ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast50e11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 547 bits (276), Expect = e-153 Identities = 283/284 (99%), Gaps = 1/284 (0%) Strand = Plus / Plus Query: 67 ctagcgagctaggcttggaggtgagcgaaaatgccggtcagcaggatcgccgtggggagc 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 ctagcgagctaggcttggaggtgagcgaaaatgccggtcagcaggatcgccgtggggagc 93 Query: 127 caccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgccgagttcatctccacg 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 caccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgccgagttcatctccacg 153 Query: 187 ctcatcttcgtcttcgccggccagggctccggcatggccttcagcaagctgagccccgac 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 ctcatcttcgtcttcgccggccagggctccggcatggccttcagcaagctgagccccgac 213 Query: 247 ggcgtggcgacgccggccgggctgatctcggcggcgatagcgcacgcgttcgcgctgttc 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 ggcgtggcgacgccggccgggctgatctcggcggcgatagcgcacgcgttcgcgctgttc 273 Query: 307 gtggcggtgtcggtgggcgcc-acatctcgggcgggcacgtgaa 349 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 274 gtggcggtgtcggtgggcgccaacatctcgggcgggcacgtgaa 317
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 448 bits (226), Expect = e-123 Identities = 269/282 (95%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 69 agcgagctaggcttggaggtgagcgaaaatgccggtcagcaggatcgccgtggggagcca 128 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 agcgagctaggctcggaggtgagcgaaaatgccggtcagcaggatcgccgtggggagcca 126 Query: 129 ccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgccgagttcatctccacgct 188 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ccgtgaggtgtacgaggtgggcgccctcaaggcggcgctcgccgagttcatctccacgct 186 Query: 189 catcttcgtcttcgccggccagggctccggcatggccttcagcaagctgagccccgacgg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 catcttcgtcttcgccggccagggctccggcatggccttcagcaagctgagccccgacgg 246 Query: 249 cgtggcgacgccggccgggctgatctcggcggcgatagcgcacgcgttcgcgctgttcgt 308 || |||||| || ||||| || ||||||||||||||||| ||||| |||||||||||||| Sbjct: 247 cgcggcgacccccgccggcctcatctcggcggcgatagcccacgccttcgcgctgttcgt 306 Query: 309 ggcggtgtcggtgggcgcc-acatctcgggcgggcacgtgaa 349 ||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 307 ggcggtgtccgtgggcgccaacatctccggcgggcacgtgaa 348
>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds Length = 1039 Score = 276 bits (139), Expect = 5e-71 Identities = 227/255 (89%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 96 aatgccggtcagcaggatcgccgtggggagccaccgggaggtgtacgaggtcggcgccct 155 ||||||| ||| ||||||||| |||||||||||| |||||||||| | |||||||| Sbjct: 1 aatgccgatcaataggatcgccctggggagccaccaggaggtgtaccacccgggcgccct 60 Query: 156 caaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctc 215 |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 caaggcggcgttcgctgagttcatctccaccctcatcttcgtcttcgccggccagggctc 120 Query: 216 cggcatggccttcagcaagctgagccccgacggcgtggcgacgccggccgggctgatctc 275 ||||||||||||||||||||||| | || |||| | |||| ||||| || |||||| | Sbjct: 121 cggcatggccttcagcaagctgaccggcggcggcccgacgaccccggcgggcctgatcgc 180 Query: 276 ggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgc-cacatctc 334 ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 181 ggcggcggtggcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacatctc 240 Query: 335 gggcgggcacgtgaa 349 ||||||||||||||| Sbjct: 241 gggcgggcacgtgaa 255
>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence Length = 1112 Score = 274 bits (138), Expect = 2e-70 Identities = 229/258 (88%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 93 gaaaatgccggtcagcaggatcgccgtggggagccaccgggaggtgtacgaggtcggcgc 152 |||||||||| ||| ||||||||| |||||||||||| |||||||||| | ||||| Sbjct: 94 gaaaatgccgatcaataggatcgccctggggagccaccaggaggtgtaccacccgggcgc 153 Query: 153 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccaggg 212 ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 154 cctcaaggcggcgttcgctgagttcatctccaccctcatcttcgtcttcgccggccaggg 213 Query: 213 ctccggcatggccttcagcaagctgagccccgacggcgtggcgacgccggccgggctgat 272 |||||||||||||||||||||||||| | || |||| | |||| ||||| || ||||| Sbjct: 214 ctccggcatggccttcagcaagctgaccggcggcggcccgacgaccccggcgggcctgat 273 Query: 273 ctcggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgc-cacat 331 | |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 274 cgcggcggcggtggcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacat 333 Query: 332 ctcgggcgggcacgtgaa 349 ||| |||||||||||||| Sbjct: 334 ctccggcgggcacgtgaa 351
>gb|AY104464.1| Zea mays PCO114899 mRNA sequence Length = 1167 Score = 274 bits (138), Expect = 2e-70 Identities = 229/258 (88%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 93 gaaaatgccggtcagcaggatcgccgtggggagccaccgggaggtgtacgaggtcggcgc 152 |||||||||| ||| ||||||||| |||||||||||| |||||||||| | ||||| Sbjct: 93 gaaaatgccgatcaataggatcgccctggggagccaccaggaggtgtaccacccgggcgc 152 Query: 153 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccaggg 212 ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 153 cctcaaggcggcgttcgctgagttcatctccaccctcatcttcgtcttcgccggccaggg 212 Query: 213 ctccggcatggccttcagcaagctgagccccgacggcgtggcgacgccggccgggctgat 272 |||||||||||||||||||||||||| | || |||| | |||| ||||| || ||||| Sbjct: 213 ctccggcatggccttcagcaagctgaccggcggcggcccgacgaccccggcgggcctgat 272 Query: 273 ctcggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgc-cacat 331 | |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 273 cgcggcggcggtggcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacat 332 Query: 332 ctcgggcgggcacgtgaa 349 ||| |||||||||||||| Sbjct: 333 ctccggcgggcacgtgaa 350
>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds Length = 1097 Score = 266 bits (134), Expect = 4e-68 Identities = 228/258 (88%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 93 gaaaatgccggtcagcaggatcgccgtggggagccaccgggaggtgtacgaggtcggcgc 152 |||||||||| ||| ||||||||| |||||||||||| |||||||||| | ||||| Sbjct: 90 gaaaatgccgatcaataggatcgccctggggagccaccaggaggtgtaccacccgggcgc 149 Query: 153 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccaggg 212 ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 150 cctcaaggcggcgttcgctgagttcatctccaccctcatcttcgtcttcgccggccaggg 209 Query: 213 ctccggcatggccttcagcaagctgagccccgacggcgtggcgacgccggccgggctgat 272 |||||||||||||||||||||||||| | || |||| | |||| ||||| || ||||| Sbjct: 210 ctccggcatggccttcagcaagctgaccggcggcggcccgacgaccccggcgggcctgat 269 Query: 273 ctcggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgc-cacat 331 | |||||||| | |||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 270 cgcggcggcggtggcgcacgcgttcgcgctgttcgtggcggtgtctgtgggcgcgaacat 329 Query: 332 ctcgggcgggcacgtgaa 349 ||| |||||||||||||| Sbjct: 330 ctccggcgggcacgtgaa 347
>ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 220 bits (111), Expect = 2e-54 Identities = 208/239 (87%), Gaps = 1/239 (0%) Strand = Plus / Plus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 16 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 75 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 231 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 135 Query: 232 aagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatagcgcac 291 ||||||| | || ||| | | |||| || |||||||||||| |||||||| | || ||| Sbjct: 136 aagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcccac 195 Query: 292 gcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacgtgaa 349 || ||||| ||||||||||||||||| || |||||| ||||||| ||||| |||||||| Sbjct: 196 gccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaa 254
>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds Length = 1080 Score = 220 bits (111), Expect = 2e-54 Identities = 208/239 (87%), Gaps = 1/239 (0%) Strand = Plus / Plus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 94 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 153 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 231 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 213 Query: 232 aagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatagcgcac 291 ||||||| | || ||| | | |||| || |||||||||||| |||||||| | || ||| Sbjct: 214 aagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcccac 273 Query: 292 gcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacgtgaa 349 || ||||| ||||||||||||||||| || |||||| ||||||| ||||| |||||||| Sbjct: 274 gccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaa 332
>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full insert sequence Length = 1034 Score = 220 bits (111), Expect = 2e-54 Identities = 208/239 (87%), Gaps = 1/239 (0%) Strand = Plus / Plus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 103 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 162 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 231 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 222 Query: 232 aagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatagcgcac 291 ||||||| | || ||| | | |||| || |||||||||||| |||||||| | || ||| Sbjct: 223 aagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcccac 282 Query: 292 gcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacgtgaa 349 || ||||| ||||||||||||||||| || |||||| ||||||| ||||| |||||||| Sbjct: 283 gccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaa 341
>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full insert sequence Length = 1082 Score = 220 bits (111), Expect = 2e-54 Identities = 208/239 (87%), Gaps = 1/239 (0%) Strand = Plus / Plus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 105 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 164 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 231 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 224 Query: 232 aagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatagcgcac 291 ||||||| | || ||| | | |||| || |||||||||||| |||||||| | || ||| Sbjct: 225 aagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcccac 284 Query: 292 gcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacgtgaa 349 || ||||| ||||||||||||||||| || |||||| ||||||| ||||| |||||||| Sbjct: 285 gccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaa 343
>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full insert sequence Length = 870 Score = 220 bits (111), Expect = 2e-54 Identities = 208/239 (87%), Gaps = 1/239 (0%) Strand = Plus / Plus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 101 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 160 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 231 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 220 Query: 232 aagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatagcgcac 291 ||||||| | || ||| | | |||| || |||||||||||| |||||||| | || ||| Sbjct: 221 aagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcccac 280 Query: 292 gcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacgtgaa 349 || ||||| ||||||||||||||||| || |||||| ||||||| ||||| |||||||| Sbjct: 281 gccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaa 339
>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full insert sequence Length = 1055 Score = 220 bits (111), Expect = 2e-54 Identities = 208/239 (87%), Gaps = 1/239 (0%) Strand = Plus / Plus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 101 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 160 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 231 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 220 Query: 232 aagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatagcgcac 291 ||||||| | || ||| | | |||| || |||||||||||| |||||||| | || ||| Sbjct: 221 aagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcccac 280 Query: 292 gcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacgtgaa 349 || ||||| ||||||||||||||||| || |||||| ||||||| ||||| |||||||| Sbjct: 281 gccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcggccacgtgaa 339
>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic protein (TIP) Length = 1146 Score = 168 bits (85), Expect = 8e-39 Identities = 175/203 (86%), Gaps = 4/203 (1%) Strand = Plus / Plus Query: 148 ggcgccctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 134 ggcgccctcaaggcggcgctcgctgagttcatctccaccctcatcttcgtcttcgccggc 193 Query: 208 cagggctccggcatggccttcagcaagctgagccccgacggcgtggcgacgccggccggg 267 |||||||||||| |||||| |||||||||||| || |||| | |||| || || | Sbjct: 194 cagggctccggcgtggcctacagcaagctgag---cggcggcatcacgaccccttccagt 250 Query: 268 ctgatctcggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcc 327 |||||||| || ||| | |||||||| ||||| ||||||||||| ||||| ||| ||||| Sbjct: 251 ctgatctccgctgcggtggcgcacgccttcgccctgttcgtggccgtgtccgtgagcgcc 310 Query: 328 -acatctcgggcgggcacgtgaa 349 ||||||| ||||| |||||||| Sbjct: 311 aacatctccggcggtcacgtgaa 333
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 149 bits (75), Expect = 7e-33 Identities = 108/119 (90%) Strand = Plus / Minus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 2546220 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 2546161 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcag 230 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2546160 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcag 2546102 Score = 81.8 bits (41), Expect = 1e-12 Identities = 78/89 (87%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 262 gccgggctgatctcggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtg 321 |||||||||||| |||||||| | || ||||| ||||| ||||||||||||||||| || Sbjct: 2545316 gccgggctgatcgcggcggcggtggcccacgccttcgccctgttcgtggcggtgtccgtc 2545257 Query: 322 ggcgcc-acatctcgggcgggcacgtgaa 349 |||||| ||||||| ||||| |||||||| Sbjct: 2545256 ggcgccaacatctccggcggccacgtgaa 2545228
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 149 bits (75), Expect = 7e-33 Identities = 108/119 (90%) Strand = Plus / Plus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 123874 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 123933 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcag 230 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123934 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcag 123992 Score = 81.8 bits (41), Expect = 1e-12 Identities = 78/89 (87%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 262 gccgggctgatctcggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtg 321 |||||||||||| |||||||| | || ||||| ||||| ||||||||||||||||| || Sbjct: 124778 gccgggctgatcgcggcggcggtggcccacgccttcgccctgttcgtggcggtgtccgtc 124837 Query: 322 ggcgcc-acatctcgggcgggcacgtgaa 349 |||||| ||||||| ||||| |||||||| Sbjct: 124838 ggcgccaacatctccggcggccacgtgaa 124866
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 149 bits (75), Expect = 7e-33 Identities = 108/119 (90%) Strand = Plus / Minus Query: 112 atcgccgtggggagccaccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgcc 171 ||||||||||||||||||| |||||||||| | || || |||||||||||| | ||| Sbjct: 2546330 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 2546271 Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcag 230 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2546270 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcag 2546212 Score = 81.8 bits (41), Expect = 1e-12 Identities = 78/89 (87%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 262 gccgggctgatctcggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtg 321 |||||||||||| |||||||| | || ||||| ||||| ||||||||||||||||| || Sbjct: 2545426 gccgggctgatcgcggcggcggtggcccacgccttcgccctgttcgtggcggtgtccgtc 2545367 Query: 322 ggcgcc-acatctcgggcgggcacgtgaa 349 |||||| ||||||| ||||| |||||||| Sbjct: 2545366 ggcgccaacatctccggcggccacgtgaa 2545338
>gb|AY389618.1| Hyacinthus orientalis mitochondrial tonoplast intrinsic protein (TIP1) mRNA, partial cds Length = 662 Score = 139 bits (70), Expect = 7e-30 Identities = 85/90 (94%) Strand = Plus / Plus Query: 147 cggcgccctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccgg 206 ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct: 50 cggcgccctcaaggcagccctcgccgagttcatctccaccctcatcttcgtcttcgccgg 109 Query: 207 ccagggctccggcatggccttcagcaagct 236 ||| ||||||||||| |||||||||||||| Sbjct: 110 ccaaggctccggcatcgccttcagcaagct 139
>ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 119 bits (60), Expect = 6e-24 Identities = 154/184 (83%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 71 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 130 Query: 227 tcagcaagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatag 286 |||||||||||| || ||||| |||||||| | ||||||||| | || | | | Sbjct: 131 tcagcaagctgacggacggcggcggcacgacgccgtcggggctgatcgccgcctccctgg 190 Query: 287 cgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacg 345 |||||||| | || ||||||||||||||| ||||||| ||| ||||||| |||||||||| Sbjct: 191 cgcacgcgctggccctgttcgtggcggtggcggtgggagccaacatctccggcgggcacg 250 Query: 346 tgaa 349 |||| Sbjct: 251 tgaa 254
>dbj|AK111768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066H10, full insert sequence Length = 1346 Score = 119 bits (60), Expect = 6e-24 Identities = 154/184 (83%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 95 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 154 Query: 227 tcagcaagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatag 286 |||||||||||| || ||||| |||||||| | ||||||||| | || | | | Sbjct: 155 tcagcaagctgacggacggcggcggcacgacgccgtcggggctgatcgccgcctccctgg 214 Query: 287 cgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacg 345 |||||||| | || ||||||||||||||| ||||||| ||| ||||||| |||||||||| Sbjct: 215 cgcacgcgctggccctgttcgtggcggtggcggtgggagccaacatctccggcgggcacg 274 Query: 346 tgaa 349 |||| Sbjct: 275 tgaa 278
>dbj|AK111747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B20, full insert sequence Length = 1149 Score = 119 bits (60), Expect = 6e-24 Identities = 154/184 (83%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 144 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 203 Query: 227 tcagcaagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatag 286 |||||||||||| || ||||| |||||||| | ||||||||| | || | | | Sbjct: 204 tcagcaagctgacggacggcggcggcacgacgccgtcggggctgatcgccgcctccctgg 263 Query: 287 cgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacg 345 |||||||| | || ||||||||||||||| ||||||| ||| ||||||| |||||||||| Sbjct: 264 cgcacgcgctggccctgttcgtggcggtggcggtgggagccaacatctccggcgggcacg 323 Query: 346 tgaa 349 |||| Sbjct: 324 tgaa 327
>dbj|AB114829.1| Oryza sativa (japonica cultivar-group) OsTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 970 Score = 119 bits (60), Expect = 6e-24 Identities = 154/184 (83%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 81 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 140 Query: 227 tcagcaagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatag 286 |||||||||||| || ||||| |||||||| | ||||||||| | || | | | Sbjct: 141 tcagcaagctgacggacggcggcggcacgacgccgtcggggctgatcgccgcctccctgg 200 Query: 287 cgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcacg 345 |||||||| | || ||||||||||||||| ||||||| ||| ||||||| |||||||||| Sbjct: 201 cgcacgcgctggccctgttcgtggcggtggcggtgggagccaacatctccggcgggcacg 260 Query: 346 tgaa 349 |||| Sbjct: 261 tgaa 264
>dbj|AB126924.1| Prunus persica Pr-gTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 1143 Score = 109 bits (55), Expect = 6e-21 Identities = 61/63 (96%) Strand = Plus / Plus Query: 166 ctcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcc 225 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 170 ctcgccgagttcatctccacgctgatcttcgtcttcgccggcgagggctccggcatggcc 229 Query: 226 ttc 228 ||| Sbjct: 230 ttc 232
>emb|AJ314583.1|POC314583 Posidonia oceanica mRNA for putative tonoplast intrinsic protein (tip1 gene) Length = 1112 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 150 cgccctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggcca 209 |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 133 cgccctcaaggccaccctcgccgagttcatctccaccctcatcttcgtcttcgccggcga 192 Query: 210 gggctccggcatggcct 226 ||||| ||||| |||| Sbjct: 193 aggctctggcatcgcct 209
>emb|X95650.1|TGTIP1GEN T.gesneriana mRNA for tonoplast intrinsic protein Length = 992 Score = 83.8 bits (42), Expect = 3e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 154 ctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccagggc 213 |||||||| ||||| || ||||||||||| ||| | |||||||||| ||||||||||||| Sbjct: 81 ctcaaggcagcgctggctgagttcatctctacgttgatcttcgtctacgccggccagggc 140 Query: 214 tccggcatggcctt 227 |||||||| ||||| Sbjct: 141 tccggcatagcctt 154
>gb|AF326500.1|AF326500 Zea mays tonoplast membrane integral protein ZmTIP1-2 mRNA, complete cds Length = 1021 Score = 83.8 bits (42), Expect = 3e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 ||||||||||||||||||||||||||||||||||||||||| || || || ||||||| Sbjct: 85 tcgccgagttcatctccacgctcatcttcgtcttcgccggctcaggatcggggatggcct 144 Query: 227 tcagcaagct 236 |||| ||||| Sbjct: 145 tcagtaagct 154
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 1e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 43109437 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 43109378 Query: 227 tcagcaagc 235 |||| |||| Sbjct: 43109377 tcagtaagc 43109369 Score = 65.9 bits (33), Expect = 8e-08 Identities = 58/65 (89%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 286 gcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcac 344 ||||||||| | || ||||||||||||||| ||||||| ||| ||||||| ||||||||| Sbjct: 43109237 gcgcacgcgctggccctgttcgtggcggtggcggtgggagccaacatctccggcgggcac 43109178 Query: 345 gtgaa 349 ||||| Sbjct: 43109177 gtgaa 43109173
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 81.8 bits (41), Expect = 1e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 106466 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 106407 Query: 227 tcagcaagc 235 |||| |||| Sbjct: 106406 tcagtaagc 106398 Score = 65.9 bits (33), Expect = 8e-08 Identities = 58/65 (89%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 286 gcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcc-acatctcgggcgggcac 344 ||||||||| | || ||||||||||||||| ||||||| ||| ||||||| ||||||||| Sbjct: 106266 gcgcacgcgctggccctgttcgtggcggtggcggtgggagccaacatctccggcgggcac 106207 Query: 345 gtgaa 349 ||||| Sbjct: 106206 gtgaa 106202
>dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E06, full insert sequence Length = 1024 Score = 81.8 bits (41), Expect = 1e-12 Identities = 78/89 (87%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 262 gccgggctgatctcggcggcgatagcgcacgcgttcgcgctgttcgtggcggtgtcggtg 321 |||||||||||| |||||||| | || ||||| ||||| ||||||||||||||||| || Sbjct: 725 gccgggctgatcgcggcggcggtggcccacgccttcgccctgttcgtggcggtgtccgtc 666 Query: 322 ggcgcc-acatctcgggcgggcacgtgaa 349 |||||| ||||||| ||||| |||||||| Sbjct: 665 ggcgccaacatctccggcggccacgtgaa 637
>dbj|AB048248.1| Pyrus communis Py-gTIP mRNA for gamma tonoplast intrinsic protein, complete cds Length = 1122 Score = 79.8 bits (40), Expect = 5e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 169 gccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggc 224 |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||| Sbjct: 144 gccgagttcatctcgacgctcatcttcgttttcgccggcgagggctccggaatggc 199
>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA, complete cds Length = 829 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 119 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 159
>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA, complete cds Length = 817 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 123 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 163
>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA, complete cds Length = 1067 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 125 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 165
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 ||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||| |||| Sbjct: 160 tcgccgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcct 219 Query: 227 tcagcaagctga 238 || |||||||| Sbjct: 220 acaccaagctga 231
>emb|AJ133748.1|PAB133748 Picea abies mRNA for major intrinsic protein Length = 1168 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 169 gccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 226 ||||||||| ||||||||||||||||||||||||| ||| | || |||| |||||||| Sbjct: 182 gccgagttcttctccacgctcatcttcgtcttcgctggcgaaggatccgtcatggcct 239
>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA, complete cds Length = 853 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||| |||||||||||||| ||||||||||||||||||||| Sbjct: 122 tcgctgagttcatctccaccctcatcttcgtcttcgccggc 162
>gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete cds Length = 1099 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 169 gccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttc 228 ||||||||||||||||| || || ||||| ||||||||| | || ||||||||||||||| Sbjct: 171 gccgagttcatctccacccttattttcgtattcgccggcgaaggttccggcatggccttc 230 Query: 229 a 229 | Sbjct: 231 a 231
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 13250274 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 13250314
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 12084 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 12124
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 167462 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 167502
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 157 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 197
>dbj|AK104377.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G09, full insert sequence Length = 1196 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 159 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 199
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 159 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 199
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 158 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 160 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 200
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 158 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 167 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 158 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>gb|AF133531.1|AF133531 Mesembryanthemum crystallinum water channel protein MipI (MipI) mRNA, complete cds Length = 1035 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 151 gccctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccag 210 ||||||||||| || | || ||||||||||||| |||||| || ||||| || || || Sbjct: 125 gccctcaaggctgcattggctgagttcatctccatgctcatttttgtctttgctggacaa 184 Query: 211 ggctccggcatggccttcagcaagct 236 ||||| |||||||| ||||||||||| Sbjct: 185 ggctctggcatggcattcagcaagct 210
>dbj|AB206105.1| Mimosa pudica tip1;2 mRNA for tonoplast intrinsic protein 1;2, complete cds Length = 963 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggc 224 ||||||||||||| ||||||||| || |||||||| | |||||||||||||| Sbjct: 129 gagttcatctccatgctcatctttgtgttcgccggtgaaggctccggcatggc 181
>gb|U43291.1|MCU43291 Mesembryanthemum crystallinum tonoplast intrinsic protein (TIP) mRNA, complete cds Length = 1235 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttc 228 |||||||||||||| | |||||||||||||| ||| |||| || |||||||||||| Sbjct: 127 gagttcatctccaccttgatcttcgtcttcgctggcgagggttctggcatggccttc 183
>gb|AF275315.1|AF275315 Lotus japonicus water-selective transport intrinsic membrane protein 1 mRNA, complete cds Length = 1162 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||||| |||||||||||||||||||| Sbjct: 135 gagttcatctccaccttcatcttcgtcttcgccggc 170
>dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b, complete sequence Length = 41820 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 172 gagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||||| |||||||||||||||||||| Sbjct: 10770 gagttcatctccaccttcatcttcgtcttcgccggc 10735
>ref|XM_429115.1| PREDICTED: Gallus gallus similar to aquaporin 5 (LOC431562), partial mRNA Length = 1194 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 171 cgagttcatctccacgctcatcttcgtcttc 201 ||||||||||||||| ||||||||||||||| Sbjct: 48 cgagttcatctccactctcatcttcgtcttc 78
>ref|XM_428856.1| PREDICTED: Gallus gallus similar to Aquaporin 5 (LOC431305), mRNA Length = 1233 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 171 cgagttcatctccacgctcatcttcgtcttc 201 ||||||||||||||| ||||||||||||||| Sbjct: 48 cgagttcatctccactctcatcttcgtcttc 78
>emb|AJ243309.1|PSA243309 Pisum sativum mRNA for putative tonoplast intrinsic protein (gene tip1-1) Length = 1104 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgccgg 206 |||||||||||||| ||||||||||||||||||| Sbjct: 151 gagttcatctccactttcatcttcgtcttcgccgg 185
>gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 169 gccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| |||| ||| ||||||||||||||||| Sbjct: 294 gccgagttcatcgccaccctcctcttcgtcttcgccggc 332
>gb|AY105015.1| Zea mays PCO137646 mRNA sequence Length = 1238 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 169 gccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| |||| ||| ||||||||||||||||| Sbjct: 293 gccgagttcatcgccaccctcctcttcgtcttcgccggc 331
>ref|NM_113559.3| Arabidopsis thaliana TIP2 (TONOPLAST INTRINSIC PROTEIN 2); water channel AT3G26520 (TIP2) mRNA, complete cds Length = 1201 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 178 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 226
>gb|AY079114.1| Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 762 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 66 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 114
>gb|AF419613.1|AF419613 Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 1061 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 128 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 176
>gb|AF428341.1|AF428341 Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 1066 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 133 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 181
>gb|AF004393.1|AF004393 Arabidopsis thaliana salt-stress induced tonoplast intrinsic protein mRNA, complete cds Length = 1072 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 80 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 128
>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA, complete cds Length = 1073 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttc 228 ||||||||| |||| ||| ||||||||||||||||| ||| |||| ||| |||||| Sbjct: 137 gagttcatcgccaccctcctcttcgtcttcgccggcgtgggttccgccatcgccttc 193
>emb|BX822807.1|CNS0A75T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 116 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 164
>emb|BX822624.1|CNS0A742 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB53ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1020 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>emb|BX824073.1|CNS0A6T2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1008 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>emb|BX822975.1|CNS0A733 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZD01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1054 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 105 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 153
>emb|BX824311.1|CNS0A6PE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 995 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 123 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 171
>emb|BX823607.1|CNS0A6MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZB09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1012 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>emb|BX842163.1|CNS09YDT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 921 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>emb|BX842138.1|CNS09YDN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1062 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFE16 Length = 82646 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 16232 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 16184
>gb|AF057137.1|AF057137 Arabidopsis thaliana gamma tonoplast intrinsic protein 2 (TIP2) mRNA, complete cds Length = 1035 Score = 48.1 bits (24), Expect = 0.019 Identities = 42/48 (87%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccgg 206 |||||||||||| ||||| ||||| || | ||||||||||||||||| Sbjct: 119 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccgg 166
>dbj|D45077.1|CUCMP23A Cucurbita cv. Kurokawa Amakuri mRNA for MP23 precursor, complete cds Length = 1249 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||| ||||| |||||||||||||||||||| Sbjct: 323 gagttcatttccactttcatcttcgtcttcgccggc 358
>emb|Y08161.1|NTAQP1 N.tabacum mRNA for aquaporin 1 Length = 978 Score = 46.1 bits (23), Expect = 0.076 Identities = 68/83 (81%) Strand = Plus / Plus Query: 154 ctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccagggc 213 ||||||||||| | || |||||||||| || || |||||||| ||||| || ||||| Sbjct: 118 ctcaaggcggccttggcggagttcatctgtaccctgatcttcgttttcgcaggtcagggt 177 Query: 214 tccggcatggccttcagcaagct 236 || |||||||| |||| |||||| Sbjct: 178 tctggcatggctttcaacaagct 200
>gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds Length = 968 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 169 gccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||||| ||||||| ||||||||| Sbjct: 70 gccgagttcatcgccacgctgctcttcgtgttcgccggc 108
>gb|AY106931.1| Zea mays PCO140073 mRNA sequence Length = 1069 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 169 gccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||||| ||||||| ||||||||| Sbjct: 147 gccgagttcatcgccacgctgctcttcgtgttcgccggc 185
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 292 gcgttcgcgctgttcgtggcggtgtcggtgg 322 |||||||||||||||| |||| ||||||||| Sbjct: 749227 gcgttcgcgctgttcgcggcgctgtcggtgg 749257
>gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds Length = 1060 Score = 46.1 bits (23), Expect = 0.076 Identities = 35/39 (89%) Strand = Plus / Plus Query: 169 gccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||||||||| ||||||| ||||||| ||||||||| Sbjct: 129 gccgagttcatcgccacgctgctcttcgtgttcgccggc 167
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 tcttcgtcttcgccggccagggctcc 216 ||||||||||| |||||||||||||| Sbjct: 16593 tcttcgtcttccccggccagggctcc 16618
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 191 tcttcgtcttcgccggccagggctcc 216 ||||||||||| |||||||||||||| Sbjct: 124531 tcttcgtcttccccggccagggctcc 124506
>emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosynthetic gene cluster Length = 84985 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 191 tcttcgtcttcgccggccagggctcc 216 ||||||||||| |||||||||||||| Sbjct: 32158 tcttcgtcttccccggccagggctcc 32133
>gb|AF326504.1|AF326504 Zea mays tonoplast membrane integral protein ZmTIP3-1 mRNA, complete cds Length = 989 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 acatctcgggcgggcacgtgaa 349 |||||||||||||||||||||| Sbjct: 295 acatctcgggcgggcacgtgaa 316 Score = 40.1 bits (20), Expect = 4.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 170 ccgagttcatctccacgctcatcttcgtcttcgccg 205 ||||||||||| |||| ||||||||||||||||| Sbjct: 139 ccgagttcatcgccaccgccatcttcgtcttcgccg 174
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 atgccggtcagcaggatcgccg 118 |||||||||||||||||||||| Sbjct: 270969 atgccggtcagcaggatcgccg 270990
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 gcgccctcaaggcggcgctcg 169 ||||||||||||||||||||| Sbjct: 428262 gcgccctcaaggcggcgctcg 428282
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 tcttcgtcttcgccggccagggctc 215 ||||||||||| ||||||||||||| Sbjct: 57565 tcttcgtcttccccggccagggctc 57589 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 tcttcgtcttcgccggccagggctc 215 ||||||||||| ||||||||||||| Sbjct: 35112 tcttcgtcttccccggccagggctc 35136
>ref|XM_418189.1| PREDICTED: Gallus gallus similar to tight junction protein 3 (zona occludens 3) (LOC420070), mRNA Length = 2487 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 aagctgagccccgacggcgtg 252 ||||||||||||||||||||| Sbjct: 1100 aagctgagccccgacggcgtg 1080
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 cgcgttcgcgctgttcgtggcggtg 315 |||||||||||||||||||| |||| Sbjct: 5296285 cgcgttcgcgctgttcgtggtggtg 5296309
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 cgcgttcgcgctgttcgtggcggtgtcgg 319 ||||||||||||| |||||||| |||||| Sbjct: 3907253 cgcgttcgcgctgatcgtggcgttgtcgg 3907281
>emb|AL672113.1|MLO672113 Mesorhizobium loti R7A symbiosis island; segment 2/4 Length = 152050 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 cagcaagctgagccccgacggcgtg 252 ||||||||||||| ||||||||||| Sbjct: 130575 cagcaagctgagcgccgacggcgtg 130599
>gb|AE011975.1| Xanthomonas axonopodis pv. citri str. 306, section 353 of 469 of the complete genome Length = 12826 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 cgcgttcgcgctgttcgtggcggtgtcgg 319 ||||||||||||| |||||||| |||||| Sbjct: 12067 cgcgttcgcgctgatcgtggcgttgtcgg 12095
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 cggcgtggcgacgccggccgggctg 270 ||||| ||||||||||||||||||| Sbjct: 20319477 cggcggggcgacgccggccgggctg 20319501
>gb|AF342809.1|AF342809 Zea mays tonoplast membrane integral protein ZmTIP3-2 mRNA, complete cds Length = 1156 Score = 42.1 bits (21), Expect = 1.2 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 306 cgtggcggtgtcggtgggcgcca-catctcgggcgggcacgtgaa 349 |||||||||| |||||| || || | ||||||||||||||||||| Sbjct: 344 cgtggcggtggcggtggccgtcaacgtctcgggcgggcacgtgaa 388 Score = 40.1 bits (20), Expect = 4.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 170 ccgagttcatctccacgctcatcttcgtcttcgccg 205 ||||||||||| |||| ||||||||||||||||| Sbjct: 202 ccgagttcatcgccaccgccatcttcgtcttcgccg 237
>ref|NM_001009273.1| Ovis aries aquaporin 5 (AQP5), mRNA Length = 815 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 153 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttc 201 ||||||||||| | |||| |||||| | |||| ||||||||||||||| Sbjct: 42 cctcaaggcggtgttcgcagagttcctggccaccctcatcttcgtcttc 90
>gb|AY177613.1| Ovis aries aquaporin 5 (AQP5) mRNA, complete cds Length = 815 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 153 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttc 201 ||||||||||| | |||| |||||| | |||| ||||||||||||||| Sbjct: 42 cctcaaggcggtgttcgcagagttcctggccaccctcatcttcgtcttc 90
>gb|AF118381.1|AF118381 Brassica napus tonoplast intrinsic protein (gamma-TIP2) mRNA, complete cds Length = 1020 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 207 |||||| ||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 75 ggcggccctcgctgagtttatctcgactttgatcttcgtcttcgccggc 123
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 cggcgtggcgacgccggccgggctg 270 ||||| ||||||||||||||||||| Sbjct: 20245691 cggcggggcgacgccggccgggctg 20245715
>emb|AL731745.5|CNS08C7U Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0070A12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 41351 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 cggcgtggcgacgccggccgggctg 270 ||||| ||||||||||||||||||| Sbjct: 32908 cggcggggcgacgccggccgggctg 32932
>ref|XM_467137.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgc 203 ||||||||| |||| ||| ||||||||||||| Sbjct: 70 gagttcatcgccaccctcctcttcgtcttcgc 101
>ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative beta-tonoplast intrinsic protein (OSJNBa0051D19.19), mRNA Length = 1186 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 catcttcgtcttcgccggccagggctcc 216 ||||||||||||||||| | |||||||| Sbjct: 259 catcttcgtcttcgccgccgagggctcc 286
>ref|NM_196501.1| Oryza sativa (japonica cultivar-group) putative class III chitinase (OSJNBa0032I20.12), mRNA Length = 867 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 150 cggcgtggcgccgccggccgggct 127
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 atgccggtcagcaggatcgc 116 |||||||||||||||||||| Sbjct: 1266308 atgccggtcagcaggatcgc 1266327
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cggcgctcgccgagttcatc 180 |||||||||||||||||||| Sbjct: 141835 cggcgctcgccgagttcatc 141816
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 cggccagggctccggcatgg 223 |||||||||||||||||||| Sbjct: 131575 cggccagggctccggcatgg 131594
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 catcttcgtcttcgccggccagggctcc 216 ||||||||||||||||| | |||||||| Sbjct: 26891 catcttcgtcttcgccgccgagggctcc 26864
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 286 gcgcacgcgttcgcgctgttcgtggcgg 313 |||| |||||||||||| |||||||||| Sbjct: 2107618 gcgcccgcgttcgcgctcttcgtggcgg 2107591
>emb|X95952.1|HAAP H.annuus mRNA for aquaporin Length = 931 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgc 203 |||||||||||||| || ||||||||||||| Sbjct: 122 gagttcatctccacccttctcttcgtcttcgc 153
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cttcgtcttcgccggccagggctc 215 |||||||||| ||||||||||||| Sbjct: 4273 cttcgtcttccccggccagggctc 4296
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cttcgtcttcgccggccagggctc 215 ||||| |||||||||||||||||| Sbjct: 27998 cttcgccttcgccggccagggctc 28021
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 28162 cggcgtggcgccgccggccgggct 28139
>gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone BACR16G12, complete sequence Length = 154681 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgtggcggtgtcggtgggcg 325 |||||||||||||||||||| Sbjct: 135243 cgtggcggtgtcggtgggcg 135262
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 gtggcgacgccggccgggctgatc 273 ||||||||||||| |||||||||| Sbjct: 1972635 gtggcgacgccgggcgggctgatc 1972658
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tcgtcttcgccggccagggc 213 |||||||||||||||||||| Sbjct: 3460935 tcgtcttcgccggccagggc 3460916
>gb|AC091387.2| Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone BACR13P15, complete sequence Length = 171222 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgtggcggtgtcggtgggcg 325 |||||||||||||||||||| Sbjct: 4208 cgtggcggtgtcggtgggcg 4227
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctcaaggcggcgctcgccga 173 |||||||||||||||||||| Sbjct: 29799 ctcaaggcggcgctcgccga 29780
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 catcttcgtcttcgccggccagggctcc 216 ||||||||||||||||| | |||||||| Sbjct: 18186237 catcttcgtcttcgccgccgagggctcc 18186264 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 14088524 cggcgtggcgccgccggccgggct 14088501
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cggcgctcgccgagttcatc 180 |||||||||||||||||||| Sbjct: 27266867 cggcgctcgccgagttcatc 27266848
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 172 gagttcatctccacgctcatcttcgtcttcgc 203 ||||||||| |||| ||| ||||||||||||| Sbjct: 26627994 gagttcatcgccaccctcctcttcgtcttcgc 26627963
>gb|AF326509.1|AF326509 Zea mays tonoplast membrane integral protein ZmTIP5-1 mRNA, complete cds Length = 1021 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ctcgccgagttcatctccac 185 |||||||||||||||||||| Sbjct: 119 ctcgccgagttcatctccac 138
>emb|BX842211.1|CNS09YE1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZH05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1014 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 159 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcg 202 |||||||||||| ||||| ||||| || | ||||||||||||| Sbjct: 102 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcg 145
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 cggccgggctgatctcggcggcga 283 ||||||||||||||||||| |||| Sbjct: 4837471 cggccgggctgatctcggccgcga 4837448
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 172 gagttcatctccacgctcatcttcgtcttcgc 203 ||||||||| |||| ||| ||||||||||||| Sbjct: 170375 gagttcatcgccaccctcctcttcgtcttcgc 170344
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 172 gagttcatctccacgctcatcttcgtcttcgc 203 ||||||||| |||| ||| ||||||||||||| Sbjct: 62155 gagttcatcgccaccctcctcttcgtcttcgc 62124
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 104653 cggcgtggcgccgccggccgggct 104630
>dbj|AK119555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E12, full insert sequence Length = 1089 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 174 cggcgtggcgccgccggccgggct 151
>dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full insert sequence Length = 1200 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 catcttcgtcttcgccggccagggctcc 216 ||||||||||||||||| | |||||||| Sbjct: 268 catcttcgtcttcgccgccgagggctcc 295
>dbj|AB114830.1| Oryza sativa (japonica cultivar-group) OsTIP2 mRNA for tonoplast intrinsic protein, complete cds Length = 1013 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgc 203 ||||||||| |||| ||| ||||||||||||| Sbjct: 143 gagttcatcgccaccctcctcttcgtcttcgc 174
>dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast intrinsic protein, complete cds Length = 1178 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 catcttcgtcttcgccggccagggctcc 216 ||||||||||||||||| | |||||||| Sbjct: 251 catcttcgtcttcgccgccgagggctcc 278
>dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H12, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cggcgctcgccgagttcatc 180 |||||||||||||||||||| Sbjct: 403 cggcgctcgccgagttcatc 422
>dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full insert sequence Length = 1787 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 catcttcgtcttcgccggccagggctcc 216 ||||||||||||||||| | |||||||| Sbjct: 922 catcttcgtcttcgccgccgagggctcc 895
>dbj|AK104292.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F06, full insert sequence Length = 1108 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 169 cggcgtggcgccgccggccgggct 146
>dbj|AK104222.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E05, full insert sequence Length = 1069 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 174 cggcgtggcgccgccggccgggct 151
>dbj|AK099101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025I19, full insert sequence Length = 1068 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 173 cggcgtggcgccgccggccgggct 150
>dbj|AK060033.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H08, full insert sequence Length = 1134 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 174 cggcgtggcgccgccggccgggct 151
>gb|AY103628.1| Zea mays PCO109231 mRNA sequence Length = 1907 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 acgctcatcttcgtcttcgccggc 207 ||||||||||||||| |||||||| Sbjct: 1492 acgctcatcttcgtcctcgccggc 1515
>gb|AE003817.3| Drosophila melanogaster chromosome 2R, section 33 of 73 of the complete sequence Length = 265472 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgtggcggtgtcggtgggcg 325 |||||||||||||||||||| Sbjct: 218978 cgtggcggtgtcggtgggcg 218959
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 tcttcgtcttcgccggccagggct 214 ||||||||||| |||||||||||| Sbjct: 82695 tcttcgtcttccccggccagggct 82672
>gb|AC005643.1|AC005643 Drosophila melanogaster, chromosome 2R, region 50C5-50C8, P1 clone DS02972, complete sequence Length = 80389 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgtggcggtgtcggtgggcg 325 |||||||||||||||||||| Sbjct: 25887 cgtggcggtgtcggtgggcg 25906
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 catcttcgtcttcgccggccagggctcc 216 ||||||||||||||||| | |||||||| Sbjct: 18195490 catcttcgtcttcgccgccgagggctcc 18195517 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cggcgtggcgacgccggccgggct 269 |||||||||| ||||||||||||| Sbjct: 14096766 cggcgtggcgccgccggccgggct 14096743
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 172 gagttcatctccacgctcatcttcgtcttcgc 203 ||||||||| |||| ||| ||||||||||||| Sbjct: 332808 gagttcatcgccaccctcctcttcgtcttcgc 332777 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 172 gagttcatctccacgctcatcttcgtcttcgc 203 ||||||||| |||| ||| ||||||||||||| Sbjct: 249840 gagttcatcgccaccctcctcttcgtcttcgc 249871
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctcaaggcggcgctcgccga 173 |||||||||||||||||||| Sbjct: 274352 ctcaaggcggcgctcgccga 274333 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,653,353 Number of Sequences: 3902068 Number of extensions: 1653353 Number of successful extensions: 40968 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39262 Number of HSP's gapped (non-prelim): 1680 length of query: 353 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 331 effective length of database: 17,147,199,772 effective search space: 5675723124532 effective search space used: 5675723124532 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
