>ref|NM_195360.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0003P07.17), mRNA
          Length = 3513

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 360 ccaccacagcttgcttcaggccggccactgctatggtccgttggatcctgtcaacaatat 419
           ||||| |||| ||||  |||| |||||||||||||| ||||| || ||||||  ||| ||
Sbjct: 891 ccaccgcagcctgctcgaggctggccactgctatggcccgttcgaccctgtctccaacat 950

                                 
Query: 420 catcgtcaataccatctggtat 441
           |||| |||| ||||||||||||
Sbjct: 951 catcatcaacaccatctggtat 972

>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07,
              complete sequence
          Length = 175116

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                          
Query: 360    ccaccacagcttgcttcaggccggccactgctatggtccgttggatcctgtcaacaatat 419
              ||||| |||| ||||  |||| |||||||||||||| ||||| || ||||||  ||| ||
Sbjct: 106836 ccaccgcagcctgctcgaggctggccactgctatggcccgttcgaccctgtctccaacat 106777

                                    
Query: 420    catcgtcaataccatctggtat 441
              |||| |||| ||||||||||||
Sbjct: 106776 catcatcaacaccatctggtat 106755

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                           
Query: 360     ccaccacagcttgcttcaggccggccactgctatggtccgttggatcctgtcaacaatat 419
               ||||| |||| ||||  |||| |||||||||||||| ||||| || ||||||  ||| ||
Sbjct: 6388806 ccaccgcagcctgctcgaggctggccactgctatggcccgttcgaccctgtctccaacat 6388747

                                     
Query: 420     catcgtcaataccatctggtat 441
               |||| |||| ||||||||||||
Sbjct: 6388746 catcatcaacaccatctggtat 6388725

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                           
Query: 360     ccaccacagcttgcttcaggccggccactgctatggtccgttggatcctgtcaacaatat 419
               ||||| |||| ||||  |||| |||||||||||||| ||||| || ||||||  ||| ||
Sbjct: 6390792 ccaccgcagcctgctcgaggctggccactgctatggcccgttcgaccctgtctccaacat 6390733

                                     
Query: 420     catcgtcaataccatctggtat 441
               |||| |||| ||||||||||||
Sbjct: 6390732 catcatcaacaccatctggtat 6390711

>ref|XM_469410.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1710

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 377 aggccggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatct 436
           |||||||||||||||| || ||| |||| || |||  ||| ||||||||||| |||||||
Sbjct: 578 aggccggccactgctacggcccgctggaccccgtctccaacatcatcgtcaacaccatct 637

               
Query: 437 ggta 440
           ||||
Sbjct: 638 ggta 641

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 377   aggccggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatct 436
             |||||||||||||||| || ||| |||| || |||  ||| ||||||||||| |||||||
Sbjct: 50060 aggccggccactgctacggcccgctggaccccgtctccaacatcatcgtcaacaccatct 50001

                 
Query: 437   ggta 440
             ||||
Sbjct: 50000 ggta 49997

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 377      aggccggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatct 436
                |||||||||||||||| || ||| |||| || |||  ||| ||||||||||| |||||||
Sbjct: 27805930 aggccggccactgctacggcccgctggaccccgtctccaacatcatcgtcaacaccatct 27805871

                    
Query: 437      ggta 440
                ||||
Sbjct: 27805870 ggta 27805867

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 377      aggccggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatct 436
                |||||||||||||||| || ||| |||| || |||  ||| ||||||||||| |||||||
Sbjct: 27897254 aggccggccactgctacggcccgctggaccccgtctccaacatcatcgtcaacaccatct 27897195

                    
Query: 437      ggta 440
                ||||
Sbjct: 27897194 ggta 27897191

>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence,
            complete sequence
          Length = 119329

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                        
Query: 377  aggccggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatct 436
            |||||||||||||||| || ||| |||| || |||  ||| ||||||||||| |||||||
Sbjct: 7963 aggccggccactgctacggcccgctggaccccgtctccaacatcatcgtcaacaccatct 8022

                
Query: 437  ggta 440
            ||||
Sbjct: 8023 ggta 8026

>ref|XM_632858.1| Dictyostelium discoideum hypothetical protein (DDB0218765), partial
           mRNA
          Length = 2754

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 412 aacaatatcatcgtcaataccat 434
           |||||||||||||||||||||||
Sbjct: 873 aacaatatcatcgtcaataccat 851

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                          
Query: 382     ggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatctggta 440
               ||||||||||| |||||  |||| ||||||  ||| ||||| ||||| |||||||||||
Sbjct: 5271812 ggccactgctacggtccactggaccctgtctccaacatcattgtcaacaccatctggta 5271754

>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0417F02
          Length = 150660

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 382  ggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatctggta 440
            ||||||||||| |||||  |||| ||||||  ||| ||||| ||||| |||||||||||
Sbjct: 6176 ggccactgctacggtccactggaccctgtctccaacatcattgtcaacaccatctggta 6118

>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0589E08
          Length = 138416

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 382   ggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatctggta 440
             ||||||||||| |||||  |||| ||||||  ||| ||||| ||||| |||||||||||
Sbjct: 70575 ggccactgctacggtccactggaccctgtctccaacatcattgtcaacaccatctggta 70517

>ref|XM_957112.1| Neurospora crassa OR74A GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-3
           SUBUNIT (GP3-ALPHA) (NCU05206.1) partial mRNA
          Length = 1071

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 34  tttctcaacaaggtcgacatc 54
           |||||||||||||||||||||
Sbjct: 811 tttctcaacaaggtcgacatc 831

>ref|XM_324562.1| Neurospora crassa OR74A GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-3
           SUBUNIT (GP3-ALPHA) (NCU05206.1) partial mRNA
          Length = 1071

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 34  tttctcaacaaggtcgacatc 54
           |||||||||||||||||||||
Sbjct: 811 tttctcaacaaggtcgacatc 831

>gb|AC093648.4| Homo sapiens BAC clone RP11-360A10 from 4, complete sequence
          Length = 84761

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    gttgctctcaaattttctcaa 41
             |||||||||||||||||||||
Sbjct: 13771 gttgctctcaaattttctcaa 13791

>gb|AF281862.1|AF281862 Neurospora crassa G protein alpha subunit GNA-3 (gna-3) gene,
            complete cds
          Length = 4349

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 34   tttctcaacaaggtcgacatc 54
            |||||||||||||||||||||
Sbjct: 2845 tttctcaacaaggtcgacatc 2865

>ref|XM_476996.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2082

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 382  ggccactgctatggtccgttggatcctgtcaacaatatcatcgtcaataccatctg 437
            ||||||||||| |||||  |||| ||||||  ||| ||||| ||||| ||||||||
Sbjct: 952  ggccactgctacggtccactggaccctgtctccaacatcattgtcaacaccatctg 1007

>gb|AY020317.1| Oryza sativa microsatellite MRG2642 containing (GA)X14, closest to
           marker C1456, genomic sequence
          Length = 228

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 gcctcggccctcagttttta 145
           ||||||||||||||||||||
Sbjct: 156 gcctcggccctcagttttta 137

>emb|Z78417.1|CEC35C5 Caenorhabditis elegans Cosmid C35C5, complete sequence
          Length = 44088

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  aacagtgtgctcaatgtgtt 257
            ||||||||||||||||||||
Sbjct: 1460 aacagtgtgctcaatgtgtt 1441

>gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 221805

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    tgccaggctgcccaaggaca 343
              ||||||||||||||||||||
Sbjct: 132595 tgccaggctgcccaaggaca 132614

>emb|AL020995.14|HS117O3 Human DNA sequence from clone RP1-117O3 on chromosome 1p33-34.3
             Contains the 3' end of a novel gene, the AK2 gene for
             adenylate kinase 2, the gene for ornithine
             decarboxylase-like (ODC-p) and a CpG island, complete
             sequence
          Length = 150997

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 353   cttgctaccaccacagcttgcttc 376
             |||||| |||||||||||||||||
Sbjct: 99148 cttgctgccaccacagcttgcttc 99125

>gb|AC116154.2| Homo sapiens chromosome 8, clone RP11-927P11, complete sequence
          Length = 196518

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     gctggaagttgctctcaaattttc 37
              ||||||||||||| ||||||||||
Sbjct: 136440 gctggaagttgctttcaaattttc 136463

>gb|AC068102.5| Homo sapiens chromosome 8, clone RP11-333M8, complete sequence
          Length = 174742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     gctggaagttgctctcaaattttc 37
              ||||||||||||| ||||||||||
Sbjct: 168171 gctggaagttgctttcaaattttc 168148

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     acaaggtcgacatcgtgctg 60
              ||||||||||||||||||||
Sbjct: 727374 acaaggtcgacatcgtgctg 727393

>ref|NM_077523.3| Caenorhabditis elegans Sex determination and Dosage Compensation
            defect family member (sdc-2) (sdc-2) mRNA, complete cds
          Length = 9211

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  aacagtgtgctcaatgtgtt 257
            ||||||||||||||||||||
Sbjct: 5985 aacagtgtgctcaatgtgtt 5966

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 414     caatatcatcgtcaataccatctggtat 441
               ||||||||||| ||| ||||||||||||
Sbjct: 5254038 caatatcatcgacaacaccatctggtat 5254065

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 126      gcctcggccctcagttttta 145
                ||||||||||||||||||||
Sbjct: 24862411 gcctcggccctcagttttta 24862392

>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0501G01
          Length = 154561

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   gcctcggccctcagttttta 145
             ||||||||||||||||||||
Sbjct: 85531 gcctcggccctcagttttta 85512

>emb|CR384055.4| Zebrafish DNA sequence from clone CH211-236C15 in linkage group 25,
             complete sequence
          Length = 90680

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   atcctgtcaacaatatcatc 423
             ||||||||||||||||||||
Sbjct: 74583 atcctgtcaacaatatcatc 74564

>gb|AF111934.1|AF111934 Caenorhabditis elegans SDC-2 (sdc-2) mRNA, complete cds
          Length = 9241

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  aacagtgtgctcaatgtgtt 257
            ||||||||||||||||||||
Sbjct: 6011 aacagtgtgctcaatgtgtt 5992

>dbj|AP004389.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1995B9
          Length = 161124

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    gctggaagttgctctcaaattttc 37
             ||||||||||||| ||||||||||
Sbjct: 73450 gctggaagttgctttcaaattttc 73473


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,884,152
Number of Sequences: 3902068
Number of extensions: 3884152
Number of successful extensions: 69883
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69705
Number of HSP's gapped (non-prelim): 178
length of query: 531
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 508
effective length of database: 17,143,297,704
effective search space: 8708795233632
effective search space used: 8708795233632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)