>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7)|
            (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
 Frame = -3

Query: 455  KSLPIMVFSTDEASNKAVIYAGVPPDAPNGFKVLD---WLTPSIAPXXXXXXXXXXXXXX 285
            K + IMVFSTDE++NKAV+ AGV P+  + FK LD   WLT ++ P              
Sbjct: 920  KGMSIMVFSTDESTNKAVVCAGV-PEKSDQFKPLDVTEWLTTALGPLKGRCGKGKGGLAS 978

Query: 284  XXGSDASRVKEAMELATQIASMKL 213
              G+DAS+V+ A+++A+  ASMKL
Sbjct: 979  GQGTDASQVQAALDMASSFASMKL 1002

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
 Frame = -2

Query: 396 CRRTSGCTQWLQGVGLAYTFNRTTQGKRRRRQEWSCPGP-------GK*CFSGQGGNGAC 238
           C  +SG     +G G   + +R  Q  RRR Q  SC G        G  C    GG+G C
Sbjct: 52  CGSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111

Query: 237 Y 235
           +
Sbjct: 112 H 112

>DHSD_MOUSE (Q9CXV1) Succinate dehydrogenase [ubiquinone] cytochrome b small|
           subunit, mitochondrial precursor (CybS)
           (Succinate-ubiquinone reductase membrane anchor subunit)
           (QPs3) (CII-4) (Succinate dehydrogenase complex subunit
           D) (Succinate-ubiquinone
          Length = 159

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -1

Query: 409 RLLYMPAYLRMHPMASRCWIG-LHLQ-SHHSREEEAAARMVLPRAREVMLLG 260
           R  Y+ A+L+  P   RC    +HL  SHHS  + A+      R   V+LLG
Sbjct: 27  RPAYVSAFLQDQPTQGRCGTQHIHLSPSHHSGSKAASLHWTSERVVSVLLLG 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,019,849
Number of Sequences: 219361
Number of extensions: 1292901
Number of successful extensions: 2867
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2864
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)