ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2k06 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 261 bits (668), Expect = 2e-70 Identities = 125/136 (91%), Positives = 131/136 (96%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 181 MA+TTMSLSS +FAGKAVKNLPSS++ G+ARV MRKTAAKAKQV+S SPWYGSDRVLYLG Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLG 60 Query: 182 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 361 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 61 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120 Query: 362 RNGVKFGEAVWFKAGS 409 RNGVKFGEA WFKAGS Sbjct: 121 RNGVKFGEAGWFKAGS 136
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 250 bits (639), Expect = 5e-67 Identities = 127/137 (92%), Positives = 130/137 (94%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVA-SGSPWYGSDRVLYL 178 MAS+TM+LSS AFAGKAV N+PSSS FGEARVTMRKTAAKAK A SGSPWYG DRVLYL Sbjct: 1 MASSTMALSSTAFAGKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 119 ARNGVKFGEAVWFKAGS 135
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 245 bits (626), Expect = 2e-65 Identities = 125/137 (91%), Positives = 129/137 (94%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVAS-GSPWYGSDRVLYL 178 MAS+TM+LSS AFAGKAV N+PSS +FGEARVTMRKTAAKAK AS GSPWYG DRVLYL Sbjct: 1 MASSTMALSSTAFAGKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 119 ARNGVKFGEAVWFKAGS 135
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 240 bits (613), Expect = 5e-64 Identities = 117/137 (85%), Positives = 125/137 (91%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++TM+LSS +FAGKAVK PSSS + G +VTMRKTA+KAK V+SGSPWYG DRV YL Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 121 ARNGVKFGEAVWFKAGS 137
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 239 bits (611), Expect = 9e-64 Identities = 117/137 (85%), Positives = 122/137 (89%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++TM+LSS FAGKAVK PSSS + G RVTMRKTA KAK +SGSPWYG DRV YL Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 121 ARNGVKFGEAVWFKAGS 137
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 237 bits (605), Expect = 4e-63 Identities = 115/137 (83%), Positives = 122/137 (89%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+ TM+LSS +FAGKAVK PSSS + G +VTMRKT KAK ++SGSPWYG DRV YL Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 121 ARNGVKFGEAVWFKAGS 137
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 236 bits (603), Expect = 7e-63 Identities = 115/136 (84%), Positives = 122/136 (89%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 181 MA+ TM+LSS A AGKA ++ VFGE R+TMRK+AAK K ASGSPWYG+DRVLYLG Sbjct: 1 MAAATMALSSPALAGKA-----AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLG 55 Query: 182 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 361 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115 Query: 362 RNGVKFGEAVWFKAGS 409 RNGVKFGEAVWFKAGS Sbjct: 116 RNGVKFGEAVWFKAGS 131
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 235 bits (599), Expect = 2e-62 Identities = 114/137 (83%), Positives = 123/137 (89%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++TM+LSS +FAGKAVK PSSS + G +VTMRKTA+KAK V+S SPWYG +RV YL Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFK GS Sbjct: 121 ARNGVKFGEAVWFKGGS 137 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +2 Query: 185 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 364 ++GEP + +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237 Query: 365 NG 370 G Sbjct: 238 KG 239
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 234 bits (597), Expect = 4e-62 Identities = 114/137 (83%), Positives = 121/137 (88%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MAS+TM+LSS + AGKAVK P++S + GE R+TMRKTA K K V S SPWYG DRV YL Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 121 ARNGVKFGEAVWFKAGS 137
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 233 bits (595), Expect = 6e-62 Identities = 114/137 (83%), Positives = 120/137 (87%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+ TM+LSS +FAGKAVK PSSS + G + TMRKT KAK V+SGSPWYG DRV YL Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 121 ARNGVKFGEAVWFKAGS 137
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 233 bits (595), Expect = 6e-62 Identities = 117/137 (85%), Positives = 123/137 (89%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++T +LSS FAGKAVK PSSS V G +VTMRKTA+KAK V+SGSPWYG DRV YL Sbjct: 1 MAASTTALSSP-FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 59 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 120 ARNGVKFGEAVWFKAGS 136
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 233 bits (593), Expect = 1e-61 Identities = 113/137 (82%), Positives = 118/137 (86%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+ TM+LSS FAGK VK PSSS + G + TMRKTA KAK V+SGSPWYG DRV YL Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVW KAGS Sbjct: 121 ARNGVKFGEAVWLKAGS 137
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 233 bits (593), Expect = 1e-61 Identities = 113/137 (82%), Positives = 121/137 (88%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+ TM++SS +FAGKAV N+PSSS + G + TMRKT KAK V+SGSPWYG DRV YL Sbjct: 1 MAAATMAISSSSFAGKAV-NVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 59 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 119 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 120 ARNGVKFGEAVWFKAGS 136
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 232 bits (592), Expect = 1e-61 Identities = 117/137 (85%), Positives = 122/137 (89%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++T +LSS FAGKAVK PSSS V G +VTMRKTA KAK V+SGSPWYG DRV YL Sbjct: 1 MAASTTALSSP-FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYL 59 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 120 ARNGVKFGEAVWFKAGS 136 Score = 30.4 bits (67), Expect = 1.0 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = +2 Query: 185 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 364 ++GEP + +D GL+ DPE FA+ + E+ + R AM G L+ Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236 Query: 365 NG 370 G Sbjct: 237 KG 238
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 231 bits (589), Expect = 3e-61 Identities = 112/137 (81%), Positives = 119/137 (86%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 M ++TM+LSS +FAG AVK PSSS + G + MRKT KAK V+SGSPWYG DRV YL Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 121 ARNGVKFGEAVWFKAGS 137
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 231 bits (589), Expect = 3e-61 Identities = 115/137 (83%), Positives = 120/137 (87%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++TM+LSS AFAGKAVK P +S VFG RVTMRKT SGSPWYGSDRV YL Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELL Sbjct: 59 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 119 ARNGVKFGEAVWFKAGS 135
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 230 bits (586), Expect = 7e-61 Identities = 115/137 (83%), Positives = 121/137 (88%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVAS-GSPWYGSDRVLYL 178 MA+ TM+LSS A A SS++FGEAR+TMRKTAAK K AS GSPWYG+DRVLYL Sbjct: 1 MAAATMALSSPVMARAAPST--SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 119 ARNGVKFGEAVWFKAGS 135
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 229 bits (583), Expect = 2e-60 Identities = 115/137 (83%), Positives = 121/137 (88%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++TM+LSS AFAGKAVK P++S V G RVTMRKT AK K SGSPWYGSDRV YL Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 59 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELL Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 120 ARNGVKFGEAVWFKAGS 136
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 228 bits (581), Expect = 3e-60 Identities = 110/137 (80%), Positives = 118/137 (86%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+TTM+LSS +FAGKAVK SSS + G +VTMRKT KAK +S SPWYG DRV YL Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 61 GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNG+KFGEAVWFKAG+ Sbjct: 121 ARNGIKFGEAVWFKAGA 137
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 227 bits (578), Expect = 6e-60 Identities = 114/137 (83%), Positives = 120/137 (87%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++TM+LSS AFAGKAV P++S V G RVTMRKT AK K SGSPWYGSDRV YL Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 59 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELL Sbjct: 60 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 120 ARNGVKFGEAVWFKAGS 136
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 226 bits (577), Expect = 8e-60 Identities = 111/137 (81%), Positives = 119/137 (86%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+ TM+LSS +FAGKAV N+PSSS + +VTMRKT KAK V+SGSPWYG DRV YL Sbjct: 1 MAAATMALSSSSFAGKAV-NVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYL 59 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELF 119 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 120 ARNGVKFGEAVWFKAGS 136
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 226 bits (575), Expect = 1e-59 Identities = 115/137 (83%), Positives = 119/137 (86%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+ TM+LSS FAGKAVKNL SSS V G+ARV+MRKTAA K GSPWYG DRV YL Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYL 57 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL Sbjct: 58 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELL 117 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFK GS Sbjct: 118 ARNGVKFGEAVWFKKGS 134
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 225 bits (574), Expect = 2e-59 Identities = 112/137 (81%), Positives = 119/137 (86%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSS-SVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+ TM+LSS +FAG+AVK PS+ + G RV+MRKT AK VAS SPWYG DRV YL Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 59 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 119 ARNGVKFGEAVWFKAGS 135
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 224 bits (570), Expect = 5e-59 Identities = 111/137 (81%), Positives = 118/137 (86%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA+ TM+LSS +FAG+AVK PS+S + G R+TMRK A AK S SPWYG DRV YL Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 59 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 119 ARNGVKFGEAVWFKAGS 135
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 224 bits (570), Expect = 5e-59 Identities = 108/136 (79%), Positives = 115/136 (84%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 181 MA++TM++SS A AG +K FGE R+TMRKT K K ASGSPWYG DRV YLG Sbjct: 1 MAASTMAISSTAMAGTPIK----VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLG 56 Query: 182 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 361 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+ Sbjct: 57 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 116 Query: 362 RNGVKFGEAVWFKAGS 409 RNGVKFGEAVWFKAGS Sbjct: 117 RNGVKFGEAVWFKAGS 132
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 221 bits (564), Expect = 2e-58 Identities = 105/136 (77%), Positives = 114/136 (83%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 181 MA+ TM+++S+A GK + VFGE R+TMRKTAAK K SGSPWYG+DRVLYLG Sbjct: 1 MAAATMAITSRALVGKPAAG--TRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLG 58 Query: 182 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 361 PLSG PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELLA Sbjct: 59 PLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLA 118 Query: 362 RNGVKFGEAVWFKAGS 409 RNGVKFGE VWFKAGS Sbjct: 119 RNGVKFGEGVWFKAGS 134
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 221 bits (564), Expect = 2e-58 Identities = 112/137 (81%), Positives = 117/137 (85%), Gaps = 1/137 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 MA++TM+LSS A AGKAVK PSSS +FG RV+MRKT K S SPWYG DRV YL Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYL 57 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL Sbjct: 58 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117 Query: 359 ARNGVKFGEAVWFKAGS 409 ARNGVKFGEAVWFKAGS Sbjct: 118 ARNGVKFGEAVWFKAGS 134
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 219 bits (557), Expect = 2e-57 Identities = 105/135 (77%), Positives = 114/135 (84%) Frame = +2 Query: 5 ASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGP 184 +S++M+LSS AGK +K PSS G AR TMRK+A K +SGSPWYG DRV YLGP Sbjct: 5 SSSSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGP 64 Query: 185 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 364 SGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+R Sbjct: 65 FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 124 Query: 365 NGVKFGEAVWFKAGS 409 NGVKFGEAVWFKAGS Sbjct: 125 NGVKFGEAVWFKAGS 139
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 218 bits (556), Expect = 2e-57 Identities = 109/135 (80%), Positives = 118/135 (87%) Frame = +2 Query: 5 ASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGP 184 A+++M+LSS + AGKAVK PS+ G RV+MRKT K QV+SGSPWYG DRV YLGP Sbjct: 3 AASSMALSSPSLAGKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGP 58 Query: 185 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 364 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R Sbjct: 59 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 118 Query: 365 NGVKFGEAVWFKAGS 409 NGVKFGEAVWFKAGS Sbjct: 119 NGVKFGEAVWFKAGS 133
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 215 bits (547), Expect = 2e-56 Identities = 105/138 (76%), Positives = 114/138 (82%), Gaps = 2/138 (1%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNL--PSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLY 175 MA+++M+LSS GK V+ PSS G AR TMRK+A K +SGSPWYG DRV Y Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60 Query: 176 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 355 LGP SGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL Sbjct: 61 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120 Query: 356 LARNGVKFGEAVWFKAGS 409 L+RNGVKFGEAVWFKAGS Sbjct: 121 LSRNGVKFGEAVWFKAGS 138
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 209 bits (532), Expect = 1e-54 Identities = 102/124 (82%), Positives = 111/124 (89%), Gaps = 1/124 (0%) Frame = +2 Query: 41 AGKAVKNLPSS-SVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTG 217 AG+AVK P++ + G A+ TMRKTA+K+ V+SGSPWYG DRV YLGP SGEPPSYLTG Sbjct: 4 AGQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTG 61 Query: 218 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 397 EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWF Sbjct: 62 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 121 Query: 398 KAGS 409 KAGS Sbjct: 122 KAGS 125
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 209 bits (531), Expect = 2e-54 Identities = 105/139 (75%), Positives = 110/139 (79%), Gaps = 10/139 (7%) Frame = +2 Query: 23 LSSQAFAGKAVKNLP---------SSSVFGEARVTMRK-TAAKAKQVASGSPWYGSDRVL 172 + S AFAG + +L + V GEARVTMRK T K AS SPWYG DRVL Sbjct: 6 IGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVL 65 Query: 173 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 352 YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPE Sbjct: 66 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPE 125 Query: 353 LLARNGVKFGEAVWFKAGS 409 LLARNGVKFGEAVWFKAG+ Sbjct: 126 LLARNGVKFGEAVWFKAGA 144
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 204 bits (519), Expect = 4e-53 Identities = 98/115 (85%), Positives = 102/115 (88%) Frame = +2 Query: 65 PSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 244 PS+ G RV+MRKTA+K V+SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWD Sbjct: 3 PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60 Query: 245 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 409 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAGS Sbjct: 61 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGS 115
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 202 bits (513), Expect = 2e-52 Identities = 105/148 (70%), Positives = 112/148 (75%), Gaps = 12/148 (8%) Frame = +2 Query: 2 MASTTMSL---SSQAFAGKAVKNLPSSS--------VFGEARVTMRKTAAKAKQVAS-GS 145 MA+T S S AFAG + ++ + GEAR+TMRK K AS S Sbjct: 1 MATTMASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDS 60 Query: 146 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 325 PWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML Sbjct: 61 PWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120 Query: 326 GALGCVFPELLARNGVKFGEAVWFKAGS 409 GALGCVFPELLARNGVKFGEAVWFKAG+ Sbjct: 121 GALGCVFPELLARNGVKFGEAVWFKAGA 148
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 200 bits (508), Expect = 8e-52 Identities = 103/148 (69%), Positives = 112/148 (75%), Gaps = 12/148 (8%) Frame = +2 Query: 2 MASTTMSL---SSQAFAGKAVKNLPSSS--------VFGEARVTMRKTAAKAKQVAS-GS 145 MA+T S S AFAG + ++ + GEAR+TMRK + AS S Sbjct: 1 MATTMASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDS 60 Query: 146 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 325 PWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML Sbjct: 61 PWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120 Query: 326 GALGCVFPELLARNGVKFGEAVWFKAGS 409 GALGCVFPELLARNGVKFGEAVWFKAG+ Sbjct: 121 GALGCVFPELLARNGVKFGEAVWFKAGA 148
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 192 bits (489), Expect = 1e-49 Identities = 101/139 (72%), Positives = 109/139 (78%), Gaps = 3/139 (2%) Frame = +2 Query: 2 MASTTMSLSSQAFAG---KAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVL 172 MA++T +L+S F+G K V L GEARV M +KA SGS WYGSDR L Sbjct: 1 MATSTAALTS-TFSGQQLKPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPL 56 Query: 173 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 352 YLGP SG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE Sbjct: 57 YLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 116 Query: 353 LLARNGVKFGEAVWFKAGS 409 LLA+NGVKFGEAVWFKAGS Sbjct: 117 LLAKNGVKFGEAVWFKAGS 135
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 192 bits (488), Expect = 2e-49 Identities = 100/136 (73%), Positives = 109/136 (80%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 181 MA++TM+LSS + AG+A+K PS+ G RV+MRKTA K V+SGSPWYG DRV YLG Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLG 58 Query: 182 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 361 P SGE PSYLTGEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLA Sbjct: 59 PFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 110 Query: 362 RNGVKFGEAVWFKAGS 409 RNGVKFGEAVWFKAGS Sbjct: 111 RNGVKFGEAVWFKAGS 126
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 192 bits (487), Expect = 2e-49 Identities = 93/137 (67%), Positives = 105/137 (76%), Gaps = 5/137 (3%) Frame = +2 Query: 14 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 T ++ AF G+AV + + FGE R+TMR+T A Q S WYG DR YL Sbjct: 3 TCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQ----SIWYGEDRPKYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L Sbjct: 59 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEIL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ++NGVKFGEAVWFKAGS Sbjct: 119 SKNGVKFGEAVWFKAGS 135
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 184 bits (468), Expect = 3e-47 Identities = 91/137 (66%), Positives = 101/137 (73%), Gaps = 5/137 (3%) Frame = +2 Query: 14 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 T ++ AFAG+ + V FG R TMR+T A Q S WYG DR YL Sbjct: 3 TSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQ----SIWYGEDRPKYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L Sbjct: 59 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEIL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ++NGV FGEAVWFKAGS Sbjct: 119 SKNGVTFGEAVWFKAGS 135
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 184 bits (468), Expect = 3e-47 Identities = 91/137 (66%), Positives = 101/137 (73%), Gaps = 5/137 (3%) Frame = +2 Query: 14 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 T ++ AFAG+ + V F R TMR+T A Q S WYG DR YL Sbjct: 3 TSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQ----SIWYGEDRPKYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L Sbjct: 59 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEIL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ++NGVKFGEAVWFKAGS Sbjct: 119 SKNGVKFGEAVWFKAGS 135
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 183 bits (465), Expect = 7e-47 Identities = 94/136 (69%), Positives = 104/136 (76%), Gaps = 4/136 (2%) Frame = +2 Query: 14 TMSLSSQAFAGKAV---KNLPSSSVFGEA-RVTMRKTAAKAKQVASGSPWYGSDRVLYLG 181 T ++ AFAG+ + +N V G RV+MR+T A + S WYG DR YLG Sbjct: 3 TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPE----SIWYGPDRPKYLG 58 Query: 182 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 361 P S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA Sbjct: 59 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118 Query: 362 RNGVKFGEAVWFKAGS 409 +NGVKFGEAVWFKAGS Sbjct: 119 KNGVKFGEAVWFKAGS 134
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 182 bits (462), Expect = 2e-46 Identities = 91/137 (66%), Positives = 101/137 (73%), Gaps = 5/137 (3%) Frame = +2 Query: 14 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 T ++ AFAG+ + V G RV+MR+T A S WYG DR YL Sbjct: 3 TSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPT----SIWYGPDRPKYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L Sbjct: 59 GPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEIL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 ++NGVKFGEAVWFKAGS Sbjct: 119 SKNGVKFGEAVWFKAGS 135
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 180 bits (456), Expect = 8e-46 Identities = 90/137 (65%), Positives = 100/137 (72%), Gaps = 5/137 (3%) Frame = +2 Query: 14 TMSLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 T ++ AF GK + + FG+AR TMR+T A + S WYG DR YL Sbjct: 3 TSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPE----SIWYGPDRPKYL 58 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL Sbjct: 59 GPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELL 118 Query: 359 ARNGVKFGEAVWFKAGS 409 +NGVKFGEAVWFKAGS Sbjct: 119 EKNGVKFGEAVWFKAGS 135
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 179 bits (455), Expect = 1e-45 Identities = 83/95 (87%), Positives = 86/95 (90%) Frame = +2 Query: 125 KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 304 K +S SPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 305 HCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 409 H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS Sbjct: 64 HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS 98
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 179 bits (454), Expect = 1e-45 Identities = 85/110 (77%), Positives = 91/110 (82%) Frame = +2 Query: 80 FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 259 F RVTMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 260 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 409 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGS Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGS 107
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 178 bits (452), Expect = 2e-45 Identities = 87/139 (62%), Positives = 103/139 (74%), Gaps = 5/139 (3%) Frame = +2 Query: 8 STTMSLSSQAFAGKAVKNLPSSSVF-----GEARVTMRKTAAKAKQVASGSPWYGSDRVL 172 +T ++ S + AG+ + + + +AR+TMR+T A + S WYG DR Sbjct: 2 ATASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPE----SIWYGPDRPK 57 Query: 173 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 352 YLGP S PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPE Sbjct: 58 YLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117 Query: 353 LLARNGVKFGEAVWFKAGS 409 LLA+NG+KFGEAVWFKAG+ Sbjct: 118 LLAKNGLKFGEAVWFKAGA 136
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 176 bits (447), Expect = 9e-45 Identities = 92/141 (65%), Positives = 110/141 (78%), Gaps = 5/141 (3%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVK---NLPSSSVFG--EARVTMRKTAAKAKQVASGSPWYGSDR 166 MA+ T ++ S A AG+++ N S V G EARVTMR+T +K+ S + WYG+DR Sbjct: 1 MAAAT-AMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKS--AGSDTIWYGADR 57 Query: 167 VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 346 +LGP SGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ Sbjct: 58 PKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLT 117 Query: 347 PELLARNGVKFGEAVWFKAGS 409 PELLA++GVKFGEAVWFKAG+ Sbjct: 118 PELLAKSGVKFGEAVWFKAGA 138 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +2 Query: 221 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 370 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 175 bits (443), Expect = 3e-44 Identities = 82/106 (77%), Positives = 90/106 (84%) Frame = +2 Query: 92 RVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 271 R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 272 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 409 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+ Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGA 133 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +2 Query: 221 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 370 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 173 bits (438), Expect = 1e-43 Identities = 85/134 (63%), Positives = 99/134 (73%), Gaps = 4/134 (2%) Frame = +2 Query: 20 SLSSQAFAGKAVKNLPSSSV----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 187 ++ S AFAG+ V + R +MR+T Q S WYG+DR +LGP Sbjct: 5 AIQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQ----SIWYGADRPKFLGPF 60 Query: 188 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 367 S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++N Sbjct: 61 SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN 120 Query: 368 GVKFGEAVWFKAGS 409 GV+FGEAVWFKAG+ Sbjct: 121 GVQFGEAVWFKAGA 134
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 157 bits (397), Expect = 6e-39 Identities = 72/76 (94%), Positives = 73/76 (96%) Frame = +2 Query: 182 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 361 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 362 RNGVKFGEAVWFKAGS 409 RNGVKFGEAVWFKAGS Sbjct: 61 RNGVKFGEAVWFKAGS 76
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 152 bits (385), Expect = 1e-37 Identities = 85/141 (60%), Positives = 97/141 (68%), Gaps = 5/141 (3%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVT--MRKTAAKAK-QVASGSP-WYGSDRV 169 MAST M+ +S+A K P S G A +R AA ++ G+ WYG DRV Sbjct: 1 MASTIMAAASRAVVAKT----PFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRV 56 Query: 170 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 349 YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFP Sbjct: 57 KYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFP 116 Query: 350 ELLAR-NGVKFGEAVWFKAGS 409 E+L + GV+F E VWFKAGS Sbjct: 117 EVLQKWVGVEFKEPVWFKAGS 137 Score = 30.8 bits (68), Expect = 0.80 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 221 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 370 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 150 bits (378), Expect = 9e-37 Identities = 81/138 (58%), Positives = 89/138 (64%), Gaps = 3/138 (2%) Frame = +2 Query: 5 ASTTMSLSSQAFAGKAVKNLPSSSV--FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 AS+T + + F G+ P V G AR TM S WYG DRV YL Sbjct: 8 ASSTTVVKATPFLGQTKNANPLRDVVAMGSARFTM-----------SNDLWYGPDRVKYL 56 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 GP S + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L Sbjct: 57 GPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVL 116 Query: 359 AR-NGVKFGEAVWFKAGS 409 + V F E VWFKAGS Sbjct: 117 EKWVKVDFKEPVWFKAGS 134 Score = 31.2 bits (69), Expect = 0.61 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 221 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 370 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 149 bits (377), Expect = 1e-36 Identities = 74/108 (68%), Positives = 86/108 (79%), Gaps = 2/108 (1%) Frame = +2 Query: 92 RVTMRKTAAKAKQV-ASGSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSAD 265 + T +KTAAKA +SG +YG +R +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 16 KATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSAD 75 Query: 266 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 409 PETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAG+ Sbjct: 76 PETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGA 123 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +2 Query: 221 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 370 +PG+ +D GL+ DP+TFA+ + E+ + R A G ++ G Sbjct: 177 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKG 225
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 145 bits (367), Expect = 2e-35 Identities = 78/114 (68%), Positives = 85/114 (74%) Frame = +2 Query: 68 SSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 247 SS++ A TM K AAK+K +S RV YLGP SGE PSYLTGEFPGDYGWDT Sbjct: 30 SSTLIVTAGFTMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85 Query: 248 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 409 AGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAG+ Sbjct: 86 AGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGA 139
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 145 bits (365), Expect = 3e-35 Identities = 73/109 (66%), Positives = 83/109 (76%), Gaps = 1/109 (0%) Frame = +2 Query: 86 EARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 265 +A T + AA AK ++G WYG DR +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 20 KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77 Query: 266 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGS 409 PETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAG+ Sbjct: 78 PETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGA 126 Score = 30.8 bits (68), Expect = 0.80 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +2 Query: 221 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 370 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 130 bits (327), Expect = 7e-31 Identities = 61/89 (68%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +2 Query: 149 WYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 325 +YG DR +LGP S + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 326 GALGCVFPELLAR-NGVKFGEAVWFKAGS 409 GALG + PELL++ GV+FGE VWFKAG+ Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGA 121 Score = 30.4 bits (67), Expect = 1.0 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 221 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 370 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 109 bits (273), Expect = 1e-24 Identities = 59/106 (55%), Positives = 73/106 (68%), Gaps = 2/106 (1%) Frame = +2 Query: 98 TMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 277 T + A +K +S + +YG D L + P TGEFPGDYGWDTAGLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 278 AKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGS 409 + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAG+ Sbjct: 99 KRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGA 144 Score = 32.3 bits (72), Expect = 0.28 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +2 Query: 221 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 370 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 96.3 bits (238), Expect = 2e-20 Identities = 59/139 (42%), Positives = 74/139 (53%), Gaps = 10/139 (7%) Frame = +2 Query: 23 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASG------SPWYGSDRVLYL-- 178 L+ +A + + S S F + +K A AK A + WYG DR ++L Sbjct: 14 LNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPD 73 Query: 179 GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 355 G L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE Sbjct: 74 GLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEA 133 Query: 356 LARNGVKFG-EAVWFKAGS 409 L + G G EAVWFK G+ Sbjct: 134 LNKYGANCGPEAVWFKTGA 152
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 82.4 bits (202), Expect = 2e-16 Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 1/136 (0%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEA-RVTMRKTAAKAKQVASGSPWYGSDRVLYL 178 +A+ S S G V +S + G RV+ T A+ + DR L+ Sbjct: 10 IAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWF 69 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 358 PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL Sbjct: 70 P--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127 Query: 359 ARNGVKFGEAVWFKAG 406 + G+ W+ AG Sbjct: 128 TKIGI-LNTPSWYTAG 142
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 75.5 bits (184), Expect = 3e-14 Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 2/114 (1%) Frame = +2 Query: 71 SSVFGEARVTMRKTAAK--AKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 244 +S G R+ + K A ++ VA + DR L+ PP +L G PGD+G+D Sbjct: 32 ASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFD 89 Query: 245 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 406 GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Sbjct: 90 PLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAG 142
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 73.9 bits (180), Expect = 8e-14 Identities = 35/73 (47%), Positives = 47/73 (64%) Frame = +2 Query: 188 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 367 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL--- 249 Query: 368 GVKFGEAVWFKAG 406 G+ WF+AG Sbjct: 250 ----GKGAWFEAG 258 Score = 72.0 bits (175), Expect = 3e-13 Identities = 35/68 (51%), Positives = 43/68 (63%) Frame = +2 Query: 197 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 376 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 377 FGEAVWFK 400 G WF+ Sbjct: 434 -GNGAWFQ 440 Score = 63.9 bits (154), Expect = 9e-11 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +2 Query: 200 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 379 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 380 GEAVWFKA 403 G+ +W++A Sbjct: 65 GKGIWYEA 72
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 66.6 bits (161), Expect = 1e-11 Identities = 30/72 (41%), Positives = 45/72 (62%) Frame = +2 Query: 194 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 373 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221 Query: 374 KFGEAVWFKAGS 409 G+ WF+ G+ Sbjct: 222 --GKGAWFEVGN 231 Score = 37.4 bits (85), Expect = 0.009 Identities = 19/45 (42%), Positives = 25/45 (55%) Frame = +2 Query: 266 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 400 P + + R EV + R AML +GCV+PELL G VWF+ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFE 38
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 65.9 bits (159), Expect = 2e-11 Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 1/51 (1%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 151 MA++TM+LSS FAGKAVK PSSS + G R+TMRKTAAK K +SGSPW Sbjct: 1 MAASTMALSSSTFAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 64.7 bits (156), Expect = 5e-11 Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 1/51 (1%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 151 MA++TM+LSS FAGK VK PSSS + G R+TMRKTAAK K +SGSPW Sbjct: 1 MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 64.7 bits (156), Expect = 5e-11 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Frame = +2 Query: 185 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 361 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL- 108 Query: 362 RNGVKFGEAVWFKA 403 G W KA Sbjct: 109 ------GLGNWVKA 116
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 61.6 bits (148), Expect = 4e-10 Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 9/144 (6%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAK-AKQVASGSPWYGSDRVLYL 178 ++S+++S S++A A + + + S SV +A +R + KQ A+ W+ S + L Sbjct: 7 ISSSSISTSAEA-ARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSL-- 63 Query: 179 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGC 340 SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G Sbjct: 64 --------SYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGA 114 Query: 341 VFPELLARNGVKFGEA--VWFKAG 406 + PE+L + G+ E WF+ G Sbjct: 115 IAPEILGKAGLIPQETALAWFQTG 138
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 59.3 bits (142), Expect = 2e-09 Identities = 28/69 (40%), Positives = 39/69 (56%) Frame = +2 Query: 200 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 379 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122 Query: 380 GEAVWFKAG 406 W+ AG Sbjct: 123 NVPEWYDAG 131
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 57.0 bits (136), Expect = 1e-08 Identities = 39/114 (34%), Positives = 51/114 (44%) Frame = +2 Query: 68 SSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 247 +S V T RK A A W + + G + P +L G PGD+G+D Sbjct: 33 NSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVK----GGGNFLDPEWLDGSLPGDFGFDP 88 Query: 248 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 409 GL DP RE E+IH RWAML LG + A G+ WF+AG+ Sbjct: 89 LGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP-----WFEAGA 135
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 55.8 bits (133), Expect = 2e-08 Identities = 29/70 (41%), Positives = 35/70 (50%) Frame = +2 Query: 200 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 379 P +L G PGDYG+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 380 GEAVWFKAGS 409 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 54.3 bits (129), Expect = 7e-08 Identities = 28/70 (40%), Positives = 35/70 (50%) Frame = +2 Query: 200 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 379 P +L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 380 GEAVWFKAGS 409 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 50.8 bits (120), Expect = 7e-07 Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 151 MA+ TM+LSS +FAG+AVK PS+S + G R+TMRK A AK S SPW Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 47.0 bits (110), Expect = 1e-05 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSV-FGEARVTMRKTAAKAKQVASGSPW 151 MA+ M+LSS +FAG+AVK PS+S G R+TMRK A AK S SPW Sbjct: 1 MAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRK--AVAKSAPSSSPW 49
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 44.7 bits (104), Expect = 5e-05 Identities = 48/175 (27%), Positives = 65/175 (37%), Gaps = 47/175 (26%) Frame = +2 Query: 5 ASTTMSLSSQAFAGKAVKNLPSSSVFGEARV---TMRKTAAKAKQVASGSP-WYGSDRVL 172 A++T + +S + V ++ S+S AR T + + KAK V S P W+ Sbjct: 3 ATSTAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPG---- 58 Query: 173 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN----------- 286 + P YL G GDYG+D GL E AKN Sbjct: 59 ------AKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTE 112 Query: 287 ---------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 388 RE E+IH RWAML LG + E L GV + +A Sbjct: 113 AVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL--TGVTWQDA 165 Score = 33.5 bits (75), Expect = 0.12 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 167 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 337 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 40.8 bits (94), Expect = 8e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 350 ELLARNGVKFGEAVWFKAGS 409 ELL +NGVKFGEAVWFKAG+ Sbjct: 1 ELLVKNGVKFGEAVWFKAGA 20
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 39.7 bits (91), Expect = 0.002 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Frame = +2 Query: 176 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 349 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 350 ELLARN--GVKFGEAVW 394 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 37.0 bits (84), Expect = 0.011 Identities = 41/146 (28%), Positives = 54/146 (36%), Gaps = 43/146 (29%) Frame = +2 Query: 80 FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 259 FG+ + +K+A K V + P + Y G +S P +L G GDYG+D GL Sbjct: 36 FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84 Query: 260 ADPE-----------TFAKN--------------------------------RELEVIHC 310 E AKN RE E+IH Sbjct: 85 KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144 Query: 311 RWAMLGALGCVFPELLARNGVKFGEA 388 RWAML LG + E L GV + +A Sbjct: 145 RWAMLATLGALSVEWL--TGVTWQDA 168 Score = 35.4 bits (80), Expect = 0.033 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 167 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 337 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 36.2 bits (82), Expect = 0.019 Identities = 44/168 (26%), Positives = 58/168 (34%), Gaps = 49/168 (29%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYG------SD 163 MA+TT + +S F + P G RV R + K+ + P D Sbjct: 1 MATTTAAAASGIFGIRIQDPRP-----GTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGD 55 Query: 164 RVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------- 286 R+++ PP +L G GD G+D GL E AKN Sbjct: 56 RLVWFP--GANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGI 113 Query: 287 ------------------------RELEVIHCRWAMLGALGCVFPELL 358 RE E+IH RWAMLG LG + E L Sbjct: 114 IQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161 Score = 30.8 bits (68), Expect = 0.80 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +2 Query: 167 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 334 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 36.2 bits (82), Expect = 0.019 Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 45/108 (41%) Frame = +2 Query: 200 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 286 P +L G PGD G+D GLS E AKN Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 287 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 388 RE E+IH RWAML LG + E A GV + EA Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
>VE2_HPV25 (P36787) Regulatory protein E2| Length = 502 Score = 35.8 bits (81), Expect = 0.025 Identities = 38/123 (30%), Positives = 49/123 (39%) Frame = -3 Query: 392 KQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHR 213 ++P +RR R RRSR+ + S S S RSR + +Q RSR + R Sbjct: 249 RRPSSRTRRQQAQARQRRSRSKSRSRSRSQSRSRIRSRSRSRSRSESQSSKRRSRSRSRR 308 Query: 212 SGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSSLPCRQRL 33 S A RGR G TT R P A + Q+ A SS R R Sbjct: 309 KTS------ATRGRGPGSPTTTTSDRAARSPSTTSSAT-SQRSQRSRSRAGSSRGGRGRG 361 Query: 32 GKR 24 G+R Sbjct: 362 GRR 364 Score = 34.7 bits (78), Expect = 0.055 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = -3 Query: 374 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPN-RSRQGTHRSGSSG 198 SRR ATRGR G GSP S R +R TT + RS++ R+GSS Sbjct: 306 SRRKTSATRGR----------GPGSPTTTTSDRAARSPSTTSSATSQRSQRSRSRAGSSR 355 Query: 197 AHQKAGRGRAHGQSRTTGCRR 135 + G R H S + +R Sbjct: 356 GGRGRGGRRRHRLSESPTSKR 376
>CWC22_DEBHA (Q6BU84) Pre-mRNA-splicing factor CWC22| Length = 637 Score = 35.0 bits (79), Expect = 0.042 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 1/96 (1%) Frame = -3 Query: 395 TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSR-QGT 219 T++ + P RGR + +GS S S+ RS G + + +RSR + Sbjct: 529 TEEMRDVLKNLPPEERGRSRSVSGSSRSGSSSYSRSRSYSRSSGSYSRSRSRSRSRSRSR 588 Query: 218 HRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPP 111 R+GS G R ++ +SR+T R ++ P Sbjct: 589 SRTGSRGRTMSRDRSKSFSRSRSTSRSRGESFSRSP 624
>CDAN1_HUMAN (Q8IWY9) Codanin-1| Length = 1226 Score = 34.7 bits (78), Expect = 0.055 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Frame = -3 Query: 362 GPATRGRRSRALQAWPNGSGSPPARGSWRRSR------GQQTTQQCPNRSRQGTHRSGSS 201 GP T + A A P G PP RS+ Q T + P +R+G R G Sbjct: 68 GPPTPAKTPGASAALPGRPGGPPRGSRGARSQLFPPTEAQSTAAEAP-LARRGGRRRGPG 126 Query: 200 GAHQKAGRGRAHGQS 156 A ++ GRG G S Sbjct: 127 PARERGGRGLEEGVS 141
>YR705_MIMIV (Q5UNW3) Hypothetical protein R705| Length = 313 Score = 34.3 bits (77), Expect = 0.072 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Frame = -3 Query: 374 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNR-----SRQGTHRS 210 SRR R SR+ + +GS S +R S RS G +T+ + S RS Sbjct: 200 SRRRSSNARSTSSRSSGSRSSGSRSSGSRSSGSRSTGSKTSSRSSGSKTSRSSGSSRSRS 259 Query: 209 GSSGAHQKAGRGRAHGQSRTTG 144 GSSG+ K+GR R + +S T+G Sbjct: 260 GSSGS--KSGRSR-NSRSGTSG 278 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/73 (30%), Positives = 29/73 (39%) Frame = -3 Query: 374 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGA 195 SR G + G RS + SGS +R S ++ RSR RSG+SG Sbjct: 222 SRSSGSRSSGSRSTGSKTSSRSSGSKTSRSSGSSRSRSGSSGSKSGRSRNS--RSGTSGR 279 Query: 194 HQKAGRGRAHGQS 156 + G G S Sbjct: 280 SSNSRSGSRSGSS 292
>VE2_HPV09 (P36780) Regulatory protein E2| Length = 461 Score = 33.9 bits (76), Expect = 0.095 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Frame = -3 Query: 377 TSRRF-----GPATRGRRSRALQAWPNGSGSPPA-RGSWRRSRGQQTTQQCPNRSRQGTH 216 +SRR+ P TR +R R + G G R RS+G+ T++ R R+G Sbjct: 240 SSRRYQRKASSPTTRKKRQRQGEGEGEGEGEETNYRRQRSRSKGRTETERGGERRRRGRS 299 Query: 215 RSGSSGAHQKAGRGRAHGQSRTT 147 S S RGR G+ TT Sbjct: 300 SSADSTTPTDRRRGRGGGRGPTT 322
>VE2_HPV05 (P06921) Regulatory protein E2| Length = 514 Score = 33.9 bits (76), Expect = 0.095 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%) Frame = -3 Query: 395 TKQPHRTS---RRFG--PATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRS 231 +KQP +T RR+G P+++ RRS+ Q S S RSR + +Q RS Sbjct: 237 SKQPQQTETRGRRYGRRPSSKSRRSQTQQR-----RSRSRHRSRSRSRSRSKSQTHTTRS 291 Query: 230 RQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 135 + + + R R+ G+S TT CRR Sbjct: 292 TTRSRSTSLTKTRALTSRSRSRGRSPTT-CRR 322 Score = 29.3 bits (64), Expect = 2.3 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Frame = -3 Query: 392 KQPHRTSRRFGPAT-------RGRRSRALQAWPNGS-GSPPARGSWRRSRGQQTTQQCPN 237 + P R SR P+T R +R+RA + G+ GS +RG R RG+ Sbjct: 326 RSPRRRSR--SPSTSSSCTTQRSQRARAESSTTRGARGSRGSRGGSRGGRGR-------- 375 Query: 236 RSRQGTHRSGSSGAHQKAGRGRA 168 R+G S SS AH+++ G A Sbjct: 376 --RRGRSSSSSSPAHKRSRGGSA 396 Score = 28.5 bits (62), Expect = 4.0 Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 18/99 (18%) Frame = -3 Query: 389 QPHRT-SRRFGPATRGRRSRALQAWPNGSGSPPA-------RGSWRRSRGQQTTQQCPNR 234 Q H T S +T ++RAL + G P R RRSR T+ C + Sbjct: 285 QTHTTRSTTRSRSTSLTKTRALTSRSRSRGRSPTTCRRGGGRSPRRRSRSPSTSSSCTTQ 344 Query: 233 SRQ----------GTHRSGSSGAHQKAGRGRAHGQSRTT 147 Q G S S + GRGR G+S ++ Sbjct: 345 RSQRARAESSTTRGARGSRGSRGGSRGGRGRRRGRSSSS 383
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 33.5 bits (75), Expect = 0.12 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 9/63 (14%) Frame = -3 Query: 314 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 162 +GSGS + G S + SRG++ + SR G H SGS S H + G G H Sbjct: 2123 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHS 2182 Query: 161 QSR 153 SR Sbjct: 2183 PSR 2185 Score = 31.6 bits (70), Expect = 0.47 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 314 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 162 +GSGS + G S + SRG++ + S G H SGS S H + G G H Sbjct: 1183 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHS 1242 Query: 161 QSR 153 SR Sbjct: 1243 PSR 1245 Score = 30.4 bits (67), Expect = 1.0 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 314 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 162 +GSGS + G S + SRG++ + SR G H SGS S H + G G Sbjct: 1653 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQS 1712 Query: 161 QSR 153 SR Sbjct: 1713 PSR 1715 Score = 30.4 bits (67), Expect = 1.0 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 10/73 (13%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGT----------HRSGSSGAHQKAGRGRAHG 162 GSGS + G R G + Q P+R R G+ H SGS + G G Sbjct: 1340 GSGSSQSSGYGRHGAG---SGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSG 1396 Query: 161 QSRTTGCRRQPAW 123 QS G +W Sbjct: 1397 QSSGFGHHESSSW 1409 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/64 (29%), Positives = 23/64 (35%) Frame = -3 Query: 314 NGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 135 +GSG P+RG G S G H SGS + G GQS G Sbjct: 2294 SGSGQSPSRGRHGSGSGHS--------SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHE 2345 Query: 134 QPAW 123 +W Sbjct: 2346 SSSW 2349 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/64 (29%), Positives = 23/64 (35%) Frame = -3 Query: 314 NGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 135 +GSG P+RG G S G H SGS + G GQS G Sbjct: 1824 SGSGQSPSRGRHGSGSGHS--------SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHE 1875 Query: 134 QPAW 123 +W Sbjct: 1876 SSSW 1879 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 9/63 (14%) Frame = -3 Query: 314 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 162 +GSGS + G S + SR +Q S G H SGS S H + G G H Sbjct: 716 HGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHS 775 Query: 161 QSR 153 SR Sbjct: 776 PSR 778 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 9/63 (14%) Frame = -3 Query: 314 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 162 +GSGS + G S + SRG++ + S G H SGS S H + G G Sbjct: 2593 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQS 2652 Query: 161 QSR 153 SR Sbjct: 2653 PSR 2655 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Frame = -3 Query: 338 SRALQAWPNGSGSPPARGSWRRSRGQQTT-----QQCPNRSRQGTHRSGSSGAHQKAGRG 174 S A +GSG ++G + GQ +T S G H SGSS + +G Sbjct: 2234 SSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQG 2293 Query: 173 RAHGQSRTTG 144 GQS + G Sbjct: 2294 SGSGQSPSRG 2303 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 7/79 (8%) Frame = -3 Query: 368 RFGPATRGRR-----SRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS 204 R G ++RG R + + +GSGS + G R+ G + P+R R G SGS Sbjct: 2139 RSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSG---SGHSPSRGRHG---SGS 2192 Query: 203 --SGAHQKAGRGRAHGQSR 153 S +H + G G SR Sbjct: 2193 GHSSSHGQHGSGSGRSSSR 2211 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Frame = -3 Query: 338 SRALQAWPNGSGSPPARGSWRRSRGQQTT-----QQCPNRSRQGTHRSGSSGAHQKAGRG 174 S A +GSG ++G + GQ +T S G H SGSS + +G Sbjct: 1764 SSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQG 1823 Query: 173 RAHGQSRTTG 144 GQS + G Sbjct: 1824 SGSGQSPSRG 1833 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 9/66 (13%) Frame = -3 Query: 314 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 162 +GSGS + G S + SRG++ + S G H SGS S H + G G Sbjct: 481 HGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQS 540 Query: 161 QSRTTG 144 S + G Sbjct: 541 PSPSRG 546
>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 304 Score = 33.5 bits (75), Expect = 0.12 Identities = 22/55 (40%), Positives = 28/55 (50%) Frame = -1 Query: 403 GLEPNSLTELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVP 239 GL + + +L V +L E AAER +HG A H AV G G G R +VP Sbjct: 66 GLIADGVCDLGIVGQNELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117
>VE2_BPV4 (P08345) Regulatory protein E2| Length = 334 Score = 33.5 bits (75), Expect = 0.12 Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 9/98 (9%) Frame = -3 Query: 377 TSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSR-QGTHRSGSS 201 +S R G +T G+R G P R S R +RG+Q Q +RSR + RS + Sbjct: 127 SSLRVG-STGGQRGTQTGDHARGRSRPSPRSS-RDARGRQQRAQSSSRSRSRSRSRSPTK 184 Query: 200 GAHQKAGRGRAHGQSRTTGCRRQ--------PAWPLPP 111 G H R R G RR+ P P PP Sbjct: 185 GPHSSGRDTRLPSPGRPPGGRRRGTPERERCPGTPTPP 222
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 33.1 bits (74), Expect = 0.16 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 16/133 (12%) Frame = -3 Query: 389 QPHRTSRRFGPATRGRRSRALQAWPN----GSGSPPARGSWRRSRGQQTTQQCPNRSRQG 222 QPHR + PA S A+ P+ G G+PP +W P+ + QG Sbjct: 301 QPHRGA----PAPEAFGSPAVHLAPDLAFQGDGAPPLDATWPFGAS-------PSHAAQG 349 Query: 221 THRSGSSGAHQKAGRGR---------AHGQSRTTGCRRQPAWPLP---PFCAW*REPHQK 78 H +G +G H GR G S T R + AW +P P C P ++ Sbjct: 350 -HSAGRAGGHLHPTAGRPGFEGNEFAPAGASSLTAPRGREAWLVPVPSPACVSNTHPSRR 408 Query: 77 QTMMASSSLPCRQ 39 A S P RQ Sbjct: 409 SQDPALSP-PIRQ 420
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 33.1 bits (74), Expect = 0.16 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Frame = +2 Query: 5 ASTTMSLSSQAFAGKAVKNLPSSSVFGE--------ARVTMRKTAAKAKQVASGS-PWYG 157 +++ M LS A + P+ VF E A +R T + + S PW+G Sbjct: 72 SNSDMYLSPVAMFRDPFRKEPNKLVFCEVFKYNQKPAETNLRHTCKRIMDMVSNQHPWFG 131 Query: 158 SDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 313 ++ L G P + + FPG G G+ AD A R++ H R Sbjct: 132 MEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 32.7 bits (73), Expect = 0.21 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +2 Query: 83 GEARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 259 G A +R T + + S PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 260 ADPETFAKNRELEVIHCR 313 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad| ubiquitination regulatory factor 1 homolog) (DSmurf) (Lethal with a checkpoint kinase protein) Length = 1061 Score = 32.7 bits (73), Expect = 0.21 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 3/94 (3%) Frame = -3 Query: 383 HRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCP-NRSRQGTHRSG 207 H + PA G SR+ A + P + S RRS QQ + RS +GT G Sbjct: 430 HSPNANSTPAGSGGGSRSYTA------ATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGG 483 Query: 206 SSGAHQKAGRGRAHGQSRTTGCRR--QPAWPLPP 111 +SG G G+ + + + +P LPP Sbjct: 484 TSGGGGGGGSGQRYASAAIAAANQAARPFLDLPP 517
>SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre-mRNA-splicing| factor SRP75) (SRP001LB) Length = 494 Score = 32.7 bits (73), Expect = 0.21 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = -3 Query: 362 GPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 183 G GR+ R ++ P R S+ RSR ++ SR+ RSGSS + Sbjct: 162 GTEVNGRKIRLVEDKPGSR----RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSK 217 Query: 182 GRGRAHGQSRT 150 R R+ SR+ Sbjct: 218 SRSRSRSGSRS 228
>MTC1_COREQ (P42828) Modification methylase CeqI (EC 2.1.1.72)| (Adenine-specific methyltransferase CeqI) (M.CeqI) Length = 517 Score = 32.7 bits (73), Expect = 0.21 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -3 Query: 299 PPARGSWRRSRGQQTTQQCPNRSRQGTHR---SGSSGAHQKAGRGRAHGQS-RTTGCRRQ 132 P RG W R + + P R R+ R G + A + GR HG+S R TG R Q Sbjct: 13 PRGRGRWPRLSRRSGCLEVPGRPRRPFLRPTVPGPTSARPRRGRA-PHGRSTRCTGWRVQ 71 Query: 131 PAWPLPPF 108 ++ PPF Sbjct: 72 LSFSCPPF 79
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 32.3 bits (72), Expect = 0.28 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 9/91 (9%) Frame = -3 Query: 395 TKQPHRTSRRFGPATRG---------RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQC 243 ++ HR SR PA RG RSR+ + G+ P S S + + Sbjct: 426 SRDGHRYSR--SPARRGGYVPRRRSRSRSRSGDRYKRGARGPRHHSS---SHSRSSWSLS 480 Query: 242 PNRSRQGTHRSGSSGAHQKAGRGRAHGQSRT 150 P+RSR T RSGS + R ++H QS++ Sbjct: 481 PSRSRSVT-RSGSRSQSRSRSRSQSHSQSQS 510
>HORN_MOUSE (Q8VHD8) Hornerin| Length = 2496 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1815 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1860 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1467 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1512 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1119 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1164 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 770 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 815 Score = 30.4 bits (67), Expect = 1.0 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 374 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 222 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 2337 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 2396 Query: 221 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 144 H+SGS SG+ Q +G HG S ++G Sbjct: 2397 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 2428 Score = 30.4 bits (67), Expect = 1.0 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 374 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 222 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 2166 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 2225 Query: 221 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 144 H+SGS SG+ Q +G HG S ++G Sbjct: 2226 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 2257 Score = 30.4 bits (67), Expect = 1.0 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 374 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 222 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 1995 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 2054 Query: 221 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 144 H+SGS SG+ Q +G HG S ++G Sbjct: 2055 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 2086 Score = 30.4 bits (67), Expect = 1.0 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 374 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 222 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 1299 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRN 1358 Query: 221 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 144 H+SGS SG+ Q +G HG S ++G Sbjct: 1359 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 1390 Score = 30.4 bits (67), Expect = 1.0 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 374 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 222 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 951 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 1010 Query: 221 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 144 H+SGS SG+ Q +G HG S ++G Sbjct: 1011 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 1042 Score = 30.4 bits (67), Expect = 1.0 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 374 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 222 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 602 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 661 Query: 221 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 144 H+SGS SG+ Q +G HG S ++G Sbjct: 662 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 693 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Frame = -3 Query: 374 SRRFGPATRGRRS--RALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS 201 S R+G A+ G+ S R+ Q+ G +R S +SRG+ T+++ R G+ SS Sbjct: 1271 SGRYG-ASSGQTSGCRSGQSTRYGGQGSGSRNSSTQSRGRSTSRESSTSQRYGSGSGESS 1329 Query: 200 GAHQ-KAGRGRA 168 G Q +G+GR+ Sbjct: 1330 GFSQGGSGQGRS 1341 Score = 28.9 bits (63), Expect = 3.0 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 15/92 (16%) Frame = -3 Query: 374 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 222 SR +RGR S Q +GSG S G R SRG Q S + Sbjct: 1647 SRNSSTQSRGRSTSRESSTSQRCGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 1706 Query: 221 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 144 H+SGS SG+ Q +G HG S ++G Sbjct: 1707 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 1738 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 2334 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2379 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 2163 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2208 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 1992 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2037 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 948 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 993 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 168 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 599 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 644 Score = 28.1 bits (61), Expect = 5.2 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Frame = -3 Query: 383 HRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS 204 H S G G + W +GSGS + G + + Q + +RQG Sbjct: 2250 HGHSSSSGTHNSGSSQSSSTQWSHGSGSEQSSGLGQYG---SPSGQTSSSTRQG------ 2300 Query: 203 SGAHQKAGRGRAHGQS-RTTGC 141 SG Q +G GR S +T+GC Sbjct: 2301 SGQGQASGSGRYGASSGQTSGC 2322 Score = 28.1 bits (61), Expect = 5.2 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 30/120 (25%) Frame = -3 Query: 395 TKQPHRTSRRFGPATRGR---------RSRALQAWPNGSGSPPARGSWRR---------- 273 T + TS+RFG + G + R+ + GS S GS + Sbjct: 1830 TSRESSTSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGSQQHGSCCGQSSGY 1889 Query: 272 -----------SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 126 S GQQ + + S GTH SG S + + G G G+S G P+ Sbjct: 1890 GQNEYGSGHSASSGQQGSHYSQSSS-YGTHNSGGSPSSSQRGHGSRSGRSSGLGQYGSPS 1948 Score = 28.1 bits (61), Expect = 5.2 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Frame = -3 Query: 374 SRRFGPATRGRRSRALQAWPN-----GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRS 210 S R+G A+ G+ S P GSGS R S +SRG+ T+++ R G+ Sbjct: 1619 SGRYG-ASSGQTSGCGSGQPTRYGEQGSGS---RNSSTQSRGRSTSRESSTSQRCGSGSG 1674 Query: 209 GSSGAHQ-KAGRGRA 168 SSG Q +G+GR+ Sbjct: 1675 ESSGFSQGGSGQGRS 1689 Score = 28.1 bits (61), Expect = 5.2 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 30/120 (25%) Frame = -3 Query: 395 TKQPHRTSRRFGPATRGR---------RSRALQAWPNGSGSPPARGSWRR---------- 273 T + TS+RFG + G + R+ + GS S GS + Sbjct: 1482 TSRESSTSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGSQQHGSCCGQSSGY 1541 Query: 272 -----------SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 126 S GQQ + + S GTH SG S + + G G G+S G P+ Sbjct: 1542 GQNEYGSGHSASSGQQGSHYSQSSS-YGTHNSGGSPSSSQRGHGSRSGRSSGLGQYGSPS 1600 Score = 28.1 bits (61), Expect = 5.2 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 30/120 (25%) Frame = -3 Query: 395 TKQPHRTSRRFGPATRGR---------RSRALQAWPNGSGSPPARGSWRR---------- 273 T + TS+RFG + G + R+ + GS S GS + Sbjct: 1134 TSRESSTSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGSQQHGSCCGQSSGY 1193 Query: 272 -----------SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 126 S GQQ + + S GTH SG S + + G G G+S G P+ Sbjct: 1194 GQNEYGSGHSASSGQQGSHYSQSSS-YGTHNSGGSPSSSQRGHGSRSGRSSGLGQYGSPS 1252 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -3 Query: 272 SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 126 S GQQ + + S GTH SG S + + G G G+S G P+ Sbjct: 508 SSGQQGSHYSQSSS-YGTHNSGGSPSSSQRGHGSRSGRSSGLGQYGSPS 555
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 32.0 bits (71), Expect = 0.36 Identities = 23/85 (27%), Positives = 43/85 (50%) Frame = -2 Query: 402 ALNQTASPNFTPFRASNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP*SPG 223 +L + S + P +S+SG + S P Q+Q ++S++ S S+ N + ++ SP Sbjct: 224 SLATSTSTSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPN 276 Query: 222 NSPVR*LGGSPESGPR*STRSEPYH 148 N+ R +GG+ S +T + H Sbjct: 277 NNGARSVGGAATSAATGTTAAAGSH 301
>TTC16_MACFA (Q95LZ5) Tetratricopeptide repeat protein 16 (TPR repeat protein| 16) Length = 872 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/92 (20%), Positives = 42/92 (45%) Frame = -3 Query: 290 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPP 111 R S +++ Q+ +Q ++++ HR SS G+GR ++ T +RQ + + Sbjct: 691 RQSLSKTQATQSQRQNFSKTKAAAHRRNSSKTKATQGQGRRSSKTEATQGQRQSSSEIET 750 Query: 110 FCAW*REPHQKQTMMASSSLPCRQRLGKRATW 15 +EP + +T + P + + + +W Sbjct: 751 SQGPRQEPSKTKTTRSPRQRPRKVKAARGRSW 782
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.0 bits (71), Expect = 0.36 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 20/150 (13%) Frame = +2 Query: 5 ASTTMSLSSQAFAGKAVKNLPSSSVFGE--------ARVTMRKTAAKAKQVASGS-PWYG 157 +++ M LS A + P+ VF E A +R + + + S PW+G Sbjct: 72 SNSDMYLSPVAMFRDPFRKEPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSNQHPWFG 131 Query: 158 SDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRWA--- 319 ++ L G P + + FPG G G+ AD A R++ H C +A Sbjct: 132 MEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLYAGVK 188 Query: 320 MLGALGCVFP-----ELLARNGVKFGEAVW 394 + G V P ++ G++ G+ +W Sbjct: 189 ITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>Y1711_VIBCH (Q9KRD1) UPF0313 protein VC1711| Length = 789 Score = 31.6 bits (70), Expect = 0.47 Identities = 21/84 (25%), Positives = 38/84 (45%) Frame = -3 Query: 380 RTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS 201 R ++ G +++ Q P GS ++ + + G Q+ + NR +QG S + Sbjct: 707 RGNKSGGQGRPNSGNKSNQGKPAGSKPTGSKPTANKPAGNQSARSEQNRGQQGQRGSATG 766 Query: 200 GAHQKAGRGRAHGQSRTTGCRRQP 129 G Q +GR + G + +RQP Sbjct: 767 GKPQGSGRPASRGNT-----QRQP 785
>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog| Length = 630 Score = 31.6 bits (70), Expect = 0.47 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Frame = -3 Query: 386 PHRTSRRFGPATRGRRSRALQAWPNGSG--SPPARGSWRRSRGQQTTQQCP-NRSRQGTH 216 PHR P + + R + P G+ SPPA SWRR+ Q S+ + Sbjct: 114 PHRR-----PLSVDKHGRQADSCPYGTVYLSPPADTSWRRTNSDSALHQSTMTPSQAESF 168 Query: 215 RSGSSGAHQK 186 GS AHQK Sbjct: 169 TGGSQDAHQK 178
>PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 766 Score = 31.6 bits (70), Expect = 0.47 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = -1 Query: 220 LTGQVARGLTRKRAEVEHTVRAVPRAAGGNLLGLCRRFAHGDASLTKNRR*WQVLH 53 L GQV TR+RA + P A GG L LC+ A D + + RR +V+H Sbjct: 75 LGGQV-NASTRERA-TDFFFEVPPNALGGGLERLCQMLAEPDLGIERQRREREVIH 128
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 0.47 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +2 Query: 131 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 307 V+S PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 308 --CRWAMLGALGC---VFP-----ELLARNGVKFGEAVW 394 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 31.2 bits (69), Expect = 0.61 Identities = 33/124 (26%), Positives = 41/124 (33%), Gaps = 27/124 (21%) Frame = -3 Query: 404 RP*TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQ------------ 261 RP T P R SRR GPA + + + P G S P R R G Sbjct: 80 RPGTPAPSRQSRRTGPAEQADHAHSN---PTGGCSDPQRSPRTRQAGYALGEGSAGLGSR 136 Query: 260 ----------QTTQQCPNRSRQGTHRSGSSGAHQKAGRGR-----AHGQSRTTGCRRQPA 126 Q + + P R RSG+ H G G+ G+ G PA Sbjct: 137 GPRPHPAFQVQWSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPA 196 Query: 125 WPLP 114 P P Sbjct: 197 APGP 200
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 31.2 bits (69), Expect = 0.61 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +2 Query: 89 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 265 A +R T K ++ + PW+G ++ L ++G P + FPG G G+ AD Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>PALH_MAGGR (Q52E66) pH-response regulator protein palH/RIM21| Length = 829 Score = 31.2 bits (69), Expect = 0.61 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = -3 Query: 407 IRP*TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQ---CPN 237 + P + P +S++ G ++RG S A + W + + P RG RS + Q + Sbjct: 627 VGPDSDDPSASSQQGGESSRGSESTAAKGWRTLAQTLPFRGGTARSAEDSSDSQSTTSKS 686 Query: 236 RSRQGTHRSGSS 201 RS+ R G S Sbjct: 687 RSKLQVSREGKS 698
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 0.61 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +2 Query: 89 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 265 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 266 PETFAKNRELEVIHCR 313 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 0.61 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +2 Query: 89 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 265 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 266 PETFAKNRELEVIHCR 313 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1| (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) Length = 634 Score = 30.8 bits (68), Expect = 0.80 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%) Frame = -3 Query: 386 PHRTSRRFGPATRGRRSRALQAWPNGSG--SPPARGSWRRSRGQQTTQQCPNRSRQ-GTH 216 PHR P + + R + P G+ SPPA SWRR+ Q Q + Sbjct: 114 PHRR-----PLSVDKHGRQADSCPYGTMYLSPPADTSWRRTNSDSALHQSTMTPTQPESF 168 Query: 215 RSGSSGAHQK 186 SGS HQK Sbjct: 169 SSGSQDVHQK 178
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 30.8 bits (68), Expect = 0.80 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 5/73 (6%) Frame = -3 Query: 359 PATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSG-----A 195 P + GRR RA G G R S R++ ++ +R R H Sbjct: 584 PPSGGRRGRARNNTRGGGGGGGGRNSRRQAASSSSSSSRRSRRRNNRHEDEEDNDPLLRL 643 Query: 194 HQKAGRGRAHGQS 156 Q AG GR G S Sbjct: 644 SQVAGNGRRRGPS 656
>HSP1_ISOMA (P42136) Sperm protamine P1| Length = 66 Score = 30.8 bits (68), Expect = 0.80 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = -3 Query: 293 ARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHG--QSRTTGCRRQ 132 +R +RR RG+++ R R R G S ++ G+GRAH + R +G RR+ Sbjct: 10 SRSRFRRRRGRRS------RVRGRDARQGRSSRRRRRGKGRAHSGKKGRRSGSRRR 59
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 30.8 bits (68), Expect = 0.80 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 12/102 (11%) Frame = -3 Query: 389 QPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSR-------GQQTTQQCPNRS 231 QP R+ P + + + + P+G+ S + ++ + GQQ QQ P+++ Sbjct: 3752 QPQMQGRQAAPGPQQSQPPSSRQTPSGTASRQPQTQQQQQQQQQQQGLGQQAPQQAPSQA 3811 Query: 230 R-----QGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWP 120 R Q T R + A Q AG+ + TT QPA P Sbjct: 3812 RLQPQSQPTTRGTAPAASQPAGKPQ---PGPTTAPGPQPAGP 3850
>VE2_HPV19 (P36786) Regulatory protein E2| Length = 493 Score = 30.8 bits (68), Expect = 0.80 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 1/73 (1%) Frame = -3 Query: 374 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS-G 198 SRR TRGR G GSP A + SR T + +G+ R G S G Sbjct: 293 SRRKASTTRGR----------GRGSPTATSD-QSSRSPSATSSTTSLRSRGSSRVGRSRG 341 Query: 197 AHQKAGRGRAHGQ 159 + GR R G+ Sbjct: 342 GRSRVGRSRGRGK 354
>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4| Length = 489 Score = 30.8 bits (68), Expect = 0.80 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = -3 Query: 362 GPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 183 G GR+ R ++ P R S+ RSR ++ SR+ RSGSS + Sbjct: 162 GTEVNGRKIRLVEDKPGSR----RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSK 217 Query: 182 GRGRAHGQSRT 150 R R+ S + Sbjct: 218 SRSRSRSGSHS 228
>IF2_STIAU (P55875) Translation initiation factor IF-2| Length = 1054 Score = 30.8 bits (68), Expect = 0.80 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = -3 Query: 359 PATRGRRSRALQAWPN-GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 183 P+T GR AWP+ GS A G+ R S G + R R + R+ +A Sbjct: 252 PSTSGR----WHAWPSRGSSGRFAHGAGRPS-GWTFARWTSGRPRAASRRTAVQRPSGRA 306 Query: 182 GRGRAHGQSRTTG 144 G G +HG R G Sbjct: 307 GAGASHGLQRRKG 319
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 0.80 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +2 Query: 89 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 265 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 266 PETFAKNRELEVIHCR 313 A R++ H R Sbjct: 168 R---AYGRDIVEAHYR 180
>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor| 50 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 416 Score = 30.4 bits (67), Expect = 1.0 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -3 Query: 218 HRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA--WPLPPFCAW*REPHQKQTMMASSSLP 48 HRS S H++ R R H ++ RR+P+ W +PP P Q + M AS +P Sbjct: 15 HRSRSRDRHRERSRDRRHHRN----SRRKPSLYWDVPPPGFEHITPMQYKAMQASGQIP 69
>VE2_HPV5B (P26545) Regulatory protein E2| Length = 514 Score = 30.4 bits (67), Expect = 1.0 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = -3 Query: 392 KQPHRTSRR---FGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQG 222 + P R SR + T R RA P G+ +RGS SRG + R+G Sbjct: 326 RSPRRRSRSPSTYSSCTTQRSQRARAESPTTRGARGSRGSRGGSRGGRL-------RRRG 378 Query: 221 THRSGSSGAHQKAGRGRA 168 S SS AH+++ G A Sbjct: 379 RSSSSSSPAHKRSRGGSA 396 Score = 30.4 bits (67), Expect = 1.0 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%) Frame = -3 Query: 395 TKQPHRTS---RRFG--PATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRS 231 +KQP +T RR+G P+++ RRS+ Q S S S RSR + T + + Sbjct: 237 SKQPQQTETRGRRYGRRPSSKSRRSQTQQ---RRSRSRHRSRSRSRSRSKSQTHTTWSTT 293 Query: 230 RQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 135 R + G + A R R+ G+S +T CRR Sbjct: 294 RSRSTSVGKTRA--LTSRSRSRGRSPST-CRR 322
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 30.4 bits (67), Expect = 1.0 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +2 Query: 92 RVTMRKTAAKA-KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 238 R R AAK +Q PW+G ++ L G P + G FPG G Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 30.0 bits (66), Expect = 1.4 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 14/89 (15%) Frame = -3 Query: 362 GPATRGRRSRALQAWPNGSGSPPARGSWRRSR---GQQTTQQCPNRS---RQGTHR---- 213 GP+TRGR+ GS A+ S R S GQ T + P S RQG H Sbjct: 2756 GPSTRGRQ---------GSRHEQAQDSSRHSASQDGQDTIRGHPGSSRGGRQGYHHEHSV 2806 Query: 212 --SGSSGAHQK--AGRGRAHGQSRTTGCR 138 SG SG+H +GR+ +G R Sbjct: 2807 DSSGHSGSHHSHTTSQGRSDASRGQSGSR 2835
>VE2_HPV47 (P22420) Regulatory protein E2| Length = 506 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = -3 Query: 353 TRGR-RSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGR 177 TR R RSR+ + + RGS R R + + RSR+G R G +AG Sbjct: 301 TRARSRSRSTSRSTSTTSRRGGRGSSTRQRSRSPSTYTSKRSREGNTRGRGRGRQGRAGS 360 Query: 176 GRAHGQSR 153 Q R Sbjct: 361 SGGREQRR 368
>G3PA_GUITH (O09452) Glyceraldehyde-3-phosphate dehydrogenase, chloroplast| precursor (EC 1.2.1.59) (NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase) Length = 386 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%) Frame = -1 Query: 403 GLEPNSLTELHAVSGQQLGEDAAERS--KHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVV 230 G+E +T +HA++ Q D++ R + G A + ++ G ++ + V V Sbjct: 215 GIEEGLMTTIHAMTATQAVVDSSSRKDWRGGRAASGN----IIPSSTGAAKAVAKVIPAV 270 Query: 229 ARELTGQVARGLTRKRAEVEHTVRAVPRAAGGNLLGLCRRFAHGD 95 +LTG R T + V+ T R A + +R A+GD Sbjct: 271 KGKLTGMAFRVPTIDVSVVDLTCRLAKDATYEEICAEVKRRANGD 315
>VE2_HPV37 (Q80903) Regulatory protein E2| Length = 454 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/72 (29%), Positives = 31/72 (43%) Frame = -3 Query: 395 TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTH 216 T + + + R G R RR R ++ + S P RG RSRG T+ + Sbjct: 272 TSRGKQATSRGGDRRRRRRER---SYSRDTSSSPDRGRGGRSRGGPETRSQSRSLSRSRS 328 Query: 215 RSGSSGAHQKAG 180 RS S G+ + G Sbjct: 329 RSRSRGSSSRGG 340
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (NY-REN-20 antigen) Length = 482 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -3 Query: 380 RTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTH-RSGS 204 ++SR G + R S++ + + S S RSRG+ + + +RSR+ RS S Sbjct: 398 KSSRHRGKKSHKRTSKSRERHNSRSRGRNRDRSRDRSRGRGSRSRSRSRSRRSRRSRSQS 457 Query: 203 SGAHQKAGRGRAHGQSRT 150 S + GR R+ + RT Sbjct: 458 SSRSRSRGRRRSGNRDRT 475
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +2 Query: 131 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 307 V++ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 308 --CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 394 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 11/83 (13%) Frame = -3 Query: 347 GRRSRALQAWPNGSGSPPARGSWRRS---------RGQQTTQQCPNRSRQGTHRSGSSG- 198 GR R P G G+PP RG S RG + + P + ++G GS G Sbjct: 505 GRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRGN 564 Query: 197 -AHQKAGRGRAHGQSRTTGCRRQ 132 G+ +A G ++ RRQ Sbjct: 565 RGGNVGGKRKADGYNQPDSKRRQ 587
>EPHB3_XENLA (Q91735) Ephrin type-B receptor 3 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor TCK) Length = 974 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = -3 Query: 290 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWP 120 RG+++ +G+ + CP SR S ++ + G RA G+S T C P+ P Sbjct: 268 RGTYKSKQGEGSCMPCPANSR--AISSAATICSCQNGYYRADGESAETACTSVPSAP 322
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 29.6 bits (65), Expect = 1.8 Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 2/121 (1%) Frame = +2 Query: 2 MASTTMSLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLG 181 +AS + ++ QA AGK V S +V G T+ +A++++VA YL Sbjct: 12 VASRSSTVRVQA-AGKTVSG--SKTVSGGK--TVGSASAESRRVAEVQA--------YLA 58 Query: 182 PLSGEPPSYLTGEFPGDYGWDTAGLSADPET--FAKNRELEVIHCRWAMLGALGCVFPEL 355 L G +G F G WD L+A + RE E+ H R AML ALG V E Sbjct: 59 TLPG--CGVESGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQ 114 Query: 356 L 358 L Sbjct: 115 L 115
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 11/99 (11%) Frame = +2 Query: 131 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 307 +A+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 153 IANEYPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 209 Query: 308 --CRWAMLGALGCVFPELLAR--------NGVKFGEAVW 394 C +A + G + A+ G++ G+ +W Sbjct: 210 RACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLW 248
>RS9_HAEIN (P44388) 30S ribosomal protein S9| Length = 129 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/91 (26%), Positives = 35/91 (38%) Frame = -1 Query: 409 GSGLEPNSLTELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVV 230 GSG + EL G++ + D L L + +G G+S Q Sbjct: 23 GSGKITINQRELDVYFGRETARMVVRQPLELVXLTDKLDLYITVKGGGISGQ-------- 74 Query: 229 ARELTGQVARGLTRKRAEVEHTVRAVPRAAG 137 G + G+TR E + T+R RAAG Sbjct: 75 ----AGAIRHGITRALMEYDETLRPALRAAG 101
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 29.3 bits (64), Expect = 2.3 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +2 Query: 89 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 265 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 109 ADTNLRHTCRRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGAD 168 Query: 266 PETFAKNRELEVIHCR 313 A R++ H R Sbjct: 169 K---AYGRDIVEAHYR 181
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 269 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 379 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 269 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 379 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator protein 1| (Cell cycle and apoptosis regulatory protein 1) (CARP-1) Length = 1146 Score = 29.3 bits (64), Expect = 2.3 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 3/93 (3%) Frame = -3 Query: 404 RP*TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQ 225 +P +QP + + P R Q P PP+R S R RG Q + +RSR+ Sbjct: 263 QPLLQQPQQKAGLLQPPVR----IVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRE 318 Query: 224 ---GTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 135 RS +K R R+ + R RR Sbjct: 319 RDRERRRSRERSPQRKRSRERSPRRERERSPRR 351
>GPC4_MOUSE (P51655) Glypican-4 precursor (K-glypican)| Length = 557 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -2 Query: 171 STRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDGKFFTALPAKAWEESDM 16 S R PYH T A ++ R+VT K KF+++LP+ + M Sbjct: 362 SARFRPYHPEQRPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSTVCNDERM 413
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 2.3 Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 24/102 (23%) Frame = -3 Query: 362 GPATRGRRSRALQAWPNGSGSPPARGS--------WRRS---------------RGQQTT 252 G A GRR R GSG PP R WRR RG + Sbjct: 1589 GAAAAGRRDRPGGGGGWGSGPPPCRRCGHRCWLCWWRRGPRPRRRPGLTDRVPPRGGPSP 1648 Query: 251 QQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR-RQP 129 + C R G G G + G G R CR R+P Sbjct: 1649 RGCRGAGRAGGGGRGGCGGGRAPGAAGGPGLCRCECCRGRRP 1690
>SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre-mRNA-splicing| factor SRP55) Length = 344 Score = 29.3 bits (64), Expect = 2.3 Identities = 28/109 (25%), Positives = 44/109 (40%) Frame = -3 Query: 380 RTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS 201 R+ R ++GR+SR+ + S RGS SR + + +RSR + + Sbjct: 229 RSKGRSRSRSKGRKSRS----KSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKEN 284 Query: 200 GAHQKAGRGRAHGQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSS 54 G + R+ QSR+ P+PP A P K+ S S Sbjct: 285 GKGDIKSKSRSRSQSRSNS-----PLPVPPSKARSVSPPPKRATSRSRS 328
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 29.3 bits (64), Expect = 2.3 Identities = 21/49 (42%), Positives = 26/49 (53%) Frame = -2 Query: 231 SPGNSPVR*LGGSPESGPR*STRSEPYHGLPEATCLAFAAVLRMVTRAS 85 SPG P G+P S PR + R+ PY GLP A A R ++RAS Sbjct: 771 SPGPPPPASPPGAPAS-PR-APRTSPYGGLPAAPLAGPALPARRLSRAS 817
>GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 424 Score = 29.3 bits (64), Expect = 2.3 Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +2 Query: 116 AKAKQVASGSP---WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 286 AK QVA G+ W G V G GE G PG YG + SAD T+ KN Sbjct: 103 AKVCQVAQGTGTLLWRG---VSLAGAEFGE------GSLPGTYGSNYIYPSADSATYYKN 153 Query: 287 RELEVIHC--RWAML 325 + + ++ RW L Sbjct: 154 KGMNLVRLPFRWERL 168
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +2 Query: 92 RVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 238 R R AK ++A PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator protein 1| (Cell cycle and apoptosis regulatory protein 1) (CARP-1) (Death inducer with SAP domain) Length = 1150 Score = 29.3 bits (64), Expect = 2.3 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 3/93 (3%) Frame = -3 Query: 404 RP*TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQ 225 +P +QP + + P R Q P PP+R S R RG Q + +RSR+ Sbjct: 266 QPLLQQPQQKAGLLQPPVR----IVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRE 321 Query: 224 ---GTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 135 RS +K R R+ + R RR Sbjct: 322 RERERRRSRERSPQRKRSRERSPRRERERSPRR 354
>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit| (CAB2) (Calcium channel, voltage-dependent, beta 2 subunit) Length = 603 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/53 (26%), Positives = 23/53 (43%) Frame = -3 Query: 290 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQ 132 RG+ RS Q + CP ++ HRS + + ++G R + T Q Sbjct: 451 RGAPGRSASQAEEEHCPEPVKKAQHRSSTQHHNHRSGTSRGLSRQETLDSETQ 503
>EFG1_CANAL (P43064) Enhanced filamentous growth protein| Length = 552 Score = 29.3 bits (64), Expect = 2.3 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%) Frame = -3 Query: 272 SRGQQTTQQCPNR--SRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQP------AWPL 117 S+G Q PN+ Q H +GS+ + A G + T+G +QP A P+ Sbjct: 109 SQGNYYQQTIPNQLSQPQPQHYNGSNRNYTSAPSGAPIPSNSTSGPSQQPPLPGQQAVPI 168 Query: 116 PPFCAW*REPHQKQTMMASSS 54 PP + ++P Q + +SS Sbjct: 169 PPHVSTMQQPTPVQDTLNASS 189
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 305 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 138 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 104 GPPPRRYGSSGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 163 Query: 137 R 135 R Sbjct: 164 R 164 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/74 (32%), Positives = 35/74 (47%) Frame = -3 Query: 371 RRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAH 192 RR+G + GRRSR SP R RRSR + ++ +RSR + S S Sbjct: 108 RRYGSSGYGRRSR----------SPRRR---RRSRSRSRSR---SRSRSRSRYSRSKSRS 151 Query: 191 QKAGRGRAHGQSRT 150 + R R+ +SR+ Sbjct: 152 RTRSRSRSTSKSRS 165
>GLN11_ORYSA (P14656) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2)| (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) Length = 356 Score = 28.9 bits (63), Expect = 3.0 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = +2 Query: 104 RKTAAK---AKQVASGSPWYGSDR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 265 R AAK + +VAS PWYG ++ L P + G FPG G G+ AD Sbjct: 107 RHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGAD 164
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 28.9 bits (63), Expect = 3.0 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -3 Query: 386 PHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSG 207 P TS +G +++ S Q P+ G ++S GQQ + P Q + Sbjct: 106 PSSTSGSYGSSSQS--SSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNS 163 Query: 206 SSGAHQKAGRGRAHGQSRTT 147 SSG G G +GQ +++ Sbjct: 164 SSGGGGGGGGGGNYGQDQSS 183 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/68 (25%), Positives = 32/68 (47%) Frame = -3 Query: 326 QAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTT 147 Q+ P G GS GS + S+ Q Q S +SG++ + + ++GQ ++ Sbjct: 69 QSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSG 128 Query: 146 GCRRQPAW 123 +QP++ Sbjct: 129 SYSQQPSY 136
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 28.9 bits (63), Expect = 3.0 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Frame = -2 Query: 402 ALNQTASPNFTPFRAS---NSGKT-QPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP 235 A++ T +P TP ++ SG + PSAP+M+ + +S+S + S PAVSQ Sbjct: 399 AMSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYPSLPTSLPAVSQ- 457 Query: 234 *SPGNSPVR*LGGSPESGPR 175 G S LG S ES R Sbjct: 458 -GFGQSTTTTLGPSFESNER 476
>ARP8_SCHPO (Q9US07) Probable actin-related protein 8| Length = 620 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -1 Query: 379 ELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVVARELTGQVAR 200 E + +LGE+ K T V H+ L GL ++ P++VP V+AR++ A+ Sbjct: 38 EEDGIEESELGEE-----KDNKTIVLHIGSQNLRIGLASNKTPTTVPMVIARKMRAPFAQ 92
>AROE_HALSA (Q9HS68) Shikimate dehydrogenase (EC 1.1.1.25)| Length = 266 Score = 28.9 bits (63), Expect = 3.0 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 4/102 (3%) Frame = -1 Query: 376 LHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEG-LGVSRQPSSVPTVVARELTGQVAR 200 LHA + + G DA R A D A+ G G LGV+ + P + VA Sbjct: 19 LHAAAYDECGLDA--RYVTFEPAPDDAAAAIRGAGALGVAGLNVTAP--FKQSAASAVAT 74 Query: 199 GLTRKRAEVEHTVR---AVPRAAGGNLLGLCRRFAHGDASLT 83 R +T+ A PR ++ G+ R FAH D SL+ Sbjct: 75 DSMAARVGAVNTIDFSGAAPRGYNTDVAGVKRAFAHHDVSLS 116
>RK22_CHLRE (Q84U21) 50S ribosomal protein L22, chloroplast precursor| Length = 175 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +3 Query: 87 RLASPCAKRRQRPSRLPPAARGTALTVCSTSARFLVSPRA 206 R P RP+R+ P AR TA VCS + +P A Sbjct: 17 RSVQPFRPAAVRPARIAPVARKTATVVCSAATDAPAAPVA 56
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 28.9 bits (63), Expect = 3.0 Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 7/120 (5%) Frame = -3 Query: 374 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQT------TQQCPNRSRQGTHR 213 S++ GP + ++ P GS +P + R Q TQQ P +QG Sbjct: 402 SQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSG 461 Query: 212 SGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLP-PFCAW*REPHQKQTMMASSSLPCRQR 36 G G + H Q + +QP P ++ ++P + + SS P Q+ Sbjct: 462 YGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQ 521
>ADF1_CANAL (P46589) Adherence factor (Adhesion and aggregation mediating| surface antigen) Length = 612 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -3 Query: 260 QTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 126 Q TQ NRSR T S G+ Q +G G R+TG ++Q A Sbjct: 197 QATQPRSNRSRSQTSFSKPRGSRQVSGSG------RSTGAKKQSA 235
>RS9_HAESO (P31782) 30S ribosomal protein S9| Length = 129 Score = 28.9 bits (63), Expect = 3.0 Identities = 25/91 (27%), Positives = 35/91 (38%) Frame = -1 Query: 409 GSGLEPNSLTELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVV 230 GSG + EL G++ + D L L V +G G+S Q Sbjct: 23 GSGKIVINQRELDVYFGRETSRMIVRQPLELVELTDKLDLYVTVKGGGISGQ-------- 74 Query: 229 ARELTGQVARGLTRKRAEVEHTVRAVPRAAG 137 G + G+TR E + T+R RAAG Sbjct: 75 ----AGAIRHGITRALIEYDETLRPALRAAG 101
>RDRP_NODAV (Q9IMM4) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 1043 Score = 28.9 bits (63), Expect = 3.0 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Frame = -3 Query: 350 RGRRSRALQAWPNGSGS----PPA--RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ 189 R + + QA GSG P A RGS +R +G + + P+R+ S AHQ Sbjct: 916 RANQVTSSQAGAAGSGDASNDPNAHDRGS-QRQQGSASVLRVPDRAAPAGVSSDEQPAHQ 974 Query: 188 KAGRGRAH--GQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSS 54 A R A G G RR+P P R+ +Q + + S Sbjct: 975 TASRSSASRGGAGPGRGGRRRPGPPAKTTAGGARDGNQARAPTSGPS 1021
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 28.9 bits (63), Expect = 3.0 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = -2 Query: 405 PALNQTASPNFTPFRASNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP*SP 226 P Q +P +S + + QP+ P A T++ R L + S +N + SP Sbjct: 233 PLPQQPPAPANQDQNSSQNARLQPTPPIQAPAPKPTAAPRPLDRESPGVENKLIPPVGSP 292 Query: 225 GNS-PVR*LGGSPESGP 178 G+S P+ G P S P Sbjct: 293 GSSTPLPPDGTGPNSTP 309
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/70 (27%), Positives = 27/70 (38%) Frame = -3 Query: 347 GRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRA 168 G R A A P G PP ++G + + + G GAH AG Sbjct: 703 GERGEAGPAGPTGFAGPPGAAGHTGAKGDRGAKGPKGEAGS----PGPLGAHGSAGPAGP 758 Query: 167 HGQSRTTGCR 138 +G + +TG R Sbjct: 759 NGPAGSTGAR 768
>PRIO_SAISC (P40258) Major prion protein precursor (PrP) (PrP27-30) (PrP33-35C)| (CD230 antigen) Length = 260 Score = 28.9 bits (63), Expect = 3.0 Identities = 20/71 (28%), Positives = 24/71 (33%) Frame = -3 Query: 326 QAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTT 147 Q P G+ PP G W + G Q P+ G G G G G+ HG Sbjct: 41 QGSPGGNRYPPQGGGWGQPHGGGWGQ--PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQ 98 Query: 146 GCRRQPAWPLP 114 G W P Sbjct: 99 GGGTHNQWNKP 109
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 305 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 138 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 137 R 135 R Sbjct: 163 R 163
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 305 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 138 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 137 R 135 R Sbjct: 163 R 163
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 305 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 138 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 137 R 135 R Sbjct: 163 R 163
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 305 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 138 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 137 R 135 R Sbjct: 163 R 163
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -3 Query: 278 RRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ--KAGRGRAHGQSRTTGCR 138 R+ R Q + NRSR +R GS+G + GRGR G SR G R Sbjct: 75 RQIRVDQAGKSSDNRSRG--YRGGSAGGRGFFRGGRGRGRGFSRGGGDR 121
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -3 Query: 278 RRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ--KAGRGRAHGQSRTTGCR 138 R+ R Q + NRSR +R GS+G + GRGR G SR G R Sbjct: 75 RQIRVDQAGKSSDNRSRG--YRGGSAGGRGFFRGGRGRGRGFSRGGGDR 121
>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22| Length = 881 Score = 28.5 bits (62), Expect = 4.0 Identities = 28/108 (25%), Positives = 42/108 (38%) Frame = -3 Query: 344 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAH 165 RR R+ + S +PP R R+RG++ + Q + R+ RS S R R Sbjct: 766 RRDRSYSRSLSRSVTPPLRAVDARARGRRYSSQSLSPPRRRAERSVSPQRPPPGRRPRGD 825 Query: 164 GQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSSLPCRQRLGKRA 21 SR+ P P + R + AS S P R +R+ Sbjct: 826 SLSRSPS-------PPPRYAREQRRRRNSSSASASRSPPHRDSNRRRS 866
>SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5) (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1078 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -3 Query: 272 SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRA 168 SRG ++ + +RS+ G RSGS ++ RG++ Sbjct: 39 SRGSRSVSRSRSRSQSGHSRSGSESPQRRDNRGKS 73
>GDF7_CERAE (Q9BDW8) Growth/differentiation factor 7 precursor (GDF-7)| Length = 447 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQ 132 G+GSP A + RR R + GT + SG G GR HG+ + C R+ Sbjct: 303 GTGSPRAVTAGRRRR---------RTALAGTRTAQGSGG----GAGRGHGRRGRSRCSRK 349 Query: 131 P 129 P Sbjct: 350 P 350
>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)| Length = 1992 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -3 Query: 308 SGSPPAR-GSWRRSRGQQTTQQCPNRSRQGT 219 S SPPA S RRS Q+TT C + SR+G+ Sbjct: 310 SESPPAELPSLRRSTRQKTTGSCASTSRRGS 340
>TKT1_RHIME (P58333) Transketolase (EC 2.2.1.1) (TK)| Length = 694 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 236 RSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPF 108 R+R G + G+H+ G A G+ R + WP PPF Sbjct: 251 RTRIGKGAASMEGSHKT--HGAALGEKEIAATREKLGWPHPPF 291
>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -3 Query: 344 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 171 RRS +A P+GSG + + +Q QQ +GT G G Q+A G+ Sbjct: 124 RRSATREAGPSGSGERAGTAA-DDTDNRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ 180
>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -3 Query: 344 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 171 RRS +A P+GSG + + +Q QQ +GT G G Q+A G+ Sbjct: 124 RRSATREAGPSGSGERAGTAA-DDTDNRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ 180
>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1| Length = 959 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Frame = -3 Query: 209 GSSGAHQKAGRGRAHGQSRTTGCR-----RQPAWPLPP 111 G GA Q G G A G SR G RQPAW PP Sbjct: 142 GLGGAEQAMGSGHA-GASRRHGIEAGSAWRQPAWQPPP 178
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC| 6.3.1.2) (Glutamate--ammonia ligase 1) Length = 399 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/69 (24%), Positives = 28/69 (40%) Frame = +2 Query: 131 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 310 ++ PW+G ++ L + G P + FP G G+ AD E V+ C Sbjct: 161 ISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVAC 220 Query: 311 RWAMLGALG 337 +A + G Sbjct: 221 LYAGIDFAG 229
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.1 bits (61), Expect = 5.2 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 10/87 (11%) Frame = -3 Query: 392 KQPHRT---SRRFGPATR--GRRSRALQAWPNGSGSPPARGSW--RRSRGQQTTQQCPNR 234 +QPH+ S R P+T G R+ Q S A G W ++ +G+Q Q + Sbjct: 58 QQPHQQQQQSSRQQPSTSSGGSRASGFQQGGQQQKSQDAEG-WTAQKKQGKQQVQGWTKQ 116 Query: 233 SRQGTHR---SGSSGAHQKAGRGRAHG 162 +QG H+ G G +Q+ G+ G Sbjct: 117 GQQGGHQQGRQGQDGGYQQRPPGQQQG 143
>SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein enhancer of| deformed) (52-kDa bracketing protein) (B52 protein) Length = 375 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -3 Query: 311 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQS 156 GSG +R S RSR + + +RSR+ +H S + K+ GR+ +S Sbjct: 201 GSGRGRSRSSSSRSRSRSRRR---SRSRRSSHSRSKSRSRSKSRGGRSKSKS 249
>FOXQ1_RAT (Q63244) Forkhead box protein Q1 (Hepatocyte nuclear factor 3| forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (Fragment) Length = 392 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +3 Query: 27 LPKPLPARQ*RTCHHRLFLVRLASPCAKRRQRPSRLPPAARGTALTVCSTSA 182 L KP +R+ T + L A+PC R P+ LP ++ G L +C+ A Sbjct: 266 LSKPFRSRRDGTXALGVQLPWSAAPCPPLRAYPALLPASSGGALLPLCAYGA 317
>CEAK_ECOLI (Q47502) Colicin-K| Length = 548 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%) Frame = -3 Query: 308 SGSPPARGSWRRSRGQQTTQQCPNR-SRQGTHRSGSSGAHQKAGRGRAHGQSRTT 147 SG P G G QQ N S G H G SG G+G ++ T+ Sbjct: 6 SGYGPTAGESMGGTGANLNQQGGNNNSNSGVHWGGGSGHGNNGGQGNSNSSGSTS 60
>HSP1_PERGU (P42147) Sperm protamine P1| Length = 68 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = -3 Query: 290 RGSWRRSRGQ-QTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHG--QSRTTGCRRQ 132 R S RSR + + ++ +R R R G S ++ G+GRAH + R +G RR+ Sbjct: 4 RNSRSRSRSRFRRRRRGRSRVRGRDARQGRSSRRRRRGKGRAHSGKKGRRSGSRRR 59
>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor| Length = 838 Score = 28.1 bits (61), Expect = 5.2 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Frame = -3 Query: 392 KQPHRTSRRFGPATRGRRSRAL----QAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQ 225 +QP + + PA +G++ + L Q G G PA+G + GQ Q P + +Q Sbjct: 579 QQPAQVQQGQQPA-QGQQGQQLGQGQQGQQPGQGQQPAQGQQGQQPGQGQQGQQPGQGQQ 637 Query: 224 GTHRSG--SSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPF 108 + Q++G+G+ GQ + G +QP P + Sbjct: 638 PGQGQPWYYPTSPQESGQGQQPGQWQQPGQWQQPGQGQPGY 678
>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor| 9G8) Length = 238 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -3 Query: 383 HRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS 204 HR SRR RRSR+ + S S RSRG+++ P RSR + R Sbjct: 120 HRYSRR-------RRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSR 172 Query: 203 SGAHQKAGRGRAHG 162 S + +++ G G Sbjct: 173 SASLRRSRSGSIKG 186
>RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein| Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270) Length = 3224 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = -3 Query: 305 GSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 126 GS + S R T P +S GT ++ + + G AHG G +P Sbjct: 1116 GSSQQKNSGFRRSDDMFTFHGPGKSVFGTPTLETANKNHETDGGSAHGDDDDDGPHFEPV 1175 Query: 125 WPLP 114 PLP Sbjct: 1176 VPLP 1179
>VE2_HPV12 (P36782) Regulatory protein E2| Length = 494 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = -3 Query: 350 RGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 171 R RRSR+ G GS + RR R + ++ RS++G G ++ GRG+ Sbjct: 301 RNRRSRSQSRGRGGRGSSTDTTTKRR-RSRSSSSNTRKRSQRGERGRG-----ERGGRGK 354 Query: 170 AHGQSRTT 147 +S +T Sbjct: 355 RRDRSSST 362
>IF2_ENTFC (P18311) Translation initiation factor IF-2| Length = 784 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -3 Query: 314 NGSGSPPARGSWRRSRGQ--QTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSR 153 NG G+ R +S Q Q + Q N++RQG+++ G+ + RG+ + +R Sbjct: 116 NGGGNNQNRQGATQSGNQNRQGSTQGGNQNRQGSNQGGNQNRNNNNNRGKFNNNNR 171
>PODO_HUMAN (Q9NP85) Podocin| Length = 383 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = -3 Query: 293 ARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAG-RGRAHGQSRTTGCRRQPA 126 AR S R SRG+ R RSG Q+AG G++ T G R PA Sbjct: 5 ARSSSRESRGRGGRTPHKENKRAKAERSGGGRGRQEAGPEPSGSGRAGTPGEPRAPA 61
>LYOX_CHICK (Q05063) Protein-lysine 6-oxidase precursor (EC 1.4.3.13) (Lysyl| oxidase) Length = 420 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 11/75 (14%) Frame = -3 Query: 320 WPNGSGSPPARGSWRR-----SRGQ------QTTQQCPNRSRQGTHRSGSSGAHQKAGRG 174 WP G SPPA +WR+ + GQ Q Q P R RQG SS G G Sbjct: 23 WPAGCQSPPA--AWRQRIQWENNGQVYSLLSQGAQYQPPRRRQGA-EPASSPVLLLRGNG 79 Query: 173 RAHGQSRTTGCRRQP 129 + R QP Sbjct: 80 SVPRAAAAAAARPQP 94
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington| disease gene regulatory region-binding protein 1) (HDBP-1) Length = 387 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 Query: 197 PPSYLTGEFPGDYGWDTAGLSADPET 274 P SY + GD+GWD A + P T Sbjct: 145 PGSYSSSSNSGDWGWDLASDQSSPST 170
>RS9_HAEDU (Q7VLF7) 30S ribosomal protein S9| Length = 131 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = -1 Query: 307 VDHLQLAVLGEGLGVSRQPSSVPTVVARELTGQVARGLTRKRAEVEHTVRAVPRAAG 137 +D L L + +G G+S Q G + G+TR E + T+R RAAG Sbjct: 59 LDKLDLYITVKGGGISGQ------------AGAIRHGITRALMEYDETLRPALRAAG 103
>RK2_PROWI (Q9TJQ5) Plastid 50S ribosomal protein L2| Length = 273 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = -3 Query: 371 RRFGPATRGRRSRALQAWPNGSGSPPARG---SWRRSRGQQTTQQCPNRSRQGTHR 213 R F P T GRR ++ + + S P + W R++G+ + R R G H+ Sbjct: 4 RFFKPTTPGRRHGSVLNFDDLSSKKPEKKLTRGWSRAQGRNNKGRITTRHRGGGHK 59
>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)| (Lymphocyte antigen 64) Length = 573 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -2 Query: 357 SNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP*SPGNS 217 S+SG T P +Q +S + SG A P Q SPG+S Sbjct: 27 SSSGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSS 73
>AMPG_STRLI (Q54340) Aminopeptidase G (EC 3.4.11.-) (Fragment)| Length = 73 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/72 (26%), Positives = 26/72 (36%) Frame = -3 Query: 329 LQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRT 150 L AW N + A WR + G+ + R G R +S + G R R Sbjct: 4 LHAWTNSALVHYAAPDWRETGGRLLGEGALRELRDG--RRAASSSWPGRGSSRRWRPGRR 61 Query: 149 TGCRRQPAWPLP 114 TG + W P Sbjct: 62 TGAAARGCWRAP 73
>ABFB_STRLI (P96463) Alpha-L-arabinofuranosidase precursor (EC 3.2.1.55)| (Arabinosidase) Length = 475 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 185 LSGEPPSYLTGEFPGDYGWDTAGLSADPET 274 L+G PP+ T P Y W + G+ A P++ Sbjct: 166 LTGTPPTDGTCALPSTYRWSSTGVLAQPKS 195
>ABFB_STRCO (O54161) Alpha-L-arabinofuranosidase precursor (EC 3.2.1.55)| (Arabinosidase) Length = 475 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 185 LSGEPPSYLTGEFPGDYGWDTAGLSADPET 274 L+G PP+ T P Y W + G+ A P++ Sbjct: 166 LTGTPPTDGTCALPSTYRWSSTGVLAQPKS 195
>VE2_HPV20 (P50766) Regulatory protein E2| Length = 497 Score = 27.7 bits (60), Expect = 6.8 Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 28/121 (23%) Frame = -3 Query: 392 KQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQG--- 222 ++P +RR + RRSR+ + S S S RSR + ++ RSR G Sbjct: 248 RRPSSRTRRTTQTRQRRRSRSKSKSKSRSRSRSRHRSRSRSRSESPRRRSRYRSRSGSRG 307 Query: 221 --------------THRSG-----------SSGAHQKAGRGRAHGQSRTTGCRRQPAWPL 117 T R+G S + Q G GR + R G R P Sbjct: 308 RVALRAITTTTTTTTRRAGGGSPTSTSSTTSQRSRQLRGGGRGGSRQRARGRRSSSTSPT 367 Query: 116 P 114 P Sbjct: 368 P 368
>TKT2_RHIME (P56900) Transketolase (EC 2.2.1.1) (TK)| Length = 695 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = -3 Query: 236 RSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPF 108 R+R G + G+H+ G A G R + WP PPF Sbjct: 251 RTRIGKGAASMEGSHKT--HGAALGDKEIAATREKLGWPHPPF 291
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = -3 Query: 395 TKQPHRTSRRFGPATRGR-RSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGT 219 T+ P RR P R RSR+ P GSP R S RS + P+RSR + Sbjct: 141 TRSPPSRDRRDSPDRRDNSRSRSRSPPPREDGSPKERRSRSRS-----ASRSPSRSRSNS 195
>DHB_CRAPL (P22239) Desiccation-related protein clone PCC6-19 (CDET6-19)| Length = 155 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/75 (29%), Positives = 27/75 (36%) Frame = -3 Query: 368 RFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ 189 +FG G R P G+ RG GQQ Q G G++G H Sbjct: 3 QFGGEKYGGRHTDEYGNPIQQGAGAHRGGGIMGGGQQAGQH----GTTGVLGHGTAGQHG 58 Query: 188 KAGRGRAHGQSRTTG 144 G G HG + T G Sbjct: 59 TTGGGLGHGTAGTGG 73
>MUC1_MOUSE (Q02496) Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT)| (Episialin) Length = 630 Score = 27.7 bits (60), Expect = 6.8 Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 1/127 (0%) Frame = -2 Query: 402 ALNQTASPNFTPFRASNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP*SPG 223 A T+SP +P + SNS S S A S+ V G +PA S P Sbjct: 109 AHGDTSSPATSPLKDSNSSPVVHSGTSSAATTAPVDSTS-SPVVHGGTSSPATSPPGDST 167 Query: 222 NSPVR*LGGSPES-GPR*STRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDGKFFTAL 46 +SP SP + P ST + G A + + +SP DD T+ Sbjct: 168 SSPDHSSTSSPATRAPEDSTSTAVLSGTSSP-----ATTAPVDSTSSPVAHDD----TSS 218 Query: 45 PAKAWEE 25 PA + E Sbjct: 219 PATSLSE 225
>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)| Length = 335 Score = 27.7 bits (60), Expect = 6.8 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 14/86 (16%) Frame = +2 Query: 143 SPWYGSDRVLYLGPLSGEPPSYLTGEFP----------GDYGWDTAGLSADPETFAKNRE 292 SP+YG VLY G S L EFP G G + S D F+ +R Sbjct: 55 SPYYGPSEVLY-----GRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHRS 109 Query: 293 LEVIHCRWAMLGALGCV----FPELL 358 E +H + L L V FP++L Sbjct: 110 CERLHTTYLDLVYLHDVEFVKFPDIL 135
>GLNA2_DROME (P20478) Glutamine synthetase 2, cytoplasmic (EC 6.3.1.2)| (Glutamate--ammonia ligase 2) Length = 369 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +2 Query: 104 RKTAAK-AKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 265 RKT + A + A+ PW+G ++ G P + FPG G G+ A+ Sbjct: 120 RKTCLEVANKCAAEEPWFGIEQEYTFLDFDGHPLGWPKNGFPGPQGPYYCGVGAN 174
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Frame = -3 Query: 362 GPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 183 G GRR L +GSP AR +R RG H ++GA Q + Sbjct: 591 GRGRGGRRGSGLSGTREDAGSPSARRGEQRRRG---------------HGPPAAGAAQVS 635 Query: 182 GRG-RAHGQ 159 RG RA GQ Sbjct: 636 TRGRRARGQ 644 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 3/87 (3%) Frame = -3 Query: 377 TSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSG 198 T+ AT G A + P G RG R R Q + P R R+G ++G G Sbjct: 455 TTATSASATGGPAEEAGASAPEGQAGGGPRGRARGPRQQARRRHGPQR-RRGPPQAGEEG 513 Query: 197 ---AHQKAGRGRAHGQSRTTGCRRQPA 126 A G G G+ R + PA Sbjct: 514 PGDATLVLGLGTTSGEQRADQSQTLPA 540
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 27.7 bits (60), Expect = 6.8 Identities = 26/106 (24%), Positives = 46/106 (43%) Frame = -3 Query: 371 RRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAH 192 +R PA + RRS ++ + + GSPP+R + Q + P+ + +H S S Sbjct: 636 QRSSPAAK-RRSPSISS-KHRKGSPPSRSNRETRSPPQNKRDSPSPRPRASHTSSSPPPL 693 Query: 191 QKAGRGRAHGQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSS 54 ++ G S + R+ P+ P R P K+T ++ S Sbjct: 694 RR-------GASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPS 732
>SFRS7_MOUSE (Q8BL97) Splicing factor, arginine/serine-rich 7| Length = 267 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -3 Query: 383 HRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS 204 HR SRR RRSR+ + S S RSRG+++ P RSR + R Sbjct: 149 HRYSRR-------RRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVSLRRSR 201 Query: 203 SGAHQKAGRGRAHG 162 S + +++ G G Sbjct: 202 SASLRRSRSGSIIG 215
>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)| Length = 717 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -2 Query: 390 TASPNFTPFRASNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAD 256 +ASP+++P +S + S+ S +Q + TSSS K S D Sbjct: 490 SASPSYSPLSVDSSNVSSSSSSSSSQSSFTTSSSNKGRKRSSLKD 534
>GPC4_HUMAN (O75487) Glypican-4 precursor (K-glypican)| Length = 556 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = -2 Query: 171 STRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDGKFFTALPAKAWEESDM 16 S R P+H T A ++ R+VT K KF+++LP+ + M Sbjct: 362 SARFRPHHPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSNVCNDERM 413
>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC| 3.4.21.97); Capsid assembly protein; Gene UL80 protein; Gene UL80.5 protein; C-terminal peptide] Length = 708 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/57 (31%), Positives = 22/57 (38%) Frame = -3 Query: 317 PNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTT 147 P G PP+ W R G Q Q HR G SG H K + A S ++ Sbjct: 475 PGGMDEPPS--GWERYDGGHRGQS------QKQHRHGGSGGHNKRRKETAAASSSSS 523
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 10/80 (12%) Frame = +2 Query: 170 LYLGPLSGEPPSYLTGE----FPGDYGWDTA-GLSADPETFA-KNRELEVIHCR---WAM 322 +Y G + P + + E P G+D A G+ +D + KN L + C+ W Sbjct: 55 VYYGQRAQRPGTMIITEGTFISPQAGGYDNAPGIWSDEQVAEWKNIFLAIHDCQSFAWVQ 114 Query: 323 LGALGCV-FPELLARNGVKF 379 L +LG FP++LAR+G+++ Sbjct: 115 LWSLGWASFPDVLARDGLRY 134
>GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 358 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 146 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 238 PW+G ++ L L G P + G FPG G Sbjct: 128 PWFGLEQEYTLFDLYGNPYGWPKGGFPGPQG 158
>5HT3R_MOUSE (P23979) 5-hydroxytryptamine 3 receptor precursor (5-HT-3)| (Serotonin-gated ion channel receptor) (5-HT3R) Length = 487 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 244 HCWVVC*PRDLRQEPRAGGDPLP 312 HC V P+DL + PR G PLP Sbjct: 393 HCSHVGGPQDLEKTPRGRGSPLP 415
>NPCL1_HUMAN (Q9UHC9) Niemann-Pick C1-like protein 1 precursor| Length = 1359 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 14 TMSLSSQAFAGKAVKNLPSSSVFGEARVTM 103 T+S+ S FAG A+ NLP V G A+ + Sbjct: 1232 TISMGSAVFAGVAMTNLPGILVLGLAKAQL 1261
>RS9_VIBCH (Q9KUF0) 30S ribosomal protein S9| Length = 130 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/79 (30%), Positives = 34/79 (43%) Frame = -1 Query: 307 VDHLQLAVLGEGLGVSRQPSSVPTVVARELTGQVARGLTRKRAEVEHTVRAVPRAAGGNL 128 V+ L L + +G G+S Q G + G+TR E + ++R V RAA G + Sbjct: 58 VEKLDLYITVKGGGISGQ------------AGAIRHGITRALMEYDESLRPVLRAA-GYV 104 Query: 127 LGLCRRFAHGDASLTKNRR 71 RR L K RR Sbjct: 105 TRDARRVERKKVGLRKARR 123
>ECHA_RAT (Q64428) Trifunctional enzyme alpha subunit, mitochondrial| precursor (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211)] Length = 763 Score = 24.3 bits (51), Expect(2) = 8.2 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = -1 Query: 379 ELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGL-GVSRQPSSVPTVVARELTGQVA 203 E A+ G G+ +++K G QLA+LG GL G SV + L Sbjct: 335 ESKALMGLYNGQVLCKKNKFGAPQKTVQQLAILGAGLMGAGIAQVSVDKGLKTLLKDTTV 394 Query: 202 RGLTRKRAEV 173 GL R + +V Sbjct: 395 TGLGRGQQQV 404 Score = 21.6 bits (44), Expect(2) = 8.2 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = -2 Query: 48 LPAKAWEESDMVVEAI 1 L K +E++DMV+EA+ Sbjct: 433 LDYKGFEKADMVIEAV 448
>CADN2_DROME (Q9VJB6) Putative neural-cadherin 2 precursor (Cadherin-N2 protein)| (DN2-cadherin) Length = 2215 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -3 Query: 287 GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 183 G W R ++ Q+CPN SR+ G+S Q + Sbjct: 2142 GIWCPKRAAKSRQRCPNGSRRKEATLGASSERQSS 2176
>MSX1_CHICK (P28361) Homeobox protein MSX-1 (Msh homeobox 1-like protein)| (CHOX-7) Length = 249 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/80 (28%), Positives = 32/80 (40%) Frame = -3 Query: 350 RGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 171 R RRSR +A P+ S P RRS T P+R R A +A + R Sbjct: 33 RQRRSRGFRA-PSRRPSQP-----RRSDDGGTDVAAPSRRPLPVRRGAGQAARGRAAQSR 86 Query: 170 AHGQSRTTGCRRQPAWPLPP 111 ++ T + P + PP Sbjct: 87 EPREAGATPWMQSPRFSPPP 106
>CCNL1_CHICK (Q5ZJP9) Cyclin-L1| Length = 534 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Frame = -3 Query: 356 ATRGRRSRALQAWPNGSGSPP---ARGSWRRSRG---QQTTQQCPNRSRQGTHRSGSSGA 195 A + + +A A GS SP +G RSR Q+ + P+RS HR S + Sbjct: 364 AMKNAKRKAEGAKRTGSNSPVNGVQKGRESRSRSGSRDQSYSRSPSRSASPKHRKSESYS 423 Query: 194 HQKAGRGRAHGQSRTTGCRRQ 132 + + +SR+ RQ Sbjct: 424 TSSGSKSHSRSRSRSGSPPRQ 444
>Y4QD_RHISN (P55625) Hypothetical 26.8 kDa protein y4qD| Length = 244 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = -1 Query: 235 VVARELTGQVARGLTRKRAEVEHTVRAVPRAAGGNLL--GLCRRFAHGDASL 86 V+ARE G++A L + +E +RA+PR G L+ AH D + Sbjct: 55 VLARETLGEIAGDLGGELNGMELCLRALPRPNAGRLVDAATANEIAHVDGDV 106
>TPIS_LEIXX (Q6AF43) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 259 Score = 27.3 bits (59), Expect = 8.9 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Frame = -1 Query: 352 LGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVVARELTGQVARG--LTRKRA 179 +GE A + KHG +AV QL G+ S+ VVA E + G T ++A Sbjct: 134 VGETAEDLEKHGASAVPVAQLRAALAGI-----DSAADFVVAYEPVWAIGSGQAATPEQA 188 Query: 178 E-VEHTVRAVPRAAGGNLLGLCRRFAHGDASLTKN 77 E V +RAV A G+ + R +G + + N Sbjct: 189 EQVAAALRAVIAEALGDEVAAKTRILYGGSVKSGN 223
>YQP4_CAEEL (Q09531) Hypothetical protein F07F6.4 in chromosome III| Length = 529 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/74 (25%), Positives = 35/74 (47%) Frame = -2 Query: 291 SRFLAKVSGSADNPAVSQP*SPGNSPVR*LGGSPESGPR*STRSEPYHGLPEATCLAFAA 112 SR+ A S S+ + A + + G SP+ + + G + S+ Y G PE C +A Sbjct: 399 SRYTASSSSSSTSRAPTTRLTAGASPISDVDLQKKFGNAKAISSDMYFGTPEMDCETRSA 458 Query: 111 VLRMVTRASPKTDD 70 + + + S ++D Sbjct: 459 LTKCEGQTSFGSED 472
>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/72 (25%), Positives = 36/72 (50%) Frame = -3 Query: 371 RRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAH 192 R + + RSR+ + S +PP R + + RG+Q + +RSR ++ + Sbjct: 725 RSYSRSVSRSRSRSYSRSVSRSPTPPRRQAPAQQRGRQRSYTPSDRSRSRSY------SR 778 Query: 191 QKAGRGRAHGQS 156 ++ RGR++ +S Sbjct: 779 SRSPRGRSYTRS 790
>UST_HUMAN (Q9Y2C2) Uronyl 2-sulfotransferase (EC 2.8.2.-)| Length = 406 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 3/19 (15%) Frame = -3 Query: 320 WPNGS---GSPPARGSWRR 273 WP+G+ G+PP GSW+R Sbjct: 15 WPHGAPMGGAPPGLGSWKR 33
>RNF26_HUMAN (Q9BY78) RING finger protein 26| Length = 433 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 6/81 (7%) Frame = -3 Query: 341 RSRALQAWPNGSGSP------PARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAG 180 RS L +WPN G+P P R R+R Q T + RS + + G Sbjct: 293 RSLQLASWPNRGGAPGAPQGDPMRVFSVRTRRQDTLPEAGRRSEAEEEEARTIRVTPVRG 352 Query: 179 RGRAHGQSRTTGCRRQPAWPL 117 R R + + G Q W L Sbjct: 353 RERLNEEEPPGG---QDPWKL 370
>VPS25_RAT (P0C0A1) Vacuolar protein sorting protein 25 (ELL-associated| protein of 20 kDa) Length = 176 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -2 Query: 168 TRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDG---KFF 55 T E +HGL EAT L L+ +A T DG KFF Sbjct: 136 TEEEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF 176
>VPS25_MOUSE (Q9CQ80) Vacuolar protein sorting protein 25| Length = 176 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -2 Query: 168 TRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDG---KFF 55 T E +HGL EAT L L+ +A T DG KFF Sbjct: 136 TEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF 176
>VPS25_HUMAN (Q9BRG1) Vacuolar protein sorting protein 25 (hVps25)| (ELL-associated protein of 20 kDa) (Dermal papilla-derived protein 9) Length = 176 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -2 Query: 168 TRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDG---KFF 55 T E +HGL EAT L L+ +A T DG KFF Sbjct: 136 TEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF 176
>VPS25_BOVIN (Q5E9A6) Vacuolar protein sorting protein 25| Length = 176 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -2 Query: 168 TRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDG---KFF 55 T E +HGL EAT L L+ +A T DG KFF Sbjct: 136 TEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF 176
>VE2_BPV3 (Q8BDD6) Regulatory protein E2| Length = 414 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 8/67 (11%) Frame = -3 Query: 302 SPPARGSW----RRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAH----GQSRTT 147 SPP S R RG QT P RS SSG+ + RGR+ +SR+ Sbjct: 196 SPPVTSSLPPGPNRRRGPQTRGH-PRHKSASFRRSASSGSDTRDSRGRSRSPSSSRSRSR 254 Query: 146 GCRRQPA 126 R P+ Sbjct: 255 SRSRSPS 261
>TRSF_DROVI (Q24761) Female-specific protein transformer| Length = 199 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/76 (27%), Positives = 32/76 (42%) Frame = -3 Query: 377 TSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSG 198 T +R R RRSR + P + +R + + + SRQ T+ S S Sbjct: 45 TQKRTPTPPRERRSRHERPRSRSRTHSPEQSRCQRRLSRSYVRH-RSGSRQKTYSSSCSR 103 Query: 197 AHQKAGRGRAHGQSRT 150 + R R+ G+SRT Sbjct: 104 RRRSRSRSRSRGRSRT 119
>RENT1_ARATH (Q9FJR0) Regulator of nonsense transcripts 1 homolog (EC 3.6.1.-)| (ATP-dependent helicase UPF1) Length = 1254 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = -3 Query: 311 GSGSPPA--RGSWRRSRGQQTTQQCPNRSRQGTHRSG 207 GSG+P A RGS R+ G PN +R G H +G Sbjct: 960 GSGNPNADRRGSRGRAGGSYLPSGPPNGARPGLHPAG 996
>GLNA_SUIBO (Q8J1R3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Frame = +2 Query: 92 RVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 238 R R K +A S PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTKKVMDLAKDSVPWFGLEQEYTLFDADGTPFGWPKGGFPGPQG 154
>BOWEL_DROME (Q9VQU9) Protein bowel (Brother of odd with entrails limited)| Length = 744 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Frame = +2 Query: 95 VTMRKTAAKAKQVASG-----SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 238 + +R+ AA A + G P VLY GP PP YLTG P G Sbjct: 141 LALREAAAAAAMLGRGPGGPGGPGVPPPGVLY-GPAGVPPPPYLTGPGPSPTG 192
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 27.3 bits (59), Expect = 8.9 Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Frame = -3 Query: 386 PHRTSRRFGPATRGRRSRALQAW-PNGSGSPPARGSWRRSRGQQTTQ--QCPNRSR---Q 225 P R GP + R+ AW P P RG +++Q CP SR + Sbjct: 126 PSTALRPAGPG----QGRSSPAWEPRSPRCPSGPEPPEDPRGARSSQGAACPLMSRPEGK 181 Query: 224 GTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWP 120 G++GAH+ RG + + C AWP Sbjct: 182 AGDGCGTAGAHKGPPRGLSPSRQPLPLCPGAHAWP 216
>MIAA_PROMM (Q7TV75) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 299 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/47 (38%), Positives = 21/47 (44%) Frame = +3 Query: 12 PPCRSLPKPLPARQ*RTCHHRLFLVRLASPCAKRRQRPSRLPPAARG 152 PP L K L RTCHH L++ A P A R P+ RG Sbjct: 121 PPQPELRKQLGELGQRTCHH---LLQAADPTAANRISPADAMRTQRG 164
>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking| protein) (P41) Length = 369 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +2 Query: 227 GDYGWDTAGLSADPETFAKNRELEVI 304 G YG D A ++ D +FAK+R ++V+ Sbjct: 234 GKYGADPASVAFDAISFAKSRNIDVV 259
>ZN759_MOUSE (Q80VM4) Zinc finger protein 579| Length = 562 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = -3 Query: 242 PNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLP-PFC 105 P QG+ G + GRGR G+ R G P PLP P C Sbjct: 5 PPPPAQGSPPHRDRGRGRGRGRGRGRGRGRGRGGAGAPRAPLPCPTC 51
>SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30| Length = 782 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Frame = +3 Query: 6 PQPPCRSLPKPLPARQ*RTC--HHRLFLVRLASPCAKRRQRPSRLPPAARGTALTVCSTS 179 P PP R P+P P R R + + A+R Q PS AA + C + Sbjct: 12 PPPPPRQPPRPTPPRPLRPAPPAQPVEAATFRAAAAERSQSPSAQATAAMAAVASSCGEA 71 Query: 180 A 182 A Sbjct: 72 A 72
>YLL2_EBVP3 (P68346) Hypothetical protein BLLF2| Length = 148 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 102 CAKRRQRPSRLPPAARGTALTVCSTSAR-FLVSPRAT*P 215 C RQRP++ PPA R TV R L+SP+A P Sbjct: 2 CPPVRQRPAQAPPAKRQALETVPHPQNRGRLMSPKARPP 40
>YLL2_EBVA8 (P68345) Hypothetical protein BLLF2| Length = 148 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 102 CAKRRQRPSRLPPAARGTALTVCSTSAR-FLVSPRAT*P 215 C RQRP++ PPA R TV R L+SP+A P Sbjct: 2 CPPVRQRPAQAPPAKRQALETVPHPQNRGRLMSPKARPP 40
>FIBA_BOVIN (P02672) Fibrinogen alpha chain precursor [Contains: Fibrinopeptide| A] Length = 615 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/66 (27%), Positives = 23/66 (34%) Frame = -3 Query: 320 WPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGC 141 W G P + G+W R P GT +GSSG+ HG R + Sbjct: 352 WNPGRPEPGSAGTWNPGR--------PEPGSAGTWNTGSSGSSSFRPDSSGHGNIRPS-- 401 Query: 140 RRQPAW 123 P W Sbjct: 402 --SPDW 405
>RS9_PASMU (Q9CNB1) 30S ribosomal protein S9| Length = 130 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/91 (25%), Positives = 37/91 (40%) Frame = -1 Query: 409 GSGLEPNSLTELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVV 230 GSG + +L G++ + + L L V +G G+S Q Sbjct: 24 GSGKITINQRDLDVYFGRETARMIVRQPLELVEMTEKLDLYVTVKGGGISGQ-------- 75 Query: 229 ARELTGQVARGLTRKRAEVEHTVRAVPRAAG 137 G + G+TR E + ++R+V RAAG Sbjct: 76 ----AGAIRHGITRALIEYDESLRSVLRAAG 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,896,578 Number of Sequences: 219361 Number of extensions: 1562509 Number of successful extensions: 6442 Number of sequences better than 10.0: 236 Number of HSP's better than 10.0 without gapping: 5837 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6357 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
