ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480938.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.34
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
3dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
4dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
5ref|XM_607440.2| PREDICTED: Bos taurus similar to CG9339-PF, iso... 42 1.4
6gb|BC114148.1| Bos taurus similar to CG9339-PF, isoform F, mRNA ... 42 1.4
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
9emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.4
10ref|XM_465314.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
11ref|NM_190512.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
12ref|XM_470714.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
13gb|AY422505.1| Ulva lobata isolate Ufen99-37 internal transcribe... 40 5.3
14gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genom... 40 5.3
15gb|AY260563.1| Ulva lobata internal transcribed spacer 1, partia... 40 5.3
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.3
17gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, comp... 40 5.3
18gb|AE011928.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.3
19gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genom... 40 5.3
20gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 5.3
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
25gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.3
26dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
27dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.3
28dbj|AP004132.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
29dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
30dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
31dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
32dbj|AK109580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
33emb|AJ333721.1|HSA333721 Homo sapiens genomic sequence surroundi... 40 5.3
34dbj|AK073295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
35dbj|AK070698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
36dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
37emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.3
38dbj|AK060955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
39dbj|AK060473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
40gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, co... 40 5.3
41gb|AF122049.1|AF122049 Hordeum vulgare tissue-type aleurone limi... 40 5.3
42gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.3
43emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
44emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.3 
>ref|XM_480938.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 606

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 128 ggcgaggccggcgacgcggccg 149
           ||||||||||||||||||||||
Sbjct: 478 ggcgaggccggcgacgcggccg 499
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 128     ggcgaggccggcgacgcggccg 149
               ||||||||||||||||||||||
Sbjct: 8776014 ggcgaggccggcgacgcggccg 8776035
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>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0437G01
          Length = 147101

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   ggcgaggccggcgacgcggccg 149
             ||||||||||||||||||||||
Sbjct: 53763 ggcgaggccggcgacgcggccg 53784
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>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0070J06
          Length = 142303

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    ggcgaggccggcgacgcggccg 149
              ||||||||||||||||||||||
Sbjct: 118993 ggcgaggccggcgacgcggccg 119014
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>ref|XM_607440.2| PREDICTED: Bos taurus similar to CG9339-PF, isoform F (LOC529002),
           mRNA
          Length = 3940

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 41  gacgtcctccgacacggccac 61
           |||||||||||||||||||||
Sbjct: 615 gacgtcctccgacacggccac 595
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>gb|BC114148.1| Bos taurus similar to CG9339-PF, isoform F, mRNA (cDNA clone
           MGC:137396 IMAGE:8165746), complete cds
          Length = 2545

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 41  gacgtcctccgacacggccac 61
           |||||||||||||||||||||
Sbjct: 872 gacgtcctccgacacggccac 852
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 124      ggctggcgaggccggcgacgc 144
                |||||||||||||||||||||
Sbjct: 20910233 ggctggcgaggccggcgacgc 20910253



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       ggggacgacgtcggctccgg 93
                ||||||||||||||||||||
Sbjct: 15009177 ggggacgacgtcggctccgg 15009196



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       ggggacgacgtcggctccgg 93
                ||||||||||||||||||||
Sbjct: 11899956 ggggacgacgtcggctccgg 11899975
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 124      ggctggcgaggccggcgacgc 144
                |||||||||||||||||||||
Sbjct: 20836447 ggctggcgaggccggcgacgc 20836467



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       ggggacgacgtcggctccgg 93
                ||||||||||||||||||||
Sbjct: 14963460 ggggacgacgtcggctccgg 14963479



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       ggggacgacgtcggctccgg 93
                ||||||||||||||||||||
Sbjct: 11899627 ggggacgacgtcggctccgg 11899646
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   ggctggcgaggccggcgacgc 144
             |||||||||||||||||||||
Sbjct: 48762 ggctggcgaggccggcgacgc 48742
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>ref|XM_465314.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1467

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ggggacgacgtcggctccgg 93
           ||||||||||||||||||||
Sbjct: 295 ggggacgacgtcggctccgg 276
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>ref|NM_190512.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 393

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 74  ggggacgacgtcggctccgg 93
           ||||||||||||||||||||
Sbjct: 158 ggggacgacgtcggctccgg 177
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>ref|XM_470714.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 38  ctcgacgtcctccgacacggccac 61
           |||||| |||||||||||||||||
Sbjct: 195 ctcgacctcctccgacacggccac 172
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>gb|AY422505.1| Ulva lobata isolate Ufen99-37 internal transcribed spacer 1,
           partial sequence; and 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence
          Length = 523

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  cgtcggctccggacaccccc 101
           ||||||||||||||||||||
Sbjct: 78  cgtcggctccggacaccccc 97
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>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete
             sequence
          Length = 150743

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aagcgcggcggcgcggaccg 207
             ||||||||||||||||||||
Sbjct: 61461 aagcgcggcggcgcggaccg 61442
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>gb|AY260563.1| Ulva lobata internal transcribed spacer 1, partial sequence; 5.8S
           ribosomal RNA gene, complete sequence; and internal
           transcribed spacer 2, partial sequence
          Length = 540

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  cgtcggctccggacaccccc 101
           ||||||||||||||||||||
Sbjct: 95  cgtcggctccggacaccccc 114
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      aagcgcggcggcgcggaccg 207
                ||||||||||||||||||||
Sbjct: 31619206 aagcgcggcggcgcggaccg 31619225



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 38       ctcgacgtcctccgacacggccac 61
                |||||| |||||||||||||||||
Sbjct: 14706657 ctcgacctcctccgacacggccac 14706680
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>gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, complete sequence
          Length = 178898

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ggccggtgccccggccgtcc 353
             ||||||||||||||||||||
Sbjct: 44333 ggccggtgccccggccgtcc 44352
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>gb|AE011928.1| Xanthomonas axonopodis pv. citri str. 306,  section 306 of 469 of the
             complete genome
          Length = 10541

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aagcgcggcggcgcggaccg 207
             ||||||||||||||||||||
Sbjct: 10314 aagcgcggcggcgcggaccg 10333
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>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete
             sequence
          Length = 130306

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    ctcgacgtcctccgacacggccac 61
             |||||| |||||||||||||||||
Sbjct: 45569 ctcgacctcctccgacacggccac 45592
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     cgatgcggctggcgaggccg 137
               ||||||||||||||||||||
Sbjct: 3137774 cgatgcggctggcgaggccg 3137755
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 74       ggggacgacgtcggctccgg 93
                ||||||||||||||||||||
Sbjct: 19159908 ggggacgacgtcggctccgg 19159889
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      aagcgcggcggcgcggaccg 207
                ||||||||||||||||||||
Sbjct: 31709722 aagcgcggcggcgcggaccg 31709741



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 38       ctcgacgtcctccgacacggccac 61
                |||||| |||||||||||||||||
Sbjct: 14701191 ctcgacctcctccgacacggccac 14701214
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 74       ggggacgacgtcggctccgg 93
                ||||||||||||||||||||
Sbjct: 16930830 ggggacgacgtcggctccgg 16930811



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       ggggacgacgtcggctccgg 93
                ||||||||||||||||||||
Sbjct: 13363030 ggggacgacgtcggctccgg 13363049
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       ggggacgacgtcggctccgg 93
                ||||||||||||||||||||
Sbjct: 35957723 ggggacgacgtcggctccgg 35957742
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     cgcggtggcgcgggcggagg 324
               ||||||||||||||||||||
Sbjct: 4305713 cgcggtggcgcgggcggagg 4305732
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>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D11
          Length = 138108

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    ggggacgacgtcggctccgg 93
             ||||||||||||||||||||
Sbjct: 56401 ggggacgacgtcggctccgg 56420
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     ccggcgacgcggccggagga 154
               ||||||||||||||||||||
Sbjct: 5177159 ccggcgacgcggccggagga 5177178



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 302     aagcgcggtggcgcgggcgg 321
               ||||||||||||||||||||
Sbjct: 1095712 aagcgcggtggcgcgggcgg 1095693
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>dbj|AP004132.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1089_A02
          Length = 117908

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    ggggacgacgtcggctccgg 93
             ||||||||||||||||||||
Sbjct: 72935 ggggacgacgtcggctccgg 72916
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>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0036H07
          Length = 149797

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     ggggacgacgtcggctccgg 93
              ||||||||||||||||||||
Sbjct: 131887 ggggacgacgtcggctccgg 131868
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>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1521_G01
          Length = 144102

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    ggggacgacgtcggctccgg 93
             ||||||||||||||||||||
Sbjct: 88281 ggggacgacgtcggctccgg 88300
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>dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G07, full
           insert sequence
          Length = 1112

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 38  ctcgacgtcctccgacacggccac 61
           |||||| |||||||||||||||||
Sbjct: 278 ctcgacctcctccgacacggccac 255
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>dbj|AK109580.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-A04, full
           insert sequence
          Length = 1503

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ggggacgacgtcggctccgg 93
           ||||||||||||||||||||
Sbjct: 647 ggggacgacgtcggctccgg 628
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>emb|AJ333721.1|HSA333721 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-BJ24RS
          Length = 683

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 accgaggacccaaccaagcc 223
           ||||||||||||||||||||
Sbjct: 524 accgaggacccaaccaagcc 505
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>dbj|AK073295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024G10, full
           insert sequence
          Length = 1467

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ggggacgacgtcggctccgg 93
           ||||||||||||||||||||
Sbjct: 295 ggggacgacgtcggctccgg 276
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>dbj|AK070698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056L04, full
           insert sequence
          Length = 1837

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ggggacgacgtcggctccgg 93
           ||||||||||||||||||||
Sbjct: 285 ggggacgacgtcggctccgg 266
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>dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169L09, full
           insert sequence
          Length = 1172

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 38  ctcgacgtcctccgacacggccac 61
           |||||| |||||||||||||||||
Sbjct: 286 ctcgacctcctccgacacggccac 263
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 127     tggcgaggccggcgacgcggccgg 150
               ||||||||||| ||||||||||||
Sbjct: 2589605 tggcgaggccgtcgacgcggccgg 2589628
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>dbj|AK060955.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G09, full
           insert sequence
          Length = 917

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ggggacgacgtcggctccgg 93
           ||||||||||||||||||||
Sbjct: 185 ggggacgacgtcggctccgg 166
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>dbj|AK060473.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E10, full
           insert sequence
          Length = 1182

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ggggacgacgtcggctccgg 93
           ||||||||||||||||||||
Sbjct: 161 ggggacgacgtcggctccgg 142
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>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds
          Length = 11462

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 303  agcgcggtggcgcgggcgga 322
            ||||||||||||||||||||
Sbjct: 1868 agcgcggtggcgcgggcgga 1849
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>gb|AF122049.1|AF122049 Hordeum vulgare tissue-type aleurone limit dextrinase mRNA,
           complete cds
          Length = 3429

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 agcgcggtggcgcgggcgga 322
           ||||||||||||||||||||
Sbjct: 156 agcgcggtggcgcgggcgga 137
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 189     agcgcggcggcgcggaccga 208
               ||||||||||||||||||||
Sbjct: 2849560 agcgcggcggcgcggaccga 2849579
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    ggggacgacgtcggctccgg 93
             ||||||||||||||||||||
Sbjct: 93429 ggggacgacgtcggctccgg 93410
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>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 174521

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    ggggacgacgtcggctccgg 93
             ||||||||||||||||||||
Sbjct: 72670 ggggacgacgtcggctccgg 72651


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,872,725
Number of Sequences: 3902068
Number of extensions: 2872725
Number of successful extensions: 53392
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51640
Number of HSP's gapped (non-prelim): 1752
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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