| Clone Name | bast50e01 |
|---|---|
| Clone Library Name | barley_pub |
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 79.3 bits (194), Expect = 2e-15 Identities = 32/42 (76%), Positives = 38/42 (90%) Frame = +3 Query: 192 RCPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCE 317 RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RC+ Sbjct: 26 RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCD 67
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCE 317 C D+QALL++K+ LGNP TL +W P + DCC TW + C+ Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCD 73
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCE 317 C D+QALL++K+ LGNP TL +W P + DCC TW + C+ Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCD 73
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCE 317 C D+QALL++K+ LGNP TL +W P + DCC TW + C+ Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCD 73
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 44.7 bits (104), Expect = 6e-05 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRC 314 C Q D+ LL++K++L NP L +W P DCC+W L C Sbjct: 25 CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLEC 63
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 42.7 bits (99), Expect = 2e-04 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRC 314 C + D+ LL++K++L NP L +W P DCC+W L C Sbjct: 25 CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLEC 63
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 39.3 bits (90), Expect = 0.003 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCE 317 C D++ LL++K+A G+P L +W + DCC W + C+ Sbjct: 27 CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCD 66
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +3 Query: 204 ADRQALLRVKQALGNP-ATLKTWSPASADCCTWDHLRC 314 A+ AL +K +L +P L++W CTW H+ C Sbjct: 27 AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTC 64
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +3 Query: 204 ADRQALLRVKQALGNPATLKTWS-PASADCCTWDHLRC 314 ++ +L+ K++L NP+ L +W+ +SA C W + C Sbjct: 25 SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,890,451 Number of Sequences: 219361 Number of extensions: 193901 Number of successful extensions: 756 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 754 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)