ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9o20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3... 91 3e-18
2VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3... 90 5e-18
3VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3... 79 1e-14
4VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3... 76 6e-14
5VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14... 76 6e-14
6OR83A_DROME (Q9VNB3) Putative odorant receptor 83a 31 2.2
7GCSH_MOUSE (Q91WK5) Glycine cleavage system H protein, mitochond... 30 6.5
8Y603_HAEIN (P44773) Protein HI0603 29 8.5

>VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 51/110 (46%), Positives = 60/110 (54%)
 Frame = -2

Query: 494 MDASRRPSGIXXXXXXXXXXXQIVNXXXXXXXXXXXXXXXXXXXXXXXXXAQMEADFQRK 315
           M +S   +GI            IVN                         A MEA+FQRK
Sbjct: 1   MASSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRK 60

Query: 314 LTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVXXVKN 165
           L +TSGDSGANVKRLEQET+ KIE LK +A  +SP+V+QMLLRHV  VKN
Sbjct: 61  LEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110



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>VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 50/110 (45%), Positives = 60/110 (54%)
 Frame = -2

Query: 494 MDASRRPSGIXXXXXXXXXXXQIVNXXXXXXXXXXXXXXXXXXXXXXXXXAQMEADFQRK 315
           M+++R    I            IVN                         AQ E DFQRK
Sbjct: 1   MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60

Query: 314 LTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVXXVKN 165
           L ETSGDSGANVKRLEQET+ KIEQLK +A+ IS +V++MLL+HV  VKN
Sbjct: 61  LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110



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>VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase|
           G subunit 2) (Vacuolar proton pump G subunit 2)
          Length = 111

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 39/58 (67%), Positives = 47/58 (81%)
 Frame = -2

Query: 338 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVXXVKN 165
           MEA+FQR + +TSGDSGANVKRLEQET  KI+ LK +A +IS +V+QMLLR V  VKN
Sbjct: 54  MEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111



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>VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase|
           G subunit 2) (Vacuolar proton pump G subunit 2)
          Length = 106

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 38/57 (66%), Positives = 44/57 (77%)
 Frame = -2

Query: 335 EADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVXXVKN 165
           E  FQRKL  TSGDSGANVKRLEQET+ KIEQLK +A  IS +V+ MLL++V  V N
Sbjct: 50  EQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106



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>VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14) (V-ATPase G|
           subunit) (Vacuolar proton pump G subunit)
          Length = 110

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 38/59 (64%), Positives = 44/59 (74%)
 Frame = -2

Query: 341 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVXXVKN 165
           Q+E +FQRKL E+ GDSGANVKRLEQET VKI  LK  A  I  +V+QM L+HV  VKN
Sbjct: 52  QVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110



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>OR83A_DROME (Q9VNB3) Putative odorant receptor 83a|
          Length = 453

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +3

Query: 222 CCLLLELFNFYVCLLLKAFDICT-RVTAGLGELSLEISLHLRTV--LSYLSLRLFF 380
           C L  ELFN++V + +    ICT  +  G G+L   ++  ++T+  L  ++++L+F
Sbjct: 52  CDLTYELFNYFVSVHIAGLYICTIYINYGQGDLDFFVNCLIQTIIYLWTIAMKLYF 107



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>GCSH_MOUSE (Q91WK5) Glycine cleavage system H protein, mitochondrial precursor|
          Length = 170

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 315 LSLEISLHLRTVLSYLSLRLFFCFPKPC 398
           +SL++S  LR V   L   L FC P+PC
Sbjct: 1   MSLQVSRSLRVVAYSLRTALAFCSPRPC 28



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>Y603_HAEIN (P44773) Protein HI0603|
          Length = 230

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 341 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQM 195
           Q  A  Q+KLT     +GAN+       N ++ QL+Q        + Q+
Sbjct: 63  QQMAKIQQKLTALENQTGANLSSNNTNNNKRLTQLEQSLKTAQENIAQL 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,134,339
Number of Sequences: 219361
Number of extensions: 1116041
Number of successful extensions: 3016
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3016
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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