ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| basd2k17 | 626 | AV922862 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2k16 | 580 | AV922861 | not_full | gb|AY105832.1| Zea mays PCO064594 mRNA sequence Length = 1366 | 298 | not_full | NEK4_MOUSE (Q9Z1J2) Serine/threonine-protein kinase Nek4 (EC 2.7.11.1) (NimA-related protein kinase 4) (Serine/threonine-protein kinase 2) Length = 792 | 500 | -- | --- | - | -- | --- | - |
| basd2k15 | 563 | AV922860 | not_full | gb|AY137513.1| Hordeum vulgare subsp. vulgare hypersensitive-induced reaction protein 3 mRNA, complete cds Length = 1324 | 123 | not_full | PLZ12_LUPPO (P16148) Protein PPLZ12 Length = 184 | 26 | -- | --- | - | -- | --- | - |
| basd2k14 | 130 | AV836255 | not_full | gb|BC046697.1| Xenopus laevis protein kinase, cAMP-dependent, catalytic, beta, mRNA (cDNA clone MGC:53163 IMAGE:5542857), complete cds Length = 3408 | 148 | not_full | KAPCA_CANFA (Q8MJ44) cAMP-dependent protein kinase, alpha-catalytic subunit (EC 2.7.11.11) (PKA C-alpha) Length = 349 | 160 | -- | --- | - | -- | --- | - |
| basd2k13 | 574 | AV922859 | not_full | gb|AY103979.1| Zea mays PCO072809 mRNA sequence Length = 2220 | 262 | not_full | SYK_ORYSA (Q6F2U9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) Length = 602 | 129 | -- | --- | - | -- | --- | - |
| basd2k12 | 478 | AV922858 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2k11 | 584 | AV922857 | not_full | gb|M95500.1|WHTWIR1APR Wheat WIR1A gene, complete cds Length = 842 | 11 | not_full | WIR1A_WHEAT (Q01482) WIR1A protein Length = 88 | 18 | -- | --- | - | -- | --- | - |
| basd2k09 | 367 | AV836254 | not_full | gb|BC097920.1| Xenopus laevis cDNA clone MGC:115724 IMAGE:6868334, complete cds Length = 942 | 8 | not_full | Y773_LISIN (Q92DP0) UPF0266 membrane protein lin0773 Length = 155 | 11 | -- | --- | - | -- | --- | - |
| basd2k07 | 310 | AV922856 | not_full | gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 | 261 | not_full | PI5K1_ORYSA (Q6EX42) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) Length = 801 | 20 | -- | --- | - | -- | --- | - |
| basd2k06 | 409 | AV922855 | not_full | gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 | 375 | not_full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 236 | -- | --- | - | -- | --- | - |
| basd2k05 | 573 | AV922854 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 392 | not_full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 155 | -- | --- | - | -- | --- | - |
| basd2k04 | 613 | AV922853 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | POF13_SCHPO (O94334) F-box protein pof13 Length = 396 | 4 | -- | --- | - | -- | --- | - |
| basd2k01 | 214 | AV836253 | not_full | ref|XM_507134.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1066_B03.125 mRNA Length = 3327 | 17 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2j23 | 595 | AV922852 | not_full | dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 | 134 | not_full | ERVB_TABDI (P60994) Ervatamin-B (EC 3.4.22.-) (ERV-B) Length = 215 | 205 | -- | --- | - | -- | --- | - |
| basd2j22 | 558 | AV922851 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 3 | -- | --- | - | -- | --- | - |
| basd2j21 | 584 | AV922850 | full | gb|BT009573.1| Triticum aestivum clone wre1n.pk0027.d4:fis, full insert mRNA sequence Length = 1042 | 66 | not_full | TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin) Length = 2365 | 10 | -- | --- | - | -- | --- | - |
| basd2j19 | 446 | AV922849 | not_full | gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence Length = 2997 | 138 | not_full | PLDA1_MAIZE (Q43270) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 | 43 | -- | --- | - | -- | --- | - |
| basd2j18 | 563 | AV922848 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2j17 | 592 | AV922847 | full | gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 | 405 | not_full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 109 | -- | --- | - | -- | --- | - |
| basd2j15 | 384 | AV922846 | not_full | gb|AY781348.1| Triticum aestivum USP family protein mRNA, complete cds Length = 902 | 25 | not_full | PPSA_AERPE (Q9YEC5) Phosphoenolpyruvate synthase (EC 2.7.9.2) (Pyruvate, water dikinase) (PEP synthase) Length = 845 | 3 | -- | --- | - | -- | --- | - |
| basd2j14 | 657 | AV922845 | not_full | gb|AY108613.1| Zea mays PCO091786 mRNA sequence Length = 597 | 500 | not_full | VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B) Length = 588 | 8 | -- | --- | - | -- | --- | - |
| basd2j12 | 519 | AV922844 | not_full | gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence Length = 212387 | 500 | not_full | GFRA4_CHICK (O93512) GDNF family receptor alpha-4 precursor (GFR-alpha-4) Length = 431 | 4 | -- | --- | - | -- | --- | - |
| basd2j11 | 549 | AV922843 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 142 | not_full | MLC2_DROME (P54357) Myosin-2 essential light chain (Myosin II essential light chain) (Nonmuscle myosin essential light chain) Length = 147 | 61 | -- | --- | - | -- | --- | - |
| basd2j09 | 217 | AV922842 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO GRAVITY) (AtARG1) (AtJ15) (AtDjB15) Length = 410 | 1 | -- | --- | - | -- | --- | - |
| basd2j08 | 472 | AV836252 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 40 | not_full | ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating protein) Length = 594 | 379 | -- | --- | - | -- | --- | - |
| basd2j07 | 427 | AV922841 | not_full | gb|AC006464.3| Homo sapiens BAC clone RP11-436C12 from 2, complete sequence Length = 99908 | 75 | not_full | YE25_CAEEL (Q20593) Hypothetical protein F49C12.5 Length = 507 | 18 | -- | --- | - | -- | --- | - |
| basd2j06 | 582 | AV922840 | not_full | gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence Length = 1457 | 144 | not_full | CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments) Length = 1262 | 22 | -- | --- | - | -- | --- | - |
| basd2j05 | 671 | AV836251 | not_full | ref|XM_469034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2662 | 57 | not_full | CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) Length = 753 | 139 | -- | --- | - | -- | --- | - |
| basd2j04 | 610 | AV922839 | not_full | ref|NM_183790.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1551 | 109 | not_full | BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1) (Brassinosteroid LRR receptor kinase) Length = 1207 | 460 | -- | --- | - | -- | --- | - |
| basd2j03 | 477 | AV836250 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 186 | not_full | ABFA_STRLI (P53627) Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Arabinosidase) (ABF) (Alpha-L-AF) Length = 662 | 20 | -- | --- | - | -- | --- | - |
| basd2j02 | 127 | AV922838 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 394 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| basd2j01 | 425 | AV922837 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 37 | not_full | CPC_ARATH (O22059) Transcription factor CAPRICE Length = 94 | 51 | -- | --- | - | -- | --- | - |
| basd2i23 | 610 | AV922836 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2i22 | 531 | AV922835 | not_full | ref|NM_195360.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0003P07.17), mRNA Length = 3513 | 32 | not_full | SECF_MYCLE (P38386) Protein-export membrane protein secF Length = 471 | 1 | -- | --- | - | -- | --- | - |
| basd2i21 | 580 | AV922834 | full | gb|BT009573.1| Triticum aestivum clone wre1n.pk0027.d4:fis, full insert mRNA sequence Length = 1042 | 70 | not_full | TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin) Length = 2365 | 5 | -- | --- | - | -- | --- | - |
| basd2i20 | 400 | AV836249 | not_full | ref|XM_473840.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 | 25 | not_full | Y1728_MYCBO (P64886) Hypothetical protein Rv1792c/MT1741/Mb1728c Length = 454 | 12 | -- | --- | - | -- | --- | - |
| basd2i19 | 615 | AV922833 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd2i18 | 617 | AV836248 | not_full | ref|XM_467717.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 | 111 | not_full | DNJ16_ARATH (Q8VXV4) Chaperone protein dnaJ 16 (Protein ARG1-LIKE1) (AtARL1) (AtJ16) (AtDjB16) Length = 436 | 452 | -- | --- | - | -- | --- | - |
| basd2i17 | 563 | AV922832 | not_full | ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15 mRNA Length = 1000 | 106 | not_full | ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein At1g12440 Length = 168 | 24 | -- | --- | - | -- | --- | - |
| basd2i15 | 496 | AV836247 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 63 | not_full | RAD9B_HUMAN (Q6WBX8) Cell cycle checkpoint control protein RAD9B homolog (RAD9 homolog B) (hRAD9B) Length = 414 | 28 | -- | --- | - | -- | --- | - |
| basd2i14 | 387 | AV922831 | not_full | gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 | 23 | not_full | CK5P1_ARATH (Q8H0V1) CDK5RAP1-like protein Length = 640 | 54 | -- | --- | - | -- | --- | - |
| basd2i13 | 288 | AV922830 | not_full | ref|NM_193473.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 | 84 | not_full | CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger 1a) (OsCAX1a) Length = 451 | 12 | -- | --- | - | -- | --- | - |
| basd2i12 | 578 | AV922829 | full | gb|AF446052.1|AF446051S2 Hordeum vulgare Rpl16 (rpl16) gene, exon 2 and partial cds; chloroplast genes for chloroplast products Length = 406 | 500 | full | RK16_VIGUN (P42353) Chloroplast 50S ribosomal protein L16 (Fragment) Length = 137 | 297 | -- | --- | - | -- | --- | - |
| basd2i11 | 610 | AV836246 | not_full | emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in linkage group 20, complete sequence Length = 207204 | 67 | not_full | ZN384_HUMAN (Q8TF68) Zinc finger protein 384 (Nuclear matrix transcription factor 4) (Nuclear matrix protein 4) (CAG repeat protein 1) (CAS-interacting zinc finger protein) Length = 576 | 3 | -- | --- | - | -- | --- | - |
| basd2i08 | 458 | AV922828 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 40 | not_full | CPC_ARATH (O22059) Transcription factor CAPRICE Length = 94 | 47 | -- | --- | - | -- | --- | - |
| basd2i07 | 218 | AV922827 | not_full | ref|XM_472398.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1035 | 47 | not_full | HE_PARLI (P22757) Hatching enzyme precursor (EC 3.4.24.12) (HE) (HEZ) (Envelysin) (Sea-urchin-hatching proteinase) [Contains: Hatching enzyme 18 kDa form] Length = 587 | 38 | -- | --- | - | -- | --- | - |
| basd2i06 | 588 | AV922826 | not_full | emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA Length = 705 | 500 | not_full | NLT41_HORVU (Q43767) Nonspecific lipid-transfer protein 4.1 precursor (LTP 4.1) (CW21) (CW-21) Length = 115 | 78 | -- | --- | - | -- | --- | - |
| basd2i05 | 899 | AV922825 | not_full | gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 | 500 | full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 168 | -- | --- | - | -- | --- | - |
| basd2i04 | 284 | AV922824 | not_full | ref|XM_467507.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2595 | 46 | not_full | PTM1_YEAST (P32857) Protein PTM1 precursor Length = 531 | 3 | -- | --- | - | -- | --- | - |
| basd2i03 | 326 | AV922823 | -- | --- | 0 | not_full | HMOC_DROME (P22810) Homeotic protein ocelliless (Protein orthodenticle) Length = 671 | 4 | -- | --- | - | -- | --- | - |
