218 MKADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVV 258
>TGA2_ARATH (P43273) Transcription factor TGA2 (HBP-1b homolog) (AHBP-1b)| (AtbZIP20) Length = 330 Score = 56.2 bits (134), Expect = 3e-08 Identities = 35/132 (26%), Positives = 56/132 (42%) Frame = +3 Query: 3 QGARATWITMTATSRPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXX 182 Q AR + ++ T H G +G +F W+ E++ Sbjct: 87 QRARQQGVFISGTGDQAHSTGG-----NGALAFDAEHSRWLEEKNKQMNELRSALNAHAG 141 Query: 183 XXXXRRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQL 362 R +VD V+ HYE +R KS AA DV + + W + E +LW GG+R + ++L Sbjct: 142 DSELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKL 201 Query: 363 LYSKSGVQLEAQ 398 L ++ E Q Sbjct: 202 LANQLEPMTERQ 213
>HBP1B_WHEAT (P23923) Transcription factor HBP-1b(c38)| Length = 332 Score = 55.8 bits (133), Expect = 4e-08 Identities = 29/121 (23%), Positives = 57/121 (47%) Frame = +3 Query: 3 QGARATWITMTATSRPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXX 182 Q AR I +++++ H + + +G +F + W+ E + Sbjct: 87 QRARQQGIFISSSADQSH-----SMSGNGALAFDTEYARWLEEHNRQVNELRAAVNAHAG 141 Query: 183 XXXXRRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQL 362 R +V++++ HY+ ++ K AA ADV + + W + E +LW GG+RP+ ++L Sbjct: 142 DTELRSVVEKIMSHYDEIFKQKGNAAKADVFHVLSGMWKTPAERCFLWLGGFRPSELLKL 201 Query: 363 L 365 L Sbjct: 202 L 202
>TGA6_ARATH (Q39140) Transcription factor TGA6 (AtbZIP45)| Length = 330 Score = 55.1 bits (131), Expect = 7e-08 Identities = 34/132 (25%), Positives = 57/132 (43%) Frame = +3 Query: 3 QGARATWITMTATSRPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXX 182 Q AR + ++++ H G +G +F W+ E++ Sbjct: 87 QRARQQGVFISSSGDQAHSTGG-----NGALAFDAEHSRWLEEKNRQMNELRSALNAHAG 141 Query: 183 XXXXRRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQL 362 R +VD V+ HYE +R KS AA DV + + W + E +LW GG+R + ++L Sbjct: 142 DTELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKL 201 Query: 363 LYSKSGVQLEAQ 398 L ++ E Q Sbjct: 202 LANQLEPMTERQ 213
>HBP1C_WHEAT (Q41558) Transcription factor HBP-1b(c1) (Fragment)| Length = 476 Score = 53.9 bits (128), Expect = 2e-07 Identities = 24/100 (24%), Positives = 47/100 (47%) Frame = +3 Query: 66 SLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRA 245 S + + +G +F + W+ E + R++VD ++ Y+ ++R Sbjct: 248 SQSASGNGAVAFDMEYARWLEEHNKHINELRAAANAHAGDDDLRKIVDSIMSQYDEFFRL 307 Query: 246 KSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQLL 365 K AA ADV + + W + E ++W GG+R + ++LL Sbjct: 308 KGVAAKADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLL 347
>TGA4_ARATH (Q39162) Transcription factor TGA4 (Ocs element-binding factor 4)| (OBF4) (AtbZIP57) Length = 364 Score = 53.9 bits (128), Expect = 2e-07 Identities = 28/95 (29%), Positives = 45/95 (47%) Frame = +3 Query: 81 SDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAA 260 S G +F + W+ EQ+ R LV+ + HY +R KSAAA Sbjct: 146 SSGIVAFEMEYGHWVEEQNRQICELRTVLHGQVSDIELRSLVENAMKHYFQLFRMKSAAA 205 Query: 261 SADVLPMFAPSWISATESLYLWCGGWRPTAAVQLL 365 DV + + W ++ E +LW GG+RP+ +++L Sbjct: 206 KIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVL 240
>TGA1_ARATH (Q39237) Transcription factor TGA1 (DNA-binding protein TGA1a-like| protein) (AtbZIP47) Length = 368 Score = 52.8 bits (125), Expect = 4e-07 Identities = 29/104 (27%), Positives = 48/104 (46%) Frame = +3 Query: 87 GGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAASA 266 G +F + W+ EQ+ R LV+ + HY +R KS+AA A Sbjct: 152 GIAAFEMEYGHWVEEQNRQICELRTVLHGHINDIELRSLVENAMKHYFELFRMKSSAAKA 211 Query: 267 DVLPMFAPSWISATESLYLWCGGWRPTAAVQLLYSKSGVQLEAQ 398 DV + + W ++ E +LW GG+RP+ +++L V + Q Sbjct: 212 DVFFVMSGMWRTSAERFFLWIGGFRPSDLLKVLLPHFDVLTDQQ 255
>TGA21_TOBAC (O24160) TGACG-sequence-specific DNA-binding protein TGA-2.1| (TGA2.1) Length = 456 Score = 51.6 bits (122), Expect = 8e-07 Identities = 24/98 (24%), Positives = 46/98 (46%) Frame = +3 Query: 81 SDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAA 260 ++G +F + W+ E + R +V+ V H++ +R K AA Sbjct: 230 ANGPLAFDAEYSRWLEEHNKHINELRTAVNAHASDPELRSIVNNVTAHFDEVFRVKGNAA 289 Query: 261 SADVLPMFAPSWISATESLYLWCGGWRPTAAVQLLYSK 374 ADV + + W + E ++W GG+RP+ ++LL ++ Sbjct: 290 KADVFHVLSGMWKTPAERCFMWIGGFRPSELLKLLVNQ 327
>ASNH_MYCTU (P64247) Putative asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) Length = 652 Score = 32.3 bits (72), Expect = 0.51 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = +3 Query: 228 ENYY---RAKSAAASADVLPMFAPSW--ISATESLYLWCGGWRPTAAVQ 359 E YY R+ S A +VLP F P W T +Y GW P A +Q Sbjct: 442 ERYYGNARSFSGAQLREVLPGFRPDWTHTDVTAPVYAESAGWDPVARMQ 490
>ASNH_MYCBO (P64248) Putative asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) Length = 652 Score = 32.3 bits (72), Expect = 0.51 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = +3 Query: 228 ENYY---RAKSAAASADVLPMFAPSW--ISATESLYLWCGGWRPTAAVQ 359 E YY R+ S A +VLP F P W T +Y GW P A +Q Sbjct: 442 ERYYGNARSFSGAQLREVLPGFRPDWTHTDVTAPVYAESAGWDPVARMQ 490
>RPOL_BPT3 (P07659) DNA-directed RNA polymerase (EC 2.7.7.6)| Length = 884 Score = 31.6 bits (70), Expect = 0.87 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Frame = +3 Query: 243 AKSAAASADVLPMFAP------SWISATESLYLWCGGWRPTAAVQLLYSKSGV 383 AK A A A + PMF P W++ T Y W G RP A V+ +SK G+ Sbjct: 256 AKRAGALAGISPMFQPCVVPPKPWVAITGGGY-WANGRRPLALVR-THSKKGL 306
>MIAA_SYMTH (Q67NL1) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 319 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 245 QVRGRLRRCAPHVRALVDLRHREPLPLVRRLAPYRRGPAAL 367 +VRG L R PHVRA+ L +RE + +R L + A + Sbjct: 222 EVRGLLVRYPPHVRAMQALGYRELVLYLRGLLTWEEAVALI 262
>OXYR_SHEEP (Q28756) Oxytocin receptor (OT-R)| Length = 391 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 15 ATWITMTATSRPQHHNGSLARASDGGESFAKFFECW 122 ATW+ S PQ H SL +DG F+CW Sbjct: 159 ATWLGCLVASAPQVHIFSLREVADG------VFDCW 188
>OXYR_PIG (P32306) Oxytocin receptor (OT-R)| Length = 386 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 15 ATWITMTATSRPQHHNGSLARASDGGESFAKFFECW 122 ATW+ S PQ H SL +DG F+CW Sbjct: 159 ATWLGCLVASAPQVHIFSLREVADG------VFDCW 188
>ONCM_BOVIN (P53346) Oncostatin M precursor (OSM)| Length = 245 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +2 Query: 251 RGRLRRCAPHVRALVDLRHREPLPLVRRLAPYRRGPAAL 367 +GR RR +P R +P P +RRLAP + P +L Sbjct: 201 QGRSRRHSPCRALKRGARRTQPFPEIRRLAPRGQPPGSL 239
>OXYR_MACMU (P56494) Oxytocin receptor (OT-R)| Length = 389 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 15 ATWITMTATSRPQHHNGSLARASDGGESFAKFFECW 122 ATW+ S PQ H SL +DG F+CW Sbjct: 159 ATWLGCLVASAPQVHIFSLREVADG------VFDCW 188
>OXYR_HUMAN (P30559) Oxytocin receptor (OT-R)| Length = 389 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 15 ATWITMTATSRPQHHNGSLARASDGGESFAKFFECW 122 ATW+ S PQ H SL +DG F+CW Sbjct: 159 ATWLGCLVASAPQVHIFSLREVADG------VFDCW 188
>DNAK_BURPS (O68191) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 650 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 422 AAVEKARELGLELHAGLGVEQLDRGGRAPAAAPEVEALGGGDP 294 A +++LG +++A + +Q G A AAA A GG P Sbjct: 593 AVATASQKLGEKMYADMQAQQAGAAGAAGAAAEGASAQGGAQP 635
>DNAK_BURP1 (Q3JP10) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 650 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 422 AAVEKARELGLELHAGLGVEQLDRGGRAPAAAPEVEALGGGDP 294 A +++LG +++A + +Q G A AAA A GG P Sbjct: 593 AVATASQKLGEKMYADMQAQQAGAAGAAGAAAEGASAQGGAQP 635
>DNAK_BURMA (Q62HD5) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 650 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 422 AAVEKARELGLELHAGLGVEQLDRGGRAPAAAPEVEALGGGDP 294 A +++LG +++A + +Q G A AAA A GG P Sbjct: 593 AVATASQKLGEKMYADMQAQQAGAAGAAGAAAEGASAQGGAQP 635
>G6PD_SYNP7 (P29686) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)| Length = 511 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Frame = +3 Query: 195 RRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESL---YLWCGGWRPTAAVQLL 365 R LVD +LG + RA AS V+ SW ++ + G W P A QL+ Sbjct: 442 RLLVDCMLGDQTLFTRADEVEASWRVVTPLLESWDDPRQAAGISFYEAGTWEPAEAEQLI 501 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,820,648 Number of Sequences: 219361 Number of extensions: 617583 Number of successful extensions: 2066 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2009 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2066 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
