ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2j02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 246 bits (124), Expect = 1e-62 Identities = 124/124 (100%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120009 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119950 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119949 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 119890 Query: 121 acat 124 |||| Sbjct: 119889 acat 119886 Score = 246 bits (124), Expect = 1e-62 Identities = 124/124 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94885 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 94944 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94945 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 95004 Query: 121 acat 124 |||| Sbjct: 95005 acat 95008
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75649 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 75590 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75589 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 75530 Query: 121 acat 124 |||| Sbjct: 75529 acat 75526 Score = 58.0 bits (29), Expect = 6e-06 Identities = 32/33 (96%) Strand = Plus / Minus Query: 92 gcaggcaagagacaacctggcgaactgaaacat 124 |||||||||||||||||| |||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacat 430349
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118790 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 118731 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118730 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 118671 Query: 121 acat 124 |||| Sbjct: 118670 acat 118667
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 920 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 861 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 801 Query: 121 acat 124 |||| Sbjct: 800 acat 797
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119874 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119815 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119814 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 119755 Query: 121 acat 124 |||| Sbjct: 119754 acat 119751 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95282 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95341 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95342 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 95401 Query: 121 acat 124 |||| Sbjct: 95402 acat 95405
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119874 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119815 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119814 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 119755 Query: 121 acat 124 |||| Sbjct: 119754 acat 119751 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95282 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95341 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95342 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 95401 Query: 121 acat 124 |||| Sbjct: 95402 acat 95405
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119823 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119764 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119763 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 119704 Query: 121 acat 124 |||| Sbjct: 119703 acat 119700 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95227 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95286 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95287 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 95346 Query: 121 acat 124 |||| Sbjct: 95347 acat 95350
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381889 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 381948 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381949 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 382008 Query: 121 acat 124 |||| Sbjct: 382009 acat 382012 Score = 58.0 bits (29), Expect = 6e-06 Identities = 32/33 (96%) Strand = Plus / Plus Query: 92 gcaggcaagagacaacctggcgaactgaaacat 124 |||||||||||||||||| |||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacat 254074 Score = 58.0 bits (29), Expect = 6e-06 Identities = 32/33 (96%) Strand = Plus / Plus Query: 92 gcaggcaagagacaacctggcgaactgaaacat 124 |||||||||||||||||| |||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacat 125382
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113740 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 113681 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113680 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 113621 Query: 121 acat 124 |||| Sbjct: 113620 acat 113617 Score = 58.0 bits (29), Expect = 6e-06 Identities = 32/33 (96%) Strand = Plus / Minus Query: 92 gcaggcaagagacaacctggcgaactgaaacat 124 |||||||||||||||||| |||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacat 323036
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507860 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 31507919 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507920 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 31507979 Query: 121 acat 124 |||| Sbjct: 31507980 acat 31507983
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368422 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 368363 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368362 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 368303 Query: 121 acat 124 |||| Sbjct: 368302 acat 368299 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185027 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 184968 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184967 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 184908 Query: 121 acat 124 |||| Sbjct: 184907 acat 184904 Score = 58.0 bits (29), Expect = 6e-06 Identities = 32/33 (96%) Strand = Plus / Minus Query: 92 gcaggcaagagacaacctggcgaactgaaacat 124 |||||||||||||||||| |||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacat 295865
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84736 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 84677 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84676 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 84617 Query: 121 acat 124 |||| Sbjct: 84616 acat 84613
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119843 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119784 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119783 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 119724 Query: 121 acat 124 |||| Sbjct: 119723 acat 119720 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95275 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95334 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95335 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 95394 Query: 121 acat 124 |||| Sbjct: 95395 acat 95398
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122324 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 122383 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122384 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 122443 Query: 121 acat 124 |||| Sbjct: 122444 acat 122447 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14049 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 14108 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14109 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 14168 Query: 121 acat 124 |||| Sbjct: 14169 acat 14172
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140857 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 140916 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140917 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 140976 Query: 121 acat 124 |||| Sbjct: 140977 acat 140980
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93453 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 93512 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93513 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 93572 Query: 121 acat 124 |||| Sbjct: 93573 acat 93576
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44834 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 44775 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44774 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 44715 Query: 121 acat 124 |||| Sbjct: 44714 acat 44711 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20284 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 20343 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20344 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 20403 Query: 121 acat 124 |||| Sbjct: 20404 acat 20407
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58562 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 58503 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58502 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 58443 Query: 121 acat 124 |||| Sbjct: 58442 acat 58439
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1463 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 1404 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1403 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 1344 Query: 121 acat 124 |||| Sbjct: 1343 acat 1340
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27517 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 27576 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27577 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 27636 Query: 121 acat 124 |||| Sbjct: 27637 acat 27640
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268209 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9268268 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268269 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 9268328 Query: 121 acat 124 |||| Sbjct: 9268329 acat 9268332 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227709 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9227768 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227769 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 9227828 Query: 121 acat 124 |||| Sbjct: 9227829 acat 9227832 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164298 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9164357 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164358 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 9164417 Query: 121 acat 124 |||| Sbjct: 9164418 acat 9164421 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056123 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9056182 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056183 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 9056242 Query: 121 acat 124 |||| Sbjct: 9056243 acat 9056246
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938194 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 19938253 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938254 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 19938313 Query: 121 acat 124 |||| Sbjct: 19938314 acat 19938317 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387061 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 10387120 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387121 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 10387180 Query: 121 acat 124 |||| Sbjct: 10387181 acat 10387184 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277237 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 10277178 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277177 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 10277118 Query: 121 acat 124 |||| Sbjct: 10277117 acat 10277114
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242072 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9242013 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242012 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 9241953 Query: 121 acat 124 |||| Sbjct: 9241952 acat 9241949
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598376 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 31598435 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598436 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 31598495 Query: 121 acat 124 |||| Sbjct: 31598496 acat 31598499
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434043 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 19433984 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19433983 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 19433924 Query: 121 acat 124 |||| Sbjct: 19433923 acat 19433920
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525692 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 33525751 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525752 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 33525811 Query: 121 acat 124 |||| Sbjct: 33525812 acat 33525815
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47849 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 47790 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47789 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 47730 Query: 121 acat 124 |||| Sbjct: 47729 acat 47726
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70889 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 70948 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70949 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 71008 Query: 121 acat 124 |||| Sbjct: 71009 acat 71012
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123673 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 123614 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123613 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 123554 Query: 121 acat 124 |||| Sbjct: 123553 acat 123550 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99164 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 99223 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99224 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 99283 Query: 121 acat 124 |||| Sbjct: 99284 acat 99287
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53285 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 53226 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53225 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 53166 Query: 121 acat 124 |||| Sbjct: 53165 acat 53162
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51570 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 51511 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51510 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 51451 Query: 121 acat 124 |||| Sbjct: 51450 acat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119534 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119475 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119474 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 119415 Query: 121 acat 124 |||| Sbjct: 119414 acat 119411
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 77 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 137 Query: 121 acat 124 |||| Sbjct: 138 acat 141
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 180 Query: 121 acat 124 |||| Sbjct: 181 acat 184
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 121 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 181 Query: 121 acat 124 |||| Sbjct: 182 acat 185
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 180 Query: 121 acat 124 |||| Sbjct: 181 acat 184
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 180 Query: 121 acat 124 |||| Sbjct: 181 acat 184
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 117 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 177 Query: 121 acat 124 |||| Sbjct: 178 acat 181
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6088 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 6147 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6148 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 6207 Query: 121 acat 124 |||| Sbjct: 6208 acat 6211
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949470 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 19949529 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949530 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 19949589 Query: 121 acat 124 |||| Sbjct: 19949590 acat 19949593 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393100 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 10393159 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393160 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 10393219 Query: 121 acat 124 |||| Sbjct: 10393220 acat 10393223 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283276 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 10283217 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283216 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 10283157 Query: 121 acat 124 |||| Sbjct: 10283156 acat 10283153
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124390 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 124331 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124330 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 124271 Query: 121 acat 124 |||| Sbjct: 124270 acat 124267 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99841 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 99900 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99901 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 99960 Query: 121 acat 124 |||| Sbjct: 99961 acat 99964
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75829 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 75888 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 75889 caaccttttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaa 75948 Query: 121 acat 124 |||| Sbjct: 75949 acat 75952
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119817 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119758 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119757 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 119698 Query: 121 acat 124 |||| Sbjct: 119697 acat 119694 Score = 238 bits (120), Expect = 3e-60 Identities = 123/124 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95222 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95281 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95282 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 95341 Query: 121 acat 124 |||| Sbjct: 95342 acat 95345
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 234 bits (118), Expect = 5e-59 Identities = 121/122 (99%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1608 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 1667 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1668 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 1727 Query: 121 ac 122 || Sbjct: 1728 ac 1729
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 230 bits (116), Expect = 8e-58 Identities = 122/124 (98%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123407 agcgacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggt 123348 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123347 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 123288 Query: 121 acat 124 |||| Sbjct: 123287 acat 123284
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 230 bits (116), Expect = 8e-58 Identities = 122/124 (98%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123612 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 123553 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123552 caaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaa 123493 Query: 121 acat 124 |||| Sbjct: 123492 acat 123489 Score = 230 bits (116), Expect = 8e-58 Identities = 122/124 (98%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99125 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 99184 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99185 caaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaa 99244 Query: 121 acat 124 |||| Sbjct: 99245 acat 99248
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 230 bits (116), Expect = 8e-58 Identities = 122/124 (98%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12825948 agcgacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggt 12825889 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825888 caaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 12825829 Query: 121 acat 124 |||| Sbjct: 12825828 acat 12825825
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 230 bits (116), Expect = 8e-58 Identities = 122/124 (98%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5478 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 5537 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5538 caaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaa 5597 Query: 121 acat 124 |||| Sbjct: 5598 acat 5601
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 230 bits (116), Expect = 8e-58 Identities = 122/124 (98%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 125 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 126 caaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaa 185 Query: 121 acat 124 |||| Sbjct: 186 acat 189
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 206 bits (104), Expect = 1e-50 Identities = 120/124 (96%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136528 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 136469 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 136468 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 136410 Query: 121 acat 124 |||| Sbjct: 136409 acat 136406 Score = 206 bits (104), Expect = 1e-50 Identities = 120/124 (96%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105897 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 105956 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105957 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 106015 Query: 121 acat 124 |||| Sbjct: 106016 acat 106019
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132712 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 132653 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132652 taacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 132594 Query: 121 acat 124 |||| Sbjct: 132593 acat 132590 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104166 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 104225 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104226 taacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 104284 Query: 121 acat 124 |||| Sbjct: 104285 acat 104288
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131604 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 131545 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131544 taacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 131486 Query: 121 acat 124 |||| Sbjct: 131485 acat 131482 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103031 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 103090 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103091 taacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 103149 Query: 121 acat 124 |||| Sbjct: 103150 acat 103153
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 140297 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 140238 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 140237 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 140179 Query: 121 acat 124 |||| Sbjct: 140178 acat 140175 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 109763 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 109822 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 109823 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 109881 Query: 121 acat 124 |||| Sbjct: 109882 acat 109885
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 139523 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 139464 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139463 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 139405 Query: 121 acat 124 |||| Sbjct: 139404 acat 139401 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110422 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 110481 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110482 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 110540 Query: 121 acat 124 |||| Sbjct: 110541 acat 110544
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134918 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 134859 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134858 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 134800 Query: 121 acat 124 |||| Sbjct: 134799 acat 134796 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105364 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 105423 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105424 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 105482 Query: 121 acat 124 |||| Sbjct: 105483 acat 105486
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 60 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 119 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 120 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 178 Query: 121 acat 124 |||| Sbjct: 179 acat 182
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 189 Query: 121 acat 124 |||| Sbjct: 190 acat 193
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 189 Query: 121 acat 124 |||| Sbjct: 190 acat 193
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 189 Query: 121 acat 124 |||| Sbjct: 190 acat 193
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 189 Query: 121 acat 124 |||| Sbjct: 190 acat 193
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 189 Query: 121 acat 124 |||| Sbjct: 190 acat 193
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 127801 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 127742 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127741 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 127683 Query: 121 acat 124 |||| Sbjct: 127682 acat 127679 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 107121 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 107180 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107181 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 107239 Query: 121 acat 124 |||| Sbjct: 107240 acat 107243
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134160 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 134101 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134100 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 134042 Query: 121 acat 124 |||| Sbjct: 134041 acat 134038 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103811 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 103870 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103871 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 103929 Query: 121 acat 124 |||| Sbjct: 103930 acat 103933
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132705 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 132646 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132645 taacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 132587 Query: 121 acat 124 |||| Sbjct: 132586 acat 132583 Score = 198 bits (100), Expect = 3e-48 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104164 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 104223 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104224 taacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 104282 Query: 121 acat 124 |||| Sbjct: 104283 acat 104286
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 194 bits (98), Expect = 4e-47 Identities = 117/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46317 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtca 46376 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 46377 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 46435 Query: 123 at 124 || Sbjct: 46436 at 46437
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 135841 agcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggt 135782 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135781 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 135723 Query: 121 acat 124 |||| Sbjct: 135722 acat 135719 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 106068 agcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggt 106127 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106128 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 106186 Query: 121 acat 124 |||| Sbjct: 106187 acat 106190
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 142045 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggt 141986 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141985 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 141927 Query: 121 acat 124 |||| Sbjct: 141926 acat 141923 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 111612 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggt 111671 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 111672 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 111730 Query: 121 acat 124 |||| Sbjct: 111731 acat 111734
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 62 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 121 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122 taaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 180 Query: 121 acat 124 |||| Sbjct: 181 acat 184
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 132935 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 132876 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132875 taaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 132817 Query: 121 acat 124 |||| Sbjct: 132816 acat 132813 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 103829 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 103888 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103889 taaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 103947 Query: 121 acat 124 |||| Sbjct: 103948 acat 103951
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggggttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 189 Query: 121 acat 124 |||| Sbjct: 190 acat 193
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 40 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 99 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 100 caacctttcaaactg-ctgccgaatccatgggcaggcaagagacaacctggcgaactgaa 158 Query: 121 acat 124 |||| Sbjct: 159 acat 162
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 136117 agcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggt 136058 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 136057 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 135999 Query: 121 acat 124 |||| Sbjct: 135998 acat 135995 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 106290 agcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggt 106349 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106350 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 106408 Query: 121 acat 124 |||| Sbjct: 106409 acat 106412
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 133896 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 133837 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133836 taaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 133778 Query: 121 acat 124 |||| Sbjct: 133777 acat 133774 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 104753 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 104812 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104813 taaccttttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 104871 Query: 121 acat 124 |||| Sbjct: 104872 acat 104875
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 130472 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 130413 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130412 caacctttcgaact-actgctgaatccatgggcaggcaagagacaacctggcgaactgaa 130354 Query: 121 acat 124 |||| Sbjct: 130353 acat 130350 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 101984 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 102043 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 102044 caacctttcgaact-actgctgaatccatgggcaggcaagagacaacctggcgaactgaa 102102 Query: 121 acat 124 |||| Sbjct: 102103 acat 102106
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 139650 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 139591 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139590 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 139532 Query: 121 acat 124 |||| Sbjct: 139531 acat 139528 Score = 190 bits (96), Expect = 7e-46 Identities = 118/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 109649 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 109708 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 109709 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 109767 Query: 121 acat 124 |||| Sbjct: 109768 acat 109771
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 188 bits (95), Expect = 3e-45 Identities = 98/99 (98%) Strand = Plus / Plus Query: 26 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 85 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 86 ccatgagcaggcaagagacaacctggcgaactgaaacat 124 ||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacat 99
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 40 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 99 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 100 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 158 Query: 123 at 124 || Sbjct: 159 at 160
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 136235 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 136176 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 136175 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 136117 Query: 123 at 124 || Sbjct: 136116 at 136115 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 106395 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 106454 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106455 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 106513 Query: 123 at 124 || Sbjct: 106514 at 106515
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 136873 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 136814 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 136813 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 136755 Query: 123 at 124 || Sbjct: 136754 at 136753 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 106684 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 106743 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106744 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 106802 Query: 123 at 124 || Sbjct: 106803 at 106804
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1589 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 1648 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1649 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 1707 Query: 123 at 124 || Sbjct: 1708 at 1709
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 135481 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 135422 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135421 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 135363 Query: 123 at 124 || Sbjct: 135362 at 135361 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 105555 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 105614 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105615 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 105673 Query: 123 at 124 || Sbjct: 105674 at 105675
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 135616 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 135557 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135556 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 135498 Query: 123 at 124 || Sbjct: 135497 at 135496 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 105727 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 105786 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105787 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 105845 Query: 123 at 124 || Sbjct: 105846 at 105847
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 135614 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 135555 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135554 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 135496 Query: 123 at 124 || Sbjct: 135495 at 135494 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 105724 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 105783 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105784 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 105842 Query: 123 at 124 || Sbjct: 105843 at 105844
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 135526 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 135467 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135466 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 135408 Query: 123 at 124 || Sbjct: 135407 at 135406 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 105602 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 105661 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105662 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 105720 Query: 123 at 124 || Sbjct: 105721 at 105722
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 136233 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 136174 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 136173 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 136115 Query: 123 at 124 || Sbjct: 136114 at 136113 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 106393 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 106452 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106453 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 106511 Query: 123 at 124 || Sbjct: 106512 at 106513
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 135493 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 135434 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135433 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 135375 Query: 123 at 124 || Sbjct: 135374 at 135373 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 105569 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 105628 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105629 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 105687 Query: 123 at 124 || Sbjct: 105688 at 105689
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 186 bits (94), Expect = 1e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 165 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 224 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 225 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 283 Query: 123 at 124 || Sbjct: 284 at 285
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 182 bits (92), Expect = 2e-43 Identities = 117/124 (94%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 139441 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 139382 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 139381 caacctttcgaactg-ctgctgaatccatgggcagacaagagacaacctggcgaactgaa 139323 Query: 121 acat 124 |||| Sbjct: 139322 acat 139319 Score = 182 bits (92), Expect = 2e-43 Identities = 117/124 (94%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 109656 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 109715 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 109716 caacctttcgaactg-ctgctgaatccatgggcagacaagagacaacctggcgaactgaa 109774 Query: 121 acat 124 |||| Sbjct: 109775 acat 109778
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 182 bits (92), Expect = 2e-43 Identities = 117/124 (94%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 112 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 171 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 172 caacctttcgaactg-ctgctgaatccatgggcagacaagagacaacctggcgaactgaa 230 Query: 121 acat 124 |||| Sbjct: 231 acat 234
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 182 bits (92), Expect = 2e-43 Identities = 117/124 (94%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 86325 agcgacgaaatgcttcggggagttgaaaatgagcatagatccggagattcccgaataggt 86384 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 86385 taacccttttaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 86443 Query: 121 acat 124 |||| Sbjct: 86444 acat 86447
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 182 bits (92), Expect = 2e-43 Identities = 117/124 (94%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 63 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 122 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||||| |||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 123 caacctttcaaactg-ctgctgaatccatgggcaggcaagagacaacctaacgaactgaa 181 Query: 121 acat 124 |||| Sbjct: 182 acat 185
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 178 bits (90), Expect = 3e-42 Identities = 115/122 (94%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 52621 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 52562 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 ||||||| ||||| |||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 52561 accttttgaactg-ctgctgaatccatgggcagacaagagataacctggcgaactgaaac 52503 Query: 123 at 124 || Sbjct: 52502 at 52501 Score = 178 bits (90), Expect = 3e-42 Identities = 115/122 (94%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 37207 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 37266 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 ||||||| ||||| |||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 37267 accttttgaactg-ctgctgaatccatgggcagacaagagataacctggcgaactgaaac 37325 Query: 123 at 124 || Sbjct: 37326 at 37327
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 178 bits (90), Expect = 3e-42 Identities = 115/122 (94%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 131726 cgacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtca 131667 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131666 acctttcgaact-tctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 131608 Query: 123 at 124 || Sbjct: 131607 at 131606 Score = 178 bits (90), Expect = 3e-42 Identities = 115/122 (94%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 101719 cgacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtca 101778 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 101779 acctttcgaact-tctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 101837 Query: 123 at 124 || Sbjct: 101838 at 101839
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 178 bits (90), Expect = 3e-42 Identities = 115/122 (94%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 135964 cgacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggca 135905 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135904 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 135846 Query: 123 at 124 || Sbjct: 135845 at 135844 Score = 178 bits (90), Expect = 3e-42 Identities = 115/122 (94%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 106174 cgacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggca 106233 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106234 acctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 106292 Query: 123 at 124 || Sbjct: 106293 at 106294
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 178 bits (90), Expect = 3e-42 Identities = 115/122 (94%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 4135 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 4194 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 ||||||| ||||| |||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 4195 accttttgaactg-ctgctgaatccatgggcagacaagagataacctggcgaactgaaac 4253 Query: 123 at 124 || Sbjct: 4254 at 4255
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 4294 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 4353 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 4354 caacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactgaa 4412 Query: 121 acat 124 |||| Sbjct: 4413 acat 4416
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| Sbjct: 142816 agcgacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggt 142757 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 142756 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 142698 Query: 121 acat 124 |||| Sbjct: 142697 acat 142694 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| Sbjct: 110512 agcgacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggt 110571 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110572 caacctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 110630 Query: 121 acat 124 |||| Sbjct: 110631 acat 110634
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 174 bits (88), Expect = 4e-41 Identities = 110/116 (94%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 5 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 64 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1833 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaac 1892 Query: 65 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1893 ctttcgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaa 1947
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 2107 agcgacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggt 2166 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 2167 taaccttttgaactg-ctgctgaattcataggcaggcaagagacaacctggcgaactgaa 2225 Query: 121 acat 124 |||| Sbjct: 2226 acat 2229
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 23631 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 23572 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 23571 caacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactgaa 23513 Query: 121 acat 124 |||| Sbjct: 23512 acat 23509
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| Sbjct: 47 agcgacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggt 106 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| Sbjct: 107 taaccttttaaactg-ctgctgaatccataggcgggcaagagacaacctggcgaactgaa 165 Query: 121 acat 124 |||| Sbjct: 166 acat 169
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 79707 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 79648 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 79647 caacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactgaa 79589 Query: 121 acat 124 |||| Sbjct: 79588 acat 79585
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 118086 agcgacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggt 118027 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 118026 taaccttttgaactg-ctgctgaattcataggcaggcaagagacaacctggcgaactgaa 117968 Query: 121 acat 124 |||| Sbjct: 117967 acat 117964 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 90016 agcgacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggt 90075 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 90076 taaccttttgaactg-ctgctgaattcataggcaggcaagagacaacctggcgaactgaa 90134 Query: 121 acat 124 |||| Sbjct: 90135 acat 90138
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 4563 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 4622 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 4623 caacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactgaa 4681 Query: 121 acat 124 |||| Sbjct: 4682 acat 4685
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 4563 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 4622 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 4623 caacctttcgaactg-ctgctgaattcacgagcaggcaagagacaacctggcgaactgaa 4681 Query: 121 acat 124 |||| Sbjct: 4682 acat 4685
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 174 bits (88), Expect = 4e-41 Identities = 116/124 (93%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 88411 agcgacgaaatgcttcggggagttgaaaattagcatagatccggagattcccgaataggt 88470 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 88471 taacctttttcactg-ctgctgaatccatgggcaggcaagagacaacctggtgaactgaa 88529 Query: 121 acat 124 |||| Sbjct: 88530 acat 88533
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 172 bits (87), Expect = 2e-40 Identities = 90/91 (98%) Strand = Plus / Plus Query: 34 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 93 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 94 aggcaagagacaacctggcgaactgaaacat 124 ||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacat 91
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 170 bits (86), Expect = 6e-40 Identities = 89/90 (98%) Strand = Plus / Plus Query: 35 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 94 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 95 ggcaagagacaacctggcgaactgaaacat 124 |||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacat 90
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 168 bits (85), Expect = 2e-39 Identities = 110/117 (94%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 8 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 67 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 89811 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 89752 Query: 68 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 124 || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 89751 ttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 89696
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 168 bits (85), Expect = 2e-39 Identities = 110/117 (94%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 8 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 67 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 459 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 518 Query: 68 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 124 || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 519 ttgaactg-ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 574
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 167 bits (84), Expect = 1e-38 Identities = 115/124 (92%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 64 agcgacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaatgggt 123 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 124 taaccttttgaactg-ctgctgaattcataggcaggcaagagacaacctggcgaactgaa 182 Query: 121 acat 124 |||| Sbjct: 183 acat 186
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 165 bits (83), Expect = 4e-38 Identities = 86/87 (98%) Strand = Plus / Plus Query: 38 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 97 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 98 aagagacaacctggcgaactgaaacat 124 ||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacat 87
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 163 bits (82), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 73 cgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggca 132 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 133 acctttcgaact-tctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 191 Query: 123 at 124 || Sbjct: 192 at 193
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 163 bits (82), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 73 cgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggca 132 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 133 acctttcgaact-tctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 191 Query: 123 at 124 || Sbjct: 192 at 193
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 163 bits (82), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 561 cgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggca 620 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 621 acctttcgaact-tctgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 679 Query: 123 at 124 || Sbjct: 680 at 681
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 163 bits (82), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| | Sbjct: 128381 cgacgaaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggtta 128322 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 ||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 128321 accttttgaactg-ctgctgaattcataggcaggcaagagacaacctggcgaactgaaac 128263 Query: 123 at 124 || Sbjct: 128262 at 128261 Score = 163 bits (82), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| | Sbjct: 95066 cgacgaaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggtta 95125 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 ||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 95126 accttttgaactg-ctgctgaattcataggcaggcaagagacaacctggcgaactgaaac 95184 Query: 123 at 124 || Sbjct: 95185 at 95186
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 159 bits (80), Expect = 2e-36 Identities = 114/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| Sbjct: 116146 agcgacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggt 116087 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||| |||||| ||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 116086 taacctttgaaactg-ctgctgaattcataggcagacaagagacaacctggcgaactgaa 116028 Query: 121 acat 124 |||| Sbjct: 116027 acat 116024 Score = 159 bits (80), Expect = 2e-36 Identities = 114/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| Sbjct: 85974 agcgacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggt 86033 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||||| |||||| ||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 86034 taacctttgaaactg-ctgctgaattcataggcagacaagagacaacctggcgaactgaa 86092 Query: 121 acat 124 |||| Sbjct: 86093 acat 86096
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 159 bits (80), Expect = 2e-36 Identities = 114/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| Sbjct: 64 agcgacgaaatgcttcggggagctgaaaataagcatggatccggagattcccgaataggt 123 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 124 taaccttttgaactg-ctgctgaattcataggcagacaagagacaacctggcgaactgaa 182 Query: 121 acat 124 |||| Sbjct: 183 acat 186
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 157 bits (79), Expect = 9e-36 Identities = 110/119 (92%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 177096 cgacgaaatgcttcggggagttgaaaatcagcatagatccggagattcccgaatagggca 177155 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 121 |||||| ||||| |||||||||||||| |||||||||||| |||| |||||||||||| Sbjct: 177156 acctttcgaactg-ctgctgaatccatgggcaggcaagagagaaccaggcgaactgaaa 177213
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 153 bits (77), Expect = 1e-34 Identities = 115/125 (92%), Gaps = 2/125 (1%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 |||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||| Sbjct: 131808 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatatagg 131749 Query: 60 tcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactga 119 ||||||||| ||||| |||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 131748 tcaacctttcgaactg-ctgctgaatccacgggcaggcaagagacaacctggtgaactga 131690 Query: 120 aacat 124 ||||| Sbjct: 131689 aacat 131685 Score = 153 bits (77), Expect = 1e-34 Identities = 115/125 (92%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 |||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||| Sbjct: 103586 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatatagg 103645 Query: 60 tcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactga 119 ||||||||| ||||| |||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 103646 tcaacctttcgaactg-ctgctgaatccacgggcaggcaagagacaacctggtgaactga 103704 Query: 120 aacat 124 ||||| Sbjct: 103705 aacat 103709
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 151 bits (76), Expect = 6e-34 Identities = 113/124 (91%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||| Sbjct: 64 agcgacgaaatgcttcggggagctgaaaataagtatggatccggagattcccgaataggt 123 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||||||||| ||||||||| ||| || |||||||||||||| ||||||||||| Sbjct: 124 taaccttttaaactg-ctgctgaattcataggcgggcaagagacaacccggcgaactgaa 182 Query: 121 acat 124 |||| Sbjct: 183 acat 186
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 147 bits (74), Expect = 9e-33 Identities = 111/122 (90%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || | Sbjct: 65 cgacgaaatgcttcggggagttgaaaataagcatagatccgtagattcccgaatggggta 124 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||||| | |||| ||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 125 acctttcacactg-ctgctcaatccatgggcaggaaagagacaacctggcgaactgaaac 183 Query: 123 at 124 || Sbjct: 184 at 185
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 145 bits (73), Expect = 4e-32 Identities = 114/125 (91%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 |||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||| Sbjct: 2662 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatatagg 2721 Query: 60 tcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactga 119 ||||||||| ||||| |||||||||||| | |||||||||||||||| ||| ||||||| Sbjct: 2722 tcaacctttcgaactg-ctgctgaatccacgggcaggcaagagacaacttggtgaactga 2780 Query: 120 aacat 124 ||||| Sbjct: 2781 aacat 2785
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 145 bits (73), Expect = 4e-32 Identities = 114/125 (91%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 |||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||| Sbjct: 917 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatatagg 976 Query: 60 tcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactga 119 ||||||||| ||||| |||||||||||| | |||||||||||||||| ||| ||||||| Sbjct: 977 tcaacctttcgaactg-ctgctgaatccacgggcaggcaagagacaacttggtgaactga 1035 Query: 120 aacat 124 ||||| Sbjct: 1036 aacat 1040
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 143 bits (72), Expect = 1e-31 Identities = 112/124 (90%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 3953 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 4012 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || || | |||||||||||| |||||||||||| Sbjct: 4013 taaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcgaactgaa 4071 Query: 121 acat 124 |||| Sbjct: 4072 acat 4075
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 143 bits (72), Expect = 1e-31 Identities = 112/124 (90%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| Sbjct: 146496 agcgacgaaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggt 146437 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||| ||||||||| ||| |||||| |||||||||||||||||||||| Sbjct: 146436 taaccttttgaact-actgctgaattcataggcaggcgagagacaacctggcgaactgaa 146378 Query: 121 acat 124 |||| Sbjct: 146377 acat 146374 Score = 143 bits (72), Expect = 1e-31 Identities = 112/124 (90%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| Sbjct: 111966 agcgacgaaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggt 112025 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| |||| ||||||||| ||| |||||| |||||||||||||||||||||| Sbjct: 112026 taaccttttgaact-actgctgaattcataggcaggcgagagacaacctggcgaactgaa 112084 Query: 121 acat 124 |||| Sbjct: 112085 acat 112088
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 143 bits (72), Expect = 1e-31 Identities = 112/124 (90%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 63 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 122 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || || | |||||||||||| |||||||||||| Sbjct: 123 taaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcgaactgaa 181 Query: 121 acat 124 |||| Sbjct: 182 acat 185
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 143 bits (72), Expect = 1e-31 Identities = 112/124 (90%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 151182 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 151123 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || || | |||||||||||| |||||||||||| Sbjct: 151122 taaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcgaactgaa 151064 Query: 121 acat 124 |||| Sbjct: 151063 acat 151060 Score = 143 bits (72), Expect = 1e-31 Identities = 112/124 (90%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 117484 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 117543 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || || | |||||||||||| |||||||||||| Sbjct: 117544 taaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcgaactgaa 117602 Query: 121 acat 124 |||| Sbjct: 117603 acat 117606
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 143 bits (72), Expect = 1e-31 Identities = 112/124 (90%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 63 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 122 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| ||||||||| || || | |||||||||||| |||||||||||| Sbjct: 123 taaccttttgaactg-ctgctgaattcacaagtaagcaagagacaacttggcgaactgaa 181 Query: 121 acat 124 |||| Sbjct: 182 acat 185
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 139 bits (70), Expect = 2e-30 Identities = 109/122 (89%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||| | Sbjct: 143984 cgacgaaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggtta 144043 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 ||||| |||||||||||||||| || ||||| |||||||||||| ||||||||||||| Sbjct: 144044 accttccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaac 144103 Query: 123 at 124 || Sbjct: 144104 at 144105 Score = 139 bits (70), Expect = 2e-30 Identities = 109/122 (89%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||| | Sbjct: 88867 cgacgaaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggtta 88808 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 ||||| |||||||||||||||| || ||||| |||||||||||| ||||||||||||| Sbjct: 88807 accttccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaac 88748 Query: 123 at 124 || Sbjct: 88747 at 88746
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 131 bits (66), Expect = 5e-28 Identities = 108/122 (88%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||||||||||| |||||| |||||| ||||||||||||||| |||||| || Sbjct: 767 cgacgaaacgcttcggggagctgaaaagaagcattgatccggagattcccgaatagggca 826 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||| || |||| |||||||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 827 acctcttgaacttcctgctgaattcataggcaggatagagacaacctggcgaactgaaac 886 Query: 123 at 124 || Sbjct: 887 at 888
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 127 bits (64), Expect = 8e-27 Identities = 111/124 (89%), Gaps = 2/124 (1%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||||| ||||| |||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactg-ctgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 121 acat 124 |||| Sbjct: 6394 acat 6391
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 119 bits (60), Expect = 2e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| Sbjct: 51 agcgacgaaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggg 110 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||| || |||||||||||||| || | ||||||||||||||||||||||||||| Sbjct: 111 gaacctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaa 170 Query: 121 acat 124 |||| Sbjct: 171 acat 174
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 119 bits (60), Expect = 2e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| Sbjct: 64 agcgacgaaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggg 123 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||| || |||||||||||||| || | ||||||||||||||||||||||||||| Sbjct: 124 gaacctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaa 183 Query: 121 acat 124 |||| Sbjct: 184 acat 187
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 117 bits (59), Expect = 8e-24 Identities = 71/75 (94%) Strand = Plus / Minus Query: 4 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 24063436 gacgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaa 24063377 Query: 64 ccttttaaactgcct 78 | |||| |||||||| Sbjct: 24063376 cattttgaactgcct 24063362
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 117 bits (59), Expect = 8e-24 Identities = 71/75 (94%) Strand = Plus / Minus Query: 4 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 23991642 gacgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaa 23991583 Query: 64 ccttttaaactgcct 78 | |||| |||||||| Sbjct: 23991582 cattttgaactgcct 23991568
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 117 bits (59), Expect = 8e-24 Identities = 71/75 (94%) Strand = Plus / Plus Query: 4 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 23960 gacgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaa 24019 Query: 64 ccttttaaactgcct 78 | |||| |||||||| Sbjct: 24020 cattttgaactgcct 24034
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 111 bits (56), Expect = 5e-22 Identities = 107/124 (86%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||| || ||| || |||||| ||||||||||| ||| |||||| Sbjct: 168 agcgacgaaatgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggg 227 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 ||||| || |||||||||||||| || | ||||||||||||||||||||||||||| Sbjct: 228 gaacctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaa 287 Query: 121 acat 124 |||| Sbjct: 288 acat 291
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 111 bits (56), Expect = 5e-22 Identities = 82/88 (93%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| Sbjct: 95 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgatatagg 36 Query: 60 tcaaccttttaaactgcctgctgaatcc 87 ||||||||| ||||| ||||||||||| Sbjct: 35 tcaacctttcgaactg-ctgctgaatcc 9
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 111 bits (56), Expect = 5e-22 Identities = 82/88 (93%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| Sbjct: 89 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgatatagg 30 Query: 60 tcaaccttttaaactgcctgctgaatcc 87 ||||||||| ||||| ||||||||||| Sbjct: 29 tcaacctttcgaactg-ctgctgaatcc 3
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 109 bits (55), Expect = 2e-21 Identities = 77/83 (92%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 42 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 101 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 102 gacaacctggcgaactgaaacat 124 ||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacat 431
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 107 bits (54), Expect = 8e-21 Identities = 54/54 (100%) Strand = Plus / Plus Query: 71 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 54
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 107 bits (54), Expect = 8e-21 Identities = 60/62 (96%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 670 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 611 Query: 61 ca 62 || Sbjct: 610 ca 609
>gb|AF141147.1|AF141147 Vigna unguiculata clone VU53KNF3-1 16S ribosomal RNA gene, and 18S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 370 Score = 105 bits (53), Expect = 3e-20 Identities = 66/69 (95%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| Sbjct: 95 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgatatagg 36 Query: 60 tcaaccttt 68 ||||||||| Sbjct: 35 tcaaccttt 27
>emb|X00012.1|CHSORN1 Spirodela oligorhiza chloroplast 5' end of gene for 23S rRNA Length = 200 Score = 103 bits (52), Expect = 1e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141 agcgacgaaatgcttcgtggagttgaaaataagcatagatccggagattcccgaataggt 200
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 99.6 bits (50), Expect = 2e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 66 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 67 tttaaactgc 76 || ||||||| Sbjct: 128 ttaaaactgc 137
>gb|AF141154.1|AF141154 Vigna unguiculata clone VU124NBS4 ribosomal RNA operon, partial sequence Length = 370 Score = 99.6 bits (50), Expect = 2e-18 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||| Sbjct: 277 agcgacgaaatgcttcggggagttgaaaatcagcgtagatccggagattcccgatatagg 336 Query: 60 tcaaccttttaaactgcctgctgaatccatgagc 93 ||||||||| ||||| |||||||| ||| |||| Sbjct: 337 tcaacctttcgaactg-ctgctgaacccacgagc 369
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 95.6 bits (48), Expect = 3e-17 Identities = 105/124 (84%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| Sbjct: 64 agcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaataggg 123 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||| || ||| | |||||||||||| ||| | |||||| |||||||||||||||| Sbjct: 124 caacctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaa 183 Query: 121 acat 124 |||| Sbjct: 184 acat 187
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 95.6 bits (48), Expect = 3e-17 Identities = 105/124 (84%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| Sbjct: 125201 agcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaataggg 125142 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||| || ||| | |||||||||||| ||| | |||||| |||||||||||||||| Sbjct: 125141 caacctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaa 125082 Query: 121 acat 124 |||| Sbjct: 125081 acat 125078 Score = 95.6 bits (48), Expect = 3e-17 Identities = 105/124 (84%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| Sbjct: 94665 agcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaataggg 94724 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||||| || ||| | |||||||||||| ||| | |||||| |||||||||||||||| Sbjct: 94725 caacctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaa 94784 Query: 121 acat 124 |||| Sbjct: 94785 acat 94788
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 1e-16 Identities = 105/119 (88%), Gaps = 4/119 (3%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 124 ||| |||||| ||||| | |||||| | || ||||||| |||| ||||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggcgaactgaaacat 183
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 89.7 bits (45), Expect = 2e-15 Identities = 61/65 (93%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 57 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 116 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 117 tgaaa 121 ||||| Sbjct: 3636 tgaaa 3632 Score = 52.0 bits (26), Expect = 4e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggag 46 |||||||||||||||| | |||||| |||||||| |||||| |||| Sbjct: 3739 agcgacgaaatgcttcagagagttgcaaataagcgtagatcaggag 3694
>gb|AY690322.1| Citrus meyeri tRNA-Ala (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 89.7 bits (45), Expect = 2e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagatt 49 |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 49 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagatt 1
>gb|AY690321.1| Citrus reticulata tRNA-tRNA (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 89.7 bits (45), Expect = 2e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagatt 49 |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 49 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagatt 1
>gb|AF141151.1|AF141151 Vigna unguiculata clone VU124KNF1-1 16S ribosomal RNA gene, partial sequence and 18S ribosomal RNA gene, partial sequence Length = 345 Score = 89.7 bits (45), Expect = 2e-15 Identities = 64/69 (92%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc-aaatagg 59 ||||||||||||||| |||||||||||||| ||| ||||||||||||||||| | ||||| Sbjct: 266 agcgacgaaatgctttggggagttgaaaatcagcgtagatccggagattcccgatatagg 325 Query: 60 tcaaccttt 68 ||||||||| Sbjct: 326 tcaaccttt 334
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 87.7 bits (44), Expect = 7e-15 Identities = 105/124 (84%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || Sbjct: 4097 agcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatgggg 4156 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||| || |||||| ||||||||||| || | |||||| ||||||| |||||||| Sbjct: 4157 taaccccttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaa 4215 Query: 121 acat 124 |||| Sbjct: 4216 acat 4219
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 87.7 bits (44), Expect = 7e-15 Identities = 105/124 (84%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || Sbjct: 64 agcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatgggg 123 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||| || |||||| ||||||||||| || | |||||| ||||||| |||||||| Sbjct: 124 taaccccttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaa 182 Query: 121 acat 124 |||| Sbjct: 183 acat 186
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 87.7 bits (44), Expect = 7e-15 Identities = 47/48 (97%) Strand = Plus / Plus Query: 77 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 124 |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 64
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 85.7 bits (43), Expect = 3e-14 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 62 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 121 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 122 cat 124 ||| Sbjct: 276 cat 274
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 3e-14 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgc 76 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 79.8 bits (40), Expect = 2e-12 Identities = 104/119 (87%), Gaps = 6/119 (5%) Strand = Plus / Plus Query: 7 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 65 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 66 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 124 ||| ||||| ||||| | |||||| |||| ||||||| ||||||| |||||||||||| Sbjct: 128 ttt--aactg-ctgcttattccatg-gcagacaagaga-aacctggtgaactgaaacat 181
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 79.8 bits (40), Expect = 2e-12 Identities = 104/124 (83%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || Sbjct: 64 agcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatgggg 123 Query: 61 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 120 |||| || |||||| ||||||| ||| || | |||||| ||||||| |||||||| Sbjct: 124 taaccccttgtactgcc-gctgaatacataggcggataagagagaacctggtgaactgaa 182 Query: 121 acat 124 |||| Sbjct: 183 acat 186
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 75.8 bits (38), Expect = 3e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 13 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 70 ||||||||||||| ||| ||||||||||||| |||||||| |||||| |||||||||| Sbjct: 5704 cttcggggagttggaaacaagcatagatccgaagattcccgaatagggcaacctttta 5761
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 75.8 bits (38), Expect = 3e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 13 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 70 ||||||||||||| ||| ||||||||||||| |||||||| |||||| |||||||||| Sbjct: 2767 cttcggggagttggaaacaagcatagatccgaagattcccgaatagggcaacctttta 2824
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 75.8 bits (38), Expect = 3e-11 Identities = 53/58 (91%) Strand = Plus / Plus Query: 13 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 70 ||||||||||||| ||| ||||||||||||| |||||||| |||||| |||||||||| Sbjct: 55 cttcggggagttggaaacaagcatagatccgaagattcccgaatagggcaacctttta 112
>gb|M21453.1|SPICPRGDG Spinach chloroplast 16S ribosomal RNA gene (3' end), Ile-tRNA and Ala-tRNA genes, and 23S ribosomal RNA gene (5' end) Length = 2391 Score = 75.8 bits (38), Expect = 3e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccgg 44 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2350 cgacgaaatgcttcggggagttgaaaataagcagagatccgg 2391
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||||||||||||||| || |||||||| | || |||||||||||| |||||| || Sbjct: 46 cgacgaaatgcttcggggagctggaaataagctttgagccggagattcccgaatagggca 105 Query: 63 acct 66 |||| Sbjct: 106 acct 109
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 67.9 bits (34), Expect = 7e-09 Identities = 100/122 (81%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||| | ||||||||||| || || |||| | |||||| |||||||| |||||| || Sbjct: 53 cgacgatacgcttcggggagctggaatcaagctttgatccgaagattcccgaatagggca 112 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 ||||| || ||| |||| ||||| ||| |||| ||||||||||| |||||| |||||| Sbjct: 113 accttatatacttcctgttgaattcatagacaggtaagagacaacccggcgaattgaaac 172 Query: 123 at 124 || Sbjct: 173 at 174
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 67.9 bits (34), Expect = 7e-09 Identities = 58/66 (87%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 |||||||||||||||||||||| || || ||| ||||||||| |||||||| |||||| Sbjct: 64 agcgacgaaatgcttcggggagctgcgaacaagtatagatccgaagattcccgaataggg 123 Query: 61 caacct 66 |||||| Sbjct: 124 caacct 129
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 67.9 bits (34), Expect = 7e-09 Identities = 37/38 (97%) Strand = Plus / Minus Query: 6 cgaaatgcttcggggagttgaaaataagcatagatccg 43 ||||||||||||||||||||||||||||| |||||||| Sbjct: 248010 cgaaatgcttcggggagttgaaaataagcgtagatccg 247973
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 67.9 bits (34), Expect = 7e-09 Identities = 37/38 (97%) Strand = Plus / Minus Query: 6 cgaaatgcttcggggagttgaaaataagcatagatccg 43 ||||||||||||||||||||||||||||| |||||||| Sbjct: 151746 cgaaatgcttcggggagttgaaaataagcgtagatccg 151709
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 65.9 bits (33), Expect = 3e-08 Identities = 104/125 (83%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaat-agg 59 |||||||||| |||||||||||| ||||| | | ||||||||||||||||| ||| || Sbjct: 64 agcgacgaaacgcttcggggagtcgaaaacagacgtagatccggagattcccgaatgggg 123 Query: 60 tcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactga 119 | | || ||| |||||| ||||||| ||| ||| | |||||||||||||| ||||||| Sbjct: 124 taacccctttgtactgcc-gctgaattcataagcggataagagacaacctggtgaactga 182 Query: 120 aacat 124 ||||| Sbjct: 183 aacat 187
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 63.9 bits (32), Expect = 1e-07 Identities = 72/84 (85%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 41 ccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag 100 |||||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||| Sbjct: 505 ccggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaag 563 Query: 101 agacaacctggcgaactgaaacat 124 ||||||||||| |||||||||||| Sbjct: 564 agacaacctggtgaactgaaacat 587
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 63.9 bits (32), Expect = 1e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 104 Query: 63 acct 66 |||| Sbjct: 105 acct 108
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 63.9 bits (32), Expect = 1e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 63 acct 66 |||| Sbjct: 24914 acct 24917
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 63.9 bits (32), Expect = 1e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 39 atccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggca 98 |||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||| Sbjct: 63009 atccggagattcccgaataggtcaacctttcgaact-actgctgaatccatgggcaggca 62951 Score = 63.9 bits (32), Expect = 1e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 93 caggcaagagacaacctggcgaactgaaacat 124 |||||||||||||||||||||||||||||||| Sbjct: 43316 caggcaagagacaacctggcgaactgaaacat 43347 Score = 56.0 bits (28), Expect = 3e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 93 caggcaagagacaacctggcgaactgaaacat 124 ||||||||||| |||||||||||||||||||| Sbjct: 40844 caggcaagagataacctggcgaactgaaacat 40875
>gb|DQ001754.1| Citrus reticulata voucher P.M. McNutt 019 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2728 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2698 agcgacgaaatgcttcggggagttgaaaata 2728
>gb|DQ001752.1| Salix nigra voucher P.M. McNutt 003 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2691 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2661 agcgacgaaatgcttcggggagttgaaaata 2691
>gb|DQ001751.1| Rosa hybrid cultivar voucher P.M. McNutt 017 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2551 agcgacgaaatgcttcggggagttgaaaata 2581
>gb|DQ001750.1| Cucurbita pepo voucher P.M. McNutt 025 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2551 agcgacgaaatgcttcggggagttgaaaata 2581
>gb|DQ001749.1| Cucurbita pepo voucher P.M. McNutt 015 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2578 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2548 agcgacgaaatgcttcggggagttgaaaata 2578
>gb|DQ001748.1| Fragaria vesca voucher P.M. McNutt 020 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2737 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2707 agcgacgaaatgcttcggggagttgaaaata 2737
>gb|DQ001742.1| Daucus carota voucher P.M. McNutt 005 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2698 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2668 agcgacgaaatgcttcggggagttgaaaata 2698
>gb|DQ001741.1| Dahlia hybrid cultivar voucher P.M. McNutt 007 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2554 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2524 agcgacgaaatgcttcggggagttgaaaata 2554
>gb|DQ001740.1| Helianthus annuus voucher P.M. McNutt 021 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2551 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2521 agcgacgaaatgcttcggggagttgaaaata 2551
>gb|DQ001739.1| Lactuca sativa voucher P.M. McNutt 016 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2717 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2687 agcgacgaaatgcttcggggagttgaaaata 2717
>gb|DQ001738.1| Lactuca sativa voucher P.M. McNutt 004 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2683 agcgacgaaatgcttcggggagttgaaaata 2713
>gb|DQ001736.1| Eschscholzia californica voucher P.M. McNutt 014 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2694 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2664 agcgacgaaatgcttcggggagttgaaaata 2694
>gb|DQ001735.1| Lemna gibba voucher P.M. McNutt 008 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2510 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2480 agcgacgaaatgcttcggggagttgaaaata 2510
>gb|DQ001734.1| Dracaena sanderiana voucher P.M. McNutt 011 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2683 agcgacgaaatgcttcggggagttgaaaata 2713
>gb|DQ001733.1| Musa acuminata voucher P.M. McNutt 001 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2721 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2691 agcgacgaaatgcttcggggagttgaaaata 2721
>gb|DQ001732.1| Lolium perenne voucher P.M. McNutt 018 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2589 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2559 agcgacgaaatgcttcggggagttgaaaata 2589
>gb|DQ001731.1| Secale cereale voucher P.M. McNutt 006 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2582 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 2552 agcgacgaaatgcttcggggagttgaaaata 2582
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 61.9 bits (31), Expect = 4e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 59 |||||||||||||||||||||| || || ||||||| ||||| |||||||| |||||| Sbjct: 64 agcgacgaaatgcttcggggagctgcgaacaagcataaatccgaagattcccgaatagg 122
>dbj|AK061298.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E04, full insert sequence Length = 986 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||||| Sbjct: 55 agcgacgaaatgcttcggggagttgaaaata 85
>gb|AY768371.1| Leptolyngbya sp. PCC 73110 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 687 Score = 60.0 bits (30), Expect = 2e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||| ||||||||||||| || || ||||||| |||||| ||||| || |||||| || Sbjct: 554 cgacgatatgcttcggggagctggaagtaagcattgatccgaagatttccgaatagggca 613 Query: 63 accttt 68 |||||| Sbjct: 614 accttt 619
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc 52 |||||||| |||||||||||||| ||| |||||| |||||| |||||||| Sbjct: 53 cgacgaaacgcttcggggagttggaaacaagcattgatccgaagattccc 102
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 60.0 bits (30), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| |||||||||||||| ||| ||||| |||||| |||||||| |||||| | Sbjct: 191904 cgacgaaacgcttcggggagttggaaacgagcattgatccgaagattcccgaatagggaa 191963 Query: 63 accttttaaactgc 76 |||| | ||||||| Sbjct: 191964 acctgtaaaactgc 191977 Score = 60.0 bits (30), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| |||||||||||||| ||| ||||| |||||| |||||||| |||||| | Sbjct: 144878 cgacgaaacgcttcggggagttggaaacgagcattgatccgaagattcccgaatagggaa 144819 Query: 63 accttttaaactgc 76 |||| | ||||||| Sbjct: 144818 acctgtaaaactgc 144805
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 60.0 bits (30), Expect = 2e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 60 ||||||||||||||| |||||| || || ||| ||||||||| |||||||| |||||| Sbjct: 3098 agcgacgaaatgctttggggagctgcgaacaagtatagatccgaagattcccgaataggg 3157 Query: 61 caacct 66 |||||| Sbjct: 3158 caacct 3163
>gb|DQ001747.1| Nicotiana tabacum voucher P.M. McNutt 023 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2379 Score = 58.0 bits (29), Expect = 6e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||| Sbjct: 2351 cgacgaaatgcttcggggagttgaaaata 2379
>gb|DQ001746.1| Lycopersicon esculentum voucher P.M. McNutt 024 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2494 Score = 58.0 bits (29), Expect = 6e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||| Sbjct: 2466 cgacgaaatgcttcggggagttgaaaata 2494
>gb|DQ001745.1| Solanum tuberosum voucher P.M. McNutt 010 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2495 Score = 58.0 bits (29), Expect = 6e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||| Sbjct: 2467 cgacgaaatgcttcggggagttgaaaata 2495
>gb|DQ001744.1| Ocimum basilicum voucher P.M. McNutt 002 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2717 Score = 58.0 bits (29), Expect = 6e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||| Sbjct: 2689 cgacgaaatgcttcggggagttgaaaata 2717
>gb|DQ001743.1| Mentha x piperita voucher P.M. McNutt 012 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2734 Score = 58.0 bits (29), Expect = 6e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaata 31 ||||||||||||||||||||||||||||| Sbjct: 2706 cgacgaaatgcttcggggagttgaaaata 2734
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 58.0 bits (29), Expect = 6e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 96 gcaagagacaacctggcgaactgaaacat 124 ||||||||||||||||||||||||||||| Sbjct: 147 gcaagagacaacctggcgaactgaaacat 175 Score = 52.0 bits (26), Expect = 4e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagat 48 ||||||||||||||||||||||| ||| | || |||||||||||| Sbjct: 66 cgacgaaatgcttcggggagttggaaagaggctgagatccggagat 111
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 56.0 bits (28), Expect = 3e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||||||||||| || ||| |||| | |||||| |||||||| |||||| || Sbjct: 53 cgacgaaacgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggca 112 Query: 63 acct 66 |||| Sbjct: 113 acct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 56.0 bits (28), Expect = 3e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||||||||||| || ||| |||| | |||||| |||||||| |||||| || Sbjct: 1819 cgacgaaacgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggca 1878 Query: 63 acct 66 |||| Sbjct: 1879 acct 1882
>dbj|AK109207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C10, full insert sequence Length = 777 Score = 56.0 bits (28), Expect = 3e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaa 28 |||||||||||||||||||||||||||| Sbjct: 54 agcgacgaaatgcttcggggagttgaaa 81
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 54.0 bits (27), Expect = 1e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 12 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 66 ||||||||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 54.0 bits (27), Expect = 1e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 12 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 66 ||||||||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 54.0 bits (27), Expect = 1e-04 Identities = 56/63 (88%), Gaps = 2/63 (3%) Strand = Plus / Plus Query: 5 acgaaatgcttcggggagttgaaaataagc-atagatccggagattcccaaataggtcaa 63 |||||||||||||||||| || ||| |||| ||| |||||||||||||| |||||| ||| Sbjct: 55 acgaaatgcttcggggagctggaaacaagctata-atccggagattcccgaatagggcaa 113 Query: 64 cct 66 ||| Sbjct: 114 cct 116
>gb|DQ001755.1| Physcomitrella patens voucher P.M. McNutt 013 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2405 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaata 31 |||||||||||||||||||||| |||||||| Sbjct: 2375 agcgacgaaatgcttcggggagctgaaaata 2405
>gb|DQ001737.1| Hatiora gaertneri voucher P.M. McNutt 009 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2794 Score = 54.0 bits (27), Expect = 1e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaa 29 ||||||||||||||||||||||||||| Sbjct: 2766 cgacgaaatgcttcggggagttgaaaa 2792
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 54.0 bits (27), Expect = 1e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 38 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 97 ||||||||||| ||| |||||| ||||| |||||||| |||||||| || |||| | Sbjct: 56 gatccggagatccccgaatagggtaacctaataaactgc-tgctgaatatataggcagac 114 Query: 98 aagagacaacctggcgaactgaaacat 124 ||||| |||||||||||||||||||| Sbjct: 115 gagagataacctggcgaactgaaacat 141
>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1 Length = 2749 Score = 54.0 bits (27), Expect = 1e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 12 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 66 ||||||||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1 Length = 2676 Score = 54.0 bits (27), Expect = 1e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 12 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 66 ||||||||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 54.0 bits (27), Expect = 1e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 59 |||||||||||||||||||||| || || ||| ||| ||||| |||||||| |||||| Sbjct: 1831 agcgacgaaatgcttcggggagctgcgaacaagtataaatccgaagattcccgaatagg 1889
>gb|AF342859.1| Fusobacterium prausnitzii strain ATCC 27766 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 854 Score = 52.0 bits (26), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 12 gcttcggggagttgaaaataagcatagatccggagatt 49 ||||||||||| || |||||||||| |||||||||||| Sbjct: 453 gcttcggggagctgcaaataagcattgatccggagatt 490
>gb|AF342858.1| Fusobacterium prausnitzii strain ATCC 27768 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 854 Score = 52.0 bits (26), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 12 gcttcggggagttgaaaataagcatagatccggagatt 49 ||||||||||| || |||||||||| |||||||||||| Sbjct: 453 gcttcggggagctgcaaataagcattgatccggagatt 490
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 52.0 bits (26), Expect = 4e-04 Identities = 98/122 (80%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 63 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 122 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 123 at 124 || Sbjct: 165 at 166
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 52.0 bits (26), Expect = 4e-04 Identities = 56/66 (84%) Strand = Plus / Plus Query: 5 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 64 ||||||||||||| |||| || ||| |||| ||| ||||||||||| |||||| |||| Sbjct: 168 acgaaatgcttcgaggagctggaaacaagctatgattcggagattcccgaatagggcaac 227 Query: 65 ctttta 70 |||||| Sbjct: 228 ctttta 233
>gb|AY436774.1| Pyrus communis cytochrome P450 monooxygenase mRNA, partial cds Length = 175 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 100 gagacaacctggcgaactgaaacat 124 ||||||||||||||||||||||||| Sbjct: 134 gagacaacctggcgaactgaaacat 158
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 50.1 bits (25), Expect = 0.002 Identities = 52/61 (85%) Strand = Plus / Plus Query: 6 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 65 ||||| ||||||||||| || || ||||||||||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatagatccgaagatccccgaatagggcaacc 108 Query: 66 t 66 | Sbjct: 109 t 109
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 50.1 bits (25), Expect = 0.002 Identities = 58/69 (84%) Strand = Plus / Plus Query: 6 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 65 ||||| ||||||||||| || || |||| | |||||| |||||||| |||||| ||||| Sbjct: 67 cgaaacgcttcggggagctggcaacaagctttgatccgaagattcccgaatagggcaacc 126 Query: 66 ttttaaact 74 | ||||||| Sbjct: 127 tattaaact 135
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 50.1 bits (25), Expect = 0.002 Identities = 52/61 (85%) Strand = Plus / Plus Query: 5 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 64 |||||||||||||||||| || ||| |||| ||||||||||||||| ||| || |||| Sbjct: 48 acgaaatgcttcggggagctggaaacaagctacgatccggagattcccgaatggggcaac 107 Query: 65 c 65 | Sbjct: 108 c 108
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 50.1 bits (25), Expect = 0.002 Identities = 52/61 (85%) Strand = Plus / Plus Query: 5 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 64 |||||||||||||||||| || ||| |||| ||||||||||||||| ||| || |||| Sbjct: 1929 acgaaatgcttcggggagctggaaacaagctacgatccggagattcccgaatggggcaac 1988 Query: 65 c 65 | Sbjct: 1989 c 1989
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 50.1 bits (25), Expect = 0.002 Identities = 58/69 (84%) Strand = Plus / Plus Query: 6 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 65 ||||| ||||||||||| || || |||| | |||||| |||||||| |||||| ||||| Sbjct: 67 cgaaacgcttcggggagctggcaacaagctttgatccgaagattcccgaatagggcaacc 126 Query: 66 ttttaaact 74 | ||||||| Sbjct: 127 tattaaact 135
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 48.1 bits (24), Expect = 0.006 Identities = 54/64 (84%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| |||||| |||| || ||| ||||| ||| ||||||||||| |||||| || Sbjct: 46 cgacgaaacgcttcgaggagctggaaacaagcaatgattcggagattcccgaatagggca 105 Query: 63 acct 66 |||| Sbjct: 106 acct 109
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 48.1 bits (24), Expect = 0.006 Identities = 54/64 (84%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 53 cgacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggca 112 Query: 63 acct 66 |||| Sbjct: 113 acct 116
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 48.1 bits (24), Expect = 0.006 Identities = 54/64 (84%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 115610 cgacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggca 115551 Query: 63 acct 66 |||| Sbjct: 115550 acct 115547 Score = 48.1 bits (24), Expect = 0.006 Identities = 54/64 (84%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 62 |||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 86378 cgacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggca 86437 Query: 63 acct 66 |||| Sbjct: 86438 acct 86441
>gb|DQ001753.1| Lathyrus odoratus voucher P.M. McNutt 022 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2668 Score = 48.1 bits (24), Expect = 0.006 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1 agcgacgaaatgcttcggggagtt 24 |||||||||||||||||||||||| Sbjct: 2636 agcgacgaaatgcttcggggagtt 2659
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 48.1 bits (24), Expect = 0.006 Identities = 39/44 (88%) Strand = Plus / Plus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggag 46 |||||||| ||||||||||| || ||| |||||| ||||||||| Sbjct: 3327072 cgacgaaacgcttcggggagctggaaacaagcattgatccggag 3327115 Score = 48.1 bits (24), Expect = 0.006 Identities = 39/44 (88%) Strand = Plus / Minus Query: 3 cgacgaaatgcttcggggagttgaaaataagcatagatccggag 46 |||||||| ||||||||||| || ||| |||||| ||||||||| Sbjct: 2451656 cgacgaaacgcttcggggagctggaaacaagcattgatccggag 2451613
>gb|AF268220.2| Uncultured proteobacterium EBAC40E09 16S ribosomal RNA gene, partial sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence Length = 3642 Score = 46.1 bits (23), Expect = 0.024 Identities = 26/27 (96%) Strand = Plus / Plus Query: 98 aagagacaacctggcgaactgaaacat 124 |||||||||||||| |||||||||||| Sbjct: 2014 aagagacaacctggagaactgaaacat 2040
>gb|AY793817.1| Uncultured organism clone SIMO1-M13F_H02 unknown mRNA Length = 248 Score = 46.1 bits (23), Expect = 0.024 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 aagagacaacctggcgaactgaaacat 124 |||||||||||||| |||||||||||| Sbjct: 104 aagagacaacctggagaactgaaacat 78
>gb|AY793816.1| Uncultured organism clone SIMO1-M13F_H01 unknown mRNA Length = 248 Score = 46.1 bits (23), Expect = 0.024 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 aagagacaacctggcgaactgaaacat 124 |||||||||||||| |||||||||||| Sbjct: 104 aagagacaacctggagaactgaaacat 78
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 46.1 bits (23), Expect = 0.024 Identities = 47/55 (85%) Strand = Plus / Plus Query: 12 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 66 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3498 Score = 46.1 bits (23), Expect = 0.024 Identities = 47/55 (85%) Strand = Plus / Plus Query: 12 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 66 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,000,280 Number of Sequences: 3902068 Number of extensions: 1000280 Number of successful extensions: 59209 Number of sequences better than 10.0: 394 Number of HSP's better than 10.0 without gapping: 395 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 58278 Number of HSP's gapped (non-prelim): 780 length of query: 127 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 106 effective length of database: 17,151,101,840 effective search space: 1818016795040 effective search space used: 1818016795040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
