ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50e10 |
|---|---|
| Clone Library Name | barley_pub |
>RSBQ_BACSU (O07015) Sigma factor sigB regulation protein rsbQ| Length = 269 Score = 74.7 bits (182), Expect = 9e-14 Identities = 34/74 (45%), Positives = 44/74 (59%) Frame = +2 Query: 212 GFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSILDAL 391 GFG DQS W+ V P DHRV+L+D V +G + +D RY LD Y D+L + +AL Sbjct: 26 GFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEAL 85 Query: 392 RIPRCAFVGHSVSA 433 + FVGHSV A Sbjct: 86 DLKETVFVGHSVGA 99
>TODF_PSEPU (P23133) 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase (EC 3.1.1.-)| (HOHH) Length = 276 Score = 40.8 bits (94), Expect = 0.001 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = +2 Query: 203 LSHGFGTDQSAWSR---VLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLL 373 L HG G +AW+ V+P L+R RV+ D+V G H + ++++V L Sbjct: 32 LVHGSGPGVTAWANWRTVMPELSRHRRVIAPDMVGFGFTQRPH---GIHYGVESWVAHLA 88 Query: 374 SILDALRIPRCAFVGHS 424 ILDAL + R VG+S Sbjct: 89 GILDALELDRVDLVGNS 105
>DMPD_PSEUF (P19076) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)| (HMSH) Length = 283 Score = 40.0 bits (92), Expect = 0.002 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Frame = +2 Query: 209 HGFGTDQSAWSR---VLPYLTRDHRVVLYDLVCAG-SVNPDHFDFRRYNNLDAYVDDLLS 376 HG G +AW+ V+P L + RV+ D++ G S P + R D +VD + Sbjct: 36 HGSGPGVTAWANWRLVMPELAKSRRVIAPDMLGFGYSERPADAQYNR----DVWVDHAVG 91 Query: 377 ILDALRIPRCAFVGHS 424 +LDAL I + VG+S Sbjct: 92 VLDALEIEQADLVGNS 107
>ELH1_ACIAD (Q59093) 3-oxoadipate enol-lactonase 1 (EC 3.1.1.24) (3-oxoadipate| enol-lactonase I) (Enol-lactone hydrolase I) (Beta-ketoadipate enol-lactone hydrolase I) Length = 266 Score = 37.7 bits (86), Expect = 0.012 Identities = 26/74 (35%), Positives = 34/74 (45%) Frame = +2 Query: 206 SHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSILD 385 S+ GTD W + L +RVV YD G D + NL +D+L ILD Sbjct: 33 SNSLGTDHGMWQPQVAALKSQYRVVTYD--TRGHGQSDVIENTTLQNLG---EDVLDILD 87 Query: 386 ALRIPRCAFVGHSV 427 AL I + F G S+ Sbjct: 88 ALNIEKAHFCGISM 101
>Y2734_MYCBO (P0A573) Hypothetical protein Mb2734| Length = 341 Score = 37.4 bits (85), Expect = 0.016 Identities = 22/75 (29%), Positives = 36/75 (48%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSIL 382 L HG G + + W+ V L + V+ DL+ G + D+ ++ AY + + +L Sbjct: 42 LIHGIGDNSTTWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADY----SVAAYANGMRDLL 97 Query: 383 DALRIPRCAFVGHSV 427 L I R VGHS+ Sbjct: 98 SVLDIERVTIVGHSL 112
>Y2715_MYCTU (P0A572) Hypothetical protein Rv2715/MT2788| Length = 341 Score = 37.4 bits (85), Expect = 0.016 Identities = 22/75 (29%), Positives = 36/75 (48%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSIL 382 L HG G + + W+ V L + V+ DL+ G + D+ ++ AY + + +L Sbjct: 42 LIHGIGDNSTTWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADY----SVAAYANGMRDLL 97 Query: 383 DALRIPRCAFVGHSV 427 L I R VGHS+ Sbjct: 98 SVLDIERVTIVGHSL 112
>ACOC_PSEPU (Q59695) Dihydrolipoyllysine-residue acetyltransferase component of| acetoin cleaving system (EC 2.3.1.12) (Acetoin dehydrogenase E2 component) (Dihydrolipoamide acetyltransferase component of acetoin cleaving system) Length = 370 Score = 37.4 bits (85), Expect = 0.016 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRR---YNNLDAYVDDLL 373 L HGFG D + W P L + RV+ DL P H + + +LD + +L Sbjct: 138 LVHGFGGDLNNWLFNHPALAAERRVIALDL-------PGHGESAKALQRGDLDELSETVL 190 Query: 374 SILDALRIPRCAFVGHSV 427 ++LD L I + GHS+ Sbjct: 191 ALLDHLDIAKAHLAGHSM 208
>DEH1_MORSB (Q01398) Haloacetate dehalogenase H-1 (EC 3.8.1.3)| Length = 294 Score = 37.4 bits (85), Expect = 0.016 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = +2 Query: 209 HGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAG-SVNPDHFDFRRYNNLDAYVDDLLSILD 385 HGF +++ W+RV P L H VV DL G S P R + + D L ++ Sbjct: 33 HGFPQNRAMWARVAPQLAEHHTVVCADLRGYGDSDKPKCLPDRSNYSFRTFAHDQLCVMR 92 Query: 386 ALRIPRCAFVGH 421 L R VGH Sbjct: 93 HLGFERFHLVGH 104
>ELH2_ACIAD (P00632) 3-oxoadipate enol-lactonase 2 (EC 3.1.1.24) (3-oxoadipate| enol-lactonase II) (Enol-lactone hydrolase II) (Beta-ketoadipate enol-lactone hydrolase II) Length = 266 Score = 36.6 bits (83), Expect = 0.027 Identities = 21/74 (28%), Positives = 38/74 (51%) Frame = +2 Query: 206 SHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSILD 385 S+ GT+ S W + + Y + V+ YD G+ + +R +D D++++LD Sbjct: 32 SNSLGTNLSMWQQQIAYFQDKYFVICYDTRGHGASSTPVGPYR----IDQLGTDVIALLD 87 Query: 386 ALRIPRCAFVGHSV 427 L+IP+ F G S+ Sbjct: 88 HLQIPQATFCGISM 101
>BIOH_LEGPH (Q5ZVG6) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis| protein bioH) Length = 239 Score = 34.7 bits (78), Expect = 0.10 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVD 364 L HG+G D W ++PYL ++++L DL G ++ + N LD D Sbjct: 16 LFHGWGFDSQIWQPIIPYLKPKYQIILVDLPGFGLTPMMDWESFKKNLLDQLPD 69
>BIOH_LEGPA (Q5X590) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis| protein bioH) Length = 239 Score = 34.7 bits (78), Expect = 0.10 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVD 364 L HG+G D W ++PYL ++++L DL G ++ + N LD D Sbjct: 16 LFHGWGFDNQIWQPIIPYLKPKYQIILVDLPGFGLTPMMDWESFKKNLLDQLPD 69
>BIOH_LEGPL (Q5WW99) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis| protein bioH) Length = 239 Score = 33.9 bits (76), Expect = 0.18 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDL 292 L HG+G D W ++PYL ++++L DL Sbjct: 16 LFHGWGFDSQIWQPIIPYLKPKYQIILVDL 45
>ABHD5_RAT (Q6QA69) Abhydrolase domain-containing protein 5 (Lipid| droplet-binding protein CGI-58) Length = 351 Score = 33.5 bits (75), Expect = 0.23 Identities = 20/75 (26%), Positives = 34/75 (45%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSIL 382 L HGFG W+ L+ D V +DL+ G + FD + +V+ + Sbjct: 82 LLHGFGGGLGLWALNFEDLSTDRPVYAFDLLGFGRSSRPRFDSDAEEVENQFVESIEEWR 141 Query: 383 DALRIPRCAFVGHSV 427 ALR+ + +GH++ Sbjct: 142 CALRLDKMILLGHNL 156
>ABHD5_MOUSE (Q9DBL9) Abhydrolase domain-containing protein 5 (Lipid| droplet-binding protein CGI-58) Length = 351 Score = 33.5 bits (75), Expect = 0.23 Identities = 20/75 (26%), Positives = 34/75 (45%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSIL 382 L HGFG W+ L+ D V +DL+ G + FD + +V+ + Sbjct: 82 LLHGFGGGLGLWALNFEDLSTDRPVYAFDLLGFGRSSRPRFDSDAEEVENQFVESIEEWR 141 Query: 383 DALRIPRCAFVGHSV 427 ALR+ + +GH++ Sbjct: 142 CALRLDKMILLGHNL 156
>DHAA_RHOSO (P0A3G3) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 293 Score = 33.1 bits (74), Expect = 0.30 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 209 HGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAG-SVNPDHFDFRRYNNLDAYVDDLLSILD 385 HG T W ++P++ HR + DL+ G S PD LD + DD + LD Sbjct: 39 HGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD---------LDYFFDDHVRYLD 89 Query: 386 A 388 A Sbjct: 90 A 90
>DHAA_RHORH (P0A3G2) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 293 Score = 33.1 bits (74), Expect = 0.30 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 209 HGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAG-SVNPDHFDFRRYNNLDAYVDDLLSILD 385 HG T W ++P++ HR + DL+ G S PD LD + DD + LD Sbjct: 39 HGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD---------LDYFFDDHVRYLD 89 Query: 386 A 388 A Sbjct: 90 A 90
>DHAA_PSEPV (P0A3G4) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 293 Score = 33.1 bits (74), Expect = 0.30 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 209 HGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAG-SVNPDHFDFRRYNNLDAYVDDLLSILD 385 HG T W ++P++ HR + DL+ G S PD LD + DD + LD Sbjct: 39 HGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD---------LDYFFDDHVRYLD 89 Query: 386 A 388 A Sbjct: 90 A 90
>DHAA_RHOSD (P59336) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 294 Score = 33.1 bits (74), Expect = 0.30 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 209 HGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAG-SVNPDHFDFRRYNNLDAYVDDLLSILD 385 HG T W ++P++ HR + DL+ G S PD LD + DD + LD Sbjct: 39 HGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD---------LDYFFDDHVRYLD 89 Query: 386 A 388 A Sbjct: 90 A 90
>DHAA_MYCSX (Q9ZER0) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 307 Score = 33.1 bits (74), Expect = 0.30 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 209 HGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAG-SVNPDHFDFRRYNNLDAYVDDLLSILD 385 HG T W ++P++ HR + DL+ G S PD LD + DD + LD Sbjct: 39 HGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD---------LDYFFDDHVRYLD 89 Query: 386 A 388 A Sbjct: 90 A 90
>BCHO_RHOCA (P26174) Magnesium-chelatase 30 kDa subunit (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase) Length = 284 Score = 32.7 bits (73), Expect = 0.39 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLV---CAGSVNPDHFDFRRYNNLDAYVDDLL 373 L HG G ++ +++P L+ +RV++ DL C+ S + F L +DL Sbjct: 41 LLHGLGASGHSFRKMIPGLSARYRVIVPDLPGHGCSRSTARNRF------GLKPMAEDLW 94 Query: 374 SILDALRIPRCAFVGHS 424 + L + A +GHS Sbjct: 95 KLCQHLNVTPAAVIGHS 111
>DHAA_RHILO (Q98C03) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 309 Score = 32.3 bits (72), Expect = 0.51 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Frame = +2 Query: 209 HGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNN---LDAYVDDLLSI 379 HG T W ++P++ R + DL+ G D+R +++ LDA++ D L I Sbjct: 43 HGNPTSSHIWRNIIPHVAPFGRCIAPDLIGYGQSGKPDIDYRFFDHVRYLDAFL-DALDI 101 Query: 380 LDALRI 397 D L + Sbjct: 102 RDVLLV 107
>TPES_PSEPU (P07383) Tropinesterase (EC 3.1.1.10) (Atropinesterase) (Atropine| acylhydrolase) Length = 272 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/77 (22%), Positives = 36/77 (46%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSIL 382 L HG+ A+S + P+L++D R + DL G + + + + +D+ + Sbjct: 41 LLHGYTDTSRAFSSLAPFLSKDKRYLALDLRGHGGTSIPKCCY----YVSDFAEDVSDFI 96 Query: 383 DALRIPRCAFVGHSVSA 433 D + + +GHS+ + Sbjct: 97 DKMGLHNTTVIGHSMGS 113
>YBFF_ECOLI (P75736) Esterase ybfF (EC 3.1.-.-)| Length = 254 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +2 Query: 257 LTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSILDALRIPRCAFVGHSV 427 L DH ++ D+ G D N A DL+ LDA +I + F+GHS+ Sbjct: 39 LVNDHNIIQVDMRNHGLSPRDPV-----MNYPAMAQDLVDTLDAQQIDKATFIGHSM 90
>HYES_MOUSE (P34914) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 554 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTR-DHRVVLYDLVCAG--SVNPDHFDFRRYNNLDAYVDDLL 373 L HGF +W +P L + RV+ D+ G S P+ ++ ++ +++ Sbjct: 261 LCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYA----MELLCKEMV 316 Query: 374 SILDALRIPRCAFVGH 421 + LD L IP+ F+GH Sbjct: 317 TFLDKLGIPQAVFIGH 332
>MURD_FRATT (Q5NHK3) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 416 Score = 29.6 bits (65), Expect = 3.3 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 278 VLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSI 379 V +DL C +V+PDH D RY N + Y L++ Sbjct: 162 VRFDLGCIINVSPDHLD--RYQNFEQYKQSKLNL 193
>HYES_RAT (P80299) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 554 Score = 29.6 bits (65), Expect = 3.3 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTR-DHRVVLYDLVCAG--SVNPDHFDFRRYNNLDAYVDDLL 373 L HGF +W +P L + RV+ D+ G S P+ ++ ++ ++++ Sbjct: 261 LCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYA----MELLCEEMV 316 Query: 374 SILDALRIPRCAFVGH 421 + L+ L IP+ F+GH Sbjct: 317 TFLNKLGIPQAVFIGH 332
>RUTD_ECO57 (Q8XAU7) Protein rutD (Pyrimidine utilization protein D)| Length = 266 Score = 28.9 bits (63), Expect = 5.7 Identities = 24/77 (31%), Positives = 34/77 (44%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSIL 382 L G G S W L L ++++VV YD G+ NPD ++ +L L Sbjct: 18 LISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGN-NPD--TLAEDYSITQMAAELHQAL 74 Query: 383 DALRIPRCAFVGHSVSA 433 A I A VGH++ A Sbjct: 75 VAAGIEHYAVVGHALGA 91
>BIOH_PHOPR (Q6LVQ7) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis| protein bioH) Length = 254 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDL 292 L HG+G + + W ++LP LT +RV D+ Sbjct: 18 LIHGWGMNGAVWQQLLPLLTPFYRVHWVDM 47
>RUTD_ECOLI (P75895) Protein rutD (Pyrimidine utilization protein D)| Length = 266 Score = 28.5 bits (62), Expect = 7.4 Identities = 24/77 (31%), Positives = 34/77 (44%) Frame = +2 Query: 203 LSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSIL 382 L G G S W L L ++++VV YD G+ NPD ++ +L L Sbjct: 18 LISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGN-NPD--TLAEDYSIAQMAAELHQAL 74 Query: 383 DALRIPRCAFVGHSVSA 433 A I A VGH++ A Sbjct: 75 VAAGIEHYAVVGHALGA 91
>PRXC_PSEFL (O31158) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride| peroxidase) (CPO-F) (Chloroperoxidase F) Length = 273 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +2 Query: 206 SHGFGTDQSAWSRVLPYLT-RDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSIL 382 SHG+ + +W + +L + +RV+ +D G + N++D Y DDL ++ Sbjct: 25 SHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSG----NDMDTYADDLAQLI 80 Query: 383 DALRIPRCAFVGHS 424 + L + G S Sbjct: 81 EHLDLRDAVLFGFS 94
>YVAM_BACSU (O32234) Protein yvaM| Length = 256 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +2 Query: 257 LTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSILDALRIPRCAFVGHS 424 L++ RV+ DL +G + DH D + ++ Y +++ +DAL I + G+S Sbjct: 42 LSKHFRVIFPDL--SGHGDSDHID--QPASISYYANEIAQFMDALHIDKAVLFGYS 93
>PRXC_STRLI (P49323) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride| peroxidase) (CPO-L) (Chloroperoxidase L) Length = 275 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = +2 Query: 209 HGFGTDQSAW-SRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYNNLDAYVDDLLSILD 385 HG+ W +++L +L+ +RV+ +D G + +++D Y D+ ++ + Sbjct: 28 HGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTG----HDMDTYAADVAALTE 83 Query: 386 ALRIPRCAFVGHS 424 AL + +GHS Sbjct: 84 ALDLRGAVHIGHS 96
>RPO1_VACCV (P07392) DNA-directed RNA polymerase 147 kDa polypeptide (EC 2.7.7.6)| Length = 1287 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 284 YDLVCAGSVNPDHFDFRRYNNLDAYVDDLL 373 ++ VC G +NPDH F + D YV D++ Sbjct: 995 FEFVCLGELNPDHSLFEK--KQDRYVVDII 1022
>RGA3_SCHPO (O14014) Probable Rho-type GTPase-activating protein 3| Length = 969 Score = 28.1 bits (61), Expect = 9.7 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -3 Query: 153 SSFAPLGAPPTIVSPEPDAG 94 SSFA L +PP ++SP+P+ G Sbjct: 388 SSFAQLLSPPQVLSPKPNGG 407 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.302 0.113 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,015,967 Number of Sequences: 219361 Number of extensions: 387513 Number of successful extensions: 516 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 513 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 513 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits)
