ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50b08 |
|---|---|
| Clone Library Name | barley_pub |
>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 172 bits (436), Expect = 4e-43 Identities = 84/87 (96%), Positives = 85/87 (97%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK Sbjct: 142 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 201 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPSRRMVIVGSITG +TLAGNVPP Sbjct: 202 SDYPSRRMVIVGSITGNSNTLAGNVPP 228 Score = 52.4 bits (124), Expect = 5e-07 Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 2/54 (3%) Frame = +2 Query: 104 LQLLPSTLSVPKKGSSMGAVAVKDTAA--SGSSLTRSAAPRCRWMCWCATPPST 259 LQLLPSTLSVPKKGSSMGA AVKDTAA SS + A+ R AT PS+ Sbjct: 3 LQLLPSTLSVPKKGSSMGAAAVKDTAAFLGVSSKAKKASLAVRTQ--VATAPSS 54
>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 172 bits (436), Expect = 4e-43 Identities = 84/87 (96%), Positives = 85/87 (97%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK Sbjct: 142 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 201 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPSRRMVIVGSITG +TLAGNVPP Sbjct: 202 SDYPSRRMVIVGSITGNSNTLAGNVPP 228 Score = 55.1 bits (131), Expect = 8e-08 Identities = 36/64 (56%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +2 Query: 104 LQLLPSTLSVPKKGSSMGAVAVKDTAA--SGSSLTRSAAPRCRWMCWCATPPSTGPRRAR 277 LQLLPSTLSVPKKGSSMGAVAVKDTAA SS + A+ R A P T + Sbjct: 3 LQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQVATAPSPVTTSPGST 62 Query: 278 RPSP 289 SP Sbjct: 63 ASSP 66
>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)| (NADPH-protochlorophyllide oxidoreductase) (POR) (Fragment) Length = 313 Score = 162 bits (409), Expect = 5e-40 Identities = 79/87 (90%), Positives = 83/87 (95%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FVDAFRRAEMPLDVLVCNAAIYRPTAR PTFTA+G EMSVGVNHLGHFLLARLL+EDLQK Sbjct: 67 FVDAFRRAEMPLDVLVCNAAIYRPTARKPTFTAEGVEMSVGVNHLGHFLLARLLLEDLQK 126 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPSRR+VIVGSITG +TLAGNVPP Sbjct: 127 SDYPSRRLVIVGSITGNDNTLAGNVPP 153
>PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 405 Score = 147 bits (370), Expect = 2e-35 Identities = 67/87 (77%), Positives = 80/87 (91%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FVD FRRAEMPLDVLVCNAA+Y+PTA PTFTA+G E+SVG+NHLGHFLL+RLL++DL+ Sbjct: 160 FVDNFRRAEMPLDVLVCNAAVYQPTANQPTFTAEGFELSVGINHLGHFLLSRLLIDDLKN 219 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPS+R++IVGSITG +TLAGNVPP Sbjct: 220 SDYPSKRLIIVGSITGNTNTLAGNVPP 246
>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 143 bits (360), Expect = 2e-34 Identities = 65/87 (74%), Positives = 78/87 (89%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FV+ FRR+E PLDVLVCNAA+Y PTA+ PT+TADG E+SVG NHLGHFLL+RLL++DL K Sbjct: 153 FVETFRRSERPLDVLVCNAAVYFPTAKEPTYTADGFELSVGTNHLGHFLLSRLLLDDLNK 212 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPS+R++IVGSITG +TLAGNVPP Sbjct: 213 SDYPSKRLIIVGSITGNTNTLAGNVPP 239
>PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast precursor (EC| 1.3.1.33) (PCR C) (NADPH-protochlorophyllide oxidoreductase C) (POR C) Length = 401 Score = 143 bits (360), Expect = 2e-34 Identities = 65/87 (74%), Positives = 79/87 (90%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FV+ FRR E PLDVLVCNAA+Y+PTA+ P+FTA+G E+SVG NHLGHFLL+RLL++DL+K Sbjct: 157 FVENFRRTEQPLDVLVCNAAVYQPTAKEPSFTAEGFEISVGTNHLGHFLLSRLLLDDLKK 216 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPS+RM+IVGSITG +TLAGNVPP Sbjct: 217 SDYPSKRMIIVGSITGNTNTLAGNVPP 243
>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 399 Score = 142 bits (357), Expect = 5e-34 Identities = 66/87 (75%), Positives = 79/87 (90%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FVD FRR+EMPLDVL+ NAA+Y PTA+ P+FTADG E+SVG NHLGHFLL+RLL+EDL+K Sbjct: 154 FVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHFLLSRLLLEDLKK 213 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPS+R++IVGSITG +TLAGNVPP Sbjct: 214 SDYPSKRLIIVGSITGNTNTLAGNVPP 240
>PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 401 Score = 139 bits (351), Expect = 3e-33 Identities = 64/87 (73%), Positives = 77/87 (88%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FVD FRR E PLDVLVCNAA+Y PTA+ PT++A+G E+SV NHLGHFLLARLL++DL+K Sbjct: 156 FVDNFRRTETPLDVLVCNAAVYFPTAKEPTYSAEGFELSVATNHLGHFLLARLLLDDLKK 215 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPS+R++IVGSITG +TLAGNVPP Sbjct: 216 SDYPSKRLIIVGSITGNTNTLAGNVPP 242
>PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 138 bits (348), Expect = 6e-33 Identities = 64/87 (73%), Positives = 76/87 (87%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FVD FR++ PLDVLVCNAA+Y PTA+ PTFTA+G E+SVG NHLGHFLL+RLL+EDL K Sbjct: 154 FVDNFRQSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNK 213 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 S YPS+R++IVGSITG +TLAGNVPP Sbjct: 214 SSYPSKRLIIVGSITGNTNTLAGNVPP 240
>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 Score = 137 bits (344), Expect = 2e-32 Identities = 63/87 (72%), Positives = 77/87 (88%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FV R+ +MP+DV+VCNAA+Y+PTA+ P+FTADG EMSVGVNHLGHFLLAR L+EDL+ Sbjct: 150 FVKNVRQLDMPIDVVVCNAAVYQPTAKEPSFTADGFEMSVGVNHLGHFLLARELLEDLKA 209 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 SDYPS+R++IVGSITG +TLAGNVPP Sbjct: 210 SDYPSKRLIIVGSITGNTNTLAGNVPP 236
>POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 458 Score = 125 bits (315), Expect = 4e-29 Identities = 60/87 (68%), Positives = 71/87 (81%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FVD FRR E LDVLVCNAA+Y PT + P F+A+G E+SVG NH+GHFLLARLLMEDLQK Sbjct: 213 FVDNFRRTERQLDVLVCNAAVYFPTDKEPKFSAEGFELSVGTNHMGHFLLARLLMEDLQK 272 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 + +RM+IVGSITG +T+AGNVPP Sbjct: 273 AKDSLKRMIIVGSITGNSNTVAGNVPP 299
>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 397 Score = 111 bits (277), Expect = 1e-24 Identities = 53/87 (60%), Positives = 64/87 (73%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FV F+ + LD LVCNAA+Y PTA+ P FTADG E+SVG NHLGHFLL LL++DL+ Sbjct: 153 FVQNFKASGRRLDALVCNAAVYLPTAKEPRFTADGFELSVGTNHLGHFLLTNLLLDDLKN 212 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVPP 453 + R +IVGSITG +TLAGNVPP Sbjct: 213 APNKQPRCIIVGSITGNTNTLAGNVPP 239
>POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 86.7 bits (213), Expect = 3e-17 Identities = 40/86 (46%), Positives = 54/86 (62%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FV FR PL LVCNAA+Y P P ++AD +E+SV NHLGHFLL LL+EDL+ Sbjct: 73 FVAQFRELGRPLKALVCNAAVYFPLLDEPLWSADDYELSVATNHLGHFLLCNLLLEDLKA 132 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVP 450 +R++I+G++T L G +P Sbjct: 133 CPDADKRLIILGTVTANSKELGGKIP 158
>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 85.9 bits (211), Expect = 4e-17 Identities = 38/86 (44%), Positives = 55/86 (63%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FV FR + LD LVCNAA++ P + P + +G+E+SV NH GHFLL LL+EDL+ Sbjct: 73 FVTQFRESGKSLDALVCNAAVHMPLLKEPMRSPEGYELSVATNHFGHFLLCNLLLEDLKH 132 Query: 373 SDYPSRRMVIVGSITGKQHTLAGNVP 450 S + R++I+G++T L G +P Sbjct: 133 STHNDPRLIILGTVTANSKELGGKIP 158
>WWOX_CHICK (Q5F389) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 58.5 bits (140), Expect = 7e-09 Identities = 32/70 (45%), Positives = 44/70 (62%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 F +AF+ MPL +LVCNAAI+ + T DG E + VNHLGHF L +LL ED+ + Sbjct: 193 FAEAFKSKNMPLHILVCNAAIF---GSSWCLTEDGLESTFQVNHLGHFYLVQLL-EDILR 248 Query: 373 SDYPSRRMVI 402 P+R +V+ Sbjct: 249 RSSPARVVVV 258
>DHRSX_HUMAN (Q8N5I4) Dehydrogenase/reductase SDR family member on chromosome X| precursor (EC 1.1.-.-) (DHRSXY) Length = 330 Score = 55.1 bits (131), Expect = 8e-08 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FV F+ ++PL VL+ NA + R T DG E G+N+LGHFLL LL++ L++ Sbjct: 112 FVQKFKMKKIPLHVLINNAGVMMVPQRK---TRDGFEEHFGLNYLGHFLLTNLLLDTLKE 168 Query: 373 SDYP--SRRMVIVGSIT 417 S P S R+V V S T Sbjct: 169 SGSPGHSARVVTVSSAT 185
>WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 54.3 bits (129), Expect = 1e-07 Identities = 32/70 (45%), Positives = 44/70 (62%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 F +AF+ +PL VLVCNAA + A + T DG E + VNHLGHF L +LL + L + Sbjct: 193 FAEAFKAKNVPLHVLVCNAATF---ALPWSLTKDGLETTFQVNHLGHFYLVQLLQDVLCR 249 Query: 373 SDYPSRRMVI 402 S P+R +V+ Sbjct: 250 S-APARVIVV 258
>WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1.1.-) (Fragile| site FRA16D oxidoreductase) Length = 414 Score = 54.3 bits (129), Expect = 1e-07 Identities = 32/70 (45%), Positives = 44/70 (62%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 F +AF+ +PL VLVCNAA + A + T DG E + VNHLGHF L +LL + L + Sbjct: 193 FAEAFKAKNVPLHVLVCNAATF---ALPWSLTKDGLETTFQVNHLGHFYLVQLLQDVLCR 249 Query: 373 SDYPSRRMVI 402 S P+R +V+ Sbjct: 250 S-APARVIVV 258
>RDH11_HUMAN (Q8TC12) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase| 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) Length = 318 Score = 53.1 bits (126), Expect = 3e-07 Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQ 369 F F E L VL+ NA + P ++T ADG EM +GVNHLGHFLL LL+E L+ Sbjct: 110 FAKGFLAEEKHLHVLINNAGVMMCPYSKT----ADGFEMHIGVNHLGHFLLTHLLLEKLK 165 Query: 370 KSDYPSR 390 +S PSR Sbjct: 166 ES-APSR 171
>RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 334 Score = 53.1 bits (126), Expect = 3e-07 Identities = 33/70 (47%), Positives = 40/70 (57%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 F + E LDVL+ NA ++ T T DG EM GVNHLGHFLL LL+ L K Sbjct: 123 FCQELLQEEPRLDVLINNAGVFHCPY---TKTEDGFEMQFGVNHLGHFLLTNLLL-GLLK 178 Query: 373 SDYPSRRMVI 402 S PSR +V+ Sbjct: 179 SSAPSRIVVV 188
>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 336 Score = 52.8 bits (125), Expect = 4e-07 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQ 369 F + E LDVL+ NA I++ P +T DG EM GVNHLGHFLL LL+ L Sbjct: 125 FCQEMLQEEPRLDVLINNAGIFQCPYMKTE----DGFEMQFGVNHLGHFLLTNLLL-GLL 179 Query: 370 KSDYPSRRMVI 402 KS PSR +V+ Sbjct: 180 KSSAPSRIVVV 190
>WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 412 Score = 52.8 bits (125), Expect = 4e-07 Identities = 29/70 (41%), Positives = 43/70 (61%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 F + F+ ++PL VLVCNAA+ R T DG E + + HLGHFLL +LL +D+ + Sbjct: 190 FAELFKATKLPLHVLVCNAAVCSQPWR---LTEDGFESTFQICHLGHFLLVQLL-QDVLR 245 Query: 373 SDYPSRRMVI 402 P+R +V+ Sbjct: 246 LSAPARVVVV 255
>RDH11_MOUSE (Q9QYF1) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase| 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (Short-chain aldehyde dehydrogenase) (SCALD) (Cell line M Length = 316 Score = 51.2 bits (121), Expect = 1e-06 Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQ 369 F F E L +L+ NA + P ++T ADG EM +GVNHLGHFLL LL+E L+ Sbjct: 107 FAKDFLAEEKHLHLLINNAGVMMCPYSKT----ADGFEMHIGVNHLGHFLLTHLLLEKLK 162 Query: 370 KSDYPSR 390 +S PSR Sbjct: 163 ES-APSR 168
>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 331 Score = 49.7 bits (117), Expect = 3e-06 Identities = 29/58 (50%), Positives = 36/58 (62%) Frame = +1 Query: 217 EMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPSR 390 E +D+L+ NA + R T T DG EM GVNHLGHFLL LL++ L K+ PSR Sbjct: 115 EERVDILINNAGVMRCPHWT---TEDGFEMQFGVNHLGHFLLTNLLLDKL-KASAPSR 168
>RDH12_HUMAN (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis| retinol dehydrogenase) Length = 316 Score = 49.7 bits (117), Expect = 3e-06 Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQ 369 F + F E L +L+ NA + P ++T ADG E +GVNHLGHFLL LL+E L+ Sbjct: 108 FAEGFLAEEKQLHILINNAGVMMCPYSKT----ADGFETHLGVNHLGHFLLTYLLLEQLK 163 Query: 370 KSDYPSRRMVIVGSI 414 S R+V V S+ Sbjct: 164 VS--APARVVNVSSV 176
>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 334 Score = 49.7 bits (117), Expect = 3e-06 Identities = 30/60 (50%), Positives = 38/60 (63%) Frame = +1 Query: 211 RAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPSR 390 + E +D+LV NAA+ R T T DG EM GVN+LGHFLL LL++ L K+ PSR Sbjct: 113 KEEERVDILVNNAAVMRCPHWT---TEDGFEMQFGVNYLGHFLLTNLLLDKL-KASAPSR 168
>DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member on chromosome X| homolog precursor (EC 1.1.-.-) (SCAD family protein) (DHRSXY) (Fragment) Length = 280 Score = 49.3 bits (116), Expect = 5e-06 Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIY-RPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQ 369 F F+ +PL +LV NAA+ P A T DG E +GVN LGHFLL LL+ L+ Sbjct: 112 FARDFQALGLPLHLLVNNAAVMLEPRAETE----DGFERHLGVNFLGHFLLTLLLLPALR 167 Query: 370 KSDYPSR--RMVIVGSIT 417 S R R+V VGS T Sbjct: 168 ASGAEGRGSRVVTVGSAT 185
>WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 49.3 bits (116), Expect = 5e-06 Identities = 30/70 (42%), Positives = 41/70 (58%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 F +AF+ + L VLVCNA + A T DG E + VNHLGHF L +LL + L + Sbjct: 193 FAEAFKAKNVSLHVLVCNAGTF---ALPWGLTKDGLETTFQVNHLGHFYLVQLLQDVLCR 249 Query: 373 SDYPSRRMVI 402 S P+R +V+ Sbjct: 250 SS-PARVIVV 258
>OXIR_STRLI (P35320) Probable oxidoreductase (EC 1.-.-.-)| Length = 297 Score = 47.0 bits (110), Expect = 2e-05 Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = +1 Query: 196 VDAFRRA-EMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 VD+F RA PLD+LV NA I RT T G EM + N+LGHF LA L L+ Sbjct: 70 VDSFARAWRGPLDILVANAGIMALPTRT--LTPYGWEMQLATNYLGHFALATGLHAALR- 126 Query: 373 SDYPSRRMVIVGS 411 D S R+V+V S Sbjct: 127 -DAGSARIVVVSS 138
>RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-)| Length = 316 Score = 46.6 bits (109), Expect = 3e-05 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQ 369 F + F E L +L+ NA + P ++T DG E GVNHLGHFLL LL+E L+ Sbjct: 108 FAERFLAEEKKLHILINNAGVMMCPYSKT----TDGFETHFGVNHLGHFLLTYLLLERLK 163 Query: 370 KS 375 +S Sbjct: 164 ES 165
>OXIR_STRAT (Q03326) Probable oxidoreductase (EC 1.-.-.-)| Length = 298 Score = 45.1 bits (105), Expect = 8e-05 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = +1 Query: 196 VDAFRRA-EMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 V++F RA PLD+LV NA I RT +G EM + N+LGHF LA L L+ Sbjct: 71 VESFARAWRGPLDILVANAGIMALPTRT--LAPNGWEMQLATNYLGHFALATGLHAALR- 127 Query: 373 SDYPSRRMVIVGS 411 D S R+V+V S Sbjct: 128 -DAGSARIVVVSS 139
>RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Double substrate| specificity short chain dehydrogenase/reductase 2) Length = 316 Score = 44.7 bits (104), Expect = 1e-04 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQ 369 F + F E L +L+ NA + P ++T ADG E + VNHLGHFLL LL+ L+ Sbjct: 108 FAEGFLAEEKQLHILINNAGVMLCPYSKT----ADGFETHLAVNHLGHFLLTHLLLGRLK 163 Query: 370 KS 375 +S Sbjct: 164 ES 165
>WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 409 Score = 36.2 bits (82), Expect = 0.039 Identities = 25/70 (35%), Positives = 39/70 (55%) Frame = +1 Query: 193 FVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQK 372 FV+ +++ +D L+ NA ++ A T T DG E + V+HL HF L L +E L Sbjct: 192 FVEEIKQSVSHIDYLILNAGVF---ALPYTRTVDGLETTFQVSHLSHFYLT-LQLETL-- 245 Query: 373 SDYPSRRMVI 402 DY +R +V+ Sbjct: 246 FDYKTRIIVL 255
>BLI4_NEUCR (Q92247) Putative oxidoreductase bli-4, mitochondrial precursor (EC| 1.-.-.-) Length = 412 Score = 32.3 bits (72), Expect = 0.57 Identities = 21/71 (29%), Positives = 35/71 (49%) Frame = +1 Query: 226 LDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPSRRMVIV 405 LD+LV N+ TA ++ D H + NH+GH +L L+ LQK+ + V + Sbjct: 180 LDILVNNSGRGIMTAGLTSYGVDKH---MATNHMGHVVLTSHLLPLLQKTAEETGETVRI 236 Query: 406 GSITGKQHTLA 438 + + H+ A Sbjct: 237 SNQSSNLHSAA 247
>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 366 Score = 30.8 bits (68), Expect = 1.7 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = -2 Query: 189 PDAAVSFTATA--PMLLPFLGTERVEGRSWRAMGDGELGLSLASTALQEFNELEL 31 PD AV+ +A L F+G+E VEG S + + E L L++ +ELEL Sbjct: 238 PDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYDHNLLRKVDELEL 292
>TAB3_MOUSE (Q571K4) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 (TAK1-binding protein 3) Length = 716 Score = 28.9 bits (63), Expect = 6.3 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 11/71 (15%) Frame = +2 Query: 113 LPSTLSVPKKGSSMGA-VAVKDTAASGSSLTRS-------AAPRCRWMCWCA-TPPSTGP 265 LP T S KGS + V+ + G+++TRS +PR + + A TPPS+ P Sbjct: 355 LPYTASSLPKGSMKKIEITVEPSQRPGTAITRSPSPISNQPSPRNQHSLYTATTPPSSSP 414 Query: 266 RR--ARRPSPP 292 R + +P PP Sbjct: 415 SRGISSQPKPP 425
>PCY1A_RAT (P19836) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +2 Query: 140 KGSSMGAVAVKDTAASGSSLTRSAAPRCRWMCWCATPPSTGPRRARR 280 KG + A++ K + +S + RS +P RW T PS+ P R Sbjct: 307 KGRMLQAISPKQSPSSSPTHERSPSPSFRWPFSGKTSPSSSPASLSR 353
>PCY1A_MOUSE (P49586) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +2 Query: 140 KGSSMGAVAVKDTAASGSSLTRSAAPRCRWMCWCATPPSTGPRRARR 280 KG + A++ K + +S + RS +P RW T PS+ P R Sbjct: 307 KGRMLQAISPKQSPSSSPTHERSPSPSFRWPFSGKTSPSSSPASLSR 353
>CSMD2_HUMAN (Q7Z408) CUB and sushi domain-containing protein 2 (CUB and sushi| multiple domains protein 2) Length = 3487 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 194 SLTRSAAPRCRWMCWCATPPSTGPRRARRPSPPT 295 S TR+ P + W TPP P R+P PT Sbjct: 3167 STTRTCLPN---LTWSGTPPDCVPHHCRQPETPT 3197
>DHB7_RAT (Q62904) 3-keto-steroid reductase (EC 1.1.1.270) (Estradiol| 17-beta-dehydrogenase 7) (EC 1.1.1.62) (17-beta-HSD 7) (17-beta-hydroxysteroid dehydrogenase 7) (PRL receptor-associated protein) (PRAP) Length = 334 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +1 Query: 286 TADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPSR 390 TADG + N GHF+L R L L SD PS+ Sbjct: 131 TADGFQEVFETNLFGHFILIRELEPLLCHSDNPSQ 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,970,160 Number of Sequences: 219361 Number of extensions: 666022 Number of successful extensions: 2808 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2678 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2802 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
