ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50c11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ277097.1|HVU277097 Hordeum vulgare mRNA for putative kinetochore protein (cbf5 gene) Length = 1265 Score = 892 bits (450), Expect = 0.0 Identities = 452/453 (99%) Strand = Plus / Plus Query: 1 agaagagcaaatccaaggatgcctcctccgaccccgccgccgataccacgtcgctggcag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 agaagagcaaatccaaggatgcctcctccgaccccgccgccgataccacgtcgctggcag 156 Query: 61 acgcggaggcgaagaccgatgggtacatgatcaagccccaggccctggttccgtccctcg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 acgcggaggcgaagaccgatgggtacatgatcaagccccaggccctggttccgtccctcg 216 Query: 121 acacctccacctggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 acacctccacctggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggcc 276 Query: 181 actacaccccgctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 actacaccccgctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttc 336 Query: 241 gctatggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gctatggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgt 396 Query: 301 ggatcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaagg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 ggatcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaagg 456 Query: 361 tcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagg 420 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 457 tcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctngtcaagtcgcagcagg 516 Query: 421 gcgcaggtaaggagtatgtgtgcatcgcccgct 453 ||||||||||||||||||||||||||||||||| Sbjct: 517 gcgcaggtaaggagtatgtgtgcatcgcccgct 549
>ref|XM_479248.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2100 Score = 521 bits (263), Expect = e-145 Identities = 359/391 (91%) Strand = Plus / Plus Query: 63 gcggaggcgaagaccgatgggtacatgatcaagccccaggccctggttccgtccctcgac 122 ||||||||||||||||| || ||| | |||||||| ||| | ||||| || ||||||||| Sbjct: 157 gcggaggcgaagaccgacggctacctcatcaagccgcagtcgctggtcccctccctcgac 216 Query: 123 acctccacctggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccac 182 ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 217 acctcgacatggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccac 276 Query: 183 tacaccccgctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgc 242 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 277 tacaccccgctcccctccggccactcgccgctcaagcgccccatcgccgagtacctccgc 336 Query: 243 tatggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtgg 302 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || || ||| Sbjct: 337 tacggcgtcatcaacctcgacaagccctccaacccctcctcgcacgaggtcgtcgcctgg 396 Query: 303 atcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtc 362 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 397 atcaagcgcctcctccgcgtcgacaagaccggccacagcggcacgctcgaccccaaggtc 456 Query: 363 accggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggc 422 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 457 accggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcgcagcagggc 516 Query: 423 gcaggtaaggagtatgtgtgcatcgcccgct 453 || || |||||||| || ||| |||| |||| Sbjct: 517 gccggcaaggagtacgtctgcgtcgcgcgct 547
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 521 bits (263), Expect = e-145 Identities = 359/391 (91%) Strand = Plus / Minus Query: 63 gcggaggcgaagaccgatgggtacatgatcaagccccaggccctggttccgtccctcgac 122 ||||||||||||||||| || ||| | |||||||| ||| | ||||| || ||||||||| Sbjct: 26355065 gcggaggcgaagaccgacggctacctcatcaagccgcagtcgctggtcccctccctcgac 26355006 Query: 123 acctccacctggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccac 182 ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 26355005 acctcgacatggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccac 26354946 Query: 183 tacaccccgctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgc 242 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 26354945 tacaccccgctcccctccggccactcgccgctcaagcgccccatcgccgagtacctccgc 26354886 Query: 243 tatggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtgg 302 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || || ||| Sbjct: 26354885 tacggcgtcatcaacctcgacaagccctccaacccctcctcgcacgaggtcgtcgcctgg 26354826 Query: 303 atcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtc 362 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 26354825 atcaagcgcctcctccgcgtcgacaagaccggccacagcggcacgctcgaccccaaggtc 26354766 Query: 363 accggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggc 422 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 26354765 accggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcgcagcagggc 26354706 Query: 423 gcaggtaaggagtatgtgtgcatcgcccgct 453 || || |||||||| || ||| |||| |||| Sbjct: 26354705 gccggcaaggagtacgtctgcgtcgcgcgct 26354675
>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_D11 Length = 109399 Score = 521 bits (263), Expect = e-145 Identities = 359/391 (91%) Strand = Plus / Minus Query: 63 gcggaggcgaagaccgatgggtacatgatcaagccccaggccctggttccgtccctcgac 122 ||||||||||||||||| || ||| | |||||||| ||| | ||||| || ||||||||| Sbjct: 9305 gcggaggcgaagaccgacggctacctcatcaagccgcagtcgctggtcccctccctcgac 9246 Query: 123 acctccacctggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccac 182 ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9245 acctcgacatggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccac 9186 Query: 183 tacaccccgctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgc 242 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 9185 tacaccccgctcccctccggccactcgccgctcaagcgccccatcgccgagtacctccgc 9126 Query: 243 tatggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtgg 302 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || || ||| Sbjct: 9125 tacggcgtcatcaacctcgacaagccctccaacccctcctcgcacgaggtcgtcgcctgg 9066 Query: 303 atcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtc 362 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 9065 atcaagcgcctcctccgcgtcgacaagaccggccacagcggcacgctcgaccccaaggtc 9006 Query: 363 accggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggc 422 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 9005 accggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcgcagcagggc 8946 Query: 423 gcaggtaaggagtatgtgtgcatcgcccgct 453 || || |||||||| || ||| |||| |||| Sbjct: 8945 gccggcaaggagtacgtctgcgtcgcgcgct 8915
>dbj|AK102460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094C11, full insert sequence Length = 2100 Score = 521 bits (263), Expect = e-145 Identities = 359/391 (91%) Strand = Plus / Plus Query: 63 gcggaggcgaagaccgatgggtacatgatcaagccccaggccctggttccgtccctcgac 122 ||||||||||||||||| || ||| | |||||||| ||| | ||||| || ||||||||| Sbjct: 157 gcggaggcgaagaccgacggctacctcatcaagccgcagtcgctggtcccctccctcgac 216 Query: 123 acctccacctggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccac 182 ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 217 acctcgacatggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccac 276 Query: 183 tacaccccgctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgc 242 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 277 tacaccccgctcccctccggccactcgccgctcaagcgccccatcgccgagtacctccgc 336 Query: 243 tatggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtgg 302 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || || ||| Sbjct: 337 tacggcgtcatcaacctcgacaagccctccaacccctcctcgcacgaggtcgtcgcctgg 396 Query: 303 atcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtc 362 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 397 atcaagcgcctcctccgcgtcgacaagaccggccacagcggcacgctcgaccccaaggtc 456 Query: 363 accggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggc 422 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 457 accggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcgcagcagggc 516 Query: 423 gcaggtaaggagtatgtgtgcatcgcccgct 453 || || |||||||| || ||| |||| |||| Sbjct: 517 gccggcaaggagtacgtctgcgtcgcgcgct 547
>ref|NM_184594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1776 Score = 440 bits (222), Expect = e-120 Identities = 297/322 (92%) Strand = Plus / Plus Query: 132 tggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 191 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 tggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 267 Query: 192 ctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgctatggcgtc 251 |||||| |||||||||| ||||||||||| ||| ||||||||||||| ||||| |||||| Sbjct: 268 ctccccgccggccactccccgctcaagcggcccatcgccgagtacctccgctacggcgtc 327 Query: 252 atcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgc 311 ||||||||||||||||| || ||||||||||| |||||||| || || |||||||||||| Sbjct: 328 atcaacctcgacaagccgtcgaacccttcctcgcacgaggtcgtcgcctggatcaagcgc 387 Query: 312 ctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 388 ctcctccgcgtcgagaagaccggccacagcggcacccttgaccccaaggtcaccggcaac 447 Query: 372 ctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggtaag 431 ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 448 ctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcccagcagggcgccggcaag 507 Query: 432 gagtatgtgtgcatcgcccgct 453 ||||| || ||| |||| |||| Sbjct: 508 gagtacgtctgcgtcgcgcgct 529
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 440 bits (222), Expect = e-120 Identities = 297/322 (92%) Strand = Plus / Plus Query: 132 tggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 191 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14384185 tggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 14384244 Query: 192 ctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgctatggcgtc 251 |||||| |||||||||| ||||||||||| ||| ||||||||||||| ||||| |||||| Sbjct: 14384245 ctccccgccggccactccccgctcaagcggcccatcgccgagtacctccgctacggcgtc 14384304 Query: 252 atcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgc 311 ||||||||||||||||| || ||||||||||| |||||||| || || |||||||||||| Sbjct: 14384305 atcaacctcgacaagccgtcgaacccttcctcgcacgaggtcgtcgcctggatcaagcgc 14384364 Query: 312 ctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 14384365 ctcctccgcgtcgagaagaccggccacagcggcacccttgaccccaaggtcaccggcaac 14384424 Query: 372 ctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggtaag 431 ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 14384425 ctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcccagcagggcgccggcaag 14384484 Query: 432 gagtatgtgtgcatcgcccgct 453 ||||| || ||| |||| |||| Sbjct: 14384485 gagtacgtctgcgtcgcgcgct 14384506 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gcctcctccgaccccgccgcc 41 ||||||||||||||||||||| Sbjct: 28291490 gcctcctccgaccccgccgcc 28291470
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 440 bits (222), Expect = e-120 Identities = 297/322 (92%) Strand = Plus / Plus Query: 132 tggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 191 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133414 tggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 133473 Query: 192 ctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgctatggcgtc 251 |||||| |||||||||| ||||||||||| ||| ||||||||||||| ||||| |||||| Sbjct: 133474 ctccccgccggccactccccgctcaagcggcccatcgccgagtacctccgctacggcgtc 133533 Query: 252 atcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgc 311 ||||||||||||||||| || ||||||||||| |||||||| || || |||||||||||| Sbjct: 133534 atcaacctcgacaagccgtcgaacccttcctcgcacgaggtcgtcgcctggatcaagcgc 133593 Query: 312 ctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 133594 ctcctccgcgtcgagaagaccggccacagcggcacccttgaccccaaggtcaccggcaac 133653 Query: 372 ctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggtaag 431 ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 133654 ctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcccagcagggcgccggcaag 133713 Query: 432 gagtatgtgtgcatcgcccgct 453 ||||| || ||| |||| |||| Sbjct: 133714 gagtacgtctgcgtcgcgcgct 133735
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 440 bits (222), Expect = e-120 Identities = 297/322 (92%) Strand = Plus / Plus Query: 132 tggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 191 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14379160 tggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 14379219 Query: 192 ctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgctatggcgtc 251 |||||| |||||||||| ||||||||||| ||| ||||||||||||| ||||| |||||| Sbjct: 14379220 ctccccgccggccactccccgctcaagcggcccatcgccgagtacctccgctacggcgtc 14379279 Query: 252 atcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgc 311 ||||||||||||||||| || ||||||||||| |||||||| || || |||||||||||| Sbjct: 14379280 atcaacctcgacaagccgtcgaacccttcctcgcacgaggtcgtcgcctggatcaagcgc 14379339 Query: 312 ctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 14379340 ctcctccgcgtcgagaagaccggccacagcggcacccttgaccccaaggtcaccggcaac 14379399 Query: 372 ctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggtaag 431 ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 14379400 ctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcccagcagggcgccggcaag 14379459 Query: 432 gagtatgtgtgcatcgcccgct 453 ||||| || ||| |||| |||| Sbjct: 14379460 gagtacgtctgcgtcgcgcgct 14379481 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gcctcctccgaccccgccgcc 41 ||||||||||||||||||||| Sbjct: 28382814 gcctcctccgaccccgccgcc 28382794
>dbj|AK103723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138C07, full insert sequence Length = 1987 Score = 440 bits (222), Expect = e-120 Identities = 297/322 (92%) Strand = Plus / Plus Query: 132 tggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 191 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 tggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 346 Query: 192 ctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgctatggcgtc 251 |||||| |||||||||| ||||||||||| ||| ||||||||||||| ||||| |||||| Sbjct: 347 ctccccgccggccactccccgctcaagcggcccatcgccgagtacctccgctacggcgtc 406 Query: 252 atcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgc 311 ||||||||||||||||| || ||||||||||| |||||||| || || |||||||||||| Sbjct: 407 atcaacctcgacaagccgtcgaacccttcctcgcacgaggtcgtcgcctggatcaagcgc 466 Query: 312 ctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 467 ctcctccgcgtcgagaagaccggccacagcggcacccttgaccccaaggtcaccggcaac 526 Query: 372 ctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggtaag 431 ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 527 ctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcccagcagggcgccggcaag 586 Query: 432 gagtatgtgtgcatcgcccgct 453 ||||| || ||| |||| |||| Sbjct: 587 gagtacgtctgcgtcgcgcgct 608
>dbj|AK063289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-E01, full insert sequence Length = 2185 Score = 440 bits (222), Expect = e-120 Identities = 297/322 (92%) Strand = Plus / Plus Query: 132 tggccgctccttctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 191 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 tggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccg 345 Query: 192 ctcccctccggccactcgccgctcaagcgacccctcgccgagtaccttcgctatggcgtc 251 |||||| |||||||||| ||||||||||| ||| ||||||||||||| ||||| |||||| Sbjct: 346 ctccccgccggccactccccgctcaagcggcccatcgccgagtacctccgctacggcgtc 405 Query: 252 atcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgc 311 ||||||||||||||||| || ||||||||||| |||||||| || || |||||||||||| Sbjct: 406 atcaacctcgacaagccgtcgaacccttcctcgcacgaggtcgtcgcctggatcaagcgc 465 Query: 312 ctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 466 ctcctccgcgtcgagaagaccggccacagcggcacccttgaccccaaggtcaccggcaac 525 Query: 372 ctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggtaag 431 ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 526 ctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcccagcagggcgccggcaag 585 Query: 432 gagtatgtgtgcatcgcccgct 453 ||||| || ||| |||| |||| Sbjct: 586 gagtacgtctgcgtcgcgcgct 607
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 297 gcgtggatcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgacccc 356 |||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||| Sbjct: 72974 gcgtggatcaagcgcctcctccgcgtcaacaagaccgggcacagcggcacgctcgatccc 72915 Query: 357 aaggtcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcag 416 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 72914 aaggtcaccggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcgcag 72855 Query: 417 cagggcgcaggtaaggagtatgtgtgcatcgcccgct 453 |||||||| || |||||||| || ||| |||| |||| Sbjct: 72854 cagggcgccggcaaggagtacgtctgcgtcgcgcgct 72818
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 297 gcgtggatcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgacccc 356 |||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||| Sbjct: 29006316 gcgtggatcaagcgcctcctccgcgtcaacaagaccgggcacagcggcacgctcgatccc 29006257 Query: 357 aaggtcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcag 416 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 29006256 aaggtcaccggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcgcag 29006197 Query: 417 cagggcgcaggtaaggagtatgtgtgcatcgcccgct 453 |||||||| || |||||||| || ||| |||| |||| Sbjct: 29006196 cagggcgccggcaaggagtacgtctgcgtcgcgcgct 29006160
>dbj|AK109276.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-A12, full insert sequence Length = 599 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 297 gcgtggatcaagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgacccc 356 |||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||| Sbjct: 311 gcgtggatcaagcgcctcctccgcgtcaacaagaccgggcacagcggcacgctcgatccc 252 Query: 357 aaggtcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcag 416 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 251 aaggtcaccggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcgcag 192 Query: 417 cagggcgcaggtaaggagtatgtgtgcatcgcccgct 453 |||||||| || |||||||| || ||| |||| |||| Sbjct: 191 cagggcgccggcaaggagtacgtctgcgtcgcgcgct 155
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 196 bits (99), Expect = 4e-47 Identities = 135/147 (91%) Strand = Plus / Plus Query: 290 ggtggtggcgtggatcaagcgcctcctccgcgttgagaagaccggccacagcggcacgct 349 |||||| |||||||||||||||||||||||||| | ||||| || |||||||||||||| Sbjct: 56297 ggtggtcgcgtggatcaagcgcctcctccgcgtcaacaagactgggcacagcggcacgct 56356 Query: 350 cgaccccaaggtcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaa 409 ||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| Sbjct: 56357 cgatcccaaggtcaccggcaacctcatcgtctgcgtcgacctcgccacccgcctcgtcaa 56416 Query: 410 gtcgcagcagggcgcaggtaaggagta 436 ||||||||||||||| || |||||||| Sbjct: 56417 gtcgcagcagggcgccggcaaggagta 56443
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 196 bits (99), Expect = 4e-47 Identities = 135/147 (91%) Strand = Plus / Plus Query: 290 ggtggtggcgtggatcaagcgcctcctccgcgttgagaagaccggccacagcggcacgct 349 |||||| |||||||||||||||||||||||||| | ||||| || |||||||||||||| Sbjct: 22018301 ggtggtcgcgtggatcaagcgcctcctccgcgtcaacaagactgggcacagcggcacgct 22018360 Query: 350 cgaccccaaggtcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaa 409 ||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| Sbjct: 22018361 cgatcccaaggtcaccggcaacctcatcgtctgcgtcgacctcgccacccgcctcgtcaa 22018420 Query: 410 gtcgcagcagggcgcaggtaaggagta 436 ||||||||||||||| || |||||||| Sbjct: 22018421 gtcgcagcagggcgccggcaaggagta 22018447 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 178 gccactacaccccgctcccctcc 200 ||||||||||||||||||||||| Sbjct: 18054782 gccactacaccccgctcccctcc 18054804
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 196 bits (99), Expect = 4e-47 Identities = 135/147 (91%) Strand = Plus / Plus Query: 290 ggtggtggcgtggatcaagcgcctcctccgcgttgagaagaccggccacagcggcacgct 349 |||||| |||||||||||||||||||||||||| | ||||| || |||||||||||||| Sbjct: 22328212 ggtggtcgcgtggatcaagcgcctcctccgcgtcaacaagactgggcacagcggcacgct 22328271 Query: 350 cgaccccaaggtcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaa 409 ||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| Sbjct: 22328272 cgatcccaaggtcaccggcaacctcatcgtctgcgtcgacctcgccacccgcctcgtcaa 22328331 Query: 410 gtcgcagcagggcgcaggtaaggagta 436 ||||||||||||||| || |||||||| Sbjct: 22328332 gtcgcagcagggcgccggcaaggagta 22328358 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 178 gccactacaccccgctcccctcc 200 ||||||||||||||||||||||| Sbjct: 18145197 gccactacaccccgctcccctcc 18145219
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 145 bits (73), Expect = 1e-31 Identities = 145/169 (85%) Strand = Plus / Plus Query: 285 cacgaggtggtggcgtggatcaagcgcctcctccgcgttgagaagaccggccacagcggc 344 |||||||||||||| ||| |||||||| | || ||||| |||||||| |||||||||||| Sbjct: 4751 cacgaggtggtggcatgggtcaagcgcatgctgcgcgtcgagaagacgggccacagcggc 4810 Query: 345 acgctcgaccccaaggtcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctc 404 || || || |||||||| || ||||||||||||||||| |||||||||| || ||||| Sbjct: 4811 accctggatcccaaggtgacgggcaacctcatcgtctgtatcgaccgcgccacgcgcctg 4870 Query: 405 gtcaagtcgcagcagggcgcaggtaaggagtatgtgtgcatcgcccgct 453 || ||| ||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 4871 gtgaaggcgcagcaggcggcgggtaaggagtacgtgtgcatcgcgcgct 4919 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 162 ctcaacgtccgcaccggccactacac 187 ||||| |||||||||||||||||||| Sbjct: 4628 ctcaatgtccgcaccggccactacac 4653
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 145 bits (73), Expect = 1e-31 Identities = 145/169 (85%) Strand = Plus / Plus Query: 285 cacgaggtggtggcgtggatcaagcgcctcctccgcgttgagaagaccggccacagcggc 344 |||||||||||||| ||| |||||||| | || ||||| |||||||| |||||||||||| Sbjct: 64733 cacgaggtggtggcatgggtcaagcgcatgctgcgcgtcgagaagacgggccacagcggc 64792 Query: 345 acgctcgaccccaaggtcaccggcaacctcatcgtctgcgtcgaccgcgcaacacgcctc 404 || || || |||||||| || ||||||||||||||||| |||||||||| || ||||| Sbjct: 64793 accctggatcccaaggtgacgggcaacctcatcgtctgtatcgaccgcgccacgcgcctg 64852 Query: 405 gtcaagtcgcagcagggcgcaggtaaggagtatgtgtgcatcgcccgct 453 || ||| ||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 64853 gtgaaggcgcagcaggcggcgggtaaggagtacgtgtgcatcgcgcgct 64901 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 162 ctcaacgtccgcaccggccactacac 187 ||||| |||||||||||||||||||| Sbjct: 64610 ctcaatgtccgcaccggccactacac 64635
>gb|BC099832.1| Rattus norvegicus dyskeratosis congenita 1, dyskerin, mRNA (cDNA clone MGC:124569 IMAGE:7934021), complete cds Length = 1857 Score = 139 bits (70), Expect = 9e-30 Identities = 160/190 (84%) Strand = Plus / Plus Query: 250 tcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagc 309 |||||||||| ||||||||||||||||| || || |||||||| ||||| |||||| | Sbjct: 323 tcatcaacctggacaagccatccaacccctcttcgcacgaggtcgtggcctggatccgcc 382 Query: 310 gcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggca 369 || |||| ||||| |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 383 gcatcctgcgcgtggagaagacggggcacagcgggacacttgaccccaaggtcaccgggt 442 Query: 370 acctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggta 429 ||||||||||||| |||| ||||| || ||||| |||||||| |||||| |||| || | Sbjct: 443 gcctcatcgtctgcatcgagcgcgccacgcgcctggtcaagtcacagcagagcgcgggca 502 Query: 430 aggagtatgt 439 | |||||||| Sbjct: 503 aagagtatgt 512
>ref|NM_133419.1| Rattus norvegicus dyskeratosis congenita 1, dyskerin (Dkc1), mRNA Length = 1803 Score = 139 bits (70), Expect = 9e-30 Identities = 160/190 (84%) Strand = Plus / Plus Query: 250 tcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagc 309 |||||||||| ||||||||||||||||| || || |||||||| ||||| |||||| | Sbjct: 365 tcatcaacctggacaagccatccaacccctcttcgcacgaggtcgtggcctggatccgcc 424 Query: 310 gcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggca 369 || |||| ||||| |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 425 gcatcctgcgcgtggagaagacggggcacagcgggacacttgaccccaaggtcaccgggt 484 Query: 370 acctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggta 429 ||||||||||||| |||| ||||| || ||||| |||||||| |||||| |||| || | Sbjct: 485 gcctcatcgtctgcatcgagcgcgccacgcgcctggtcaagtcacagcagagcgcgggca 544 Query: 430 aggagtatgt 439 | |||||||| Sbjct: 545 aagagtatgt 554
>gb|BC087600.1| Rattus norvegicus dyskeratosis congenita 1, dyskerin, mRNA (cDNA clone IMAGE:7314767) Length = 1550 Score = 139 bits (70), Expect = 9e-30 Identities = 160/190 (84%) Strand = Plus / Plus Query: 250 tcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagc 309 |||||||||| ||||||||||||||||| || || |||||||| ||||| |||||| | Sbjct: 324 tcatcaacctggacaagccatccaacccctcttcgcacgaggtcgtggcctggatccgcc 383 Query: 310 gcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggca 369 || |||| ||||| |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 384 gcatcctgcgcgtggagaagacggggcacagcgggacacttgaccccaaggtcaccgggt 443 Query: 370 acctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggta 429 ||||||||||||| |||| ||||| || ||||| |||||||| |||||| |||| || | Sbjct: 444 gcctcatcgtctgcatcgagcgcgccacgcgcctggtcaagtcacagcagagcgcgggca 503 Query: 430 aggagtatgt 439 | |||||||| Sbjct: 504 aagagtatgt 513
>emb|Z34922.1|RNNAP57 R.norvegicus mRNA for nucleolar protein NAP57 Length = 1803 Score = 139 bits (70), Expect = 9e-30 Identities = 160/190 (84%) Strand = Plus / Plus Query: 250 tcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagc 309 |||||||||| ||||||||||||||||| || || |||||||| ||||| |||||| | Sbjct: 365 tcatcaacctggacaagccatccaacccctcttcgcacgaggtcgtggcctggatccgcc 424 Query: 310 gcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggca 369 || |||| ||||| |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 425 gcatcctgcgcgtggagaagacggggcacagcgggacacttgaccccaaggtcaccgggt 484 Query: 370 acctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggta 429 ||||||||||||| |||| ||||| || ||||| |||||||| |||||| |||| || | Sbjct: 485 gcctcatcgtctgcatcgagcgcgccacgcgcctggtcaagtcacagcagagcgcgggca 544 Query: 430 aggagtatgt 439 | |||||||| Sbjct: 545 aagagtatgt 554
>ref|XM_955734.1| Neurospora crassa OR74A hypothetical protein (NCU01290.1) partial mRNA Length = 1443 Score = 127 bits (64), Expect = 3e-26 Identities = 157/188 (83%) Strand = Plus / Plus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 ||||||||| | |||||||| |||||||||||||||||||| || || || ||||||||| Sbjct: 184 gtcatcaacttggacaagccctccaacccttcctcccacgaagtcgtcgcctggatcaag 243 Query: 309 cgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggc 368 ||| | ||||| ||||||||||| |||||| ||| || ||||| ||||||||||| ||| Sbjct: 244 cgcatgctccgtgttgagaagactggccactccggtactctcgatcccaaggtcactggc 303 Query: 369 aacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggt 428 | | || |||||||||||||| || || | ||||||||| | |||||||| || ||| Sbjct: 304 tgcttgattgtctgcgtcgaccgtgccaccagactcgtcaaggcccagcagggtgctggt 363 Query: 429 aaggagta 436 |||||||| Sbjct: 364 aaggagta 371
>ref|XM_326782.1| Neurospora crassa OR74A hypothetical protein (NCU01290.1) partial mRNA Length = 1443 Score = 127 bits (64), Expect = 3e-26 Identities = 157/188 (83%) Strand = Plus / Plus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 ||||||||| | |||||||| |||||||||||||||||||| || || || ||||||||| Sbjct: 184 gtcatcaacttggacaagccctccaacccttcctcccacgaagtcgtcgcctggatcaag 243 Query: 309 cgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggc 368 ||| | ||||| ||||||||||| |||||| ||| || ||||| ||||||||||| ||| Sbjct: 244 cgcatgctccgtgttgagaagactggccactccggtactctcgatcccaaggtcactggc 303 Query: 369 aacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggt 428 | | || |||||||||||||| || || | ||||||||| | |||||||| || ||| Sbjct: 304 tgcttgattgtctgcgtcgaccgtgccaccagactcgtcaaggcccagcagggtgctggt 363 Query: 429 aaggagta 436 |||||||| Sbjct: 364 aaggagta 371
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 107 bits (54), Expect = 3e-20 Identities = 207/254 (81%), Gaps = 3/254 (1%) Strand = Plus / Minus Query: 161 cctcaacgtccgcaccggccactacaccccgctcccctccggccactcgccgctcaagcg 220 ||||| ||||||||||| |||||||||| || ||| | || ||||||| ||| |||||| Sbjct: 16033 cctcatcgtccgcaccgaccactacacctcgttccacgccagccactccccgttcaagca 15974 Query: 221 acccctcgccgagtaccttcgctatggcgtcatcaacctcgacaa-gccatccaaccctt 279 ||| || | ||| |||| | ||| || |||||||||||| |||| || || | ||| | Sbjct: 15973 gcccatcactgagaacctccactacggtgtcatcaacctcaacaaagctgtctatcccct 15914 Query: 280 cctcccacgaggtggtggcgtggatcaagcgcctcctccgcgttgagaagaccggccaca 339 || |||||||| || || ||||||||||||||||||| || ||||||||| ||||| Sbjct: 15913 tgtcgcacgaggtcgtcgcttggatcaagcgcctcctccttgtcgagaagaccaaccaca 15854 Query: 340 gcggcacgctcga-ccccaaggtcaccggcaacctcatcgtc-tgcgtcgaccgcgcaac 397 |||| || || || |||||||||||| |||||||||||| || || ||||||||||| || Sbjct: 15853 gcgggacccttgacccccaaggtcactggcaacctcatcatcttgtgtcgaccgcgccac 15794 Query: 398 acgcctcgtcaagt 411 ||||||||||||| Sbjct: 15793 tcgcctcgtcaagt 15780
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 107 bits (54), Expect = 3e-20 Identities = 207/254 (81%), Gaps = 3/254 (1%) Strand = Plus / Minus Query: 161 cctcaacgtccgcaccggccactacaccccgctcccctccggccactcgccgctcaagcg 220 ||||| ||||||||||| |||||||||| || ||| | || ||||||| ||| |||||| Sbjct: 16137144 cctcatcgtccgcaccgaccactacacctcgttccacgccagccactccccgttcaagca 16137085 Query: 221 acccctcgccgagtaccttcgctatggcgtcatcaacctcgacaa-gccatccaaccctt 279 ||| || | ||| |||| | ||| || |||||||||||| |||| || || | ||| | Sbjct: 16137084 gcccatcactgagaacctccactacggtgtcatcaacctcaacaaagctgtctatcccct 16137025 Query: 280 cctcccacgaggtggtggcgtggatcaagcgcctcctccgcgttgagaagaccggccaca 339 || |||||||| || || ||||||||||||||||||| || ||||||||| ||||| Sbjct: 16137024 tgtcgcacgaggtcgtcgcttggatcaagcgcctcctccttgtcgagaagaccaaccaca 16136965 Query: 340 gcggcacgctcga-ccccaaggtcaccggcaacctcatcgtc-tgcgtcgaccgcgcaac 397 |||| || || || |||||||||||| |||||||||||| || || ||||||||||| || Sbjct: 16136964 gcgggacccttgacccccaaggtcactggcaacctcatcatcttgtgtcgaccgcgccac 16136905 Query: 398 acgcctcgtcaagt 411 ||||||||||||| Sbjct: 16136904 tcgcctcgtcaagt 16136891
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 107 bits (54), Expect = 3e-20 Identities = 207/254 (81%), Gaps = 3/254 (1%) Strand = Plus / Minus Query: 161 cctcaacgtccgcaccggccactacaccccgctcccctccggccactcgccgctcaagcg 220 ||||| ||||||||||| |||||||||| || ||| | || ||||||| ||| |||||| Sbjct: 16145385 cctcatcgtccgcaccgaccactacacctcgttccacgccagccactccccgttcaagca 16145326 Query: 221 acccctcgccgagtaccttcgctatggcgtcatcaacctcgacaa-gccatccaaccctt 279 ||| || | ||| |||| | ||| || |||||||||||| |||| || || | ||| | Sbjct: 16145325 gcccatcactgagaacctccactacggtgtcatcaacctcaacaaagctgtctatcccct 16145266 Query: 280 cctcccacgaggtggtggcgtggatcaagcgcctcctccgcgttgagaagaccggccaca 339 || |||||||| || || ||||||||||||||||||| || ||||||||| ||||| Sbjct: 16145265 tgtcgcacgaggtcgtcgcttggatcaagcgcctcctccttgtcgagaagaccaaccaca 16145206 Query: 340 gcggcacgctcga-ccccaaggtcaccggcaacctcatcgtc-tgcgtcgaccgcgcaac 397 |||| || || || |||||||||||| |||||||||||| || || ||||||||||| || Sbjct: 16145205 gcgggacccttgacccccaaggtcactggcaacctcatcatcttgtgtcgaccgcgccac 16145146 Query: 398 acgcctcgtcaagt 411 ||||||||||||| Sbjct: 16145145 tcgcctcgtcaagt 16145132
>ref|NM_001031115.1| Gallus gallus dyskeratosis congenita 1, dyskerin (DKC1), mRNA Length = 2844 Score = 87.7 bits (44), Expect = 3e-14 Identities = 158/196 (80%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 304 tggcttcatcaacctggacaagccttccaatccatcttcccatgaggtggtggcgtggat 363 Query: 305 caagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcac 364 | ||| |||| || || |||||||| || ||||| ||||| || ||||| ||||| || Sbjct: 364 ccgacgcatccttcgagtagagaagacggggcacagtggcaccctggaccctaaggtgac 423 Query: 365 cggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgc 424 ||| |||||| || ||| | || | || ||||| ||||||||||| |||||| | || Sbjct: 424 cgggtgcctcattgtgtgcattgagagggcgacacggctcgtcaagtctcagcagagtgc 483 Query: 425 aggtaaggagtatgtg 440 ||| || ||||||||| Sbjct: 484 aggcaaagagtatgtg 499
>emb|AJ720455.1| Gallus gallus mRNA for hypothetical protein, clone 17p9 Length = 2844 Score = 87.7 bits (44), Expect = 3e-14 Identities = 158/196 (80%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 304 tggcttcatcaacctggacaagccttccaatccatcttcccatgaggtggtggcgtggat 363 Query: 305 caagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcac 364 | ||| |||| || || |||||||| || ||||| ||||| || ||||| ||||| || Sbjct: 364 ccgacgcatccttcgagtagagaagacggggcacagtggcaccctggaccctaaggtgac 423 Query: 365 cggcaacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgc 424 ||| |||||| || ||| | || | || ||||| ||||||||||| |||||| | || Sbjct: 424 cgggtgcctcattgtgtgcattgagagggcgacacggctcgtcaagtctcagcagagtgc 483 Query: 425 aggtaaggagtatgtg 440 ||| || ||||||||| Sbjct: 484 aggcaaagagtatgtg 499
>ref|XM_387382.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07206.1) partial mRNA Length = 1461 Score = 79.8 bits (40), Expect = 7e-12 Identities = 154/192 (80%) Strand = Plus / Plus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 ||||| |||||||| ||||| |||||||||||||| |||||||| || || ||| | ||| Sbjct: 211 gtcattaacctcgataagccctccaacccttcctctcacgaggttgtcgcttgggttaag 270 Query: 309 cgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggc 368 ||| | || || ||||||||| || ||| || || ||||| |||||||| ||||| Sbjct: 271 cgcattcttcgatgtgagaagactggtcactctggtactctcgatcccaaggttaccggt 330 Query: 369 aacctcatcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggt 428 | | ||||||||| |||||||||| || || || |||||||| |||||||| || || Sbjct: 331 tgcttgatcgtctgcatcgaccgcgctactcgtcttgtcaagtcccagcagggtgccgga 390 Query: 429 aaggagtatgtg 440 |||||||||||| Sbjct: 391 aaggagtatgtg 402
>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete sequence Length = 179661 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 23588 tggcttcatcaacctggacaagccttccaatccatcttcccatgaggtggtggcgtggat 23647 Query: 305 caagcgcctcctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcac 364 | ||| |||| || || |||||||| || ||||| ||||| || ||||| ||||| || Sbjct: 23648 ccgacgcatccttcgagtagagaagacggggcacagtggcaccctggaccctaaggtgac 23707 Query: 365 cgg 367 ||| Sbjct: 23708 cgg 23710
>ref|XM_751739.1| Ustilago maydis 521 hypothetical protein (UM00685.1) partial mRNA Length = 1491 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 315 ctccgcgttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaacctc 374 |||||||| ||||||||||||||||| || || || || |||||||| || ||| || Sbjct: 283 ctccgcgtcgagaagaccggccacagtggtacccttgatcccaaggttacaggctgtctg 342 Query: 375 atcgtctgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggtaaggag 434 ||||| ||| | ||||| || ||||| || ||||||||||||||||| || ||||||||| Sbjct: 343 atcgtatgcattgaccgtgcgacacgtctggtcaagtcgcagcagggtgctggtaaggag 402 Query: 435 ta 436 || Sbjct: 403 ta 404
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 167/210 (79%) Strand = Plus / Minus Query: 203 ccactcgccgctcaagcgacccctcgccgagtaccttcgctatggcgtcatcaacctcga 262 |||||| |||||||||| ||| |||| || ||||| |||| || ||||| |||||| | Sbjct: 10049402 ccactccccgctcaagcagcccatcgctaagcacctttgctacggtgtcataaacctcaa 10049343 Query: 263 caagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgcctcctccgcgt 322 |||||||||||||| | || |||||||| | | |||| |||| |||||||| | | Sbjct: 10049342 caagccatccaacctcttgtcgcacgaggtcatcacttggaacaagaacctcctccacat 10049283 Query: 323 tgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaacctcatcgtctg 382 |||||||| |||||| ||| || || ||||| ||||||||||| ||||||||||| || Sbjct: 10049282 cgagaagactagccacaacgggacccttgaccctaaggtcaccggtaacctcatcgtatg 10049223 Query: 383 cgtcgaccgcgcaacacgcctcgtcaagtc 412 |||| | || || || |||||||| ||||| Sbjct: 10049222 cgtcaatcgtgctacccgcctcgtgaagtc 10049193 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 161 cctcaacgtccgcaccggccactacaccccgctcccc 197 |||||| |||||||| |||||||||||||| |||||| Sbjct: 10049430 cctcaatgtccgcactggccactacaccccactcccc 10049394
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 75.8 bits (38), Expect = 1e-10 Identities = 167/210 (79%) Strand = Plus / Minus Query: 203 ccactcgccgctcaagcgacccctcgccgagtaccttcgctatggcgtcatcaacctcga 262 |||||| |||||||||| ||| |||| || ||||| |||| || ||||| |||||| | Sbjct: 124095 ccactccccgctcaagcagcccatcgctaagcacctttgctacggtgtcataaacctcaa 124036 Query: 263 caagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgcctcctccgcgt 322 |||||||||||||| | || |||||||| | | |||| |||| |||||||| | | Sbjct: 124035 caagccatccaacctcttgtcgcacgaggtcatcacttggaacaagaacctcctccacat 123976 Query: 323 tgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaacctcatcgtctg 382 |||||||| |||||| ||| || || ||||| ||||||||||| ||||||||||| || Sbjct: 123975 cgagaagactagccacaacgggacccttgaccctaaggtcaccggtaacctcatcgtatg 123916 Query: 383 cgtcgaccgcgcaacacgcctcgtcaagtc 412 |||| | || || || |||||||| ||||| Sbjct: 123915 cgtcaatcgtgctacccgcctcgtgaagtc 123886 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 161 cctcaacgtccgcaccggccactacaccccgctcccc 197 |||||| |||||||| |||||||||||||| |||||| Sbjct: 124123 cctcaatgtccgcactggccactacaccccactcccc 124087
>ref|NM_115574.2| Arabidopsis thaliana NAP57 AT3G57150 (NAP57) mRNA, complete cds Length = 2037 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 139 tccttctcaagaactacgaccgcctcaacgtccgcaccggccactacac 187 |||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 191 tcctcctcaagaactacgaccgcctcaacgtccgtaccggtcactacac 239
>gb|AY050833.2| Arabidopsis thaliana At3g57150 mRNA sequence Length = 1523 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 139 tccttctcaagaactacgaccgcctcaacgtccgcaccggccactacac 187 |||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 191 tcctcctcaagaactacgaccgcctcaacgtccgtaccggtcactacac 239
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3 Length = 91303 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 139 tccttctcaagaactacgaccgcctcaacgtccgcaccggccactacac 187 |||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 83829 tcctcctcaagaactacgaccgcctcaacgtccgtaccggtcactacac 83781
>gb|AY065027.1| Arabidopsis thaliana AT3g57150/F24I3_230 mRNA sequence Length = 1609 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 139 tccttctcaagaactacgaccgcctcaacgtccgcaccggccactacac 187 |||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 188 tcctcctcaagaactacgaccgcctcaacgtccgtaccggtcactacac 236
>emb|BX825012.1|CNS0A7V5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1976 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 139 tccttctcaagaactacgaccgcctcaacgtccgcaccggccactacac 187 |||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 163 tcctcctcaagaactacgaccgcctcaacgtccgtaccggtcactacac 211
>gb|BT003810.1| Arabidopsis thaliana clone C105080 unknown protein (At3g57150) mRNA, complete cds Length = 1729 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 139 tccttctcaagaactacgaccgcctcaacgtccgcaccggccactacac 187 |||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 134 tcctcctcaagaactacgaccgcctcaacgtccgtaccggtcactacac 182
>gb|AF234984.2|AF234984 Arabidopsis thaliana putative pseudouridine synthase (NAP57) mRNA, complete cds Length = 1935 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 139 tccttctcaagaactacgaccgcctcaacgtccgcaccggccactacac 187 |||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 192 tcctcctcaagaactacgaccgcctcaacgtccgtaccggtcactacac 240
>ref|XM_503903.1| Yarrowia lipolytica CLIB122, YALI0E13486g predicted mRNA Length = 1458 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 |||||||||||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 196 gtcatcaacctcgacaagccctccaacccctcttcccatgaggttgttgcctggatcaag 255 Query: 309 cg 310 || Sbjct: 256 cg 257
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 |||||||||||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 1630303 gtcatcaacctcgacaagccctccaacccctcttcccatgaggttgttgcctggatcaag 1630362 Query: 309 cg 310 || Sbjct: 1630363 cg 1630364
>emb|BX294016.1|NCB9K17 Neurospora crassa DNA linkage group V BAC clone B9K17 Length = 71774 Score = 63.9 bits (32), Expect = 4e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 321 gttgagaagaccggccacagcggcacgctcgaccccaaggtcaccggcaacctcatcgtc 380 ||||||||||| |||||| ||| || ||||| ||||||||||| ||| | | || ||| Sbjct: 31240 gttgagaagactggccactccggtactctcgatcccaaggtcactggctgcttgattgtc 31181 Query: 381 tgcgtcgaccgcgcaacacgcctcgtcaagtcgcagcagggcgcaggtaaggagta 436 ||||||||||| || || | ||||||||| | |||||||| || ||||||||||| Sbjct: 31180 tgcgtcgaccgtgccaccagactcgtcaaggcccagcagggtgctggtaaggagta 31125 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 261 gacaagccatccaacccttcctcccacgaggtggtggcgtggatcaagcgc 311 |||||||| |||||||||||||||||||| || || || |||||||||||| Sbjct: 31384 gacaagccctccaacccttcctcccacgaagtcgtcgcctggatcaagcgc 31334
>ref|NM_080381.2| Drosophila melanogaster Nucleolar protein at 60B CG3333-RA, transcript variant A (Nop60B), mRNA Length = 1782 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 491 tggcttcatcaacctggacaagccgtcgaaccccagctcccacgaggtggtggcctggat 550 Query: 305 caag 308 |||| Sbjct: 551 caag 554
>gb|AY089408.1| Drosophila melanogaster AT23018 full insert cDNA Length = 1632 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 489 tggcttcatcaacctggacaagccgtcgaaccccagctcccacgaggtggtggcctggat 548 Query: 305 caag 308 |||| Sbjct: 549 caag 552
>ref|NM_001014547.1| Drosophila melanogaster Nucleolar protein at 60B CG3333-RB, transcript variant B (Nop60B), mRNA Length = 2154 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 491 tggcttcatcaacctggacaagccgtcgaaccccagctcccacgaggtggtggcctggat 550 Query: 305 caag 308 |||| Sbjct: 551 caag 554
>gb|AF097634.1|AF097634 Drosophila melanogaster minifly protein (mfl) gene, complete cds; and snoRNA H1, complete sequence Length = 3490 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 866 tggcttcatcaacctggacaagccgtcgaaccccagctcccacgaggtggtggcctggat 925 Query: 305 caag 308 |||| Sbjct: 926 caag 929
>gb|AC012167.5|AC012167 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone BACR27M17, complete sequence Length = 164443 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 118740 tggcttcatcaacctggacaagccgtcgaaccccagctcccacgaggtggtggcctggat 118799 Query: 305 caag 308 |||| Sbjct: 118800 caag 118803
>gb|AF089837.1|AF089837 Drosophila melanogaster minifly protein (Nop60B) mRNA, complete cds Length = 1997 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 335 tggcttcatcaacctggacaagccgtcgaaccccagctcccacgaggtggtggcctggat 394 Query: 305 caag 308 |||| Sbjct: 395 caag 398
>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete sequence Length = 298827 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 97536 tggcttcatcaacctggacaagccgtcgaaccccagctcccacgaggtggtggcctggat 97595 Query: 305 caag 308 |||| Sbjct: 97596 caag 97599
>gb|AF017230.1|AF017230 Drosophila melanogaster nucleolar protein at band 60B (Nop60B) mRNA, complete cds Length = 1765 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 tggcgtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggat 304 |||| |||||||||| |||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 336 tggcttcatcaacctggacaagccgtcgaaccccagctcccacgaggtggtggcctggat 395 Query: 305 caag 308 |||| Sbjct: 396 caag 399
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 ||||||||||| ||||| ||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 329923 gtcatcaaccttgacaaaccatctaacccttcgtcgcacgaggtcgttgcgtggattaag 329864 Query: 309 cg 310 || Sbjct: 329863 cg 329862 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 408 aagtcgcagcagggcgcaggtaaggagtatgtgtgcat 445 ||||| |||||||| || |||||||||||||| ||||| Sbjct: 329764 aagtctcagcagggtgctggtaaggagtatgtctgcat 329727
>ref|NM_207888.1| Eremothecium gossypii AAL007Cp (AAL007C), mRNA Length = 1458 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 ||||||||||| ||||| ||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 178 gtcatcaaccttgacaaaccatctaacccttcgtcgcacgaggtcgttgcgtggattaag 237 Query: 309 cg 310 || Sbjct: 238 cg 239 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 408 aagtcgcagcagggcgcaggtaaggagtatgtgtgcat 445 ||||| |||||||| || |||||||||||||| ||||| Sbjct: 337 aagtctcagcagggtgctggtaaggagtatgtctgcat 374
>ref|XM_784390.1| PREDICTED: Strongylocentrotus purpuratus similar to H/ACA ribonucleoprotein complex subunit 4 (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (LOC584530), mRNA Length = 1451 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 324 gagaagaccggccacagcggcacgctcgaccccaaggtcac 364 ||||||||||| |||||||| || || |||||||||||||| Sbjct: 348 gagaagaccggtcacagcgggacccttgaccccaaggtcac 388
>ref|XM_781675.1| PREDICTED: Strongylocentrotus purpuratus similar to dyskeratosis congenita 1, dyskerin (LOC581688), partial mRNA Length = 364 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 324 gagaagaccggccacagcggcacgctcgaccccaaggtcac 364 ||||||||||| |||||||| || || |||||||||||||| Sbjct: 262 gagaagaccggtcacagcgggacccttgaccccaaggtcac 302
>gb|AY816009.1| Schistosoma japonicum SJCHGC01561 protein mRNA, complete cds Length = 1447 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 255 aacctcgacaagccatccaacccttcctccca 286 |||||||||||||||| |||||| |||||||| Sbjct: 265 aacctcgacaagccatgcaacccatcctccca 296
>gb|AY812882.1| Schistosoma japonicum clone SJCHGC01562 unknown mRNA Length = 1021 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 255 aacctcgacaagccatccaacccttcctccca 286 |||||||||||||||| |||||| |||||||| Sbjct: 251 aacctcgacaagccatgcaacccatcctccca 282
>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002B02, complete sequence Length = 148881 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 178 gccactacaccccgctcccctcc 200 ||||||||||||||||||||||| Sbjct: 111888 gccactacaccccgctcccctcc 111910
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 246 ggcgtcatcaacctcgacaagcc 268 ||||||||||||||||||||||| Sbjct: 2390323 ggcgtcatcaacctcgacaagcc 2390345
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 44.1 bits (22), Expect = 0.39 Identities = 73/90 (81%) Strand = Plus / Plus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 ||||| |||||||||||||| |||||||| || || ||||| || || || ||| | ||| Sbjct: 797855 gtcattaacctcgacaagccttccaacccgtcttctcacgaagttgttgcttggttgaag 797914 Query: 309 cgcctcctccgcgttgagaagaccggccac 338 || | || || || ||||||||||||||| Sbjct: 797915 cgaattctgcgagtcgagaagaccggccac 797944
>ref|XM_570199.1| Cryptococcus neoformans var. neoformans JEC21 centromere/microtubule binding protein cbf5 (CND02940) partial mRNA Length = 1842 Score = 44.1 bits (22), Expect = 0.39 Identities = 73/90 (81%) Strand = Plus / Plus Query: 249 gtcatcaacctcgacaagccatccaacccttcctcccacgaggtggtggcgtggatcaag 308 ||||| |||||||||||||| |||||||| || || ||||| || || || ||| | ||| Sbjct: 277 gtcattaacctcgacaagccttccaacccgtcttctcacgaagttgttgcttggttgaag 336 Query: 309 cgcctcctccgcgttgagaagaccggccac 338 || | || || || ||||||||||||||| Sbjct: 337 cgaattctgcgagtcgagaagaccggccac 366
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 323 tgagaagaccggccacagcggcacgctcga 352 ||||||| ||||||||| |||||||||||| Sbjct: 2317222 tgagaaggccggccacaccggcacgctcga 2317251
>ref|XM_469490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1128 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gcctcctccgaccccgccgcc 41 ||||||||||||||||||||| Sbjct: 205 gcctcctccgaccccgccgcc 225
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gcctcctccgaccccgccgcc 41 ||||||||||||||||||||| Sbjct: 121552 gcctcctccgaccccgccgcc 121572
>gb|BC047840.1| Danio rerio dyskeratosis congenita 1, dyskerin, mRNA (cDNA clone IMAGE:5413486), partial cds Length = 1532 Score = 42.1 bits (21), Expect = 1.5 Identities = 135/173 (78%) Strand = Plus / Plus Query: 273 aacccttcctcccacgaggtggtggcgtggatcaagcgcctcctccgcgttgagaagacc 332 |||||||||||||| || || ||||| ||||||||| | |||| || || || || || Sbjct: 321 aacccttcctcccatgaagtcgtggcctggatcaagagaatccttcgtgtggaaaaaacg 380 Query: 333 ggccacagcggcacgctcgaccccaaggtcaccggcaacctcatcgtctgcgtcgaccgc 392 || ||||| ||||| || |||||||| ||||| ||| ||| || || | || || || Sbjct: 381 ggtcacagtggcactctagaccccaaagtcacgggctgcctgattgtgtatgtggagcga 440 Query: 393 gcaacacgcctcgtcaagtcgcagcagggcgcaggtaaggagtatgtgtgcat 445 || ||||| || ||||| || |||||| ||||||| || ||||||||| |||| Sbjct: 441 gccacacgactggtcaaatcccagcagagcgcaggcaaagagtatgtgggcat 493
>gb|AE012398.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 306 of 460 of the complete genome Length = 12732 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ccaaggtcaccggcaacctca 375 ||||||||||||||||||||| Sbjct: 4087 ccaaggtcaccggcaacctca 4107
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ccaaggtcaccggcaacctca 375 ||||||||||||||||||||| Sbjct: 1539663 ccaaggtcaccggcaacctca 1539643
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gaggtggtggcgtggatcaag 308 ||||||||||||||||||||| Sbjct: 649649 gaggtggtggcgtggatcaag 649669
>dbj|AK121625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H08, full insert sequence Length = 1450 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gcctcctccgaccccgccgcc 41 ||||||||||||||||||||| Sbjct: 294 gcctcctccgaccccgccgcc 314
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 atggcgtcatcaacctcgaca 264 ||||||||||||||||||||| Sbjct: 561230 atggcgtcatcaacctcgaca 561210
>gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin biosynthesis gene cluster, complete sequence Length = 75439 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 accccaaggtcaccggcaac 371 |||||||||||||||||||| Sbjct: 13119 accccaaggtcaccggcaac 13100
>ref|NM_180506.1| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.1 mRNA, complete cds Length = 1516 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 ggtaaggagtatgtgtgcatcgcc 449 |||||||||||||||| ||||||| Sbjct: 432 ggtaaggagtatgtgttcatcgcc 455
>ref|NM_121737.2| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.2 mRNA, complete cds Length = 1798 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 ggtaaggagtatgtgtgcatcgcc 449 |||||||||||||||| ||||||| Sbjct: 714 ggtaaggagtatgtgttcatcgcc 737
>gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcomycin biosynthetic gene cluster, partial sequence Length = 85915 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 accccaaggtcaccggcaac 371 |||||||||||||||||||| Sbjct: 9046 accccaaggtcaccggcaac 9027
>gb|BT016749.1| Zea mays clone Contig582 mRNA sequence Length = 1068 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gcctcctccgaccccgccgc 40 |||||||||||||||||||| Sbjct: 139 gcctcctccgaccccgccgc 158
>ref|XM_363043.1| Magnaporthe grisea 70-15 hypothetical protein (MG08627.4) partial cds Length = 957 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cgataccacgtcgctggcagacgc 64 |||| ||||||||||||||||||| Sbjct: 318 cgatcccacgtcgctggcagacgc 341
>gb|DQ149101.1| Danio rerio integrin beta1 subunit-like protein 1 (itgb1) mRNA, complete cds Length = 2397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tccctcgacacctccacctg 133 |||||||||||||||||||| Sbjct: 1777 tccctcgacacctccacctg 1796
>gb|AY040042.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1413 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 ggtaaggagtatgtgtgcatcgcc 449 |||||||||||||||| ||||||| Sbjct: 637 ggtaaggagtatgtgttcatcgcc 660
>gb|AF360244.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1628 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 ggtaaggagtatgtgtgcatcgcc 449 |||||||||||||||| ||||||| Sbjct: 714 ggtaaggagtatgtgttcatcgcc 737
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 ccaaggtcaccggcaacctcatcg 378 ||||||||||||||||||| |||| Sbjct: 2415440 ccaaggtcaccggcaacctgatcg 2415417
>gb|AF521878.1| Streptomyces narbonensis desosamine biosynthetic gene cluster, partial sequence Length = 17665 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tcgaccccaaggtcaccggc 368 |||||||||||||||||||| Sbjct: 6139 tcgaccccaaggtcaccggc 6158
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gaccccaaggtcaccggcaa 370 |||||||||||||||||||| Sbjct: 4392298 gaccccaaggtcaccggcaa 4392317
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gccctggttccgtccctcga 121 |||||||||||||||||||| Sbjct: 262540 gccctggttccgtccctcga 262559
>gb|AF361816.1| Arabidopsis thaliana AT5g17310/MKP11_16 mRNA, complete cds Length = 1800 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 ggtaaggagtatgtgtgcatcgcc 449 |||||||||||||||| ||||||| Sbjct: 715 ggtaaggagtatgtgttcatcgcc 738
>emb|BX322549.5| Zebrafish DNA sequence from clone DKEYP-9D12 in linkage group 24, complete sequence Length = 62252 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tccctcgacacctccacctg 133 |||||||||||||||||||| Sbjct: 47150 tccctcgacacctccacctg 47169
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 325 agaagaccggccacagcggcacgctcgacccc 356 ||||| ||||||||| ||| |||||||||||| Sbjct: 735643 agaaggccggccacaccggtacgctcgacccc 735612
>gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D14 map 3p, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gatcaagccccaggccctgg 108 |||||||||||||||||||| Sbjct: 110133 gatcaagccccaggccctgg 110114
>gb|AC018809.5| Homo sapiens chromosome 3 clone RP11-1020A11 map 3p, complete sequence Length = 216911 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gatcaagccccaggccctgg 108 |||||||||||||||||||| Sbjct: 132565 gatcaagccccaggccctgg 132546
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ccctcgacacctccacctggccgc 138 ||||||||||| |||||||||||| Sbjct: 37559 ccctcgacaccaccacctggccgc 37582
>dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKP11 Length = 75188 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 426 ggtaaggagtatgtgtgcatcgcc 449 |||||||||||||||| ||||||| Sbjct: 57779 ggtaaggagtatgtgttcatcgcc 57756
>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence Length = 35159 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctcctccgaccccgccgccg 42 |||||||||||||||||||| Sbjct: 21936 ctcctccgaccccgccgccg 21917
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gaccccaaggtcaccggcaa 370 |||||||||||||||||||| Sbjct: 4393180 gaccccaaggtcaccggcaa 4393199
>gb|AF079762.1|AF079762 Streptomyces venezuelae desosamine biosynthetic gene cluster, complete sequence Length = 12441 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tcgaccccaaggtcaccggc 368 |||||||||||||||||||| Sbjct: 4826 tcgaccccaaggtcaccggc 4845
>gb|AF035590.1|PMHOXQ1 Petromyzon marinus homeobox protein HoxQ8 (HoxQ8) gene, exon 1 Length = 512 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cctcctccgaccccgccgcc 41 |||||||||||||||||||| Sbjct: 203 cctcctccgaccccgccgcc 184
>ref|NM_001034971.1| Danio rerio integrin beta1 subunit-like protein 1 (itgb1), mRNA Length = 2397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tccctcgacacctccacctg 133 |||||||||||||||||||| Sbjct: 1777 tccctcgacacctccacctg 1796
>gb|AC027124.5| Homo sapiens chromosome 3 clone RP11-449E21 map 3p, complete sequence Length = 208989 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gatcaagccccaggccctgg 108 |||||||||||||||||||| Sbjct: 80167 gatcaagccccaggccctgg 80148 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,512,249 Number of Sequences: 3902068 Number of extensions: 2512249 Number of successful extensions: 54000 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53038 Number of HSP's gapped (non-prelim): 954 length of query: 454 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 432 effective length of database: 17,147,199,772 effective search space: 7407590301504 effective search space used: 7407590301504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
