Clone Name | rbags9o03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 Score = 313 bits (158), Expect = 4e-82 Identities = 385/458 (84%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 220 tcttacaggctcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 279 |||||||||||||| |||| |||||||||||||| || |||||||| ||||||| |||| Sbjct: 2041 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 1982 Query: 280 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 339 ||||| |||||||| || || ||||| ||||||||||| || | |||||| ||| Sbjct: 1981 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 1922 Query: 340 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 399 ||||||||||| |||||||| || ||||| || ||||||| ||||| ||||| || ||| Sbjct: 1921 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 1862 Query: 400 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 459 ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| Sbjct: 1861 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 1802 Query: 460 acaaatgacacaacgcggacggtcttcccctccttcgtcaactcttcggcagccttcaca 519 ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| | Sbjct: 1801 acaaatgacacgacacggacagtcttcccctccttcctcaactcatcagcagccttggcg 1742 Query: 520 gcaatctctacttcagaaccagtgctcattatgatgtagtcaggcttgtttccacttcga 579 ||||||||| |||||| ||||||||||| | ||| ||||||||||||| ||| || || Sbjct: 1741 acaatctctagttcagagccagtgctcatcacaatgaagtcaggcttgttgccagtt-ga 1683 Query: 580 gttgtcggagatggtgtatccacccttcgcaacaccctcaatttgaggtaccaggcagat 639 |||||| |||| | |||| ||||||||| |||||||||||| | |||||||||||||| | Sbjct: 1682 gttgtcagagacgatgtacccacccttctcaacaccctcaa-tcgaggtaccaggcagct 1624 Query: 640 gaggaagcttttgccttgagagagccagaatggatggc 677 ||| |||||||||||| |||||||| || | ||||||| Sbjct: 1623 gagcaagcttttgcctggagagagcaaggacggatggc 1586 Score = 87.7 bits (44), Expect = 4e-14 Identities = 100/114 (87%), Gaps = 6/114 (5%) Strand = Plus / Minus Query: 49 aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 108 |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | | Sbjct: 2212 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 2155 Query: 109 caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 162 |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| Sbjct: 2154 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 2105
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 313 bits (158), Expect = 4e-82 Identities = 385/458 (84%), Gaps = 2/458 (0%) Strand = Plus / Plus Query: 220 tcttacaggctcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 279 |||||||||||||| |||| |||||||||||||| || |||||||| ||||||| |||| Sbjct: 128493 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 128552 Query: 280 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 339 ||||| |||||||| || || ||||| ||||||||||| || | |||||| ||| Sbjct: 128553 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 128612 Query: 340 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 399 ||||||||||| |||||||| || ||||| || ||||||| ||||| ||||| || ||| Sbjct: 128613 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 128672 Query: 400 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 459 ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| Sbjct: 128673 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 128732 Query: 460 acaaatgacacaacgcggacggtcttcccctccttcgtcaactcttcggcagccttcaca 519 ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| | Sbjct: 128733 acaaatgacacgacacggacagtcttcccctccttcctcaactcatcagcagccttggcg 128792 Query: 520 gcaatctctacttcagaaccagtgctcattatgatgtagtcaggcttgtttccacttcga 579 ||||||||| |||||| ||||||||||| | ||| ||||||||||||| ||| || || Sbjct: 128793 acaatctctagttcagagccagtgctcatcacaatgaagtcaggcttgttgccagtt-ga 128851 Query: 580 gttgtcggagatggtgtatccacccttcgcaacaccctcaatttgaggtaccaggcagat 639 |||||| |||| | |||| ||||||||| |||||||||||| | |||||||||||||| | Sbjct: 128852 gttgtcagagacgatgtacccacccttctcaacaccctcaa-tcgaggtaccaggcagct 128910 Query: 640 gaggaagcttttgccttgagagagccagaatggatggc 677 ||| |||||||||||| |||||||| || | ||||||| Sbjct: 128911 gagcaagcttttgcctggagagagcaaggacggatggc 128948 Score = 87.7 bits (44), Expect = 4e-14 Identities = 100/114 (87%), Gaps = 6/114 (5%) Strand = Plus / Plus Query: 49 aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 108 |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | | Sbjct: 128322 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 128379 Query: 109 caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 162 |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| Sbjct: 128380 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 128429
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 313 bits (158), Expect = 4e-82 Identities = 385/458 (84%), Gaps = 2/458 (0%) Strand = Plus / Plus Query: 220 tcttacaggctcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 279 |||||||||||||| |||| |||||||||||||| || |||||||| ||||||| |||| Sbjct: 1808201 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 1808260 Query: 280 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 339 ||||| |||||||| || || ||||| ||||||||||| || | |||||| ||| Sbjct: 1808261 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 1808320 Query: 340 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 399 ||||||||||| |||||||| || ||||| || ||||||| ||||| ||||| || ||| Sbjct: 1808321 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 1808380 Query: 400 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 459 ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| Sbjct: 1808381 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 1808440 Query: 460 acaaatgacacaacgcggacggtcttcccctccttcgtcaactcttcggcagccttcaca 519 ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| | Sbjct: 1808441 acaaatgacacgacacggacagtcttcccctccttcctcaactcatcagcagccttggcg 1808500 Query: 520 gcaatctctacttcagaaccagtgctcattatgatgtagtcaggcttgtttccacttcga 579 ||||||||| |||||| ||||||||||| | ||| ||||||||||||| ||| || || Sbjct: 1808501 acaatctctagttcagagccagtgctcatcacaatgaagtcaggcttgttgccagtt-ga 1808559 Query: 580 gttgtcggagatggtgtatccacccttcgcaacaccctcaatttgaggtaccaggcagat 639 |||||| |||| | |||| ||||||||| |||||||||||| | |||||||||||||| | Sbjct: 1808560 gttgtcagagacgatgtacccacccttctcaacaccctcaa-tcgaggtaccaggcagct 1808618 Query: 640 gaggaagcttttgccttgagagagccagaatggatggc 677 ||| |||||||||||| |||||||| || | ||||||| Sbjct: 1808619 gagcaagcttttgcctggagagagcaaggacggatggc 1808656 Score = 87.7 bits (44), Expect = 4e-14 Identities = 100/114 (87%), Gaps = 6/114 (5%) Strand = Plus / Plus Query: 49 aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 108 |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | | Sbjct: 1808030 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 1808087 Query: 109 caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 162 |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| Sbjct: 1808088 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 1808137
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 313 bits (158), Expect = 4e-82 Identities = 385/458 (84%), Gaps = 2/458 (0%) Strand = Plus / Plus Query: 220 tcttacaggctcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 279 |||||||||||||| |||| |||||||||||||| || |||||||| ||||||| |||| Sbjct: 8679 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 8738 Query: 280 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 339 ||||| |||||||| || || ||||| ||||||||||| || | |||||| ||| Sbjct: 8739 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 8798 Query: 340 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 399 ||||||||||| |||||||| || ||||| || ||||||| ||||| ||||| || ||| Sbjct: 8799 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 8858 Query: 400 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 459 ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| Sbjct: 8859 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 8918 Query: 460 acaaatgacacaacgcggacggtcttcccctccttcgtcaactcttcggcagccttcaca 519 ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| | Sbjct: 8919 acaaatgacacgacacggacagtcttcccctccttcctcaactcatcagcagccttggcg 8978 Query: 520 gcaatctctacttcagaaccagtgctcattatgatgtagtcaggcttgtttccacttcga 579 ||||||||| |||||| ||||||||||| | ||| ||||||||||||| ||| || || Sbjct: 8979 acaatctctagttcagagccagtgctcatcacaatgaagtcaggcttgttgccagtt-ga 9037 Query: 580 gttgtcggagatggtgtatccacccttcgcaacaccctcaatttgaggtaccaggcagat 639 |||||| |||| | |||| ||||||||| |||||||||||| | |||||||||||||| | Sbjct: 9038 gttgtcagagacgatgtacccacccttctcaacaccctcaa-tcgaggtaccaggcagct 9096 Query: 640 gaggaagcttttgccttgagagagccagaatggatggc 677 ||| |||||||||||| |||||||| || | ||||||| Sbjct: 9097 gagcaagcttttgcctggagagagcaaggacggatggc 9134 Score = 87.7 bits (44), Expect = 4e-14 Identities = 100/114 (87%), Gaps = 6/114 (5%) Strand = Plus / Plus Query: 49 aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 108 |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | | Sbjct: 8508 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 8565 Query: 109 caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 162 |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| Sbjct: 8566 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 8615
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 313 bits (158), Expect = 4e-82 Identities = 385/458 (84%), Gaps = 2/458 (0%) Strand = Plus / Plus Query: 220 tcttacaggctcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 279 |||||||||||||| |||| |||||||||||||| || |||||||| ||||||| |||| Sbjct: 133350 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 133409 Query: 280 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 339 ||||| |||||||| || || ||||| ||||||||||| || | |||||| ||| Sbjct: 133410 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 133469 Query: 340 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 399 ||||||||||| |||||||| || ||||| || ||||||| ||||| ||||| || ||| Sbjct: 133470 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 133529 Query: 400 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 459 ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| Sbjct: 133530 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 133589 Query: 460 acaaatgacacaacgcggacggtcttcccctccttcgtcaactcttcggcagccttcaca 519 ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| | Sbjct: 133590 acaaatgacacgacacggacagtcttcccctccttcctcaactcatcagcagccttggcg 133649 Query: 520 gcaatctctacttcagaaccagtgctcattatgatgtagtcaggcttgtttccacttcga 579 ||||||||| |||||| ||||||||||| | ||| ||||||||||||| ||| || || Sbjct: 133650 acaatctctagttcagagccagtgctcatcacaatgaagtcaggcttgttgccagtt-ga 133708 Query: 580 gttgtcggagatggtgtatccacccttcgcaacaccctcaatttgaggtaccaggcagat 639 |||||| |||| | |||| ||||||||| |||||||||||| | |||||||||||||| | Sbjct: 133709 gttgtcagagacgatgtacccacccttctcaacaccctcaa-tcgaggtaccaggcagct 133767 Query: 640 gaggaagcttttgccttgagagagccagaatggatggc 677 ||| |||||||||||| |||||||| || | ||||||| Sbjct: 133768 gagcaagcttttgcctggagagagcaaggacggatggc 133805 Score = 87.7 bits (44), Expect = 4e-14 Identities = 100/114 (87%), Gaps = 6/114 (5%) Strand = Plus / Plus Query: 49 aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 108 |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | | Sbjct: 133179 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 133236 Query: 109 caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 162 |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| Sbjct: 133237 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 133286
>dbj|AK119542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D07, full insert sequence Length = 1104 Score = 313 bits (158), Expect = 4e-82 Identities = 385/458 (84%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 220 tcttacaggctcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 279 |||||||||||||| |||| |||||||||||||| || |||||||| ||||||| |||| Sbjct: 884 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 825 Query: 280 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 339 ||||| |||||||| || || ||||| ||||||||||| || | |||||| ||| Sbjct: 824 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 765 Query: 340 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 399 ||||||||||| |||||||| || ||||| || ||||||| ||||| ||||| || ||| Sbjct: 764 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 705 Query: 400 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 459 ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| Sbjct: 704 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 645 Query: 460 acaaatgacacaacgcggacggtcttcccctccttcgtcaactcttcggcagccttcaca 519 ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| | Sbjct: 644 acaaatgacacgacacggacagtcttcccctccttcctcaactcatcagcagccttggcg 585 Query: 520 gcaatctctacttcagaaccagtgctcattatgatgtagtcaggcttgtttccacttcga 579 ||||||||| |||||| ||||||||||| | ||| ||||||||||||| ||| || || Sbjct: 584 acaatctctagttcagagccagtgctcatcacaatgaagtcaggcttgttgccagtt-ga 526 Query: 580 gttgtcggagatggtgtatccacccttcgcaacaccctcaatttgaggtaccaggcagat 639 |||||| |||| | |||| ||||||||| |||||||||||| | |||||||||||||| | Sbjct: 525 gttgtcagagacgatgtacccacccttctcaacaccctcaa-tcgaggtaccaggcagct 467 Query: 640 gaggaagcttttgccttgagagagccagaatggatggc 677 ||| |||||||||||| |||||||| || | ||||||| Sbjct: 466 gagcaagcttttgcctggagagagcaaggacggatggc 429 Score = 87.7 bits (44), Expect = 4e-14 Identities = 100/114 (87%), Gaps = 6/114 (5%) Strand = Plus / Minus Query: 49 aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 108 |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | | Sbjct: 1055 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 998 Query: 109 caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 162 |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| Sbjct: 997 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 948
>dbj|AK105053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E06, full insert sequence Length = 2001 Score = 313 bits (158), Expect = 4e-82 Identities = 385/458 (84%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 220 tcttacaggctcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 279 |||||||||||||| |||| |||||||||||||| || |||||||| ||||||| |||| Sbjct: 1719 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 1660 Query: 280 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 339 ||||| |||||||| || || ||||| ||||||||||| || | |||||| ||| Sbjct: 1659 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 1600 Query: 340 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 399 ||||||||||| |||||||| || ||||| || ||||||| ||||| ||||| || ||| Sbjct: 1599 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 1540 Query: 400 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 459 ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| Sbjct: 1539 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 1480 Query: 460 acaaatgacacaacgcggacggtcttcccctccttcgtcaactcttcggcagccttcaca 519 ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| | Sbjct: 1479 acaaatgacacgacacggacagtcttcccctccttcctcaactcatcagcagccttggcg 1420 Query: 520 gcaatctctacttcagaaccagtgctcattatgatgtagtcaggcttgtttccacttcga 579 ||||||||| |||||| ||||||||||| | ||| ||||||||||||| ||| || || Sbjct: 1419 acaatctctagttcagagccagtgctcatcacaatgaagtcaggcttgttgccagtt-ga 1361 Query: 580 gttgtcggagatggtgtatccacccttcgcaacaccctcaatttgaggtaccaggcagat 639 |||||| |||| | |||| ||||||||| |||||||||||| | |||||||||||||| | Sbjct: 1360 gttgtcagagacgatgtacccacccttctcaacaccctcaa-tcgaggtaccaggcagct 1302 Query: 640 gaggaagcttttgccttgagagagccagaatggatggc 677 ||| |||||||||||| |||||||| || | ||||||| Sbjct: 1301 gagcaagcttttgcctggagagagcaaggacggatggc 1264 Score = 87.7 bits (44), Expect = 4e-14 Identities = 100/114 (87%), Gaps = 6/114 (5%) Strand = Plus / Minus Query: 49 aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 108 |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | | Sbjct: 1890 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 1833 Query: 109 caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 162 |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| Sbjct: 1832 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 1783
>dbj|AK067452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D17, full insert sequence Length = 2280 Score = 313 bits (158), Expect = 4e-82 Identities = 385/458 (84%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 220 tcttacaggctcttggctgcggcgatgacgttctctgcagtgatgccgtactccttgtag 279 |||||||||||||| |||| |||||||||||||| || |||||||| ||||||| |||| Sbjct: 2040 tcttacaggctctttgctgttgcgatgacgttctccgcggtgatgccatactcctggtag 1981 Query: 280 atcttgggggcaggagcgctggcgccgaacttgtcgatgccgatggtcttgcccttggac 339 ||||| |||||||| || || ||||| ||||||||||| || | |||||| ||| Sbjct: 1980 atctttccagcaggagcacttgcaccgaatttgtcgatgccaatagccttgcctttgctt 1921 Query: 340 ccgacgtacttttgccatccgagggtagagccagcttcaatgctgatccttgcggtgaca 399 ||||||||||| |||||||| || ||||| || ||||||| ||||| ||||| || ||| Sbjct: 1920 ccgacgtacttctgccatccaagagtagaccctgcttcaaggctgactcttgcagtaaca 1861 Query: 400 gcctcagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagcag 459 ||||||||||| || ||||||||||| ||| | ||||| || || |||||||||||||| Sbjct: 1860 gcctcagggagaacactctccttgtactcagccgactgttcatcgaaaagctcccagcaa 1801 Query: 460 acaaatgacacaacgcggacggtcttcccctccttcgtcaactcttcggcagccttcaca 519 ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||| | Sbjct: 1800 acaaatgacacgacacggacagtcttcccctccttcctcaactcatcagcagccttggcg 1741 Query: 520 gcaatctctacttcagaaccagtgctcattatgatgtagtcaggcttgtttccacttcga 579 ||||||||| |||||| ||||||||||| | ||| ||||||||||||| ||| || || Sbjct: 1740 acaatctctagttcagagccagtgctcatcacaatgaagtcaggcttgttgccagtt-ga 1682 Query: 580 gttgtcggagatggtgtatccacccttcgcaacaccctcaatttgaggtaccaggcagat 639 |||||| |||| | |||| ||||||||| |||||||||||| | |||||||||||||| | Sbjct: 1681 gttgtcagagacgatgtacccacccttctcaacaccctcaa-tcgaggtaccaggcagct 1623 Query: 640 gaggaagcttttgccttgagagagccagaatggatggc 677 ||| |||||||||||| |||||||| || | ||||||| Sbjct: 1622 gagcaagcttttgcctggagagagcaaggacggatggc 1585 Score = 87.7 bits (44), Expect = 4e-14 Identities = 100/114 (87%), Gaps = 6/114 (5%) Strand = Plus / Minus Query: 49 aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 108 |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | | Sbjct: 2211 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 2154 Query: 109 caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 162 |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| Sbjct: 2153 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 2104
>gb|BT016698.1| Zea mays clone Contig531 mRNA sequence Length = 1691 Score = 228 bits (115), Expect = 2e-56 Identities = 342/415 (82%), Gaps = 2/415 (0%) Strand = Plus / Minus Query: 259 gtgatgccgtactccttgtagatcttgggggcaggagcgctggcgccgaacttgtcgatg 318 |||||||||||||||||||||||| | ||||||||| || |||||||||||||||||| Sbjct: 1195 gtgatgccgtactccttgtagatcgtcccggcaggagcactcgcgccgaacttgtcgatg 1136 Query: 319 ccgatggtcttgcccttggacccgacgtacttttgccatccgagggtagagccagcttca 378 || |||| |||||||| || ||||||||||| ||||| || || || || ||||| ||| Sbjct: 1135 ccaatggccttgccctgggctccgacgtacttctgccagccaagagtggacccagcctca 1076 Query: 379 atgctgatccttgcggtgacagcctcagggagcacgctctccttgtattcatcggactgc 438 ||||||||||| || ||||| || ||||||| |||||||||||||| ||||| |||||| Sbjct: 1075 atgctgatcctcgctgtgacggcagcagggaggacgctctccttgtactcatccgactgc 1016 Query: 439 tcgtcaaaaagctcccagcagacaaatgacacaacgcggacggtcttcccctccttcgtc 498 || ||||| || |||||| |||| || || || |||||||| ||||| ||||||||| || Sbjct: 1015 tcatcaaagagttcccaggagacgaacgagacgacgcggaccgtcttgccctccttcctc 956 Query: 499 aactcttcggcagccttcacagcaatctctacttcagaaccagtgctcattatgatgtag 558 | ||| ||||| ||||| | || ||||| | || || || |||| ||| | ||| | Sbjct: 955 agctcgtcggcggccttggccgcgatctccagctcggagccggtgcccatcacaatgagg 896 Query: 559 tcaggcttgtttccacttcgagttgtcggagatggtgtatccacccttcgcaacaccctc 618 ||||||||||| ||| |||||||||||||||||||||| || |||||| | || ||||| Sbjct: 895 tcaggcttgttgcca-gtcgagttgtcggagatggtgtacccgcccttctccacgccctc 837 Query: 619 aatttgaggtaccaggcagatgaggaagcttttgccttgagagagccagaatgga 673 | | ||||| |||||||| ||||| ||||||||||| |||||||| || ||||| Sbjct: 836 ga-tcgaggtgccaggcaggtgagggagcttttgcctggagagagcgaggatgga 783 Score = 69.9 bits (35), Expect = 1e-08 Identities = 45/47 (95%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 47 acaacgcaaatggaaaa-ggcattgtttattacaggcctagaaatac 92 |||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 1427 acaacgtaaatggaaaaaggcattgtttattacaggcctagaaatac 1381
>gb|AY148193.1| Synthetic construct thioredoxin/transketolase fusion protein gene, complete cds Length = 2415 Score = 220 bits (111), Expect = 5e-54 Identities = 341/415 (82%), Gaps = 2/415 (0%) Strand = Plus / Minus Query: 259 gtgatgccgtactccttgtagatcttgggggcaggagcgctggcgccgaacttgtcgatg 318 |||||||||||||||||||||||| | ||||||||| || |||||||||||||||||| Sbjct: 2378 gtgatgccgtactccttgtagatcgtcccggcaggagcactcgcgccgaacttgtcgatg 2319 Query: 319 ccgatggtcttgcccttggacccgacgtacttttgccatccgagggtagagccagcttca 378 || |||| |||||||| || ||||||||||| ||||| ||||| || || || || || Sbjct: 2318 ccaatggccttgccctgggctccgacgtacttctgccagccgagagtggacccggcctcg 2259 Query: 379 atgctgatccttgcggtgacagcctcagggagcacgctctccttgtattcatcggactgc 438 ||||||||||| || ||||| || ||||||| |||||||||||||| ||||| |||||| Sbjct: 2258 atgctgatcctcgctgtgacggcggcagggaggacgctctccttgtactcatccgactgc 2199 Query: 439 tcgtcaaaaagctcccagcagacaaatgacacaacgcggacggtcttcccctccttcgtc 498 || ||||| || |||||| |||| || || || |||||||| ||||||||||||||| || Sbjct: 2198 tcatcaaagagttcccaggagacgaacgagacgacgcggaccgtcttcccctccttcctc 2139 Query: 499 aactcttcggcagccttcacagcaatctctacttcagaaccagtgctcattatgatgtag 558 | ||| ||||| ||||| | || ||||| | || || || |||| ||| | ||| | Sbjct: 2138 agctcgtcggcggccttggccgcgatctccagctcggagccggtgcccatcacaatgagg 2079 Query: 559 tcaggcttgtttccacttcgagttgtcggagatggtgtatccacccttcgcaacaccctc 618 ||||||||||| || |||||||||||||||||||||| || |||||| | || ||||| Sbjct: 2078 tcaggcttgttgcc-ggtcgagttgtcggagatggtgtacccgcccttctccacgccctc 2020 Query: 619 aatttgaggtaccaggcagatgaggaagcttttgccttgagagagccagaatgga 673 | | ||||| |||||||| ||||| ||||||||||| |||||||| || ||||| Sbjct: 2019 ga-tcgaggtgccaggcaggtgagggagcttttgcctagagagagcgaggatgga 1966
>dbj|AB066206.1| Polygonum tinctorium mRNA for transketolase, complete cds Length = 2065 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacac 470 ||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 1681 ctctccttgtactcatcagactgctcctcaaacagctcccagcacacaaatgacac 1626
>gb|AC146329.19| Medicago truncatula clone mth2-5i21, complete sequence Length = 142834 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 404 cagggagcacgctctccttgtattcatcggactgctcgtcaaaaagctcccagc 457 ||||||| || ||||||||||||||||| ||||| || |||||||| ||||||| Sbjct: 40859 cagggagaacactctccttgtattcatctgactgatcatcaaaaagttcccagc 40912
>ref|NM_115939.2| Arabidopsis thaliana transketolase AT3G60750 mRNA, complete cds Length = 2839 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 2315 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2272
>gb|AY133860.1| Arabidopsis thaliana clone U19695 putative transketolase (At3g60750) mRNA, complete cds Length = 2257 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 2030 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 1987
>gb|AY091094.1| Arabidopsis thaliana putative transketolase (At3g60750) mRNA, complete cds Length = 2611 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 2111 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2068
>gb|AF424631.1|AF424631 Arabidopsis thaliana AT3g60750/T4C21_160 mRNA, complete cds Length = 2528 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 2110 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2067
>emb|BX825521.1|CNS0A7MT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 796 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 473 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 430
>emb|BX824324.1|CNS0A5SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH3ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 796 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 473 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 430
>gb|BT003331.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 2561 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 2111 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2068
>gb|AY085542.1| Arabidopsis thaliana clone 15659 mRNA, complete sequence Length = 2614 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 2167 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 2124
>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21 Length = 107865 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 415 ctctccttgtattcatcggactgctcgtcaaaaagctcccagca 458 ||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 57886 ctctccttgtattcatctgattgctcgtcaaatagttcccagca 57843
>ref|NM_130092.2| Arabidopsis thaliana transketolase AT2G45290 mRNA, complete cds Length = 2598 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 418 tccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacacaac 473 ||||||||| |||| || |||||||| ||||||||||| || ||||| || ||||| Sbjct: 2082 tccttgtatgcatctgattgctcgtcgaaaagctcccaacatacaaaggaaacaac 2027
>gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map CIC02E07, complete sequence Length = 122928 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 418 tccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacacaac 473 ||||||||| |||| || |||||||| ||||||||||| || ||||| || ||||| Sbjct: 72548 tccttgtatgcatctgattgctcgtcgaaaagctcccaacatacaaaggaaacaac 72603
>gb|AY078964.1| Arabidopsis thaliana At2g45290/F4L23.20 mRNA, complete sequence Length = 2581 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 418 tccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacacaac 473 ||||||||| |||| || |||||||| ||||||||||| || ||||| || ||||| Sbjct: 2067 tccttgtatgcatctgattgctcgtcgaaaagctcccaacatacaaaggaaacaac 2012
>gb|AY057528.1| Arabidopsis thaliana At2g45290/F4L23.20 mRNA, complete cds Length = 2206 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 418 tccttgtattcatcggactgctcgtcaaaaagctcccagcagacaaatgacacaac 473 ||||||||| |||| || |||||||| ||||||||||| || ||||| || ||||| Sbjct: 1868 tccttgtatgcatctgattgctcgtcgaaaagctcccaacatacaaaggaaacaac 1813
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 caaaaagctcccagcagacaaat 465 ||||||||||||||||||||||| Sbjct: 1510792 caaaaagctcccagcagacaaat 1510814
>emb|AJ862835.1| Lolium perenne partial lolp4 gene for pollen allergen Lol p 4 Length = 1272 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 242 cgatgacgttctctgcagtgatgccgtact 271 |||||||||||||||| | ||||||||||| Sbjct: 338 cgatgacgttctctgcggcgatgccgtact 309
>ref|XM_765191.1| Giardia lamblia ATCC 50803 glyceraldehyde 3-phosphate dehydrogenase (GLP_80_19533_18523) partial mRNA Length = 1011 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 330 gcccttggacccgacgtacttt 351 |||||||||||||||||||||| Sbjct: 1005 gcccttggacccgacgtacttt 984
>emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chromosome 9 Contains the 3' end of a novel gene (FLJ11985, MGC11337) (KIAA0870), the ORM1 gene for orosomucoid 1 (AGP1, AGP-A), the ORM2 gene for orosomucoid 2 (AGP2, AGP-B) and the gene for AT-hook transcription factor AKNA, complete sequence Length = 125673 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 215 gctggtcttacaggctcttggctgcg 240 |||||||||||||| ||||||||||| Sbjct: 39266 gctggtcttacaggttcttggctgcg 39241
>dbj|AK220725.1| Arabidopsis thaliana mRNA for putative transketolase precursor, partial cds, clone: RAFL22-06-F18 Length = 406 Score = 44.1 bits (22), Expect = 0.59 Identities = 34/38 (89%) Strand = Plus / Minus Query: 418 tccttgtattcatcggactgctcgtcaaaaagctccca 455 ||||||||| |||| || |||||||| ||||||||||| Sbjct: 42 tccttgtatgcatctgattgctcgtcgaaaagctccca 5
>gb|M88062.1|GIAGLYALPH Giardia intestinalis glyceraldehyde 3-phosphate dehydrogenase (gap1) gene, complete cds Length = 1178 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 330 gcccttggacccgacgtacttt 351 |||||||||||||||||||||| Sbjct: 1161 gcccttggacccgacgtacttt 1140
>ref|XM_322348.1| Neurospora crassa OR74A hypothetical protein (NCU00263.1) partial mRNA Length = 2631 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 gccgatggtcttgcccttgga 338 ||||||||||||||||||||| Sbjct: 2403 gccgatggtcttgcccttgga 2383
>ref|XM_952641.1| Neurospora crassa OR74A hypothetical protein (NCU00263.1) partial mRNA Length = 2631 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 gccgatggtcttgcccttgga 338 ||||||||||||||||||||| Sbjct: 2403 gccgatggtcttgcccttgga 2383
>gb|AE009185.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 211 of 256 of the complete sequence Length = 12100 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 atgccgatggtcttgcccttg 336 ||||||||||||||||||||| Sbjct: 4337 atgccgatggtcttgcccttg 4357
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ctctgcagtgatgccgtactc 272 ||||||||||||||||||||| Sbjct: 330738 ctctgcagtgatgccgtactc 330758
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 gatgccgatggtcttgccctt 335 ||||||||||||||||||||| Sbjct: 171928 gatgccgatggtcttgccctt 171908
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 atgccgatggtcttgcccttg 336 ||||||||||||||||||||| Sbjct: 2340060 atgccgatggtcttgcccttg 2340080
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 gcgccgaacttgtcgatgccgatgg 325 ||||||||| ||||||||||||||| Sbjct: 2085843 gcgccgaacgtgtcgatgccgatgg 2085867
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 ggcgatgacgttctctgcagtgatgccg 267 ||||||||||| ||| |||||||||||| Sbjct: 119991 ggcgatgacgtactcagcagtgatgccg 120018
>ref|XM_708917.1| Candida albicans SC5314 mannosyltransferase (CaO19.9883), mRNA Length = 1794 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 agtcaggcttgtttccactt 576 |||||||||||||||||||| Sbjct: 271 agtcaggcttgtttccactt 252
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 gtcgatgccgatggtcttgccctt 335 ||||| |||||||||||||||||| Sbjct: 3108742 gtcgacgccgatggtcttgccctt 3108765
>emb|CT009527.5| Mouse DNA sequence from clone RP23-25D11 on chromosome 13, complete sequence Length = 226804 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 caatctctacttcagaacca 540 |||||||||||||||||||| Sbjct: 32646 caatctctacttcagaacca 32627
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 atgccgatggtcttgccctt 335 |||||||||||||||||||| Sbjct: 1345343 atgccgatggtcttgccctt 1345324
>ref|XM_784712.1| PREDICTED: Strongylocentrotus purpuratus similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (LOC584867), partial mRNA Length = 1545 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 catcctcctctccctccgtt 132 |||||||||||||||||||| Sbjct: 585 catcctcctctccctccgtt 566
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 aaaaggcattgtttattacaggcc 83 |||||||||||||||| ||||||| Sbjct: 1831511 aaaaggcattgtttataacaggcc 1831488
>gb|AC126122.2| Homo sapiens chromosome 3 clone RP11-751K5, complete sequence Length = 3917 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ttccaagctttctgggcacg 153 |||||||||||||||||||| Sbjct: 2973 ttccaagctttctgggcacg 2954
>gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, complete sequence Length = 192063 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ttccaagctttctgggcacg 153 |||||||||||||||||||| Sbjct: 830 ttccaagctttctgggcacg 811
>gb|AC010621.7| Homo sapiens chromosome 5 clone CTD-2034J20, complete sequence Length = 52368 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 attgtttattacaggcctagaaat 90 |||||||||||||| ||||||||| Sbjct: 36359 attgtttattacagccctagaaat 36382
>gb|AF400075.1|AF400075 Homo sapiens coagulation factor II (thrombin) receptor-like 1 (F2RL1) gene, complete cds Length = 18351 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 attgtttattacaggcctagaaat 90 |||||||||||||| ||||||||| Sbjct: 8934 attgtttattacagccctagaaat 8957
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cgaacttgtcgatgccgatg 324 |||||||||||||||||||| Sbjct: 2234310 cgaacttgtcgatgccgatg 2234329
>dbj|AK110336.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-E12, full insert sequence Length = 2492 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 289 gcaggagcgctggcgccgaacttgtcgatgcc 320 ||||| |||||||||||||| | ||||||||| Sbjct: 2107 gcaggtgcgctggcgccgaaatcgtcgatgcc 2076
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 tgccgatggtcttgcccttg 336 |||||||||||||||||||| Sbjct: 5534504 tgccgatggtcttgcccttg 5534485
>emb|AL161747.5|CNS01RHF Human chromosome 14 DNA sequence BAC R-689J19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170588 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tcctcctctccctccgttat 134 |||||||||||||||||||| Sbjct: 25608 tcctcctctccctccgttat 25589
>gb|AC159644.3| Mus musculus BAC clone RP23-358A18 from chromosome 12, complete sequence Length = 196310 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgtagtcaggcttgtttcca 573 |||||||||||||||||||| Sbjct: 113862 tgtagtcaggcttgtttcca 113881
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 654 cttgagagagccagaatgga 673 |||||||||||||||||||| Sbjct: 2625806 cttgagagagccagaatgga 2625787
>gb|AC114962.2| Homo sapiens chromosome 5 clone RP11-206N2, complete sequence Length = 107278 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 attgtttattacaggcctagaaat 90 |||||||||||||| ||||||||| Sbjct: 94759 attgtttattacagccctagaaat 94736 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,066,502 Number of Sequences: 3902068 Number of extensions: 5066502 Number of successful extensions: 94517 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94111 Number of HSP's gapped (non-prelim): 364 length of query: 677 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 654 effective length of database: 17,143,297,704 effective search space: 11211716698416 effective search space used: 11211716698416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)