| Clone Name | bast50c06 |
|---|---|
| Clone Library Name | barley_pub |
>DEND_HUMAN (O94850) Dendrin| Length = 657 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = -1 Query: 166 GTWRGLREGQGMWEGSTGFGLARA 95 G W GLR+GQG+ GS G G ARA Sbjct: 229 GAW-GLRQGQGLLGGSPGCGAARA 251
>BCTN7_BOVIN (P19661) Bactenecin-7 precursor (Bac7) (Cathelicidin-3) (PR-59)| Length = 190 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +3 Query: 90 PSARAKPNPVEPSHIPCPSRKPRHVPHREVAPRPHAQDLRRPL 218 P R P P+ P +P P PR +P PRP + + RPL Sbjct: 149 PFPRPGPRPI-PRPLPFPRPGPRPIPRPLPFPRPGPRPIPRPL 190 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +3 Query: 84 LKPSARAKPNPVEPSHIPCPSRKPRHVPHREVAPRPHAQDLRRPL 218 ++P P P P +P P PR +P PRP + + RPL Sbjct: 133 IRPRPPRLPRP-RPRPLPFPRPGPRPIPRPLPFPRPGPRPIPRPL 176
>TONB_SERMA (P26185) Protein tonB| Length = 247 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +3 Query: 90 PSARAKPNPVEPSHIPCPSRKPRHVPHREVAPRPHAQDLRRP 215 P A KP PV+P P KP+ ++V P P + R P Sbjct: 91 PKAIVKPEPVKPK----PKPKPKPKVEKQVKPEPKKVEPREP 128
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +3 Query: 90 PSARAKPNPVEPSH-IPCPSRKPRHVPHREVAPRP 191 P A A P PS P PS+ PR P + APRP Sbjct: 103 PKAPAAQQPAAPSAPAPAPSQGPRPTPGPKPAPRP 137
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 29.3 bits (64), Expect = 4.1 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = +3 Query: 90 PSARAKPNPVEPSHIPCPSRKPRHVPHREVAPRPHAQDLRRP 215 P R+ P+P PS P PS P P P P + P Sbjct: 154 PPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRKRSPASP 195
>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell| death-associated gene 51 protein) (Apoptosis-associated nuclear protein) (Proline- and histidine-rich protein) (Proline- and glutamine-rich protein) (PQ-rich protein) Length = 259 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/46 (30%), Positives = 18/46 (39%) Frame = +3 Query: 87 KPSARAKPNPVEPSHIPCPSRKPRHVPHREVAPRPHAQDLRRPLLH 224 +P + KP P + P P P PH P PH + P H Sbjct: 194 QPQPQPKPQPQQLHPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPH 239
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +3 Query: 90 PSARAKPNPVEPSHIPCPSRKPRHVPHREVAP 185 PSA P+P+ P P PS P P +++ P Sbjct: 581 PSAARAPSPLPPQQQPLPSATPAPPPAQQLPP 612
>DPOL_HHV1A (P07917) DNA polymerase (EC 2.7.7.7)| Length = 1235 Score = 28.5 bits (62), Expect = 7.1 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +3 Query: 114 PVEPSHIPCPSRKPRHVPHREVAP 185 P P+ +PCP+++PR P P Sbjct: 1105 PAPPAALPCPAKRPRETPSHADPP 1128
>HMW3_MYCGE (Q57081) Cytadherence high molecular weight protein 3 (Cytadherence| accessory protein 3) (Accessory adhesin protein 3) (P69) Length = 599 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 16/53 (30%) Frame = +3 Query: 81 LLKPSARAKPNPVEPSHI---PCPSRKP-------------RHVPHREVAPRP 191 +++P KP SH+ P P KP +HVPH EV P+P Sbjct: 267 IVEPKIEPKPEVKHVSHVEIQPKPEVKPVVDSVPEVKQPEVKHVPHVEVQPKP 319
>VG66_ICHV1 (Q00154) Hypothetical gene 66 protein| Length = 411 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +3 Query: 141 PSRKPRHVPHREVAPRPHAQDLRRPLLHL 227 P+ +P VP R V PRP L PL L Sbjct: 48 PTGRPIPVPRRRVRPRPAEDQLEEPLEEL 76
>NEST_RAT (P21263) Nestin| Length = 1805 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3 Query: 138 CPSRKPRHVPHREVAPRPHAQDLRRPL 218 C R+P PHR P P +DL R L Sbjct: 157 CAPRRPPAPPHRIPGPAPEVEDLARRL 183
>EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril interface-located| protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10) Length = 1053 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +3 Query: 87 KPSARAKPNPVEPSHIPCPSRKPRHVPHREVAPRPHAQDLRRPLL 221 +PSA+A P+P P+ P +P P R P RRP+L Sbjct: 783 QPSAKA-PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVL 826
>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4| precursor (LTBP-4) Length = 1666 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +3 Query: 90 PSARAKPNPVEPSHIPCPSRKPRHVPHREVAPRPHAQDLRRP 215 P + +P P P P P +PR P PRP + RP Sbjct: 515 PGPQPEPRP-RPEPRPRPESRPRPEPRPRPEPRPQPESQPRP 555 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,935,304 Number of Sequences: 219361 Number of extensions: 428704 Number of successful extensions: 2109 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1849 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2043 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)