ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CJ095_HUMAN (Q9H7T3) Protein C10orf95 32 0.85
2MOT3_RAT (O70461) Monocarboxylate transporter 3 (MCT 3) 29 5.5
3MOT3_MOUSE (O35308) Monocarboxylate transporter 3 (MCT 3) (Proto... 29 5.5
4PRAX_RAT (Q63425) Periaxin 28 9.4

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 23/62 (37%), Positives = 28/62 (45%)
 Frame = +1

Query: 148 RPAMVTEGTPTSFSWHRGDTRKRRTARYCSCARHSAWPRRSSAFYTTSRPVASSAWPGSS 327
           RP M T G   +    R   R+RR     SC+    WP      Y  SRP AS+A PG+ 
Sbjct: 45  RPCMCTAGRRPN----RASGRRRR-----SCSPAPTWP--PLCCYPQSRPTASAAGPGAC 93

Query: 328 SR 333
            R
Sbjct: 94  MR 95



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>MOT3_RAT (O70461) Monocarboxylate transporter 3 (MCT 3)|
          Length = 492

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 294 AGSVLGVARVLFAAANERCLRCMSQAALGRSVTG 395
           AGS + +A V  A     CLRC    + GRS  G
Sbjct: 392 AGSEVALAGVFMAVTTYCCLRCSKNISSGRSAEG 425



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>MOT3_MOUSE (O35308) Monocarboxylate transporter 3 (MCT 3) (Proton-coupled|
           monocarboxylate transporter 3)
          Length = 492

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 294 AGSVLGVARVLFAAANERCLRCMSQAALGRSVTG 395
           AGS + +A V  A     CLRC    + GRS  G
Sbjct: 392 AGSEVALAGVFMAVTTYCCLRCSKNISSGRSAEG 425



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>PRAX_RAT (Q63425) Periaxin|
          Length = 1383

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 23/82 (28%), Positives = 34/82 (41%)
 Frame = -2

Query: 401 EGAGDAAPERRLAHAPQAPLVGRREEDPGHAEDATGRDVV*NADERRGHAECRAHEQYRA 222
           +G   AAP RR    P+     R  E    A+ A        + + +  AE      + A
Sbjct: 176 KGPVPAAPARRRLQLPRL----RVREVAEEAQVARMAAAAPPSRKAKSEAEVATGAGFTA 231

Query: 221 VRLLRVSPRCQEKEVGVPSVTI 156
            ++  V PR    EVGVP V++
Sbjct: 232 PQIELVGPRLPSAEVGVPKVSV 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,377,836
Number of Sequences: 219361
Number of extensions: 773822
Number of successful extensions: 2311
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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