ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2i17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15 mRNA Length = 1000 Score = 252 bits (127), Expect = 1e-63 Identities = 178/195 (91%) Strand = Plus / Plus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 |||||||||||||||||| || ||||||||||| |||||||||||||| ||| | ||||| Sbjct: 160 gatggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataa 219 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 220 ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagat 279 Query: 200 ggtcatgaaggaggaacaggccaagctggctgcctcctcctttgatagcattgttaacgg 259 | ||||||||||||| ||||||||||| |||||||||||| | ||||||||||| || || Sbjct: 280 gatcatgaaggaggagcaggccaagcttgctgcctcctccatcgatagcattgtcaatgg 339 Query: 260 tggcgacggtgggaa 274 | | ||||||||||| Sbjct: 340 ttgtgacggtgggaa 354 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 412 aaggaggggccgaatcggtgctcaacttgcaggaagagggttgggctaacgggattcaac 471 ||||| |||||||| |||||| | || || ||||||||||||||||| |||||||||||| Sbjct: 482 aaggaagggccgaaccggtgcgctacctgtaggaagagggttgggctgacgggattcaac 541 Query: 472 tgcagatgcggtaacatgtactgttcgctgcaccgctattccgacaagcatgactgccag 531 ||| | |||||||||||||||||| || |||||||||| |||||||||||||| |||||| Sbjct: 542 tgccggtgcggtaacatgtactgtgcgttgcaccgctactccgacaagcatgaatgccag 601 Query: 532 ttcgactaccggactgcagctagggatgccat 563 ||||||||||||||||| |||||||||||||| Sbjct: 602 ttcgactaccggactgcggctagggatgccat 633
>ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 991 Score = 252 bits (127), Expect = 1e-63 Identities = 178/195 (91%) Strand = Plus / Plus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 |||||||||||||||||| || ||||||||||| |||||||||||||| ||| | ||||| Sbjct: 143 gatggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataa 202 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 203 ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagat 262 Query: 200 ggtcatgaaggaggaacaggccaagctggctgcctcctcctttgatagcattgttaacgg 259 | ||||||||||||| ||||||||||| |||||||||||| | ||||||||||| || || Sbjct: 263 gatcatgaaggaggagcaggccaagcttgctgcctcctccatcgatagcattgtcaatgg 322 Query: 260 tggcgacggtgggaa 274 | | ||||||||||| Sbjct: 323 ttgtgacggtgggaa 337 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 412 aaggaggggccgaatcggtgctcaacttgcaggaagagggttgggctaacgggattcaac 471 ||||| |||||||| |||||| | || || ||||||||||||||||| |||||||||||| Sbjct: 465 aaggaagggccgaaccggtgcgctacctgtaggaagagggttgggctgacgggattcaac 524 Query: 472 tgcagatgcggtaacatgtactgttcgctgcaccgctattccgacaagcatgactgccag 531 ||| | |||||||||||||||||| || |||||||||| |||||||||||||| |||||| Sbjct: 525 tgccggtgcggtaacatgtactgtgcgttgcaccgctactccgacaagcatgaatgccag 584 Query: 532 ttcgactaccggactgcagctagggatgccat 563 ||||||||||||||||| |||||||||||||| Sbjct: 585 ttcgactaccggactgcggctagggatgccat 616
>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full insert sequence Length = 991 Score = 252 bits (127), Expect = 1e-63 Identities = 178/195 (91%) Strand = Plus / Plus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 |||||||||||||||||| || ||||||||||| |||||||||||||| ||| | ||||| Sbjct: 143 gatggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataa 202 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 203 ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagat 262 Query: 200 ggtcatgaaggaggaacaggccaagctggctgcctcctcctttgatagcattgttaacgg 259 | ||||||||||||| ||||||||||| |||||||||||| | ||||||||||| || || Sbjct: 263 gatcatgaaggaggagcaggccaagcttgctgcctcctccatcgatagcattgtcaatgg 322 Query: 260 tggcgacggtgggaa 274 | | ||||||||||| Sbjct: 323 ttgtgacggtgggaa 337 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 412 aaggaggggccgaatcggtgctcaacttgcaggaagagggttgggctaacgggattcaac 471 ||||| |||||||| |||||| | || || ||||||||||||||||| |||||||||||| Sbjct: 465 aaggaagggccgaaccggtgcgctacctgtaggaagagggttgggctgacgggattcaac 524 Query: 472 tgcagatgcggtaacatgtactgttcgctgcaccgctattccgacaagcatgactgccag 531 ||| | |||||||||||||||||| || |||||||||| |||||||||||||| |||||| Sbjct: 525 tgccggtgcggtaacatgtactgtgcgttgcaccgctactccgacaagcatgaatgccag 584 Query: 532 ttcgactaccggactgcagctagggatgccat 563 ||||||||||||||||| |||||||||||||| Sbjct: 585 ttcgactaccggactgcggctagggatgccat 616
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 252 bits (127), Expect = 1e-63 Identities = 178/195 (91%) Strand = Plus / Minus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 |||||||||||||||||| || ||||||||||| |||||||||||||| ||| | ||||| Sbjct: 5346558 gatggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataa 5346499 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 5346498 ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagat 5346439 Query: 200 ggtcatgaaggaggaacaggccaagctggctgcctcctcctttgatagcattgttaacgg 259 | ||||||||||||| ||||||||||| |||||||||||| | ||||||||||| || || Sbjct: 5346438 gatcatgaaggaggagcaggccaagcttgctgcctcctccatcgatagcattgtcaatgg 5346379 Query: 260 tggcgacggtgggaa 274 | | ||||||||||| Sbjct: 5346378 ttgtgacggtgggaa 5346364 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 412 aaggaggggccgaatcggtgctcaacttgcaggaagagggttgggctaacgggattcaac 471 ||||| |||||||| |||||| | || || ||||||||||||||||| |||||||||||| Sbjct: 5346236 aaggaagggccgaaccggtgcgctacctgtaggaagagggttgggctgacgggattcaac 5346177 Query: 472 tgcagatgcggtaacatgtactgttcgctgcaccgctattccgacaagcatgactgccag 531 ||| | |||||||||||||||||| || |||||||||| |||||||||||||| |||||| Sbjct: 5346176 tgccggtgcggtaacatgtactgtgcgttgcaccgctactccgacaagcatgaatgccag 5346117 Query: 532 ttcgactaccggactgcagctagggatgccat 563 ||||||||||||||||| |||||||||||||| Sbjct: 5346116 ttcgactaccggactgcggctagggatgccat 5346085
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 252 bits (127), Expect = 1e-63 Identities = 178/195 (91%) Strand = Plus / Minus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 |||||||||||||||||| || ||||||||||| |||||||||||||| ||| | ||||| Sbjct: 72861 gatggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataa 72802 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 72801 ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagat 72742 Query: 200 ggtcatgaaggaggaacaggccaagctggctgcctcctcctttgatagcattgttaacgg 259 | ||||||||||||| ||||||||||| |||||||||||| | ||||||||||| || || Sbjct: 72741 gatcatgaaggaggagcaggccaagcttgctgcctcctccatcgatagcattgtcaatgg 72682 Query: 260 tggcgacggtgggaa 274 | | ||||||||||| Sbjct: 72681 ttgtgacggtgggaa 72667 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 412 aaggaggggccgaatcggtgctcaacttgcaggaagagggttgggctaacgggattcaac 471 ||||| |||||||| |||||| | || || ||||||||||||||||| |||||||||||| Sbjct: 72539 aaggaagggccgaaccggtgcgctacctgtaggaagagggttgggctgacgggattcaac 72480 Query: 472 tgcagatgcggtaacatgtactgttcgctgcaccgctattccgacaagcatgactgccag 531 ||| | |||||||||||||||||| || |||||||||| |||||||||||||| |||||| Sbjct: 72479 tgccggtgcggtaacatgtactgtgcgttgcaccgctactccgacaagcatgaatgccag 72420 Query: 532 ttcgactaccggactgcagctagggatgccat 563 ||||||||||||||||| |||||||||||||| Sbjct: 72419 ttcgactaccggactgcggctagggatgccat 72388
>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full insert sequence Length = 1000 Score = 252 bits (127), Expect = 1e-63 Identities = 178/195 (91%) Strand = Plus / Plus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 |||||||||||||||||| || ||||||||||| |||||||||||||| ||| | ||||| Sbjct: 160 gatggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataa 219 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 220 ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagat 279 Query: 200 ggtcatgaaggaggaacaggccaagctggctgcctcctcctttgatagcattgttaacgg 259 | ||||||||||||| ||||||||||| |||||||||||| | ||||||||||| || || Sbjct: 280 gatcatgaaggaggagcaggccaagcttgctgcctcctccatcgatagcattgtcaatgg 339 Query: 260 tggcgacggtgggaa 274 | | ||||||||||| Sbjct: 340 ttgtgacggtgggaa 354 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 412 aaggaggggccgaatcggtgctcaacttgcaggaagagggttgggctaacgggattcaac 471 ||||| |||||||| |||||| | || || ||||||||||||||||| |||||||||||| Sbjct: 482 aaggaagggccgaaccggtgcgctacctgtaggaagagggttgggctgacgggattcaac 541 Query: 472 tgcagatgcggtaacatgtactgttcgctgcaccgctattccgacaagcatgactgccag 531 ||| | |||||||||||||||||| || |||||||||| |||||||||||||| |||||| Sbjct: 542 tgccggtgcggtaacatgtactgtgcgttgcaccgctactccgacaagcatgaatgccag 601 Query: 532 ttcgactaccggactgcagctagggatgccat 563 ||||||||||||||||| |||||||||||||| Sbjct: 602 ttcgactaccggactgcggctagggatgccat 633
>gb|AY105966.1| Zea mays PCO143261 mRNA sequence Length = 1035 Score = 238 bits (120), Expect = 2e-59 Identities = 183/204 (89%) Strand = Plus / Plus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 ||||||||||||||||||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct: 89 gatggaacacaaggaggcgggctgccagcagccggagggcccaatcctatgcatcaataa 148 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 149 ctgcggcttcttcggcagtgctgcgacgatgaacatgtgctccaagtgccacaaggagat 208 Query: 200 ggtcatgaaggaggaacaggccaagctggctgcctcctcctttgatagcattgttaacgg 259 | | | |||| |||| |||||| ||||||||||||||||| | ||||||||||| || || Sbjct: 209 gataacgaagcaggagcaggcccagctggctgcctcctccatcgatagcattgtcaatgg 268 Query: 260 tggcgacggtgggaaagcacctgt 283 || ||||| ||||||| |||||| Sbjct: 269 cggtgacggcgggaaaggacctgt 292 Score = 133 bits (67), Expect = 7e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 439 tgcaggaagagggttgggctaacgggattcaactgcagatgcggtaacatgtactgttcg 498 ||||||||| | |||||||| |||||||| | |||| ||||||| ||||||||||||||| Sbjct: 432 tgcaggaagcgtgttgggctgacgggatttagctgccgatgcgggaacatgtactgttcg 491 Query: 499 ctgcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctaggga 557 |||||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 492 gtgcaccgctactccgacaaacatgactgtcagttcgactatcggactgcagcaaggga 550
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 196 bits (99), Expect = 5e-47 Identities = 126/135 (93%) Strand = Plus / Minus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 |||||||||||||||||| || ||||||||||| |||||||||||||| ||| | ||||| Sbjct: 139 gatggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataa 80 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 79 ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagat 20 Query: 200 ggtcatgaaggagga 214 | ||||||||||||| Sbjct: 19 gatcatgaaggagga 5
>gb|AY105867.1| Zea mays PCO143262 mRNA sequence Length = 984 Score = 194 bits (98), Expect = 2e-46 Identities = 155/174 (89%) Strand = Plus / Plus Query: 80 gatggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataa 139 |||||||||||||||||| || ||||||||||| |||||||||||||||||| | ||||| Sbjct: 88 gatggaacacaaggaggccggctgccagcagccggagggcccaatcctatgcatcaataa 147 Query: 140 ctgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagat 199 ||| || |||||||| || || || ||||||||||||||||||||||||||||||||||| Sbjct: 148 ctgtggtttctttggaagcgctgccaccatgaacatgtgctccaagtgccacaaggagat 207 Query: 200 ggtcatgaaggaggaacaggccaagctggctgcctcctcctttgatagcattgt 253 | | |||||| |||| |||||| || |||||||||||||| | ||||||||||| Sbjct: 208 gataatgaagcaggagcaggcccagttggctgcctcctccatcgatagcattgt 261 Score = 117 bits (59), Expect = 4e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 427 cggtgctcaacttgcaggaagagggttgggctaacgggattcaactgcagatgcggtaac 486 |||||| |||| || |||||| | |||||| | ||||| || |||||| ||||||| ||| Sbjct: 419 cggtgcgcaacctgtaggaagcgtgttgggttgacgggttttaactgccgatgcgggaac 478 Query: 487 atgtactgttcgctgcaccgctattccgacaagcatgactgccagttcgactaccggact 546 | |||||||||| |||||||||| |||||||| || ||||||||||||||||| || ||| Sbjct: 479 acgtactgttcgatgcaccgctactccgacaaacacgactgccagttcgactatcgaact 538 Query: 547 gcagctaggga 557 ||||||||||| Sbjct: 539 gcagctaggga 549
>gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G81 mRNA sequence Length = 449 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 56 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 115 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 116 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 175 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 176 ataatgaagcaggagcaggccaagctggcagcctcctc 213 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 356 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 415 Query: 457 ctaacgggattcaactgcagatg 479 || || |||||||||||| |||| Sbjct: 416 cttaccggattcaactgccgatg 438 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 271 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 326
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 24109406 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 24109465 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 24109466 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 24109525 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 24109526 ataatgaagcaggagcaggccaagctggcagcctcctc 24109563 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 24109706 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 24109765 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 24109766 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 24109825 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 24109826 aagcatgactgccagtttgactatcggaccgctgctagggatgc 24109869 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 24109621 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 24109676
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 42864 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 42923 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 42924 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 42983 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 42984 ataatgaagcaggagcaggccaagctggcagcctcctc 43021 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 43164 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 43223 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 43224 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 43283 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 43284 aagcatgactgccagtttgactatcggaccgctgctagggatgc 43327 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 43079 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 43134
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 119099 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 119158 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 119159 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 119218 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 119219 ataatgaagcaggagcaggccaagctggcagcctcctc 119256 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 119399 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 119458 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 119459 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 119518 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 119519 aagcatgactgccagtttgactatcggaccgctgctagggatgc 119562 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 119314 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 119369
>dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D03, full insert sequence Length = 999 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 150 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 209 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 210 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 269 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 270 ataatgaagcaggagcaggccaagctggcagcctcctc 307 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 450 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 509 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 510 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 569 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 570 aagcatgactgccagtttgactatcggaccgctgctagggatgc 613 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 365 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 420
>dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A12, full insert sequence Length = 1009 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 150 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 209 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 210 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 269 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 270 ataatgaagcaggagcaggccaagctggcagcctcctc 307 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 450 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 509 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 510 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 569 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 570 aagcatgactgccagtttgactatcggaccgctgctagggatgc 613 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 365 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 420
>dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C11, full insert sequence Length = 1000 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 151 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 210 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 211 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 270 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 271 ataatgaagcaggagcaggccaagctggcagcctcctc 308 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 451 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 510 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 511 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 570 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 571 aagcatgactgccagtttgactatcggaccgctgctagggatgc 614 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 366 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 421
>dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026K20, full insert sequence Length = 1209 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 148 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 207 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 208 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 267 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 268 ataatgaagcaggagcaggccaagctggcagcctcctc 305 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 448 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 507 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 508 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 567 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 568 aagcatgactgccagtttgactatcggaccgctgctagggatgc 611 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 363 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 418
>dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C08, full insert sequence Length = 1021 Score = 178 bits (90), Expect = 1e-41 Identities = 141/158 (89%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||||| ||||| ||||| ||| | |||||| Sbjct: 147 atggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatcaataac 206 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 207 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 266 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 267 ataatgaagcaggagcaggccaagctggcagcctcctc 304 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 447 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 506 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 507 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 566 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 567 aagcatgactgccagtttgactatcggaccgctgctagggatgc 610 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 362 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 417
>gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3 (SAP-3) mRNA, complete cds Length = 1132 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||| | || |||||||||||| | ||||| ||||| ||| | |||||| Sbjct: 61 atggagcacaaggagactggatgccagcagccaaaaggcccgatcctttgcatcaataac 120 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 121 tgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaaggagatg 180 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | |||||| |||| |||||||||||||| |||||||| Sbjct: 181 ataatgaagcaggagcaggccaagctggcagcctcctc 218 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 361 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 420 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 421 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 480 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 481 aagcatgactgccagtttgactatcggaccgctgctagggatgc 524 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 276 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 331
>gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complete cds Length = 1000 Score = 147 bits (74), Expect = 5e-32 Identities = 137/158 (86%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||||| || |||||| || ||||| || ||||| ||| | |||||| Sbjct: 91 atggagcacaaggaggctgggtgccaggcccccgagggacccatcctctgcatcaataac 150 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 || |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 151 tgtggcttcttcggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 210 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | | |||| |||| ||||||||||||||||||||||| Sbjct: 211 ataacgaagcaggatcaggccaagctggctgcctcctc 248 Score = 113 bits (57), Expect = 6e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 439 tgcaggaagagggttgggctaacgggattcaactgcagatgcggtaacatgtactgttcg 498 ||||||||||||||||| || ||||||||||||||| | || || ||| ||||||| | Sbjct: 442 tgcaggaagagggttggacttacgggattcaactgccggtgtgggaacttgtactgcgca 501 Query: 499 ctgcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctagggat 558 || |||||||| ||||||||||| |||||| ||||||||||||||||||| || ||||| Sbjct: 502 ctccaccgctactccgacaagcacgactgcaagttcgactaccggactgctgccagggac 561 Query: 559 gccat 563 ||||| Sbjct: 562 gccat 566
>gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, complete cds Length = 1162 Score = 147 bits (74), Expect = 5e-32 Identities = 137/158 (86%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||||| || |||||| || ||||| || ||||| ||| | |||||| Sbjct: 283 atggagcacaaggaggctgggtgccaggcccccgagggacccatcctctgcatcaataac 342 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 || |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 343 tgtggcttcttcggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 402 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | | |||| |||| ||||||||||||||||||||||| Sbjct: 403 ataacgaagcaggatcaggccaagctggctgcctcctc 440 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 439 tgcaggaagagggttgggctaacgggattcaactgcagatgcggtaacatgtactgttcg 498 |||||||| |||||||| || ||||||||||||||| | || || ||| ||||||| | Sbjct: 634 tgcaggaaaagggttggacttacgggattcaactgccggtgtgggaacttgtactgcgca 693 Query: 499 ctgcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctagggat 558 || |||||||| ||||||||||| |||||| ||||||||||||||||||| || ||||| Sbjct: 694 ctccaccgctactccgacaagcacgactgcaagttcgactaccggactgctgccagggac 753 Query: 559 gccat 563 ||||| Sbjct: 754 gccat 758
>gb|AY109331.1| Zea mays CL253_2 mRNA sequence Length = 2256 Score = 141 bits (71), Expect = 3e-30 Identities = 135/158 (85%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||||| || |||||| ||||| || ||||| ||| | |||||| Sbjct: 1087 atggagcacaaggaggctgggtgccaggnnnnngagggacccatcctctgcatcaataac 1146 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 || |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1147 tgtggcttcttcggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 1206 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | | |||| |||| ||||||||||||||||||||||| Sbjct: 1207 ataacgaagcaggatcaggccaagctggctgcctcctc 1244 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Plus Query: 439 tgcaggaagagggttgggctaacgggattcaactgcagatgcggtaacatgtactgttcg 498 |||||||||||||||||||| ||||||||||||||| | || || ||| ||||||| || Sbjct: 1438 tgcaggaagagggttgggctcacgggattcaactgccggtgtgggaacttgtactgcgcg 1497 Query: 499 ctgcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctagggat 558 || |||||||| ||||||||||| |||||| ||||||||||||||||||| || ||||| Sbjct: 1498 ctccaccgctactccgacaagcacgactgcaagttcgactaccggactgctgccagggac 1557 Query: 559 gccat 563 ||||| Sbjct: 1558 gccat 1562
>gb|BT016379.1| Zea mays clone Contig212 mRNA sequence Length = 1020 Score = 139 bits (70), Expect = 1e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 81 atggaacacaaggaggcgggttgccagcagccagagggcccaatcctatgcgttaataac 140 ||||| ||||||||||| || |||||| || ||||| || ||||| ||| | |||||| Sbjct: 107 atggagcacaaggaggctgggtgccaggcccccgagggacccatcctctgcatcaataac 166 Query: 141 tgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatg 200 || |||||||| ||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 167 tgtggcttcttcggcagcgcggcgaccatgaacatgtgctctaagtgccacaaggagatg 226 Query: 201 gtcatgaaggaggaacaggccaagctggctgcctcctc 238 | | |||| |||| ||||||||||||||||||||||| Sbjct: 227 ataacgaagcaggatcaggccaagctggctgcctcctc 264 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Plus Query: 439 tgcaggaagagggttgggctaacgggattcaactgcagatgcggtaacatgtactgttcg 498 |||||||||||||||||||| ||||||||||||||| | || || ||| ||||||| || Sbjct: 458 tgcaggaagagggttgggctcacgggattcaactgccggtgtgggaacttgtactgcgcg 517 Query: 499 ctgcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctagggat 558 || |||||||| ||||||||||| |||||| ||||||||||||||||||| || ||||| Sbjct: 518 ctccaccgctactccgacaagcacgactgcaagttcgactaccggactgctgccagggac 577 Query: 559 gccat 563 ||||| Sbjct: 578 gccat 582
>gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence Length = 779 Score = 133 bits (67), Expect = 7e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 439 tgcaggaagagggttgggctaacgggattcaactgcagatgcggtaacatgtactgttcg 498 ||||||||| | |||||||| |||||||| | |||| ||||||| ||||||||||||||| Sbjct: 120 tgcaggaagcgtgttgggctgacgggatttagctgccgatgcgggaacatgtactgttcg 179 Query: 499 ctgcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctaggga 557 |||||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 180 gtgcaccgctactccgacaaacatgactgtcagttcgactatcggactgcagcaaggga 238
>dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-F03, full insert sequence Length = 631 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 397 gtgagccccaagaggaaggaggggccgaatcggtgctcaacttgcaggaagagggttggg 456 |||| ||||||| ||| ||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 89 gtgaaccccaaggggagggaaggaccaaatcggtgctccacttgtcggaagagggttggt 148 Query: 457 ctaacgggattcaactgcagatgcggtaacatgtactgttcgctgcaccgctattccgac 516 || || |||||||||||| |||| || ||| ||||||| | |||||||||||||||| Sbjct: 149 cttaccggattcaactgccgatgtggcaacttgtactgcgcaatgcaccgctattccgat 208 Query: 517 aagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 209 aagcatgactgccagtttgactatcggaccgctgctagggatgc 252 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 309 cgctgaggtggcggttgctcaagttgacgtgaaggcactcgttgtgcagcctgctg 364 |||||| || || ||||||||||| || |||||| | || |||| ||||||||||| Sbjct: 4 cgctgaagtagctgttgctcaagtcgaggtgaagacgcttgttgcgcagcctgctg 59
>gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence Length = 941 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 439 tgcaggaagagggttgggctaacgggattcaactgcagatgcggtaacatgtactgttcg 498 |||||||||||||||||||| ||||||||||||||| | || || ||| ||||||| || Sbjct: 464 tgcaggaagagggttgggctcacgggattcaactgccggtgtgggaacttgtactgggcg 523 Query: 499 ctgcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctagggat 558 || ||||| || ||||||||||| |||||| ||||||||||||||||||| || ||||| Sbjct: 524 ctccaccggtactccgacaagcacgactgcaagttcgactaccggactgctgccagggac 583 Query: 559 gccat 563 ||||| Sbjct: 584 gccat 588 Score = 117 bits (59), Expect = 4e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 144 ggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaaggagatggtc 203 |||||||| ||||| || |||||||||||||||||||| |||||||||||||||||| | Sbjct: 176 ggcttcttcggcagcgcggcgaccatgaacatgtgctctaagtgccacaaggagatgata 235 Query: 204 atgaaggaggaacaggccaagctggctgcctcctc 238 | |||| |||| ||||||||||||||||||||||| Sbjct: 236 acgaagcaggatcaggccaagctggctgcctcctc 270
>gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82 mRNA sequence Length = 391 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 501 gcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 11 gcaccgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgc 70
>gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77 mRNA sequence Length = 391 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 501 gcaccgctattccgacaagcatgactgccagttcgactaccggactgcagctagggatgc 560 ||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 11 gcaccgctattccgataagcatgactgccagtttgactatcggaccgctgctagggatgc 70
>gb|AF139499.1|AF139499 Prunus armeniaca p85RF mRNA, complete cds Length = 1031 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 174 atgtgctccaagtgccacaaggagatggtcatgaaggaggaacaggccaagctggctgcc 233 ||||| ||||||||||||||||| ||| | |||| ||||| ||||| ||||| ||||| Sbjct: 209 atgtgttccaagtgccacaaggacatgatgttgaaagaggagcaggcaaagctcgctgca 268 Query: 234 tcctcctttg 243 || ||||||| Sbjct: 269 tcatcctttg 278
>dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45A23, TM0318, complete sequence Length = 117676 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 129 tgcgttaataactgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgc 188 ||||| ||||| || || |||||||| || || || |||||||||||||| |||||||| Sbjct: 54633 tgcgtcaataattgtggtttctttggaagggcggctaccatgaacatgtgttccaagtgt 54574 Query: 189 cacaaggagatggtcatgaaggaggaacaggccaagct 226 ||||||| ||| | ||||| |||| |||| |||||| Sbjct: 54573 tacaaggacatgctattgaagcaggagcaggacaagct 54536
>ref|XM_360295.1| Magnaporthe grisea 70-15 hypothetical protein (MG05669.4) partial mRNA Length = 2892 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 279 cctgttgttgttgcggctgtggctgctg 306 ||||||||||||||||||| |||||||| Sbjct: 541 cctgttgttgttgcggctgcggctgctg 514
>ref|NM_103998.2| Arabidopsis thaliana DNA binding / zinc ion binding AT1G51200 mRNA, complete cds Length = 1035 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 138 aactgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaagga 196 |||||||| |||||||| || || || || ||||||||||| || ||||| |||||||| Sbjct: 217 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 275
>gb|BT015115.1| Arabidopsis thaliana At1g51200 gene, complete cds Length = 522 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 138 aactgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaagga 196 |||||||| |||||||| || || || || ||||||||||| || ||||| |||||||| Sbjct: 61 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 119
>ref|XM_968474.1| PREDICTED: Tribolium castaneum similar to CG32972-PB, isoform B (LOC662374), mRNA Length = 2958 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 280 ctgttgttgttgcggctgtggctgctg 306 |||||| |||||||||||||||||||| Sbjct: 255 ctgttgctgttgcggctgtggctgctg 229
>gb|AY056445.1| Arabidopsis thaliana At1g51200/F11M15_6 mRNA, complete cds Length = 898 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 138 aactgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaagga 196 |||||||| |||||||| || || || || ||||||||||| || ||||| |||||||| Sbjct: 209 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 267
>emb|BX813820.1|CNS0AC5X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 138 aactgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaagga 196 |||||||| |||||||| || || || || ||||||||||| || ||||| |||||||| Sbjct: 133 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 191
>emb|BX841767.1|CNS09Y63 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 138 aactgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaagga 196 |||||||| |||||||| || || || || ||||||||||| || ||||| |||||||| Sbjct: 191 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 249
>gb|BT001984.1| Arabidopsis thaliana expressed protein (At1g51200) mRNA, complete cds Length = 1032 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 138 aactgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaagga 196 |||||||| |||||||| || || || || ||||||||||| || ||||| |||||||| Sbjct: 214 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 272
>gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 genomic sequence, complete sequence Length = 105807 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 138 aactgcggcttctttggcagtgccgcgaccatgaacatgtgctccaagtgccacaagga 196 |||||||| |||||||| || || || || ||||||||||| || ||||| |||||||| Sbjct: 38341 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 38399
>emb|AL805978.10| Mouse DNA sequence from clone RP23-344I3 on chromosome X, complete sequence Length = 190744 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 281 tgttgttgttgcggctgtggctgctg 306 |||||||||||| ||||||||||||| Sbjct: 148147 tgttgttgttgctgctgtggctgctg 148172
>ref|XM_636134.1| Dictyostelium discoideum hypothetical protein (DDB0206359), partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 tgttgttgttgcggctgtggctgct 305 |||||||||||| |||||||||||| Sbjct: 143 tgttgttgttgctgctgtggctgct 119
>ref|XM_507556.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.18 mRNA Length = 1185 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 129 tgcgttaataactgcggcttctttggcag 157 |||||||| ||||| |||||||||||||| Sbjct: 284 tgcgttaacaactgtggcttctttggcag 312
>ref|XM_469955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1178 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 129 tgcgttaataactgcggcttctttggcag 157 |||||||| ||||| |||||||||||||| Sbjct: 277 tgcgttaacaactgtggcttctttggcag 305
>ref|XM_507075.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.18 mRNA Length = 1204 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 129 tgcgttaataactgcggcttctttggcag 157 |||||||| ||||| |||||||||||||| Sbjct: 303 tgcgttaacaactgtggcttctttggcag 331
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 129 tgcgttaataactgcggcttctttggcag 157 |||||||| ||||| |||||||||||||| Sbjct: 72650 tgcgttaacaactgtggcttctttggcag 72678
>gb|BT014337.1| Lycopersicon esculentum clone 133610F, mRNA sequence Length = 1026 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 atgaacatgtgctccaagtgccacaagga 196 |||||||||||||| |||||| ||||||| Sbjct: 114 atgaacatgtgctcaaagtgctacaagga 142
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 129 tgcgttaataactgcggcttctttggcag 157 |||||||| ||||| |||||||||||||| Sbjct: 32671257 tgcgttaacaactgtggcttctttggcag 32671229
>gb|AC133494.4| Mus musculus BAC clone RP24-443B5 from chromosome 7, complete sequence Length = 182616 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 212 ggaacaggccaagctggctgcctcc 236 |||||||||||||||||||| |||| Sbjct: 10620 ggaacaggccaagctggctgtctcc 10644
>gb|AY377427.1| Oryza sativa (japonica cultivar-group) putative zinc finger transcription factor ZFP38 (ZFP38) mRNA, complete cds Length = 854 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 129 tgcgttaataactgcggcttctttggcag 157 |||||||| ||||| |||||||||||||| Sbjct: 92 tgcgttaacaactgtggcttctttggcag 120
>gb|AY324386.1| Homo sapiens glucose phosphate isomerase (GPI) gene, complete cds Length = 36706 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 acttgcaggaagagggttggg 456 ||||||||||||||||||||| Sbjct: 31939 acttgcaggaagagggttggg 31959
>gb|AC010066.9| Drosophila melanogaster 3L BAC RPCI98-25O1 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 176056 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 ctgttgttgttgcggctgtggctgc 304 ||||||||||||| ||||||||||| Sbjct: 64097 ctgttgttgttgctgctgtggctgc 64121
>gb|AC092073.2| Homo sapiens chromosome 19 clone RP11-618P17, complete sequence Length = 35105 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 acttgcaggaagagggttggg 456 ||||||||||||||||||||| Sbjct: 17260 acttgcaggaagagggttggg 17280
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 gaccatgaacatgtgctccaagtgc 188 ||||| ||||||||||||||||||| Sbjct: 16958170 gaccaagaacatgtgctccaagtgc 16958194
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 129 tgcgttaataactgcggcttctttggcag 157 |||||||| ||||| |||||||||||||| Sbjct: 32761767 tgcgttaacaactgtggcttctttggcag 32761739
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 gaccatgaacatgtgctccaagtgc 188 ||||| ||||||||||||||||||| Sbjct: 87983 gaccaagaacatgtgctccaagtgc 88007
>dbj|AK102503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095D08, full insert sequence Length = 1158 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 129 tgcgttaataactgcggcttctttggcag 157 |||||||| ||||| |||||||||||||| Sbjct: 303 tgcgttaacaactgtggcttctttggcag 331
>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence Length = 100208 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 120 ccaatcctatgcgttaataactgcggcttctttggcagtgccgcgaccatgaacatgtgc 179 ||||| || ||||||||||| || || ||||| || || | || |||||||||||||| Sbjct: 14092 ccaattctgtgcgttaataattgtggtttcttcggaagggaagctaccatgaacatgtgt 14151 Query: 180 tccaagtgccacaagga 196 |||||||| ||||||| Sbjct: 14152 tccaagtgttacaagga 14168
>gb|AE003528.3| Drosophila melanogaster chromosome 3L, section 57 of 83 of the complete sequence Length = 283815 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 ctgttgttgttgcggctgtggctgc 304 ||||||||||||| ||||||||||| Sbjct: 60145 ctgttgttgttgctgctgtggctgc 60169
>gb|AF380352.1| Gallus gallus UNC5H2 mRNA, complete cds Length = 4743 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cctcctcctttgatagcatt 251 |||||||||||||||||||| Sbjct: 3205 cctcctcctttgatagcatt 3224
>ref|NM_180890.1| Arabidopsis thaliana DNA binding AT5G59430 transcript variant AT5G59430.1 mRNA, complete cds Length = 2162 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 1569 cgttgtgcagcctgctgctg 1550
>ref|NM_125334.3| Arabidopsis thaliana DNA binding AT5G59430 transcript variant AT5G59430.2 mRNA, complete cds Length = 2356 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 1763 cgttgtgcagcctgctgctg 1744
>ref|XM_523804.1| PREDICTED: Pan troglodytes similar to RNA-binding protein Musashi2-L (LOC468415), mRNA Length = 3696 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 gccacaaggagatggtcatgaaggagga 214 ||||||||||| |||||| ||||||||| Sbjct: 3608 gccacaaggagctggtcaggaaggagga 3581
>ref|NM_001031225.1| Gallus gallus unc-5 homolog B (C. elegans) (UNC5B), mRNA Length = 4743 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cctcctcctttgatagcatt 251 |||||||||||||||||||| Sbjct: 3205 cctcctcctttgatagcatt 3224
>ref|NM_196306.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0068A07.18), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcagcctgctgctgatgtt 372 |||||||||||||||||||| Sbjct: 199 tgcagcctgctgctgatgtt 218
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 cctgctgctgatgttgcagg 377 |||||||||||||||||||| Sbjct: 1739763 cctgctgctgatgttgcagg 1739744
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gcagcctgctgctgatgttg 373 |||||||||||||||||||| Sbjct: 141645 gcagcctgctgctgatgttg 141664
>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence Length = 114057 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 cctgctgctgatgttgcagg 377 |||||||||||||||||||| Sbjct: 60820 cctgctgctgatgttgcagg 60801
>gb|AY227916.1| Conanthalictus wilmattae long-wavelength rhodopsin gene, partial cds Length = 981 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccacaaggagatggtcatga 207 |||||||||||||||||||| Sbjct: 679 ccacaaggagatggtcatga 660
>ref|XM_864952.1| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 3 (LOC539762), mRNA Length = 13873 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tgttgttgttgcggctgtggctgc 304 ||||| |||||||||||||||||| Sbjct: 5711 tgttgctgttgcggctgtggctgc 5688
>ref|XM_874567.1| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 5 (LOC539762), mRNA Length = 13876 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tgttgttgttgcggctgtggctgc 304 ||||| |||||||||||||||||| Sbjct: 5713 tgttgctgttgcggctgtggctgc 5690
>ref|XM_589234.2| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 2 (LOC539762), mRNA Length = 13204 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tgttgttgttgcggctgtggctgc 304 ||||| |||||||||||||||||| Sbjct: 5882 tgttgctgttgcggctgtggctgc 5859
>ref|NM_001031301.1| Gallus gallus Sin3A-associated protein, 130kDa (SAP130), mRNA Length = 3997 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ctgtggctgctgagcgctga 314 |||||||||||||||||||| Sbjct: 1830 ctgtggctgctgagcgctga 1811
>gb|AY286122.1| Cyanidioschyzon merolae DBV201 chromosome 1, complete sequence Length = 422021 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 agcacctgttgttgttgcggctgt 298 |||||||||||||||||| ||||| Sbjct: 3305 agcacctgttgttgttgctgctgt 3328
>gb|AY519544.1| Arabidopsis thaliana MYB transcription factor (At5g59430) mRNA, complete cds Length = 1737 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 1394 cgttgtgcagcctgctgctg 1375
>ref|XM_821159.1| Trypanosoma brucei TREU927 clone RPCI93-33N13 hypothetical protein (Tb927.7.6410) partial mRNA Length = 4371 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 cctgctgctgatgttgcagg 377 |||||||||||||||||||| Sbjct: 1944 cctgctgctgatgttgcagg 1963
>ref|XM_382757.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02581.1) partial mRNA Length = 1800 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ttgcggctgtggctgctgag 308 |||||||||||||||||||| Sbjct: 1578 ttgcggctgtggctgctgag 1559
>ref|XM_805741.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053508011.110) partial mRNA Length = 1155 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 tgttgttgttgcggctgtggctgc 304 ||||||||||||||||| |||||| Sbjct: 1116 tgttgttgttgcggctgcggctgc 1139
>ref|XM_809564.1| Trypanosoma cruzi strain CL Brener ATP-dependent zinc metallopeptidase (Tc00.1047053511717.170) partial mRNA Length = 2049 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tgttgttgttgcggctgtggctgc 304 |||||||||||| ||||||||||| Sbjct: 122 tgttgttgttgctgctgtggctgc 99
>ref|XM_815120.1| Trypanosoma cruzi strain CL Brener protein transport protein sec31 (Tc00.1047053506297.290) partial mRNA Length = 3699 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 ctgttgttgttgcggctgtggctg 303 |||||||||||| ||||||||||| Sbjct: 2187 ctgttgttgttgtggctgtggctg 2164
>gb|AC133002.6| Oryza sativa chromosome 11 BAC OJ1123_D06 genomic sequence, complete sequence Length = 88378 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gcagcctgctgctgatgttg 373 |||||||||||||||||||| Sbjct: 10456 gcagcctgctgctgatgttg 10475
>ref|NM_017228.1| Rattus norvegicus atrophin 1 (Atn1), mRNA Length = 4387 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tgttgttgcggctgtggctg 303 |||||||||||||||||||| Sbjct: 1808 tgttgttgcggctgtggctg 1789
>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence Length = 147107 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ggaagagggttgggctaacgggat 466 ||||||||| |||||||||||||| Sbjct: 28343 ggaagagggatgggctaacgggat 28366
>ref|XM_795565.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591477 (LOC591477), mRNA Length = 4389 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 280 ctgttgttgttgcggctgtggctgctga 307 ||||||||||||| ||||| |||||||| Sbjct: 2073 ctgttgttgttgctgctgttgctgctga 2046
>gb|BT000117.1| Arabidopsis thaliana telomere repeat-binding protein (At5g59430) mRNA, complete cds Length = 1915 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 1394 cgttgtgcagcctgctgctg 1375
>emb|X89453.1|RNDRPLA R.norvegicus mRNA for DRPLA protein Length = 4193 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tgttgttgcggctgtggctg 303 |||||||||||||||||||| Sbjct: 1603 tgttgttgcggctgtggctg 1584
>emb|AJ851560.1| Gallus gallus mRNA for hypothetical protein, clone 7d5 Length = 3997 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ctgtggctgctgagcgctga 314 |||||||||||||||||||| Sbjct: 1830 ctgtggctgctgagcgctga 1811
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcagcctgctgctgatgtt 372 |||||||||||||||||||| Sbjct: 119490 tgcagcctgctgctgatgtt 119471
>gb|AY128382.1| Arabidopsis thaliana telomere repeat-binding protein (At5g59430) mRNA, complete cds Length = 2200 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 1607 cgttgtgcagcctgctgctg 1588
>gb|AC015845.8| Homo sapiens chromosome 17, clone RP11-343K8, complete sequence Length = 191957 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ctggctgcctcctcctttgatagc 248 |||||||||||||||||| ||||| Sbjct: 92953 ctggctgcctcctcctttaatagc 92930
>gb|AC107952.5| Homo sapiens chromosome 8, clone RP11-140I16, complete sequence Length = 142102 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ggaagagggttgggctaacgggat 466 ||||||||| |||||||||||||| Sbjct: 119100 ggaagagggatgggctaacgggat 119123
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcagcctgctgctgatgtt 372 |||||||||||||||||||| Sbjct: 164203 tgcagcctgctgctgatgtt 164222
>gb|U31777.1|RNU31777 Rattus norvegicus atrophin-1 (DRPLA) mRNA, complete cds Length = 4387 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tgttgttgcggctgtggctg 303 |||||||||||||||||||| Sbjct: 1808 tgttgttgcggctgtggctg 1789
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gcagcctgctgctgatgttg 373 |||||||||||||||||||| Sbjct: 10047864 gcagcctgctgctgatgttg 10047883
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcagcctgctgctgatgtt 372 |||||||||||||||||||| Sbjct: 12599403 tgcagcctgctgctgatgtt 12599384
>gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, complete sequence Length = 176199 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aacttgcaggaagagggttg 454 |||||||||||||||||||| Sbjct: 126684 aacttgcaggaagagggttg 126703
>emb|BX830705.1|CNS0A1NQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2247 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 1761 cgttgtgcagcctgctgctg 1742
>emb|BX830199.1|CNS0A063 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZG02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 37 cgttgtgcagcctgctgctg 18
>gb|AY865071.1| Drosophila melanogaster strain Zm6 SR-CIII and SR-CI genes, complete cds Length = 3801 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 tgttgttgttgcggctgtgg 300 |||||||||||||||||||| Sbjct: 3068 tgttgttgttgcggctgtgg 3049
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ggaggaacaggccaagctgg 228 |||||||||||||||||||| Sbjct: 1898265 ggaggaacaggccaagctgg 1898284
>dbj|AB025604.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15 Length = 75125 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 33637 cgttgtgcagcctgctgctg 33618
>emb|Y17722.1|ATH17722 Arabidopsis thaliana trp1 gene Length = 4058 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgttgtgcagcctgctgctg 367 |||||||||||||||||||| Sbjct: 2959 cgttgtgcagcctgctgctg 2940
>dbj|AK072853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135L10, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcagcctgctgctgatgtt 372 |||||||||||||||||||| Sbjct: 416 tgcagcctgctgctgatgtt 435
>dbj|AK061008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A08, full insert sequence Length = 1478 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcagcctgctgctgatgtt 372 |||||||||||||||||||| Sbjct: 372 tgcagcctgctgctgatgtt 391
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcagcctgctgctgatgtt 372 |||||||||||||||||||| Sbjct: 12606699 tgcagcctgctgctgatgtt 12606680
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gcagcctgctgctgatgttg 373 |||||||||||||||||||| Sbjct: 10119561 gcagcctgctgctgatgttg 10119580
>gb|AC005325.1|AC005325 Homo sapiens chromosome 17, clone hRPK.60_A_24, complete sequence Length = 165228 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 187 gccacaaggagatggtcatgaaggagga 214 ||||||||||| |||||| ||||||||| Sbjct: 105971 gccacaaggagctggtcaggaaggagga 105998 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,802,771 Number of Sequences: 3902068 Number of extensions: 4802771 Number of successful extensions: 86305 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85860 Number of HSP's gapped (non-prelim): 445 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
