ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbags9p23 | 670 | AV920259 | not_full | dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D10, full insert sequence Length = 893 | 102 | not_full | UBE2N_RAT (Q9EQX9) Ubiquitin-conjugating enzyme E2 N (EC 6.3.2.19) (Ubiquitin-protein ligase N) (Ubiquitin carrier protein N) (Bendless-like ubiquitin-conjugating enzyme) Length = 152 | 174 | -- | --- | - | -- | --- | - |
| rbags9p22 | 686 | AV834297 | not_full | gb|BT018848.1| Zea mays clone EL01N0555E10.d mRNA sequence Length = 2515 | 113 | not_full | COX3_LEITA (P14546) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III) Length = 284 | 14 | -- | --- | - | -- | --- | - |
| rbags9p21 | 231 | AV920258 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 20 | not_full | Y1079_METJA (Q58479) Hypothetical protein MJ1079 Length = 397 | 3 | -- | --- | - | -- | --- | - |
| rbags9p19 | 654 | AV920257 | not_full | ref|XM_477264.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1394 | 71 | not_full | ERBB3_PONPY (Q5RB22) Receptor tyrosine-protein kinase erbB-3 precursor (EC 2.7.10.1) Length = 1342 | 8 | -- | --- | - | -- | --- | - |
| rbags9p17 | 532 | AV920256 | not_full | gb|AY224488.1| Oryza sativa (japonica cultivar-group) isolate 30843 putative ubiquitin-specific protease mRNA, partial cds Length = 2529 | 305 | not_full | UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36) Length = 1121 | 14 | -- | --- | - | -- | --- | - |
| rbags9p16 | 694 | AV920255 | not_full | gb|BT009392.1| Triticum aestivum clone wlm96.pk037.f18:fis, full insert mRNA sequence Length = 1654 | 41 | not_full | ARGC_ARATH (Q93Z70) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 401 | 148 | -- | --- | - | -- | --- | - |
| rbags9p15 | 583 | AV920254 | not_full | emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress responsive protein Length = 1841 | 61 | not_full | COX20_ASHGO (Q75D23) Cytochrome c oxidase protein 20, mitochondrial precursor Length = 194 | 2 | -- | --- | - | -- | --- | - |
| rbags9p14 | 118 | AV834296 | not_full | gb|AC122536.4| Mus musculus BAC clone RP24-542K22 from chromosome 17, complete sequence Length = 150022 | 19 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9p12 | 726 | AV920253 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbags9p10 | 702 | AV920252 | not_full | ref|XM_474422.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1905 | 48 | not_full | EXOC7_MOUSE (O35250) Exocyst complex component 7 (Exocyst complex component Exo70) Length = 697 | 33 | -- | --- | - | -- | --- | - |
| rbags9p07 | 653 | AV920251 | not_full | gb|AC080125.6| Homo sapiens BAC clone RP11-175O15 from 2, complete sequence Length = 81057 | 63 | not_full | SRD41_CAEEL (O17821) Serpentine receptor class delta-41 (Protein srd-41) Length = 324 | 1 | -- | --- | - | -- | --- | - |
| rbags9p06 | 606 | AV920250 | not_full | gb|AF084005.1|AF084005 Avena fatua ras-like small monomeric GTP-binding protein (SAR1) mRNA, complete cds Length = 801 | 118 | not_full | SAR1A_ARATH (O04834) GTP-binding protein SAR1A Length = 193 | 132 | -- | --- | - | -- | --- | - |
| rbags9p05 | 689 | AV920249 | not_full | gb|AY059462.1| Triticum aestivum 68 kDa protein HP68 mRNA, complete cds Length = 1815 | 148 | not_full | ABCE1_MOUSE (P61222) ATP-binding cassette sub-family E member 1 (RNase L inhibitor) (Ribonuclease 4 inhibitor) (RNS4I) Length = 599 | 500 | -- | --- | - | -- | --- | - |
| rbags9p04 | 33 | AV834295 | not_full | emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 | 8 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9o24 | 654 | AV920248 | not_full | gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence Length = 157067 | 93 | not_full | ARFI_ARATH (Q9XED8) Auxin response factor 9 Length = 638 | 15 | -- | --- | - | -- | --- | - |
| rbags9o23 | 687 | AV920247 | not_full | gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds Length = 2397 | 500 | not_full | HSP83_ORYSA (Q07078) Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) Length = 699 | 162 | -- | --- | - | -- | --- | - |
| rbags9o22 | 607 | AV920246 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 500 | not_full | HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3 Length = 161 | 72 | -- | --- | - | -- | --- | - |
| rbags9o21 | 606 | AV920245 | not_full | gb|L11740.1|BLYEFIA Barley elongation factor 1 alpha, (EF-1A) mRNA sequence Length = 1725 | 500 | not_full | EF1A2_HORVU (Q40034) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 143 | -- | --- | - | -- | --- | - |
| rbags9o20 | 579 | AV920244 | not_full | dbj|AK067286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A22, full insert sequence Length = 622 | 66 | not_full | VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase G subunit 1) (Vacuolar proton pump G subunit 1) Length = 110 | 8 | -- | --- | - | -- | --- | - |
| rbags9o18 | 653 | AV920243 | not_full | gb|AF040700.1|AF040700 Oryza sativa methionyl-tRNA synthetase mRNA, complete cds Length = 2850 | 71 | not_full | SYM_ORYSA (Q9ZTS1) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) Length = 804 | 256 | -- | --- | - | -- | --- | - |
| rbags9o14 | 244 | AV920242 | not_full | gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, complete sequence Length = 247961 | 9 | not_full | RHG08_MOUSE (Q9CXP4) Rho-GTPase-activating protein 8 Length = 425 | 12 | -- | --- | - | -- | --- | - |
| rbags9o13 | 575 | AV920241 | not_full | ref|NM_192424.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1239 | 201 | not_full | IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 | 34 | -- | --- | - | -- | --- | - |
| rbags9o11 | 490 | AV920240 | not_full | emb|AM039893.1| Hordeum vulgare sam1 gene for putative AdoMet synthase 1 Length = 1515 | 226 | not_full | METK_HORVU (P50299) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) Length = 394 | 195 | -- | --- | - | -- | --- | - |
| rbags9o10 | 686 | AV920239 | not_full | ref|XM_475281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 | 59 | not_full | CCD47_BRARE (Q66I12) Coiled-coil domain-containing protein 47 precursor Length = 486 | 7 | -- | --- | - | -- | --- | - |
| rbags9o08 | 718 | AV920238 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbags9o07 | 490 | AV920237 | not_full | gb|DQ013311.1| Oligocottus maculosus heat shock protein 90 (Hsp90) mRNA, partial cds Length = 811 | 11 | not_full | STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2.7.11.1) Length = 939 | 2 | -- | --- | - | -- | --- | - |
| rbags9o06 | 689 | AV920236 | not_full | ref|NM_191342.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 | 39 | not_full | TIM50_ARATH (Q8VYE2) Import inner membrane translocase subunit TIM50, mitochondrial precursor Length = 376 | 39 | -- | --- | - | -- | --- | - |
| rbags9o03 | 677 | AV920235 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 56 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 79 | -- | --- | - | -- | --- | - |
| rbags9o02 | 637 | AV920234 | not_full | ref|NM_192031.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 591 | 44 | not_full | RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20 Length = 98 | 111 | -- | --- | - | -- | --- | - |
| rbags9n24 | 643 | AV920233 | not_full | emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit Length = 1834 | 91 | not_full | RUBA_WHEAT (P08823) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) Length = 543 | 462 | -- | --- | - | -- | --- | - |
| rbags9n21 | 563 | AV834294 | not_full | ref|NM_196468.1| Oryza sativa (japonica cultivar-group) contains similarity to chromaffin granule ATPase II homolog (OSJNBa0015J03.24), mRNA Length = 3429 | 193 | not_full | ALA3_ARATH (Q9XIE6) Putative phospholipid-transporting ATPase 3 (EC 3.6.3.1) (Aminophospholipid flippase 3) Length = 1213 | 10 | -- | --- | - | -- | --- | - |
| rbags9n18 | 544 | AV920232 | not_full | gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 | 99 | not_full | ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 583 | 45 | -- | --- | - | -- | --- | - |
| rbags9n17 | 687 | AV834293 | not_full | dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 | 46 | not_full | RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) Length = 791 | 6 | -- | --- | - | -- | --- | - |
| rbags9n15 | 625 | AV920231 | not_full | gb|AY864064.1| Triticum aestivum gamma-glutamylcysteine synthetase (GSH1) mRNA, complete cds Length = 1794 | 75 | not_full | GSH1_ARATH (P46309) Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) Length = 522 | 15 | -- | --- | - | -- | --- | - |
| rbags9n14 | 696 | AV920230 | not_full | ref|NM_192090.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 | 238 | not_full | ATPBM_MAIZE (P19023) ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14) Length = 553 | 207 | -- | --- | - | -- | --- | - |
| rbags9n11 | 675 | AV920229 | not_full | gb|U72212.1|TAU72212 Triticum aestivum manganese superoxide dismutase (SOD3.1) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 934 | 353 | not_full | SODM1_MAIZE (P09233) Superoxide dismutase [Mn] 3.1, mitochondrial precursor (EC 1.15.1.1) Length = 235 | 207 | -- | --- | - | -- | --- | - |
| rbags9n10 | 626 | AV920228 | not_full | gb|AF084005.1|AF084005 Avena fatua ras-like small monomeric GTP-binding protein (SAR1) mRNA, complete cds Length = 801 | 118 | not_full | SAR1A_ARATH (O04834) GTP-binding protein SAR1A Length = 193 | 132 | -- | --- | - | -- | --- | - |
| rbags9n09 | 665 | AV920227 | not_full | gb|BT009586.1| Triticum aestivum clone wre1n.pk0047.b2:fis, full insert mRNA sequence Length = 890 | 52 | not_full | XPO1_HUMAN (O14980) Exportin-1 (Exp1) (Chromosome region maintenance 1 protein homolog) Length = 1071 | 24 | -- | --- | - | -- | --- | - |
| rbags9n08 | 460 | AV920226 | not_full | gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 | 45 | not_full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 3 | -- | --- | - | -- | --- | - |
| rbags9n07 | 699 | AV920225 | not_full | dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N09, full insert sequence Length = 1195 | 87 | not_full | PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1) (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 | 140 | -- | --- | - | -- | --- | - |
| rbags9n06 | 397 | AV834292 | not_full | ref|XM_470167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2541 | 50 | not_full | YNP6_YEAST (P53898) Hypothetical 33.7 kDa protein in YGP1-YCK2 intergenic region Length = 299 | 10 | -- | --- | - | -- | --- | - |
| rbags9n05 | 686 | AV920224 | not_full | dbj|AK058672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H04, full insert sequence Length = 2175 | 46 | not_full | SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF Length = 1097 | 19 | -- | --- | - | -- | --- | - |
| rbags9n04 | 620 | AV920223 | not_full | gb|AY105376.1| Zea mays PCO091943 mRNA sequence Length = 1560 | 39 | not_full | KIN2_YEAST (P13186) Serine/threonine-protein kinase KIN2 (EC 2.7.11.1) Length = 1147 | 6 | -- | --- | - | -- | --- | - |
| rbags9n03 | 593 | AV834291 | not_full | gb|BT019094.1| Zea mays clone Contig693.F mRNA sequence Length = 927 | 120 | not_full | RL15E_METMP (P61370) 50S ribosomal protein L15e Length = 194 | 12 | -- | --- | - | -- | --- | - |
| rbags9n02 | 393 | AV920222 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 145 | not_full | CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa) Length = 508 | 34 | -- | --- | - | -- | --- | - |
| rbags9m23 | 417 | AV920221 | not_full | gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 | 18 | not_full | IF2_CHLCV (Q823F2) Translation initiation factor IF-2 Length = 887 | 220 | -- | --- | - | -- | --- | - |
| rbags9m22 | 77 | AV920220 | not_full | gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence Length = 194261 | 2 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9m20 | 632 | AV920219 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 34 | not_full | YJF8_YEAST (P47041) Hypothetical 60.8 kDa protein in BTN1-PEP8 intergenic region Length = 543 | 6 | -- | --- | - | -- | --- | - |
| rbags9m19 | 649 | AV920218 | not_full | dbj|AK101024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150D19, full insert sequence Length = 2454 | 42 | not_full | MAON_SOLTU (P37225) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME) Length = 601 | 75 | -- | --- | - | -- | --- | - |
| rbags9m18 | 752 | AV920217 | not_full | dbj|AK067474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107G14, full insert sequence Length = 2090 | 64 | not_full | PUR8_HAEIN (P44797) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase) (ASL) Length = 456 | 33 | -- | --- | - | -- | --- | - |
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