Clone Information

BLAST Search Result

Clone Name	rbags9o02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20	48	3e-05
2	RS20_PROMA (Q7VA27) 30S ribosomal protein S20	46	8e-05
3	RS20_SYNP6 (Q5MZ25) 30S ribosomal protein S20	45	1e-04
4	RS20_PROMM (Q7TUR7) 30S ribosomal protein S20	45	1e-04
5	RS20_SYNEL (Q8DJN4) 30S ribosomal protein S20	44	3e-04
6	RS20_ANASP (Q8YWL3) 30S ribosomal protein S20	44	4e-04
7	RS20_THET8 (P80380) 30S ribosomal protein S20	44	5e-04
8	RS20_THET2 (P62661) 30S ribosomal protein S20	44	5e-04
9	RR20_PORPU (P51253) Chloroplast 30S ribosomal protein S20	41	0.003
10	RS20_UREPA (Q9PQI1) 30S ribosomal protein S20	40	0.004
11	RS20_PROMT (Q46J20) 30S ribosomal protein S20	40	0.004
12	RS20_SYNY3 (P73336) 30S ribosomal protein S20	40	0.006
13	RS20_CARHZ (Q3AF17) 30S ribosomal protein S20	40	0.008
14	RS20_PROMP (Q7TU38) 30S ribosomal protein S20	39	0.013
15	RS20_BACSU (P21477) 30S ribosomal protein S20 (BS20)	39	0.013
16	RR20_GRATL (Q6B8R9) Chloroplast 30S ribosomal protein S20	39	0.017
17	RS20_THEMA (Q9X1Y7) 30S ribosomal protein S20	38	0.029
18	RS20_LEPIN (Q8EZQ3) 30S ribosomal protein S20	38	0.029
19	RS20_LEPIC (Q72V55) 30S ribosomal protein S20	38	0.029
20	RS20_GEOKA (Q5KWY9) 30S ribosomal protein S20	37	0.038
21	RS20_FUSNN (Q8RHW1) 30S ribosomal protein S20	37	0.038
22	RS20_GLOVI (Q7NP97) 30S ribosomal protein S20	37	0.064
23	RS20_PSEHT (Q3IEA5) 30S ribosomal protein S20	36	0.084
24	RS20_NEIMB (P66508) 30S ribosomal protein S20	36	0.084
25	RS20_NEIMA (P66507) 30S ribosomal protein S20	36	0.084
26	RS20_NEIG1 (Q5F6Q6) 30S ribosomal protein S20	36	0.084
27	RR20_ODOSI (P49507) Chloroplast 30S ribosomal protein S20	36	0.11
28	RS20_OCEIH (Q8EPW0) 30S ribosomal protein S20	35	0.14
29	RS20_MYCMO (Q6KHC4) 30S ribosomal protein S20	35	0.14
30	RS20_CLOPE (Q8XIS2) 30S ribosomal protein S20	35	0.14
31	RS20_CAUCR (P49400) 30S ribosomal protein S20	35	0.19
32	RS20_PHOPR (Q6LUL5) 30S ribosomal protein S20	35	0.24
33	RS20_METCA (Q605N0) 30S ribosomal protein S20	35	0.24
34	RS20_DEIRA (Q9RUS3) 30S ribosomal protein S20	34	0.42
35	RS20_COREF (Q8FNA1) 30S ribosomal protein S20	34	0.42
36	RS20_COLP3 (Q486U3) 30S ribosomal protein S20	34	0.42
37	RS20_SYMTH (Q67S82) 30S ribosomal protein S20	33	0.54
38	RS20_CORDI (Q6NFX0) 30S ribosomal protein S20	33	0.54
39	RS20_ANAMM (Q5P9I2) 30S ribosomal protein S20	33	0.54
40	RS20_MYCS5 (Q4A6X9) 30S ribosomal protein S20	33	0.71
41	RS20_FRATT (Q5NEF7) 30S ribosomal protein S20	33	0.71
42	RS20_BACLD (Q65H46) 30S ribosomal protein S20	33	0.71
43	RR20_GUITH (O78486) Chloroplast 30S ribosomal protein S20	33	0.71
44	RS20_BACHD (Q9KD79) 30S ribosomal protein S20	33	0.93
45	RS20_XYLFT (P66513) 30S ribosomal protein S20	32	1.2
46	RS20_XYLFA (P66512) 30S ribosomal protein S20	32	1.2
47	RS20_THEFY (Q47RQ2) 30S ribosomal protein S20	32	1.2
48	RS20_STRCO (Q9RDM3) 30S ribosomal protein S20	32	1.2
49	RS20_SILPO (Q5LWV5) 30S ribosomal protein S20	32	1.2
50	RS20_CHRVO (Q7NRN3) 30S ribosomal protein S20	32	1.2
51	RS20_LISMO (P66503) 30S ribosomal protein S20	32	1.6
52	RS20_LISMF (Q71ZJ0) 30S ribosomal protein S20	32	1.6
53	RS20_LISIN (P66504) 30S ribosomal protein S20	32	1.6
54	RS20_LACAC (Q5FKS2) 30S ribosomal protein S20	32	1.6
55	RS20_SHISS (Q3Z5Y7) 30S ribosomal protein S20	32	2.1
56	RS20_SHIDS (Q32K74) 30S ribosomal protein S20	32	2.1
57	RS20_SHIBS (Q326K0) 30S ribosomal protein S20	32	2.1
58	RS20_ECOLI (P0A7U7) 30S ribosomal protein S20	32	2.1
59	RS20_ECOL6 (P0A7U8) 30S ribosomal protein S20	32	2.1
60	RS20_ECO57 (P0A7U9) 30S ribosomal protein S20	32	2.1
61	RS20_DEHE1 (Q3Z617) 30S ribosomal protein S20	32	2.1
62	RS20_BARQU (Q6G0V7) 30S ribosomal protein S20	32	2.1
63	RS20_BACSK (Q5WHG9) 30S ribosomal protein S20	32	2.1
64	RS20_SALTY (P0A2B1) 30S ribosomal protein S20	31	2.7
65	RS20_SALTI (P0A2B2) 30S ribosomal protein S20	31	2.7
66	RS20_SALPA (Q5PDM2) 30S ribosomal protein S20	31	2.7
67	RS20_SALCH (Q57TL8) 30S ribosomal protein S20	31	2.7
68	RS20_BRUSU (P66502) 30S ribosomal protein S20	31	2.7
69	RS20_BRUME (P66501) 30S ribosomal protein S20	31	2.7
70	RS20_XANOR (Q5H2E4) 30S ribosomal protein S20	31	3.5
71	RS20_XANCP (Q8PBG9) 30S ribosomal protein S20	31	3.5
72	RS20_XANC8 (Q4US37) 30S ribosomal protein S20	31	3.5
73	RS20_XANC5 (Q3BW45) 30S ribosomal protein S20	31	3.5
74	RS20_XANAC (Q8PN22) 30S ribosomal protein S20	31	3.5
75	RS20_VIBPA (Q87S93) 30S ribosomal protein S20	31	3.5
76	RS20_THETN (Q8RB79) 30S ribosomal protein S20	31	3.5
77	RS20_KLEPN (P45601) 30S ribosomal protein S20 (Fragment)	31	3.5
78	RS20_CLOAB (Q97JK0) 30S ribosomal protein S20	31	3.5
79	RS20_BACHK (Q6HDJ9) 30S ribosomal protein S20	31	3.5
80	RS20_BACFR (Q64ZM9) 30S ribosomal protein S20	31	3.5
81	RS20_BACFN (Q5LIK4) 30S ribosomal protein S20	31	3.5
82	RS20_BACCZ (Q634L9) 30S ribosomal protein S20	31	3.5
83	RS20_BACCR (Q818E1) 30S ribosomal protein S20	31	3.5
84	RS20_BACC1 (Q730L3) 30S ribosomal protein S20	31	3.5
85	RS20_BACAN (Q81LR4) 30S ribosomal protein S20	31	3.5
86	YJD1_SCHPO (O74504) Hypothetical protein C594.01 in chromosome III	31	3.5
87	RS20_RHOS4 (Q3IY62) 30S ribosomal protein S20	30	4.6
88	RS20_RHILO (Q98BG8) 30S ribosomal protein S20	30	4.6
89	RS20_PROAC (Q6A9B3) 30S ribosomal protein S20	30	4.6
90	RS20_NITEU (Q82SI6) 30S ribosomal protein S20	30	4.6
91	RS20_ENTFA (Q831Q7) 30S ribosomal protein S20	30	4.6
92	ILV2_BRANA (P14874) Acetolactate synthase 2, chloroplast precurs...	30	6.0
93	LMO3_RAT (Q99MB5) LIM-only protein 3 (Neuronal-specific transcri...	30	6.0
94	RBTN1_MOUSE (Q924W9) Rhombotin-1 (Cysteine-rich protein TTG-1) (...	30	6.0
95	RBTN1_HUMAN (P25800) Rhombotin-1 (Cysteine-rich protein TTG-1) (...	30	6.0
96	ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII...	30	6.0
97	BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)	30	6.0
98	PLMP_PLEOS (P81055) Peptidyl-Lys metalloendopeptidase (EC 3.4.24...	30	6.0
99	ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII...	30	6.0
100	CP27B_RAT (O35132) 25-hydroxyvitamin D-1 alpha hydroxylase, mito...	30	6.0
101	RS20_STRAW (Q82BZ4) 30S ribosomal protein S20	30	6.0
102	RS20_MYCPU (Q98PR3) 30S ribosomal protein S20	30	6.0
103	RS20_LACLA (Q9CEU5) 30S ribosomal protein S20	30	6.0
104	RS20_DEHSC (Q3ZZW3) 30S ribosomal protein S20	30	6.0
105	RS20_BARHE (Q6G527) 30S ribosomal protein S20	30	6.0
106	RS20_BACTN (Q8A276) 30S ribosomal protein S20	30	6.0
107	HMDH_SCHMA (P16237) 3-hydroxy-3-methylglutaryl-coenzyme A reduct...	30	7.9
108	RS20_LEIXX (Q6AEB3) 30S ribosomal protein S20	30	7.9
109	RS20_LEGPL (Q5WTG3) 30S ribosomal protein S20	30	7.9
110	RS20_LEGPH (Q5ZS83) 30S ribosomal protein S20	30	7.9
111	RS20_LEGPA (Q5X1Q4) 30S ribosomal protein S20	30	7.9

>RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20|
          Length = 98

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKK-ADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRN 461
           N   K+ +RT  K+ F A E   K+  DA           ++ A+  IDK VKVG +HRN
Sbjct: 21  NRTYKSALRTLMKRCFVACEAYSKEPGDAAKATVSAS---MNAAFSKIDKAVKVGVLHRN 77

Query: 460 TGDHRKSRLA 431
            G H+KSRL+
Sbjct: 78  NGAHQKSRLS 87

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>RS20_PROMA (Q7VA27) 30S ribosomal protein S20|
          Length = 99

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N   K+ MRT  K+ F A     +K           +  +++A+  IDK VK G +HRNT
Sbjct: 21  NRTYKSAMRTLMKRCFEACGAYSEKPSED--AKKDIQNSMNDAFSKIDKAVKTGVLHRNT 78

Query: 457 GDHRKSRLAR-RKKAIE 410
           G ++KSRL    KK IE
Sbjct: 79  GANQKSRLTSVVKKTIE 95

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>RS20_SYNP6 (Q5MZ25) 30S ribosomal protein S20|
          Length = 98

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 26/70 (37%), Positives = 36/70 (51%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A K+ ++T  K  F A +     AD          + +S AY  IDK VK G +H NT
Sbjct: 21  NKAYKSAVKTLVKHCFTAFDAYA--ADPNETARQAVNERLSAAYSKIDKAVKRGVLHANT 78

Query: 457 GDHRKSRLAR 428
           G  +K+RLA+
Sbjct: 79  GARKKARLAK 88

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>RS20_PROMM (Q7TUR7) 30S ribosomal protein S20|
          Length = 100

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + K+ MRT  K+ F A     ++              I  A+  IDK VK G +HRNT
Sbjct: 21  NKSYKSAMRTLMKRCFSACSHYSQQPGETAKANVKAS--IDSAFSKIDKAVKRGVLHRNT 78

Query: 457 GDHRKSRL-ARRKKAIE 410
             H+KSRL A  K+AIE
Sbjct: 79  AAHQKSRLSAAVKQAIE 95

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>RS20_SYNEL (Q8DJN4) 30S ribosomal protein S20|
          Length = 98

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 25/70 (35%), Positives = 35/70 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A ++ +RT  K    A+ +     D  P         ++ A+  IDK VK G +HRNT
Sbjct: 21  NKAYRSAVRTLIKNYLNAISQY--STDPTPEKLAEVHHRLNLAFSKIDKAVKRGVLHRNT 78

Query: 457 GDHRKSRLAR 428
           G  RK+RL R
Sbjct: 79  GARRKARLTR 88

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>RS20_ANASP (Q8YWL3) 30S ribosomal protein S20|
          Length = 97

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 26/76 (34%), Positives = 38/76 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N   K+ ++T  K    A++     A+  P      +  ++ AY  IDK VK G +H N 
Sbjct: 21  NKTYKSSVKTLMKNYLSAVQAYA--ANPTPESKQEAQTRLAAAYSRIDKAVKRGILHPNN 78

Query: 457 GDHRKSRLARRKKAIE 410
           G  +KSRLA + K IE
Sbjct: 79  GARKKSRLASKLKPIE 94

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>RS20_THET8 (P80380) 30S ribosomal protein S20|
          Length = 105

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = -1

Query: 634 HARKAEMRTRNKKVFRALEKLRKKAD--AQPXXXXXXEKMISEAYKAIDKTVKVGAMHRN 461
           H +  + R RNK    A++ L KKA   AQ        K++ +A   IDK  K   +H+N
Sbjct: 15  HRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKN 74

Query: 460 TGDHRKSRLARRKKAI 413
               RKSRL R+ + +
Sbjct: 75  AAARRKSRLMRKVRQL 90

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>RS20_THET2 (P62661) 30S ribosomal protein S20|
          Length = 105

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = -1

Query: 634 HARKAEMRTRNKKVFRALEKLRKKAD--AQPXXXXXXEKMISEAYKAIDKTVKVGAMHRN 461
           H +  + R RNK    A++ L KKA   AQ        K++ +A   IDK  K   +H+N
Sbjct: 15  HRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKN 74

Query: 460 TGDHRKSRLARRKKAI 413
               RKSRL R+ + +
Sbjct: 75  AAARRKSRLMRKVRQL 90

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>RR20_PORPU (P51253) Chloroplast 30S ribosomal protein S20|
          Length = 94

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKA--DAQPXXXXXXEKMISEAYKAIDKTVKVGAMHR 464
           N   K+ ++T  K+    +E L      D Q          IS+ Y  IDK +K GA H 
Sbjct: 21  NRKYKSVVKTLTKRCLMNIENLENSNLNDVQLS--------ISQVYSKIDKAIKKGAFHP 72

Query: 463 NTGDHRKSRLAR 428
           NTG  +K+RLAR
Sbjct: 73  NTGARKKARLAR 84

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>RS20_UREPA (Q9PQI1) 30S ribosomal protein S20|
          Length = 84

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
 Frame = -1

Query: 604 NKKVFRALEKLRKKADAQPXXXXXXEK---------MISEAYKAIDKTVKVGAMHRNTGD 452
           N+K +R  +K+RK+  A+        K          ++EAYK ID T   G +H+N  +
Sbjct: 7   NEKTYRHTQKVRKENHAKMSKLRTIVKKTRSSNEQAQLNEAYKVIDTTASKGVIHKNKAN 66

Query: 451 HRKSRLARRKK 419
             KSR A+  K
Sbjct: 67  RLKSRTAKAFK 77

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>RS20_PROMT (Q46J20) 30S ribosomal protein S20|
          Length = 98

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRK------KADAQPXXXXXXEKMISEAYKAIDKTVKVG 476
           N   K+ +RT  K+ F A     K      KAD Q        K  + A+  IDK VK G
Sbjct: 21  NKNYKSTVRTLMKRCFVACGIFEKEPGDESKADLQ--------KTFNLAFSKIDKAVKKG 72

Query: 475 AMHRNTGDHRKSRLARRKKAI 413
            +H+NTG ++KSRL+   K +
Sbjct: 73  VLHKNTGANQKSRLSVALKKV 93

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>RS20_SYNY3 (P73336) 30S ribosomal protein S20|
          Length = 97

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 21/70 (30%), Positives = 37/70 (52%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + K+ ++T  KK F+++E     +D  P         ++ A+  IDK VK   +H+N 
Sbjct: 21  NKSYKSAIKTLMKKTFQSVEAYA--SDPNPEKLDTINTSMAAAFSKIDKAVKCKVIHKNN 78

Query: 457 GDHRKSRLAR 428
              +K+RLA+
Sbjct: 79  AARKKARLAK 88

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>RS20_CARHZ (Q3AF17) 30S ribosomal protein S20|
          Length = 93

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = -1

Query: 628 RKAEMRTR--NKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTG 455
           RK  MR +     V  A++K       +P       +++ +A +A+DK V  G +H+NT 
Sbjct: 18  RKRTMRNKAIRSAVKTAIKKFEMALKVKPAEEAR--ELLRQAVRALDKAVTKGVIHKNTA 75

Query: 454 DHRKSRLARRKKAI 413
             +KSRL R+  ++
Sbjct: 76  SRKKSRLTRKFNSV 89

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>RS20_PROMP (Q7TU38) 30S ribosomal protein S20|
          Length = 97

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 19/68 (27%), Positives = 37/68 (54%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + K+ +RT  KK     EK +++ ++           +++A+  IDK VK   +H+N 
Sbjct: 21  NKSYKSTVRTLTKKTLANCEKYKQEPNSDNKDLVLVS--VNQAFSLIDKAVKKNVLHKNN 78

Query: 457 GDHRKSRL 434
           G ++KS++
Sbjct: 79  GANKKSKI 86

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>RS20_BACSU (P21477) 30S ribosomal protein S20 (BS20)|
          Length = 87

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 25/71 (35%), Positives = 35/71 (49%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N   K+ MRT  K+V         +A          +  ++EA K IDK VK G +H+NT
Sbjct: 20  NATIKSAMRTAIKQV---------EASVANNEADKAKTALTEAAKRIDKAVKTGLVHKNT 70

Query: 457 GDHRKSRLARR 425
               KSRLA++
Sbjct: 71  AARYKSRLAKK 81

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>RR20_GRATL (Q6B8R9) Chloroplast 30S ribosomal protein S20|
          Length = 97

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 22/73 (30%), Positives = 37/73 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + K+ ++T  KK   +L++L    +            +S  YK ID+ V+ G +H+N 
Sbjct: 21  NKSYKSAIKTLIKKYINSLDELMDLNNTYVCTLK-----LSAVYKKIDQAVRKGVLHKNQ 75

Query: 457 GDHRKSRLARRKK 419
           G  +KS LA+  K
Sbjct: 76  GSRKKSMLAKAMK 88

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>RS20_THEMA (Q9X1Y7) 30S ribosomal protein S20|
          Length = 96

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A K   + R K+V +A+E    K            ++  +A  AIDK V  G +H+N 
Sbjct: 21  NKAYKTFFKNRIKEVLKAIENKEPKE--------VVLELTRKAQAAIDKAVSKGVIHKNQ 72

Query: 457 GDHRKSRL 434
           G  RK+RL
Sbjct: 73  GARRKARL 80

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>RS20_LEPIN (Q8EZQ3) 30S ribosomal protein S20|
          Length = 88

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N   ++ +RT+ KKV +A+++  +KA            +  E    +DK  K   +H   
Sbjct: 21  NSQNRSRLRTQAKKVLKAIKEKDQKA---------AMTLFIEYTSLLDKAAKTNLIHSKN 71

Query: 457 GDHRKSRLARR 425
            D +KSR+A+R
Sbjct: 72  ADRKKSRMAKR 82

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>RS20_LEPIC (Q72V55) 30S ribosomal protein S20|
          Length = 88

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N   ++ +RT+ KKV +A+++  +KA            +  E    +DK  K   +H   
Sbjct: 21  NSQNRSRLRTQAKKVLKAIKEKDQKA---------AMTLFIEYTSLLDKAAKTNLIHSKN 71

Query: 457 GDHRKSRLARR 425
            D +KSR+A+R
Sbjct: 72  ADRKKSRMAKR 82

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>RS20_GEOKA (Q5KWY9) 30S ribosomal protein S20|
          Length = 89

 Score = 37.4 bits (85), Expect = 0.038
 Identities = 25/76 (32%), Positives = 38/76 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + K+ MRT  KK F AL +L+    A+             A K +DK    G +H+N 
Sbjct: 21  NASMKSAMRTAIKK-FEALVELKDVEKAREAFII--------ASKKLDKAASKGLIHKNA 71

Query: 457 GDHRKSRLARRKKAIE 410
              +KSRLA++  +I+
Sbjct: 72  ASRQKSRLAKKLNSIQ 87

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>RS20_FUSNN (Q8RHW1) 30S ribosomal protein S20|
          Length = 90

 Score = 37.4 bits (85), Expect = 0.038
 Identities = 24/75 (32%), Positives = 36/75 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A K  ++T  KKV   +E   K  +A           +S AYK  DK V  G + +NT
Sbjct: 21  NQAVKTRVKTMAKKVLSTIEV--KDVEAAKVA-------LSVAYKEFDKAVSKGILKKNT 71

Query: 457 GDHRKSRLARRKKAI 413
              +K+RLA +  ++
Sbjct: 72  ASRKKARLAAKVNSL 86

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>RS20_GLOVI (Q7NP97) 30S ribosomal protein S20|
          Length = 102

 Score = 36.6 bits (83), Expect = 0.064
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A K+ ++T  KK    L +  +            + ++++ +  IDK +K G +H NT
Sbjct: 21  NIAYKSMIKTFTKKFMTRLGEYAQSPSE--AVLTEVQALLNQTFSRIDKAIKAGVIHTNT 78

Query: 457 GDHRKSRL 434
           G  +KSRL
Sbjct: 79  GARKKSRL 86

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>RS20_PSEHT (Q3IEA5) 30S ribosomal protein S20|
          Length = 86

 Score = 36.2 bits (82), Expect = 0.084
 Identities = 25/75 (33%), Positives = 37/75 (49%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV  A+E   K+A  Q           S A   +D+    G +H+N 
Sbjct: 21  NASRRSMMRTYFKKVIVAIEAGDKEAAQQA---------FSVATPILDRYATKGLIHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               KSR+A + KA+
Sbjct: 72  AARHKSRIAAKIKAL 86

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>RS20_NEIMB (P66508) 30S ribosomal protein S20|
          Length = 87

 Score = 36.2 bits (82), Expect = 0.084
 Identities = 25/75 (33%), Positives = 36/75 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + +   RT  KKV +A+E    KA AQ         +  E+ K ID+    G  H+N 
Sbjct: 21  NASLRTAFRTAVKKVLKAVEA-GDKAAAQA--------VYQESVKVIDRIADKGVFHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               KSRL+ + KA+
Sbjct: 72  AARHKSRLSAKVKAL 86

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>RS20_NEIMA (P66507) 30S ribosomal protein S20|
          Length = 87

 Score = 36.2 bits (82), Expect = 0.084
 Identities = 25/75 (33%), Positives = 36/75 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + +   RT  KKV +A+E    KA AQ         +  E+ K ID+    G  H+N 
Sbjct: 21  NASLRTAFRTAVKKVLKAVEA-GDKAAAQA--------VYQESVKVIDRIADKGVFHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               KSRL+ + KA+
Sbjct: 72  AARHKSRLSAKVKAL 86

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>RS20_NEIG1 (Q5F6Q6) 30S ribosomal protein S20|
          Length = 87

 Score = 36.2 bits (82), Expect = 0.084
 Identities = 25/75 (33%), Positives = 36/75 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + +   RT  KKV +A+E    KA AQ         +  E+ K ID+    G  H+N 
Sbjct: 21  NASLRTAFRTAVKKVLKAVEA-GDKAAAQA--------VYQESVKVIDRIADKGVFHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               KSRL+ + KA+
Sbjct: 72  AARHKSRLSAKVKAL 86

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>RR20_ODOSI (P49507) Chloroplast 30S ribosomal protein S20|
          Length = 93

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N   K+ +RT  K   + LE    K    P      +  +S  Y  IDK  K    H+NT
Sbjct: 21  NRFYKSSVRTLTKLYLKDLEVY--KISRNPSDKEKAKNRLSLVYSLIDKGSKRNVFHKNT 78

Query: 457 GDHRKSRLARRKK 419
              +KS+LA + K
Sbjct: 79  AARKKSKLASQLK 91

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>RS20_OCEIH (Q8EPW0) 30S ribosomal protein S20|
          Length = 86

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 22/75 (29%), Positives = 36/75 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N  + + MRT  K+V +A+E                + +   A K IDK  + G +H+N 
Sbjct: 21  NSKQLSAMRTEVKRVEKAVEA---------NDTDNAKSLFQSASKHIDKAAQKGIIHQNA 71

Query: 457 GDHRKSRLARRKKAI 413
            + +KSRLA +  A+
Sbjct: 72  ANRQKSRLANKINAL 86

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>RS20_MYCMO (Q6KHC4) 30S ribosomal protein S20|
          Length = 91

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A K+ +R   KK  RA+E+  +  +          +++ +A+K I+ +V  G  HRN 
Sbjct: 21  NAAMKSHVRLAIKKAKRAIEEKNENVE----------QLLKDAHKVINTSVSHGVFHRNN 70

Query: 457 GDHRKSRL 434
              + SRL
Sbjct: 71  AARKSSRL 78

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>RS20_CLOPE (Q8XIS2) 30S ribosomal protein S20|
          Length = 87

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -1

Query: 607 RNKKVFRALEKLRKKADA--QPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRKSRL 434
           RNK +  AL+   KK +   Q         +  EA +A+D +   G +H+N    +KSRL
Sbjct: 20  RNKMIKSALKTAIKKFEVAVQANNKAEAATLYVEAARALDMSASKGVVHKNMAARKKSRL 79

Query: 433 ARRKKAI 413
           A +  A+
Sbjct: 80  AAKLNAM 86

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>RS20_CAUCR (P49400) 30S ribosomal protein S20|
          Length = 91

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = -1

Query: 631 ARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKM-ISEAYKAIDKTVKVGAMHRNTG 455
           AR+ E+ T  +   R    LRK  DA         K    EA   + + V  G +H NTG
Sbjct: 15  ARRTEVNTARRSRVRTF--LRKFEDAIAKGDVAVAKAAFVEAQSELMRAVSKGVVHPNTG 72

Query: 454 DHRKSRLARRKKAIE 410
             + SRLA R K ++
Sbjct: 73  SRKVSRLAARLKKLD 87

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>RS20_PHOPR (Q6LUL5) 30S ribosomal protein S20|
          Length = 86

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV  A+E   K+            K  ++    +D+    G +H+N 
Sbjct: 21  NASRRSMMRTFFKKVIAAIEAGEKE---------NATKAFADMQPVLDRMATKGLIHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
              +K+RL  + KA+
Sbjct: 72  AARQKARLTAKIKAL 86

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>RS20_METCA (Q605N0) 30S ribosomal protein S20|
          Length = 92

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEK--LRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHR 464
           N A ++ +RT  KKV  A++   L K  +A             +A   ID +V  G +HR
Sbjct: 21  NAALRSRLRTYIKKVILAVDSGDLTKAQEA-----------FRQAVPIIDSSVNKGLIHR 69

Query: 463 NTGDHRKSRLARRKKAIEI 407
           N     KSRL  R KA+ +
Sbjct: 70  NKAARSKSRLNARVKALAL 88

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>RS20_DEIRA (Q9RUS3) 30S ribosomal protein S20|
          Length = 92

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A+K+ ++T +KK   A +   + A A          M   A   IDK  K   +H+N 
Sbjct: 22  NRAKKSTIKTFSKKALVAAQGGAEDATA----------MQQRAESLIDKAAKGSTLHKNA 71

Query: 457 GDHRKSRLAR 428
              +KSRLA+
Sbjct: 72  AARKKSRLAK 81

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>RS20_COREF (Q8FNA1) 30S ribosomal protein S20|
          Length = 87

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 23/70 (32%), Positives = 34/70 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A ++ +RT  +K   A++   K A          E  +  A +A+DK V  G  HRN 
Sbjct: 21  NQAIRSAVRTEIRKFHAAIDGGDKAA---------AESQLRVASRALDKAVTKGVFHRNN 71

Query: 457 GDHRKSRLAR 428
             ++KS LAR
Sbjct: 72  AANKKSSLAR 81

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>RS20_COLP3 (Q486U3) 30S ribosomal protein S20|
          Length = 86

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 23/75 (30%), Positives = 35/75 (46%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV  A+E   K+            K ++ A   +D+    G +H+N 
Sbjct: 21  NASRRSMMRTLVKKVLAAIEAGDKEV---------ATKELAAATPTLDRYASKGLIHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               KSRL    KA+
Sbjct: 72  AARSKSRLNAAIKAL 86

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>RS20_SYMTH (Q67S82) 30S ribosomal protein S20|
          Length = 94

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -1

Query: 622 AEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRK 443
           A+   RNK V  +L    +K   +         +++ A+ A+D+    G +H+NT   +K
Sbjct: 15  AKRTARNKMVKSSLRTAIRKF-REALGTENAPILLNRAFSALDRAASKGVIHKNTAARKK 73

Query: 442 SRLAR 428
           +RLA+
Sbjct: 74  ARLAK 78

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>RS20_CORDI (Q6NFX0) 30S ribosomal protein S20|
          Length = 87

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 23/69 (33%), Positives = 35/69 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A ++ +RT  +K FRA      KA A+          +  A +A+DK+V  G  HRN 
Sbjct: 21  NQAIRSAVRTEIRK-FRAAVAAGDKAAAEA--------QLRVASRALDKSVTKGVFHRNN 71

Query: 457 GDHRKSRLA 431
             ++KS +A
Sbjct: 72  AANKKSNMA 80

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>RS20_ANAMM (Q5P9I2) 30S ribosomal protein S20|
          Length = 96

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 24/77 (31%), Positives = 30/77 (38%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N  RK+ +R   KK    LE      DA              A   I K V  G MHRNT
Sbjct: 21  NRVRKSRVRNSVKKFLAVLESKGHLEDAVTAFRA--------AESNIHKCVNKGVMHRNT 72

Query: 457 GDHRKSRLARRKKAIEI 407
              +   LA + KA ++
Sbjct: 73  AARKVKSLAAKLKAFDL 89

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>RS20_MYCS5 (Q4A6X9) 30S ribosomal protein S20|
          Length = 88

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEK-LRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRN 461
           N +R    R +N  +   ++K +RK  +A        ++++++A+  I K V  G MH N
Sbjct: 10  NISRIETARVKNAAIKSRVKKAIRKAREAILENSPKAQELVNKAHHEIGKAVSKGVMHLN 69

Query: 460 TGDHRKSRL 434
            G  + SRL
Sbjct: 70  KGARKSSRL 78

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>RS20_FRATT (Q5NEF7) 30S ribosomal protein S20|
          Length = 90

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N AR++ MRT  KK   A+EK   +A          ++  ++    +DK    G +H+N 
Sbjct: 21  NVARRSMMRTFLKKTAYAIEKGDVEA---------AKENFAKVVPILDKYASKGLIHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               KSRL+ + KA+
Sbjct: 72  AARHKSRLSAKIKAL 86

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>RS20_BACLD (Q65H46) 30S ribosomal protein S20|
          Length = 88

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = -1

Query: 619 EMRTRNKKVFRALEKLRKKADA--QPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHR 446
           E R  N  +  A+    K+ +           +  +S A K IDK  K G +H+NT    
Sbjct: 16  ERRAHNATIKSAMRTAMKQVETFVSNNEADKAKAALSAAAKKIDKAAKKGLVHKNTAARY 75

Query: 445 KSRLARR 425
           KS LA++
Sbjct: 76  KSNLAKK 82

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>RR20_GUITH (O78486) Chloroplast 30S ribosomal protein S20|
          Length = 95

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 20/77 (25%), Positives = 35/77 (45%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N   K+ ++T  KK   A+E                 ++++     IDK V+ G +H N 
Sbjct: 21  NKTYKSMLKTYYKKCIVAIETTNNN----DLETSNLRELVAITQSKIDKAVQKGIIHSNN 76

Query: 457 GDHRKSRLARRKKAIEI 407
           G  +K++L +R K  +I
Sbjct: 77  GSAKKAKLTKRLKEKKI 93

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>RS20_BACHD (Q9KD79) 30S ribosomal protein S20|
          Length = 91

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -1

Query: 613 RTRNKKVFRALEKLRKKADAQPXXXXXXEKMIS--EAYKAIDKTVKVGAMHRNTGDHRKS 440
           R +N  V  AL    K+ +A+           +  EA K +DK    G +H+N    +KS
Sbjct: 21  RIQNASVKSALRTAIKQFEAKVENNDAEAAKAAFVEATKKLDKAANKGLIHKNAASRQKS 80

Query: 439 RLARR 425
           RLA++
Sbjct: 81  RLAKK 85

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>RS20_XYLFT (P66513) 30S ribosomal protein S20|
          Length = 89

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 23/76 (30%), Positives = 38/76 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A+++ +RT  KKV +AL  ++  A A+           + A   +D+    G +H+N 
Sbjct: 21  NTAQRSMLRTAVKKVIKALS-IKDIAGAETA--------FAVAQPILDRFSSRGLIHKNK 71

Query: 457 GDHRKSRLARRKKAIE 410
               KSRL  R KA++
Sbjct: 72  AARHKSRLTARIKALK 87

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>RS20_XYLFA (P66512) 30S ribosomal protein S20|
          Length = 89

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 23/76 (30%), Positives = 38/76 (50%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A+++ +RT  KKV +AL  ++  A A+           + A   +D+    G +H+N 
Sbjct: 21  NTAQRSMLRTAVKKVIKALS-IKDIAGAETA--------FAVAQPILDRFSSRGLIHKNK 71

Query: 457 GDHRKSRLARRKKAIE 410
               KSRL  R KA++
Sbjct: 72  AARHKSRLTARIKALK 87

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>RS20_THEFY (Q47RQ2) 30S ribosomal protein S20|
          Length = 92

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = -1

Query: 613 RTRNKKVFRALEK-LRKKADAQPXXXXXXEKMISEAY-KAIDKTVKVGAMHRNTGDHRKS 440
           R RNK V  +L+  +RK  +A          ++  A  + +DK V  G +H+N   +RKS
Sbjct: 18  RLRNKAVKSSLKTAIRKFREAAEAGNVEEAIILQRAAARQLDKAVSKGVIHKNQAANRKS 77

Query: 439 RLARR 425
            +A+R
Sbjct: 78  AIAKR 82

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>RS20_STRCO (Q9RDM3) 30S ribosomal protein S20|
          Length = 88

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = -1

Query: 613 RTRNKKVFRALEKLRKKAD--AQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRKS 440
           R RNK V  +L+   +KA   A         +    A + +DK V  G +H+N   ++KS
Sbjct: 18  RLRNKSVKSSLKTAIRKAREAAAAGDVEKATEFQRVASRELDKAVSKGVIHKNQAANKKS 77

Query: 439 RLARRKKAIE 410
            LA++  A++
Sbjct: 78  ALAQKVGALK 87

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>RS20_SILPO (Q5LWV5) 30S ribosomal protein S20|
          Length = 87

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N AR++ +RT  +KV  A+    K A             +  A   + + V  G  H+NT
Sbjct: 21  NKARRSRIRTFLRKVEEAIASGDKDA---------ATAALRAAQPELMRGVSKGVFHKNT 71

Query: 457 GDHRKSRLARRKKAI 413
              + SRL+ R KA+
Sbjct: 72  ASRKMSRLSSRVKAL 86

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>RS20_CHRVO (Q7NRN3) 30S ribosomal protein S20|
          Length = 87

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/75 (29%), Positives = 33/75 (44%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + +   RT  KKV +A+E   K A            +   + K ID+    G  H+N 
Sbjct: 21  NASLRTAFRTAVKKVLKAIEAGDKAA---------ARVVFQASEKVIDRIADKGVFHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               KSRL+ + KA+
Sbjct: 72  AARHKSRLSAQIKAM 86

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>RS20_LISMO (P66503) 30S ribosomal protein S20|
          Length = 84

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -1

Query: 628 RKAEMR-TRNKKVFRALEKLRKKADAQPXXXXXXEK-MISEAYKAIDKTVKVGAMHRNTG 455
           + AE R +RN     A+    KK D          K +  EA K +D  V  G +H+N  
Sbjct: 12  KTAETRNSRNASQRSAMRTAIKKFDEAAANNADNAKDLYVEASKKLDSAVSKGLIHKNNA 71

Query: 454 DHRKSRLARR 425
              KSRLA +
Sbjct: 72  ARNKSRLAAK 81

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>RS20_LISMF (Q71ZJ0) 30S ribosomal protein S20|
          Length = 84

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -1

Query: 628 RKAEMR-TRNKKVFRALEKLRKKADAQPXXXXXXEK-MISEAYKAIDKTVKVGAMHRNTG 455
           + AE R +RN     A+    KK D          K +  EA K +D  V  G +H+N  
Sbjct: 12  KTAETRNSRNASQRSAMRTAIKKFDEAAANNADNAKDLYVEASKKLDSAVSKGLIHKNNA 71

Query: 454 DHRKSRLARR 425
              KSRLA +
Sbjct: 72  ARNKSRLAAK 81

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>RS20_LISIN (P66504) 30S ribosomal protein S20|
          Length = 84

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -1

Query: 628 RKAEMR-TRNKKVFRALEKLRKKADAQPXXXXXXEK-MISEAYKAIDKTVKVGAMHRNTG 455
           + AE R +RN     A+    KK D          K +  EA K +D  V  G +H+N  
Sbjct: 12  KTAETRNSRNASQRSAMRTAIKKFDEAAANNADNAKDLYVEASKKLDSAVSKGLIHKNNA 71

Query: 454 DHRKSRLARR 425
              KSRLA +
Sbjct: 72  ARNKSRLAAK 81

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>RS20_LACAC (Q5FKS2) 30S ribosomal protein S20|
          Length = 85

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +  +++RT  KK   A+E   K+            K+  EA +A+DK    G +H+N 
Sbjct: 21  NASELSKLRTAIKKFKNAVETDSKE---------DVSKLHLEAVRALDKAASKGLIHKNK 71

Query: 457 GDHRKSRLAR 428
               KSRL +
Sbjct: 72  AARDKSRLTK 81

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>RS20_SHISS (Q3Z5Y7) 30S ribosomal protein S20|
          Length = 87

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E    KA AQ        K  +E    +D+    G +H+N 
Sbjct: 21  NASRRSMMRTFIKKVYAAIE-AGDKAAAQ--------KAFNEMQPIVDRQAAKGLIHKNK 71

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 72  AARHKANL 79

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>RS20_SHIDS (Q32K74) 30S ribosomal protein S20|
          Length = 87

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E    KA AQ        K  +E    +D+    G +H+N 
Sbjct: 21  NASRRSMMRTFIKKVYAAIE-AGDKAAAQ--------KAFNEMQPIVDRQAAKGLIHKNK 71

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 72  AARHKANL 79

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>RS20_SHIBS (Q326K0) 30S ribosomal protein S20|
          Length = 87

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E    KA AQ        K  +E    +D+    G +H+N 
Sbjct: 21  NASRRSMMRTFIKKVYAAIE-AGDKAAAQ--------KAFNEMQPIVDRQAAKGLIHKNK 71

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 72  AARHKANL 79

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>RS20_ECOLI (P0A7U7) 30S ribosomal protein S20|
          Length = 86

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E    KA AQ        K  +E    +D+    G +H+N 
Sbjct: 20  NASRRSMMRTFIKKVYAAIE-AGDKAAAQ--------KAFNEMQPIVDRQAAKGLIHKNK 70

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 71  AARHKANL 78

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>RS20_ECOL6 (P0A7U8) 30S ribosomal protein S20|
          Length = 86

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E    KA AQ        K  +E    +D+    G +H+N 
Sbjct: 20  NASRRSMMRTFIKKVYAAIE-AGDKAAAQ--------KAFNEMQPIVDRQAAKGLIHKNK 70

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 71  AARHKANL 78

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>RS20_ECO57 (P0A7U9) 30S ribosomal protein S20|
          Length = 86

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E    KA AQ        K  +E    +D+    G +H+N 
Sbjct: 20  NASRRSMMRTFIKKVYAAIE-AGDKAAAQ--------KAFNEMQPIVDRQAAKGLIHKNK 70

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 71  AARHKANL 78

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>RS20_DEHE1 (Q3Z617) 30S ribosomal protein S20|
          Length = 88

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -1

Query: 631 ARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGD 452
           A + E R    +V  +L K++K  DA          +   A   +DK  + G +H     
Sbjct: 16  ANRQENRRAKSQVKTSLTKVKKLVDAGSLTEAEAAAV--SAQSTLDKAAEKGILHPKNAA 73

Query: 451 HRKSRLARR 425
            RKSRL ++
Sbjct: 74  RRKSRLMKK 82

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>RS20_BARQU (Q6G0V7) 30S ribosomal protein S20|
          Length = 88

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = -1

Query: 628 RKAEMRTRNKKVFRALEK--LRKKADAQPXXXXXXEKMISEAYKA-IDKTVKVGAMHRNT 458
           RK   RT+  +  R+  +  +RK  DA         ++  + ++  I + V  G  H+NT
Sbjct: 12  RKVAARTQINRARRSRVRAFMRKFYDALAGGDKVSAEVAFKNFEPEIMRAVSKGVFHKNT 71

Query: 457 GDHRKSRLARRKKAIEI 407
              + SRLA+R KA+ +
Sbjct: 72  AARKVSRLAKRLKALSV 88

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>RS20_BACSK (Q5WHG9) 30S ribosomal protein S20|
          Length = 88

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 514 EAYKAIDKTVKVGAMHRNTGDHRKSRLARR 425
           EA K +DK    G +H+N    +KSRLA++
Sbjct: 53  EASKKLDKAATKGLIHKNAASRQKSRLAKK 82

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>RS20_SALTY (P0A2B1) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E   K A           K  +E    +D+    G +H+N 
Sbjct: 20  NASRRSMMRTFIKKVYAAIEAGDKAA---------ALKAFNEMQPIVDRQAAKGLIHKNK 70

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 71  AARHKANL 78

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>RS20_SALTI (P0A2B2) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E   K A           K  +E    +D+    G +H+N 
Sbjct: 20  NASRRSMMRTFIKKVYAAIEAGDKAA---------ALKAFNEMQPIVDRQAAKGLIHKNK 70

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 71  AARHKANL 78

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>RS20_SALPA (Q5PDM2) 30S ribosomal protein S20|
          Length = 87

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E   K A           K  +E    +D+    G +H+N 
Sbjct: 21  NASRRSMMRTFIKKVYAAIEAGDKAA---------ALKAFNEMQPIVDRQAAKGLIHKNK 71

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 72  AARHKANL 79

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>RS20_SALCH (Q57TL8) 30S ribosomal protein S20|
          Length = 87

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E   K A           K  +E    +D+    G +H+N 
Sbjct: 21  NASRRSMMRTFIKKVYAAIEAGDKAA---------ALKAFNEMQPIVDRQAAKGLIHKNK 71

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 72  AARHKANL 79

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>RS20_BRUSU (P66502) 30S ribosomal protein S20|
          Length = 88

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAID----KTVKVGAM 470
           N +R++ +RT  +K+  AL    K+A                A+KA++    +    G +
Sbjct: 21  NKSRRSRVRTFVRKLEDALLSGDKQA-------------AEVAFKAVEPELMRAASKGVV 67

Query: 469 HRNTGDHRKSRLARRKKAI 413
           H+NT   + SRLA+R KA+
Sbjct: 68  HKNTAARKVSRLAKRVKAL 86

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>RS20_BRUME (P66501) 30S ribosomal protein S20|
          Length = 88

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAID----KTVKVGAM 470
           N +R++ +RT  +K+  AL    K+A                A+KA++    +    G +
Sbjct: 21  NKSRRSRVRTFVRKLEDALLSGDKQA-------------AEVAFKAVEPELMRAASKGVV 67

Query: 469 HRNTGDHRKSRLARRKKAI 413
           H+NT   + SRLA+R KA+
Sbjct: 68  HKNTAARKVSRLAKRVKAL 86

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>RS20_XANOR (Q5H2E4) 30S ribosomal protein S20|
          Length = 89

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N  +++ +RT  KKV +AL+     A A+           + A   +D+    G +H+N 
Sbjct: 21  NTGQRSMLRTAVKKVIKALDA-NDAAGAEAA--------FAVAQPILDRFSARGLIHKNK 71

Query: 457 GDHRKSRLARRKKAIE 410
               KSRL  R KAI+
Sbjct: 72  AARHKSRLTARIKAIK 87

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>RS20_XANCP (Q8PBG9) 30S ribosomal protein S20|
          Length = 89

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N  +++ +RT  KKV +AL+     A A+           + A   +D+    G +H+N 
Sbjct: 21  NTGQRSMLRTAVKKVIKALDA-NDAAGAEAA--------FAVAQPILDRFSARGLIHKNK 71

Query: 457 GDHRKSRLARRKKAIE 410
               KSRL  R KAI+
Sbjct: 72  AARHKSRLTARIKAIK 87

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>RS20_XANC8 (Q4US37) 30S ribosomal protein S20|
          Length = 89

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N  +++ +RT  KKV +AL+     A A+           + A   +D+    G +H+N 
Sbjct: 21  NTGQRSMLRTAVKKVIKALDA-NDAAGAEAA--------FAVAQPILDRFSARGLIHKNK 71

Query: 457 GDHRKSRLARRKKAIE 410
               KSRL  R KAI+
Sbjct: 72  AARHKSRLTARIKAIK 87

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>RS20_XANC5 (Q3BW45) 30S ribosomal protein S20|
          Length = 89

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N  +++ +RT  KKV +AL+     A A+           + A   +D+    G +H+N 
Sbjct: 21  NTGQRSMLRTAVKKVIKALDA-NDAAGAEAA--------FAVAQPILDRFSARGLIHKNK 71

Query: 457 GDHRKSRLARRKKAIE 410
               KSRL  R KAI+
Sbjct: 72  AARHKSRLTARIKAIK 87

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>RS20_XANAC (Q8PN22) 30S ribosomal protein S20|
          Length = 89

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N  +++ +RT  KKV +AL+     A A+           + A   +D+    G +H+N 
Sbjct: 21  NTGQRSMLRTAVKKVIKALDA-NDAAGAEAA--------FAVAQPILDRFSARGLIHKNK 71

Query: 457 GDHRKSRLARRKKAIE 410
               KSRL  R KAI+
Sbjct: 72  AARHKSRLTARIKAIK 87

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>RS20_VIBPA (Q87S93) 30S ribosomal protein S20|
          Length = 86

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KK   A+E   K+A              +     +D+    G +H+N 
Sbjct: 21  NASRRSMMRTYMKKTVAAIEAGDKEA---------ATAAFAVVTPILDRMATKGLIHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               KSR A + KA+
Sbjct: 72  AARHKSRFAAQIKAL 86

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>RS20_THETN (Q8RB79) 30S ribosomal protein S20|
          Length = 105

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 511 AYKAIDKTVKVGAMHRNTGDHRKSRLARRKKAI 413
           A K +DK V  G +H+NT   +KS+L  +  A+
Sbjct: 66  AVKELDKAVSKGVLHKNTAARKKSKLYAKFNAL 98

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>RS20_KLEPN (P45601) 30S ribosomal protein S20 (Fragment)|
          Length = 72

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N +R++ MRT  KKV+ A+E    KA AQ        K  +E    +D+    G +H+N 
Sbjct: 13  NASRRSMMRTFIKKVYAAIE-AGDKAAAQ--------KAFNEMQPIVDRQAAKGLIHKNK 63

Query: 457 GDHRKSRL 434
               K+ L
Sbjct: 64  RARHKANL 71

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>RS20_CLOAB (Q97JK0) 30S ribosomal protein S20|
          Length = 88

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -1

Query: 607 RNKKVFRALEKLRKKADA--QPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRKSRL 434
           RNK +  AL+   KK +A  +       +   +   KA+D     G +H+N    +KSRL
Sbjct: 20  RNKMIKSALKTYIKKFEAAFEAKNVEESKTAFATVSKALDMAASKGIIHKNKAARKKSRL 79

Query: 433 ARRKKAI 413
           A +  ++
Sbjct: 80  ALKLNSL 86

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>RS20_BACHK (Q6HDJ9) 30S ribosomal protein S20|
          Length = 85

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = -1

Query: 631 ARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGD 452
           A  A +++  +   + +E L    D +       ++    A K +DK  + G +H+N   
Sbjct: 19  AHNASIKSDMRSAVKTVEALVTNNDLE-----NAKEAFKTASKKLDKAARKGLIHQNAAA 73

Query: 451 HRKSRLARRKKA 416
            +KSRLA++  A
Sbjct: 74  RQKSRLAKQVNA 85

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>RS20_BACFR (Q64ZM9) 30S ribosomal protein S20|
          Length = 84

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = -1

Query: 628 RKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDH 449
           R+   R   K +  A+ KLR   D           M     K +DK  K   +H+N  ++
Sbjct: 17  RRLRNRYYGKTMRNAVRKLRSTTDKAEATA-----MYPGIVKMVDKLAKTNVIHKNKANN 71

Query: 448 RKSRLA 431
            KS+LA
Sbjct: 72  LKSKLA 77

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>RS20_BACFN (Q5LIK4) 30S ribosomal protein S20|
          Length = 84

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = -1

Query: 628 RKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDH 449
           R+   R   K +  A+ KLR   D           M     K +DK  K   +H+N  ++
Sbjct: 17  RRLRNRYYGKTMRNAVRKLRSTTDKAEATA-----MYPGIVKMVDKLAKTNVIHKNKANN 71

Query: 448 RKSRLA 431
            KS+LA
Sbjct: 72  LKSKLA 77

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>RS20_BACCZ (Q634L9) 30S ribosomal protein S20|
          Length = 85

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = -1

Query: 631 ARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGD 452
           A  A +++  +   + +E L    D +       ++    A K +DK  + G +H+N   
Sbjct: 19  AHNASIKSDMRSAVKTVEALVTNNDLE-----NAKEAFKTASKKLDKAARKGLIHQNAAA 73

Query: 451 HRKSRLARRKKA 416
            +KSRLA++  A
Sbjct: 74  RQKSRLAKQVNA 85

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>RS20_BACCR (Q818E1) 30S ribosomal protein S20|
          Length = 85

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = -1

Query: 631 ARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGD 452
           A  A +++  +   + +E L    D +       ++    A K +DK  + G +H+N   
Sbjct: 19  AHNASIKSDMRSAVKTVEALVTNNDLE-----NAKEAFKTASKKLDKAARKGLIHQNAAA 73

Query: 451 HRKSRLARRKKA 416
            +KSRLA++  A
Sbjct: 74  RQKSRLAKQVNA 85

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>RS20_BACC1 (Q730L3) 30S ribosomal protein S20|
          Length = 85

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = -1

Query: 631 ARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGD 452
           A  A +++  +   + +E L    D +       ++    A K +DK  + G +H+N   
Sbjct: 19  AHNASIKSDMRSAVKTVEALVTNNDLE-----NAKEAFKTASKKLDKAARKGLIHQNAAA 73

Query: 451 HRKSRLARRKKA 416
            +KSRLA++  A
Sbjct: 74  RQKSRLAKQVNA 85

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>RS20_BACAN (Q81LR4) 30S ribosomal protein S20|
          Length = 85

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = -1

Query: 631 ARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGD 452
           A  A +++  +   + +E L    D +       ++    A K +DK  + G +H+N   
Sbjct: 19  AHNASIKSDMRSAVKTVEALVTNNDLE-----NAKEAFKTASKKLDKAARKGLIHQNAAA 73

Query: 451 HRKSRLARRKKA 416
            +KSRLA++  A
Sbjct: 74  RQKSRLAKQVNA 85

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>YJD1_SCHPO (O74504) Hypothetical protein C594.01 in chromosome III|
          Length = 791

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -1

Query: 526 KMISEAYKAIDKTVKVGAMHRNTGDHRKSRLARRKKAIE 410
           K +S   +++DK +++G++HR+   H K+ L      IE
Sbjct: 460 KKMSAPRRSLDKLIRIGSLHRHHHHHHKTDLIESDSGIE 498

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>RS20_RHOS4 (Q3IY62) 30S ribosomal protein S20|
          Length = 92

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 26/91 (28%), Positives = 40/91 (43%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N AR++ +RT  +KV  A+       DA           +  A   + + V  G +H+NT
Sbjct: 21  NKARRSRIRTFLRKVEEAIAT----GDASVAAAA-----LKTAQPELARGVTKGVLHKNT 71

Query: 457 GDHRKSRLARRKKAIEIIRGWYVPNAEPAAA 365
              + SRLA R K +          ++PAAA
Sbjct: 72  VARKMSRLAHRVKVL----------SQPAAA 92

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>RS20_RHILO (Q98BG8) 30S ribosomal protein S20|
          Length = 88

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 23/75 (30%), Positives = 35/75 (46%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N  R++ +RT  ++V  AL     KA AQ        +++  A K        G +H+NT
Sbjct: 21  NKNRRSRVRTYVRQVEEALAS-GDKAAAQAAFKAAEPELMRAATK--------GVIHKNT 71

Query: 457 GDHRKSRLARRKKAI 413
              + SRLA R K +
Sbjct: 72  ASRKVSRLAARLKVL 86

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>RS20_PROAC (Q6A9B3) 30S ribosomal protein S20|
          Length = 88

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -1

Query: 613 RTRNKKVFRALEKLRK--KADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRKS 440
           R RNK V  AL    +  +  A+        K    A + +DK    G +H+N   +RKS
Sbjct: 18  RQRNKAVKSALRTYVRNFRRAAEAGDVEAATKAARVANRQLDKAASKGVIHKNQAANRKS 77

Query: 439 RLARRKKAI 413
            ++++  ++
Sbjct: 78  AISKKLNSL 86

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>RS20_NITEU (Q82SI6) 30S ribosomal protein S20|
          Length = 87

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
 Frame = -1

Query: 628 RKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISE-----AYKAIDKTVKVGAMHR 464
           R  +  TR ++ F    KLR             +K ++E     A   ID     G +H+
Sbjct: 10  RVRQTATRRERNFGLRSKLRTAIKGVRKAVAAGDKNVAEVVFRKAVSVIDSVASKGIIHK 69

Query: 463 NTGDHRKSRLARRKKAI 413
           N     KSRL+   KA+
Sbjct: 70  NKASRHKSRLSGAVKAM 86

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>RS20_ENTFA (Q831Q7) 30S ribosomal protein S20|
          Length = 83

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N ++   MRT  KK   A+       DA          + +EA KA+D     G +H+N 
Sbjct: 21  NSSQTNAMRTAIKKFEEAVAAGADNVDA----------LYNEAVKAVDMAATKGLIHKNK 70

Query: 457 GDHRKSRLARRKK 419
            +  K RL++  K
Sbjct: 71  ANRDKIRLSKLAK 83

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>ILV2_BRANA (P14874) Acetolactate synthase 2, chloroplast precursor (EC|
           2.2.1.6) (Acetolactate synthase II) (Acetohydroxy-acid
           synthase II) (ALS II)
          Length = 637

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 286 YAVQNWQDVMKEKLLQFTMTTPPETRQLQQV 378
           +A+ NW+  M+  L   TM  PP+   L+Q+
Sbjct: 238 FAIPNWEQPMRLPLYMSTMPKPPKVSHLEQI 268

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>LMO3_RAT (Q99MB5) LIM-only protein 3 (Neuronal-specific transcription factor|
           DAT1)
          Length = 145

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -1

Query: 262 LPVLPHGKCSGTGYCVYVLC--YALEALTQYWAIACLTFLCC 143
           L V P GK  G   C   +   Y L+AL +YW   CL   CC
Sbjct: 2   LSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACC 43

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>RBTN1_MOUSE (Q924W9) Rhombotin-1 (Cysteine-rich protein TTG-1) (LIM-only|
           protein 1)
          Length = 156

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -1

Query: 262 LPVLPHGKCSGTGYCVYVLC--YALEALTQYWAIACLTFLCC 143
           L V P GK  G   C   +   Y L+AL +YW   CL   CC
Sbjct: 13  LSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACC 54

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>RBTN1_HUMAN (P25800) Rhombotin-1 (Cysteine-rich protein TTG-1) (T-cell|
           translocation protein 1) (LIM-only protein 1)
          Length = 156

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -1

Query: 262 LPVLPHGKCSGTGYCVYVLC--YALEALTQYWAIACLTFLCC 143
           L V P GK  G   C   +   Y L+AL +YW   CL   CC
Sbjct: 13  LSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACC 54

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>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3|
           (Elongin A3) (EloA3) (Transcription elongation factor B
           polypeptide 3C)
          Length = 546

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 25/88 (28%), Positives = 36/88 (40%)
 Frame = -1

Query: 625 KAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHR 446
           K ++R   K   + LEK  +K  A P            A   I KTVK    H++ GD  
Sbjct: 13  KLQVRLATKTEPKKLEKYLQKLSALPMTADIL------AETGIRKTVKRLRKHQHVGDFA 66

Query: 445 KSRLARRKKAIEIIRGWYVPNAEPAAAA 362
           +   AR KK + + R       +P  +A
Sbjct: 67  RDLAARWKKLVLVDRNTGPDPQDPEESA 94

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>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 820

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 16/62 (25%), Positives = 33/62 (53%)
 Frame = -1

Query: 607 RNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRKSRLAR 428
           + +K   +LE   ++A+A         + +S+ ++A+D+TVK   +    G+ + +RLA 
Sbjct: 542 KKEKERASLEMKLEEAEAATNALYSEVEGLSKLWEALDQTVKSKVLELRDGEQKITRLAT 601

Query: 427 RK 422
            K
Sbjct: 602 EK 603

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>PLMP_PLEOS (P81055) Peptidyl-Lys metalloendopeptidase (EC 3.4.24.20) (MEP)|
           (PoMEP)
          Length = 168

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 371 CSCLVSGGVVIVNCSSFSFITSC-QFWTAYV 282
           C+C  SG    VN S+F ++T C  FW A V
Sbjct: 76  CTCSDSGTYAFVNPSNFGYVTLCGAFWNAPV 106

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>ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII subunit A2|
           (Elongin A2) (EloA2) (Transcription elongation factor B
           polypeptide 3B)
          Length = 753

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 25/88 (28%), Positives = 36/88 (40%)
 Frame = -1

Query: 625 KAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHR 446
           K ++R   K   + LEK  +K  A P            A   I KTVK    H++ GD  
Sbjct: 13  KLQVRLATKTEPKKLEKYLQKLSALPMTADIL------AETGIRKTVKRLRKHQHVGDFA 66

Query: 445 KSRLARRKKAIEIIRGWYVPNAEPAAAA 362
           +   AR KK + + R       +P  +A
Sbjct: 67  RDLAARWKKLVLVDRNTRPGPQDPEESA 94

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>CP27B_RAT (O35132) 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial|
           precursor (EC 1.14.13.13) (Cytochrome P450 subfamily
           XXVIIB polypeptide 1) (Cytochrome p450 27B1) (Calcidiol
           1-monooxygenase) (25-OHD-1 alpha-hydroxylase)
           (25-hydroxyvitamin D(3) 1
          Length = 501

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = +2

Query: 338 R*QLPQKLGSCSRF-SIRNIP---TTNYLNGLLPPCKPGLAMISSIPVHGA 478
           R QLP +LGS S   S+ +IP   T ++L  L   CK GL+ +  + VHGA
Sbjct: 14  RVQLPSQLGSDSVLRSLSDIPGPSTPSFLAELF--CKGGLSRLHELQVHGA 62

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>RS20_STRAW (Q82BZ4) 30S ribosomal protein S20|
          Length = 88

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -1

Query: 613 RTRNKKVFRALEKLRKKAD--AQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRKS 440
           R RNK V  +L+   +KA   A         +    A + +DK V  G +H+N   ++KS
Sbjct: 18  RLRNKAVKSSLKTAIRKAREAAAAGDVEKATEYQRAAARQLDKAVSKGVIHKNQAANKKS 77

Query: 439 RLARR 425
            LA +
Sbjct: 78  ALASK 82

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>RS20_MYCPU (Q98PR3) 30S ribosomal protein S20|
          Length = 89

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -1

Query: 613 RTRNKKVFRALEKLRKKAD-AQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRKSR 437
           R RN  +   ++   KKA  A        +K++S+A+  I K    G  H+NT   + SR
Sbjct: 18  RKRNSMIKSRVKTSIKKAKLAITQDSDNAKKLVSDAHHEIHKAKSKGVFHKNTALRKSSR 77

Query: 436 L 434
           L
Sbjct: 78  L 78

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>RS20_LACLA (Q9CEU5) 30S ribosomal protein S20|
          Length = 77

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = -1

Query: 607 RNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDHRKSRLAR 428
           RN +   A+  L KK +A P       ++   A  +IDK    G +H N     K+RLA 
Sbjct: 20  RNAQQKSAMRTLIKKFEAAPTE-----ELYRAASSSIDKAASKGLIHANKASRDKARLAA 74

Query: 427 R 425
           +
Sbjct: 75  K 75

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>RS20_DEHSC (Q3ZZW3) 30S ribosomal protein S20|
          Length = 88

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -1

Query: 631 ARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGD 452
           A + E R    +V  +L K++K  DA          +   A   +DK  + G +H     
Sbjct: 16  ANRQENRRAKSQVKTSLTKVKKLVDAGSINEAETAAV--SAQSNLDKAAEKGIIHPKNAA 73

Query: 451 HRKSRLARR 425
            RKSRL ++
Sbjct: 74  RRKSRLMKK 82

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>RS20_BARHE (Q6G527) 30S ribosomal protein S20|
          Length = 88

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = -1

Query: 628 RKAEMRTRNKKVFRALEK--LRKKADAQPXXXXXXEKMISEAYKA-IDKTVKVGAMHRNT 458
           RK   RT+  +  R+  +  +RK  DA         ++  + ++  I + V  G  H+N 
Sbjct: 12  RKVAARTQVNRARRSRVRTFMRKFDDALAGGDRASAEVAFKNFEPEIMRAVSKGVFHKNA 71

Query: 457 GDHRKSRLARRKKAIEI 407
              + SRLA+R KA+ +
Sbjct: 72  AARKVSRLAKRLKALSV 88

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>RS20_BACTN (Q8A276) 30S ribosomal protein S20|
          Length = 84

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = -1

Query: 628 RKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNTGDH 449
           R+   R   K +  A+ KLR   D +         M     K +DK  K   +H+N  ++
Sbjct: 17  RRLHNRYYGKTMRNAVRKLRATTDKKEAVA-----MYPGITKMLDKLAKTNVIHKNKANN 71

Query: 448 RKSRLA 431
            KS+LA
Sbjct: 72  LKSKLA 77

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>HMDH_SCHMA (P16237) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC|
           1.1.1.34) (HMG-CoA reductase)
          Length = 948

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -2

Query: 168 LLVLHSSVVKLQTEIYLLYGVCSYLQLEIICSV*MLSLITFSHCEMNMYLSHLFS 4
           + +L +SV  L +++ + + V  Y  LEI        L+ + H + +  LSHLFS
Sbjct: 119 IFLLSTSVFLLFSDLSVFFIVLEYYLLEI-------ELVNYEHAKRHCLLSHLFS 166

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>RS20_LEIXX (Q6AEB3) 30S ribosomal protein S20|
          Length = 86

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N A K+E++T      RA  +     D +          +  A K +DK    G +H+N 
Sbjct: 21  NKAVKSELKT----AIRATREAVATGDKEKASSA-----LRLASKKLDKAASKGVIHKNQ 71

Query: 457 GDHRKSRLARRKKAI 413
             +RKS +A++  A+
Sbjct: 72  AANRKSAIAKQVAAL 86

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>RS20_LEGPL (Q5WTG3) 30S ribosomal protein S20|
          Length = 88

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + ++  RT  K V +A+E   ++A              ++A   IDK    G +H+N 
Sbjct: 21  NASARSMYRTYIKNVLKAVESGDQEA---------ARAAYTKAQPVIDKAANKGLIHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               K RL  R KA+
Sbjct: 72  AARIKGRLVARLKAM 86

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>RS20_LEGPH (Q5ZS83) 30S ribosomal protein S20|
          Length = 88

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + ++  RT  K V +A+E   ++A              ++A   IDK    G +H+N 
Sbjct: 21  NASARSMYRTYIKNVLKAVESGDQEA---------ARAAYTKAQPVIDKAANKGLIHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               K RL  R KA+
Sbjct: 72  AARIKGRLVARLKAM 86

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>RS20_LEGPA (Q5X1Q4) 30S ribosomal protein S20|
          Length = 88

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = -1

Query: 637 NHARKAEMRTRNKKVFRALEKLRKKADAQPXXXXXXEKMISEAYKAIDKTVKVGAMHRNT 458
           N + ++  RT  K V +A+E   ++A              ++A   IDK    G +H+N 
Sbjct: 21  NASARSMYRTYIKNVLKAVESGDQEA---------ARAAYTKAQPVIDKAANKGLIHKNK 71

Query: 457 GDHRKSRLARRKKAI 413
               K RL  R KA+
Sbjct: 72  AARIKGRLVARLKAM 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,548,666
Number of Sequences: 219361
Number of extensions: 2030247
Number of successful extensions: 5111
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 4885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5099
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result