ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9n02 |
|---|---|
| Clone Library Name | barley_pub |
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +2 Query: 128 HTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 271 H Q H H H H+ ++P HQ+S HP A+ + A Q+ Sbjct: 302 HPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQ 349
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -2 Query: 377 RAGPLQPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRPELP 231 R+GPL P P R + R A PS S + + P P L P+ P Sbjct: 375 RSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRP 423
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +2 Query: 128 HTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 271 H Q H H H H+ ++P HQ+S HP A+ + A Q+ Sbjct: 147 HPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQ 194
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1734 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = -2 Query: 389 PRLRRAGPLQPRPQEGRRAAAHRRPEAV-RLAPSSS 285 P L R+GP P P EG A H +A+ L PS S Sbjct: 1537 PSLSRSGPTSPTPSEGCWKAQHLHTQALTALCPSFS 1572
>IRS1_DROME (Q9XTN2) Insulin receptor substrate 1 (Protein Chico) (dIRS)| Length = 968 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +2 Query: 101 KKLKMD---TVVHTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEE 229 +KLK+ T AT +P+H I T IS KW + S EE Sbjct: 663 EKLKLSDYQTAPPLTATAAPVHDLNKISTYNISAEKWREQPSRSEE 708
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -2 Query: 377 RAGPLQPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRPELP 231 R+GPL P P R + R A PS S + + P P L P+ P Sbjct: 365 RSGPLPPPPPINRNGSTARALPATPQLPSRSGMDSPRSGPRPPLPPDRP 413
>DOK2_HUMAN (O60496) Docking protein 2 (Downstream of tyrosine kinase 2)| (p56(dok-2)) Length = 412 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -2 Query: 380 RRAGPLQPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRP 240 + A P P+PQ A+ RP++ P S TP+PA RP Sbjct: 246 KNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPVPAPRP 292
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +1 Query: 130 HPGYSLPNSHTQAHTYPSDQLP 195 HP + +P SH Q YP Q+P Sbjct: 461 HPQFMVPPSHQQQQAYPPPQMP 482
>IBMP_FMVD (P09524) Inclusion body matrix protein (Viroplasmin)| Length = 512 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = -3 Query: 148 GDCSLGVYHGVHFQFFVSFFCVAHICLKR----RIRTEHSRPAQLSVY 17 G VY G + +FF + VA IC KR R R++ +S+Y Sbjct: 153 GQSWFAVYKGPNKEFFTEWEIVADICKKRQKSKRFRSKEQAEVSISLY 200
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -2 Query: 377 RAGPLQPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRPELP 231 R+GPL P P R + R A PS S + + P P L P+ P Sbjct: 359 RSGPLPPPPPINRNGSTARALPATPQLPSRSGMDSPRSGPRPPLPPDRP 407
>PEVR1_HUMAN (Q9HAB3) Porcine endogenous retrovirus A receptor 1 precursor| (PERV-A receptor 1) (Protein GPR172A) Length = 445 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = -2 Query: 392 QPRLRRAGPLQPRPQEGRRAAAHRRPEAVRLAPS-SSCIIHILATPLPALRPELPILQGV 216 + + + PLQ P + P+A +L + S+C++ +LA LP +Q Sbjct: 241 EEEVEESSPLQEPPSQAAGTTPGPDPKAYQLLSARSACLLGLLAATNALTNGVLPAVQSF 300 Query: 215 SC 210 SC Sbjct: 301 SC 302
>CLDND_MOUSE (Q9CQX5) Claudin domain-containing protein 1| Length = 253 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -2 Query: 278 IHILATPLPALRPELPILQ-GVSCFGAILGS*SEGYVCACVC 156 I +L T L + LP + G+ CFGA++G +CAC+C Sbjct: 129 IDLLRTYLWRCQFLLPFVSLGLMCFGALIG------LCACIC 164
>CLDND_HUMAN (Q9NY35) Claudin domain-containing protein 1 (Membrane protein| GENX-3745) Length = 253 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -2 Query: 278 IHILATPLPALRPELPILQ-GVSCFGAILGS*SEGYVCACVC 156 I +L T L + LP + G+ CFGA++G +CAC+C Sbjct: 129 IDLLRTYLWRCQFLLPFVSLGLMCFGALIG------LCACIC 164
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 28.1 bits (61), Expect = 5.3 Identities = 36/130 (27%), Positives = 47/130 (36%), Gaps = 24/130 (18%) Frame = -2 Query: 392 QPRLRRAGPLQPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRPE----LPIL 225 +P+L P P P AA P+A + P SC + P P PE +P Sbjct: 890 RPKLCPLPPACPLPGFVPVPAA---PQAGQCCPQYSCACNTSRCPAPVGCPEGARAIPTY 946 Query: 224 QGVSCF-------------------GAILGS*SEGYVC-ACVCELGRL*PGCVPRCPFSV 105 Q +C GA++ S +C C CEL PG P F V Sbjct: 947 QEGACCPVQNCSWTVCSINGTLYQPGAVVSS----SLCETCRCEL----PGGPPSDAFVV 998 Query: 104 FCFIFLCRTH 75 C +C TH Sbjct: 999 SCETQICNTH 1008
>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1| Length = 1561 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = +2 Query: 155 HIHKHIHTPRISYPKWHQSSSH--PEESAARGAEQAMA 262 H H H H P S+P+ Q+ +H P A+ GA A Sbjct: 59 HSHSHPHQPIPSHPQEQQAKNHCSPSHQASGGATAGAA 96
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/63 (26%), Positives = 25/63 (39%) Frame = +1 Query: 22 QKVEPACYVQFESSSLDICVRHKKMKQKTENGHRGTHPGYSLPNSHTQAHTYPSDQLPKM 201 +KV P+ ++ SSS +C R K + + PG S P P P Sbjct: 81 EKVLPSIPLRCHSSSSPVCPRRKPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPP 140 Query: 202 APK 210 AP+ Sbjct: 141 APR 143
>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein| Length = 437 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +1 Query: 130 HPGYSLPNSHTQAHTY 177 H YS P++HTQAHT+ Sbjct: 96 HNTYSTPHAHTQAHTH 111
>UVP1_ECOLI (P18957) Protein uvp1| Length = 198 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = +1 Query: 136 GYSLPNSHTQAHTYPSDQLPKMAPKQLTP*RIGSSG-RRAGNGVARI--CIMQEEDGASL 306 GY+ ++H Q T+ D+L K +Q+ +I G +RA NG + C+ +G +L Sbjct: 4 GYARKSTHLQDVTHQVDELTKAGCEQIYHEQISRGGSKRAKNGAPELENCLKALREGDTL 63
>ORAI1_RAT (Q5M848) Protein orai-1| Length = 304 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +2 Query: 179 PRISYPKWHQSSSHPEESAARGAEQAMAWQEYVLCKKKM 295 P +SYP W S S + QA++W++ L + K+ Sbjct: 49 PAVSYPDWIGQSYSEVMSLNEHSMQALSWRKLYLSRAKL 87
>ORAI1_MOUSE (Q8BWG9) Protein orai-1| Length = 304 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +2 Query: 179 PRISYPKWHQSSSHPEESAARGAEQAMAWQEYVLCKKKM 295 P +SYP W S S + QA++W++ L + K+ Sbjct: 50 PAVSYPDWIGQSYSEVMSLNEHSMQALSWRKLYLSRAKL 88
>GLAS_DROVI (Q24732) Protein glass| Length = 598 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +2 Query: 134 QATVS-PIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAM 259 QA++S +H H+ + +P S + QSS+HP + ++ +QA+ Sbjct: 179 QASLSYTVHPHQMLISPNGSQQQQSQSSTHPHQLQSQHMQQAL 221
>SKI_MOUSE (Q60698) Ski oncogene (C-ski)| Length = 725 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -2 Query: 380 RRAGPLQPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRPELPILQG 219 RRAG + + + A A P V A ++H LPA++P P+L G Sbjct: 38 RRAGQEAYKKESAKEAGAATVPAPVPTAAEPPPVLH-----LPAIQPPPPVLPG 86
>AFLR_ASPPA (P43651) Aflatoxin biosynthesis regulatory protein| Length = 444 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +1 Query: 130 HPGYSLPNSHTQAHTY 177 H YS P++HTQAHT+ Sbjct: 96 HNTYSTPHAHTQAHTH 111
>IL1B_CEREL (P51745) Interleukin-1 beta precursor (IL-1 beta)| Length = 266 Score = 27.3 bits (59), Expect = 9.0 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +2 Query: 185 ISYPKWHQSSSHPEE 229 + YP W+ S+SHPEE Sbjct: 228 VLYPNWYISTSHPEE 242
>ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked nuclear protein) (Heterochromatin protein 2) (HP1 alpha-interacting protein) (HP1-BP38 protein) Length = 2476 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +2 Query: 101 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 271 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2205 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2260 Query: 272 YVLCKK 289 Y KK Sbjct: 2261 YEAEKK 2266
>ZBP2_CHICK (Q8UVD9) Zipcode-binding protein 2| Length = 769 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = +2 Query: 188 SYPKWHQSSSHPEESAARGAEQAMAWQEY 274 +YP+W + H AA A+ AW Y Sbjct: 609 TYPQWQPPAPHDPSKAAAAADPNAAWAGY 637
>TEGU_HCMV (P07387) Tegument protein (67 kDa phosphorylated protein)| Length = 549 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 Query: 67 LDICVRHKKMKQKTENGHRGTHPGYSLPNSHTQAHTYPS 183 +D C K ++ + R T SLPN++TQ H +PS Sbjct: 334 IDRCEFVGKKRRCMMHNDRETGDCSSLPNANTQTHRFPS 372
>FUBP2_HUMAN (Q92945) Far upstream element-binding protein 2 (FUSE-binding| protein 2) (KH type splicing regulatory protein) (KSRP) (p75) Length = 707 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +2 Query: 188 SYPKWHQSSSH-PEESAARGAEQAMAWQEY 274 +YP+W + H P ++AA A+ AW Y Sbjct: 548 TYPQWQPPAPHDPSKAAAAAADPNAAWAAY 577
>RL32_METKA (Q8TW13) 50S ribosomal protein L32e| Length = 131 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +1 Query: 82 RHKKMKQKTENGHRGTHPGYSLPNSHTQAHTYPSDQLPKMAPKQL 216 RH KM++K ++ + +PGY P H +++ PK L Sbjct: 49 RHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDL 93
>HEY1_CANFA (Q9TSZ2) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy| and enhancer of split related 1) (HESR-1) Length = 304 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/58 (36%), Positives = 27/58 (46%) Frame = -2 Query: 374 AGPLQPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRPELPILQGVSCFGA 201 A P P Q GR AAAH A+R AP S + +L A + P+L V+ A Sbjct: 208 ASPTDPHHQ-GRLAAAHPEAPALR-APPSGGLGPVLPVVTSASKLSPPLLSSVASLSA 263
>FLGH_BURPS (Q63YB2) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 240 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = -2 Query: 359 PRPQEGRRAAAHRRPEAVRLAPSSSCII--------HILATPLPALRPELPILQ 222 P+P RAAA RRP A LA ++ + I P+ A+ P P +Q Sbjct: 8 PQPARRARAAAARRPGAAALAAAALALAGCAQIPREPITQQPMSAMPPMPPAMQ 61
>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +2 Query: 101 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 271 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 272 YVLCKK 289 Y KK Sbjct: 2278 YEAEKK 2283
>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +2 Query: 101 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 271 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 272 YVLCKK 289 Y KK Sbjct: 2278 YEAEKK 2283
>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX) Length = 2492 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +2 Query: 101 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 271 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 272 YVLCKK 289 Y KK Sbjct: 2278 YEAEKK 2283 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,846,842 Number of Sequences: 219361 Number of extensions: 1411820 Number of successful extensions: 4139 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3950 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4136 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
