ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2i04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467507.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.060
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.060
3dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.060
4dbj|AK108806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.060
5gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, co... 42 0.94
6gb|AC161225.14| Mus musculus chromosome 5, clone RP23-37G13, com... 42 0.94
7gb|AC140291.2| Mus musculus BAC clone RP24-326N12 from chromosom... 42 0.94
8gb|AC183269.3| Pan troglodytes BAC clone CH251-685E7 from chromo... 42 0.94
9gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-... 42 0.94
10gb|AC092902.10| Homo sapiens 3 BAC RP11-379B18 (Roswell Park Can... 42 0.94
11gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, comple... 42 0.94
12emb|AL691517.20| Human DNA sequence from clone XXyac-12DB5 on ch... 42 0.94
13emb|AL513533.15| Human DNA sequence from clone RP11-341B24 on ch... 42 0.94
14emb|AL359972.10| Human DNA sequence from clone RP1-105K17 on chr... 42 0.94
15gb|AC130888.2| Homo sapiens 3 BAC RP11-77P16 (Roswell Park Cance... 42 0.94
16gb|AC116562.6| Homo sapiens BAC clone RP11-489M13 from 4, comple... 42 0.94
17dbj|AK124624.1| Homo sapiens cDNA FLJ42633 fis, clone BRACE30205... 42 0.94
18gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cance... 42 0.94
19gb|AC105271.2| Homo sapiens chromosome 1 clone RP4-650F12, compl... 42 0.94
20gb|AC034203.7| Homo sapiens chromosome 3 clone CTB-182H21, compl... 42 0.94
21gb|AC091856.3| Homo sapiens chromosome 5 clone CTD-2315B5, compl... 42 0.94
22gb|AC025887.4|AC025887 Homo sapiens chromosome , clone RP11-386P... 42 0.94
23gb|AC133041.3| Homo sapiens 3 BAC CTD-2026G6 (Cal Tech Human BAC... 42 0.94
24gb|AC099740.2| Takifugu rubripes clone 216J3, complete sequence 42 0.94
25gb|AC098806.3| Takifugu rubripes clone 208D11, complete sequence 42 0.94
26gb|AC104648.2| Homo sapiens BAC clone RP11-45D4 from 2, complete... 42 0.94
27gb|AC106809.2| Homo sapiens chromosome 5 clone RP11-53K6, comple... 42 0.94
28emb|CR352232.20| Zebrafish DNA sequence from clone DKEY-3L8 in l... 42 0.94
29dbj|AP003498.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 0.94
30gb|AY827554.1| Clostridium saccharoperbutylacetonicum uptake hyd... 40 3.7
31gb|AC113989.6| Mus musculus chromosome 3, clone RP24-130I14, com... 40 3.7
32gb|AC139060.5| Mus musculus chromosome 16, clone RP23-58G17, com... 40 3.7
33gb|AC140189.3| Mus musculus BAC clone RP24-370G18 from chromosom... 40 3.7
34gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, comple... 40 3.7
35emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chr... 40 3.7
36emb|AL355794.5| Human DNA sequence from clone RP4-781D12 on chro... 40 3.7
37emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 ... 40 3.7
38gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, comple... 40 3.7
39gb|AC109928.4| Homo sapiens BAC clone RP11-755F21 from 4, comple... 40 3.7
40gb|AC093694.4| Homo sapiens BAC clone RP11-769N3 from 4, complet... 40 3.7
41gb|AC073648.7| Homo sapiens BAC clone RP11-747H12 from 4, comple... 40 3.7
42ref|XM_679317.1| PREDICTED: Danio rerio similar to putative prot... 40 3.7
43gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11... 40 3.7
44emb|BX284619.11| Zebrafish DNA sequence from clone DKEY-251E24 i... 40 3.7
45gb|AC155910.6| Mus musculus 10 BAC RP24-492P8 (Roswell Park Canc... 40 3.7
46emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chr... 40 3.7 
>ref|XM_467507.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2595

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 40   tttctccaaggggatgttcttttctgc 66
            ||||||| |||||||||||||||||||
Sbjct: 2437 tttctcccaggggatgttcttttctgc 2411
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 40       tttctccaaggggatgttcttttctgc 66
                ||||||| |||||||||||||||||||
Sbjct: 29892640 tttctcccaggggatgttcttttctgc 29892614
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>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_D06
          Length = 112768

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 40    tttctccaaggggatgttcttttctgc 66
             ||||||| |||||||||||||||||||
Sbjct: 49605 tttctcccaggggatgttcttttctgc 49579
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>dbj|AK108806.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-D02, full
           insert sequence
          Length = 1407

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 40  tttctccaaggggatgttcttttctgc 66
           ||||||| |||||||||||||||||||
Sbjct: 868 tttctcccaggggatgttcttttctgc 842
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>gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, complete sequence
          Length = 162210

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 253    taaagattgcaatagttaaaa 273
              |||||||||||||||||||||
Sbjct: 119210 taaagattgcaatagttaaaa 119230
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>gb|AC161225.14| Mus musculus chromosome 5, clone RP23-37G13, complete sequence
          Length = 165525

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 253   taaagattgcaatagttaaaa 273
             |||||||||||||||||||||
Sbjct: 57455 taaagattgcaatagttaaaa 57475
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>gb|AC140291.2| Mus musculus BAC clone RP24-326N12 from chromosome 5, complete sequence
          Length = 167269

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 253    taaagattgcaatagttaaaa 273
              |||||||||||||||||||||
Sbjct: 149873 taaagattgcaatagttaaaa 149893
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>gb|AC183269.3| Pan troglodytes BAC clone CH251-685E7 from chromosome 3, complete
              sequence
          Length = 220398

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     aaatgcccatcaatcaattag 95
              |||||||||||||||||||||
Sbjct: 199026 aaatgcccatcaatcaattag 199006
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>gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-415D8 map p23.1,
             complete sequences
          Length = 295854

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 90939 aaatgcccatcaatcaattag 90959
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>gb|AC092902.10| Homo sapiens 3 BAC RP11-379B18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 124071

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 43734 aaatgcccatcaatcaattag 43754
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>gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, complete sequence
          Length = 112568

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 20191 aaatgcccatcaatcaattag 20171
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>emb|AL691517.20| Human DNA sequence from clone XXyac-12DB5 on chromosome X Contains a
             pyruvate dehydrogenase kinase, isoenzyme 1 (PDK1)
             pseudogene, complete sequence
          Length = 174181

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 17161 aaatgcccatcaatcaattag 17141
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>emb|AL513533.15| Human DNA sequence from clone RP11-341B24 on chromosome 10 Contains the
              3' end of the LIPA gene for lipase A lysosomal acid
              cholesterol esterase (Wolman disease), a novel zinc finger
              pseudogene and the CH25 gene for cholesterol
              25-hydroxylase, complete sequence
          Length = 148151

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     aaatgcccatcaatcaattag 95
              |||||||||||||||||||||
Sbjct: 115092 aaatgcccatcaatcaattag 115072
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>emb|AL359972.10| Human DNA sequence from clone RP1-105K17 on chromosome Xq13.2-21.1,
             complete sequence
          Length = 80630

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 48307 aaatgcccatcaatcaattag 48327
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>gb|AC130888.2| Homo sapiens 3 BAC RP11-77P16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 114687

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     aaatgcccatcaatcaattag 95
              |||||||||||||||||||||
Sbjct: 103020 aaatgcccatcaatcaattag 103000
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>gb|AC116562.6| Homo sapiens BAC clone RP11-489M13 from 4, complete sequence
          Length = 174826

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     aaatgcccatcaatcaattag 95
              |||||||||||||||||||||
Sbjct: 121174 aaatgcccatcaatcaattag 121154
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>dbj|AK124624.1| Homo sapiens cDNA FLJ42633 fis, clone BRACE3020594, moderately
          similar to Homo sapiens cytokine receptor-like factor 2
          (CRLF2)
          Length = 4161

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 75 aaatgcccatcaatcaattag 95
          |||||||||||||||||||||
Sbjct: 76 aaatgcccatcaatcaattag 56
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>gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152599

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     aaatgcccatcaatcaattag 95
              |||||||||||||||||||||
Sbjct: 149370 aaatgcccatcaatcaattag 149350
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>gb|AC105271.2| Homo sapiens chromosome 1 clone RP4-650F12, complete sequence
          Length = 112358

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 100   ttgttggcaaatgaattaaaa 120
             |||||||||||||||||||||
Sbjct: 83178 ttgttggcaaatgaattaaaa 83158
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>gb|AC034203.7| Homo sapiens chromosome 3 clone CTB-182H21, complete sequence
          Length = 105702

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 81968 aaatgcccatcaatcaattag 81948
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>gb|AC091856.3| Homo sapiens chromosome 5 clone CTD-2315B5, complete sequence
          Length = 175220

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     aaatgcccatcaatcaattag 95
              |||||||||||||||||||||
Sbjct: 104089 aaatgcccatcaatcaattag 104069
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>gb|AC025887.4|AC025887 Homo sapiens chromosome , clone RP11-386P4, complete sequence
          Length = 150655

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 31562 aaatgcccatcaatcaattag 31582
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>gb|AC133041.3| Homo sapiens 3 BAC CTD-2026G6 (Cal Tech Human BAC Library D) complete
             sequence
          Length = 59699

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 25418 aaatgcccatcaatcaattag 25398
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>gb|AC099740.2| Takifugu rubripes clone 216J3, complete sequence
          Length = 64132

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    ttttctgcaaatgtataaatg 79
             |||||||||||||||||||||
Sbjct: 57355 ttttctgcaaatgtataaatg 57375
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>gb|AC098806.3| Takifugu rubripes clone 208D11, complete sequence
          Length = 130460

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    ttttctgcaaatgtataaatg 79
             |||||||||||||||||||||
Sbjct: 33125 ttttctgcaaatgtataaatg 33145
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>gb|AC104648.2| Homo sapiens BAC clone RP11-45D4 from 2, complete sequence
          Length = 112084

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 85234 aaatgcccatcaatcaattag 85254
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>gb|AC106809.2| Homo sapiens chromosome 5 clone RP11-53K6, complete sequence
          Length = 113848

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 64744 aaatgcccatcaatcaattag 64764
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>emb|CR352232.20| Zebrafish DNA sequence from clone DKEY-3L8 in linkage group 23,
             complete sequence
          Length = 206478

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 136   gaagcaaactgaataatgcacaactgaaa 164
             |||||||||||||||| |||||| |||||
Sbjct: 78426 gaagcaaactgaataaagcacaagtgaaa 78454
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>dbj|AP003498.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-167J8, complete
             sequence
          Length = 120199

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    aaatgcccatcaatcaattag 95
             |||||||||||||||||||||
Sbjct: 25289 aaatgcccatcaatcaattag 25309
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>gb|AY827554.1| Clostridium saccharoperbutylacetonicum uptake hydrogenase operon,
            complete sequence
          Length = 5023

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  gaaataaagattgcaatagt 268
            ||||||||||||||||||||
Sbjct: 4289 gaaataaagattgcaatagt 4308
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>gb|AC113989.6| Mus musculus chromosome 3, clone RP24-130I14, complete sequence
          Length = 159841

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    tcctcatcttttctccaagg 50
             ||||||||||||||||||||
Sbjct: 89468 tcctcatcttttctccaagg 89487
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>gb|AC139060.5| Mus musculus chromosome 16, clone RP23-58G17, complete sequence
          Length = 196065

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     tttctccaaggggatgttct 59
              ||||||||||||||||||||
Sbjct: 132756 tttctccaaggggatgttct 132775
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>gb|AC140189.3| Mus musculus BAC clone RP24-370G18 from chromosome 1, complete sequence
          Length = 182590

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ttttctcctgagaatttata 26
             ||||||||||||||||||||
Sbjct: 59860 ttttctcctgagaatttata 59841
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>gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, complete sequence
          Length = 180397

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tccaaggggatgttcttttc 63
              ||||||||||||||||||||
Sbjct: 140668 tccaaggggatgttcttttc 140649
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>emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chromosome 10 Contains part
              of a novel gene (DKFZp761L0424) (KIAA1217) and three novel
              genes (FLJ11983 FLJ14139), complete sequence
          Length = 190429

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     ataaatgcccatcaatcaat 92
              ||||||||||||||||||||
Sbjct: 172917 ataaatgcccatcaatcaat 172898
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>emb|AL355794.5| Human DNA sequence from clone RP4-781D12 on chromosome 1 Contains the
             5' end of a nucleosome assembly protein 1-like 4 (NAP1L4)
             pseudogene, the 5' end of the CD58  gene for CD58 antigen,
             (lymphocyte function-associated antigen 3), the 3' end of
             the IGSF3 gene for immunoglobulin superfamily member 3 and
             a CpG island, complete sequence
          Length = 88484

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ataaatgcccatcaatcaat 92
             ||||||||||||||||||||
Sbjct: 13805 ataaatgcccatcaatcaat 13786
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>emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 on chromosome Xp11.21-11.23
             Contains  the 3' end of the PFKFB1 gene for
             6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, and
             the TRO gene for trophinin, complete sequence
          Length = 103115

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    tataaatgcccatcaatcaa 91
             ||||||||||||||||||||
Sbjct: 82058 tataaatgcccatcaatcaa 82039
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>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  taaaaaggaaccagtaaatt 135
            ||||||||||||||||||||
Sbjct: 9294 taaaaaggaaccagtaaatt 9275
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>gb|AC109928.4| Homo sapiens BAC clone RP11-755F21 from 4, complete sequence
          Length = 112353

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ataaatgcccatcaatcaat 92
             ||||||||||||||||||||
Sbjct: 21879 ataaatgcccatcaatcaat 21898
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>gb|AC093694.4| Homo sapiens BAC clone RP11-769N3 from 4, complete sequence
          Length = 158566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ataaatgcccatcaatcaat 92
             ||||||||||||||||||||
Sbjct: 93903 ataaatgcccatcaatcaat 93922
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>gb|AC073648.7| Homo sapiens BAC clone RP11-747H12 from 4, complete sequence
          Length = 180659

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aaatgcccatcaatcaatta 94
             ||||||||||||||||||||
Sbjct: 63901 aaatgcccatcaatcaatta 63882
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>ref|XM_679317.1| PREDICTED: Danio rerio similar to putative protein, with 2 coiled
           coil-4 domains, of eukaryotic origin, HoloCentric
           chromosome binding Protein HCP-6 (195.1 kD) (hcp-6)
           (LOC556493), mRNA
          Length = 4450

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  aggggatgttcttttctgca 67
           ||||||||||||||||||||
Sbjct: 616 aggggatgttcttttctgca 635
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>gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11, complete sequence
          Length = 183085

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ataaatgcccatcaatcaat 92
             ||||||||||||||||||||
Sbjct: 16127 ataaatgcccatcaatcaat 16108
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>emb|BX284619.11| Zebrafish DNA sequence from clone DKEY-251E24 in linkage group 1,
              complete sequence
          Length = 196931

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     aggggatgttcttttctgca 67
              ||||||||||||||||||||
Sbjct: 129301 aggggatgttcttttctgca 129282
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>gb|AC155910.6| Mus musculus 10 BAC RP24-492P8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 156641

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   gttggggtttgctctctatt 223
             ||||||||||||||||||||
Sbjct: 80262 gttggggtttgctctctatt 80243
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>emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chromosome 4, complete
             sequence
          Length = 230886

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tggttcttttctcctgagaa 20
             ||||||||||||||||||||
Sbjct: 97859 tggttcttttctcctgagaa 97878


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,118,067
Number of Sequences: 3902068
Number of extensions: 3118067
Number of successful extensions: 77811
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77704
Number of HSP's gapped (non-prelim): 107
length of query: 284
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 262
effective length of database: 17,147,199,772
effective search space: 4492566340264
effective search space used: 4492566340264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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