>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)|
           (Fertility restorer) (Restorer for CMS)
          Length = 791

 Score = 35.0 bits (79), Expect(2) = 0.020
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = -2

Query: 542 STPWLETTHLLLENFAEIGDLENAKKVFAELNESKYCRNSFVYNTILKAYVKAKVCEP-- 369
           S P + +   ++  F + GD + A   + E+ +     +   YN+I+ A  KA+  +   
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 368 DFVKTMILGGAMPDAETHS 312
           + + TM+  G MPD  T++
Sbjct: 252 EVLNTMVKNGVMPDCMTYN 270



 Score = 22.3 bits (46), Expect(2) = 0.020
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 684 MRASGCQPNAITYRHLAIGLLESRSCETSCE 592
           M   GC PN  +Y  L  GL +    + + E
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALE 179

>Y4791_ARATH (P0C043) Hypothetical PPR-repeat protein At4g17915|
          Length = 463

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -2

Query: 536 PWLETTHLLLENFAEIGDLENAKKVFAELNESKYCRNSFVYNTILKAYVKAK 381
           P L T ++L+    +   +  AK +  EL +S Y  N+  Y TILK Y K +
Sbjct: 186 PELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTR 237

>CEP70_MOUSE (Q6IQY5) Centrosomal protein of 70 kDa (Cep70 protein)|
          Length = 616

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 20/60 (33%), Positives = 34/60 (56%)
 Frame = -2

Query: 623 LKAGLVKQAVNTMNMGREEVVTRKVKSSTPWLETTHLLLENFAEIGDLENAKKVFAELNE 444
           +K G +   V+TM    EEV  +K  SSTP  +T   ++ +F ++ D+++   VF  +NE
Sbjct: 454 VKVGDLLFMVDTM---LEEVENQKETSSTPNSQTLQAIVSHFQKLFDVQSLNGVFPRMNE 510

>MERA_SHIFL (P08332) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)|
          Length = 564

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 14/55 (25%), Positives = 32/55 (58%)
 Frame = -2

Query: 632 LGCLKAGLVKQAVNTMNMGREEVVTRKVKSSTPWLETTHLLLENFAEIGDLENAK 468
           +GC+ + ++ +A +  ++ RE      + ++TP ++ T LL +  A + +L +AK
Sbjct: 138 VGCVPSKIMIRAAHIAHLRRESPFDGGIAATTPTIQRTALLAQQQARVDELRHAK 192

>PSF2_SCHPO (O94329) Probable DNA replication complex GINS protein psf2|
          Length = 183

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = -2

Query: 575 REEVVTRKVKSSTP--WLETTHLLLENFA--EIGDLENAKKVFAELNESK 438
           R++ +  +  S  P  WLET HLLL NF   +I D+E+ +++  ++ E++
Sbjct: 85  RDDELENETFSELPFRWLETAHLLL-NFCADDIEDVEDIRRILLDIREAR 133

>SYFB_MOOTA (Q2RHN8) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 803

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 617 AGLVKQAVNTMNMGREEVVTRKVKSSTPWLETTHLLLEN 501
           AGL  + V  +  G ++VV  K+K+ TP  +  HL++ N
Sbjct: 28  AGLAVEGVEDLTPGFQKVVAGKIKTITPHPDADHLVICN 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,313,189
Number of Sequences: 219361
Number of extensions: 2098776
Number of successful extensions: 5475
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5472
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)