ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2j08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 109 8e-21
3emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa... 109 8e-21
4ref|XM_659668.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.41
5gb|AC125135.5| Mus musculus BAC clone RP24-321M1 from chromosome... 44 0.41
6gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.6
7gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 42 1.6
8gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 42 1.6
9gb|AC103881.4| Homo sapiens BAC clone RP11-638D14 from 2, comple... 42 1.6
10dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet... 42 1.6
11dbj|AP001153.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.6
12dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.6
13dbj|AP003181.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.6
14gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome 40 6.4
15ref|XM_480586.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
16gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 40 6.4
17ref|XM_455696.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F13684g ... 40 6.4
18ref|XM_846483.1| PREDICTED: Canis familiaris similar to spermato... 40 6.4
19gb|AC009152.8| Homo sapiens chromosome 16 clone RP11-567P19, com... 40 6.4
20gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome... 40 6.4
21ref|XM_823233.1| Trypanosoma brucei TREU927 dynein heavy chain (... 40 6.4
22gb|AC113490.10| Mus musculus chromosome 1, clone RP23-358M7, com... 40 6.4
23ref|XM_720222.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.4
24gb|BT010276.1| Drosophila melanogaster RE08772 full insert cDNA 40 6.4
25gb|AC069439.18| Homo sapiens 3 BAC RP11-12K11 (Roswell Park Canc... 40 6.4
26emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.4
27emb|BX571870.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 6.4
28emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 6.4
29gb|AC096742.3| Homo sapiens BAC clone RP11-328K4 from 4, complet... 40 6.4
30gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, co... 40 6.4
31gb|AC019294.7| Homo sapiens chromosome , clone RP11-24M17, compl... 40 6.4
32ref|XM_695035.1| PREDICTED: Danio rerio similar to MGC81609 prot... 40 6.4
33gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, r... 40 6.4
34gb|AC012167.5|AC012167 Drosophila melanogaster, chromosome 2R, r... 40 6.4
35dbj|AK100532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
36dbj|AK068147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
37emb|AL132985.4|CNS01DTT Human chromosome 14 DNA sequence BAC R-1... 40 6.4
38gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70... 40 6.4
39emb|AL079305.3|CNS00M8M Human chromosome 14 DNA sequence BAC R-3... 40 6.4
40dbj|AK116747.1| Ciona intestinalis cDNA, clone:ciad074b15, full ... 40 6.4 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  109 bits (55), Expect = 8e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                            
Query: 279      agcttcaaggaaagcgactagctgttgatctttcattggatcaagacacactcttctttg 338
                |||||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 23871025 agcttcaaggaaagagacttgctgttgatctttcgttggatcaagatacactcttctttg 23871084

                               
Query: 339      gaaatctttgcaaag 353
                | |||||||||||||
Sbjct: 23871085 ggaatctttgcaaag 23871099



 Score =  107 bits (54), Expect = 3e-20
 Identities = 63/66 (95%)
 Strand = Plus / Plus

                                                                            
Query: 77       gtgaaaggcgccgaggtgttcgtcggcgggttgccgcggtcggcgacggaggggacgctc 136
                ||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 23869220 gtgaaaggcgccgaggtgttcgtcggcgggttgccgcggtcggtgacggagcgggcgctc 23869279

                      
Query: 137      cgagag 142
                ||||||
Sbjct: 23869280 cgagag 23869285



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                            
Query: 207      agggatttggatttgtgcgatttgcagaaagggagtgtgcttatattgctaaaaggcaaa 266
                |||||| ||| |||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 23870347 agggatatggctttgtgcgatttgcggagagggagtgtgcttatattgctaaaaggcaaa 23870406



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 144      tattttctacctgtggtgagattgttgacttgcgcataatgaaggatcagaatgg 198
                |||||||| | ||||| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 23870195 tattttctccttgtggagagattgttgatttgcggataatgaaagatcagaatgg 23870249



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 36       gggcggcgtcgcatggggattacgacgagcaag 68
                |||||||||||||||| || |||||||||||||
Sbjct: 23869085 gggcggcgtcgcatggcgactacgacgagcaag 23869117



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 365      gaagaatttgaagaattgattc 386
                ||||||||||||||||||||||
Sbjct: 23871596 gaagaatttgaagaattgattc 23871617



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                            
Query: 413      gttgaccttgcaatggctccaaatcttgattcttcaacaagcaaaaggcgtctaaatcga 472
                ||||||||||||||||||| ||| | ||| ||||||    | ||||| ||||||||||||
Sbjct: 23873779 gttgaccttgcaatggctcgaaaccatgactcttcagttgggaaaagacgtctaaatcga 23873838
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  109 bits (55), Expect = 8e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                            
Query: 279      agcttcaaggaaagcgactagctgttgatctttcattggatcaagacacactcttctttg 338
                |||||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 23799230 agcttcaaggaaagagacttgctgttgatctttcgttggatcaagatacactcttctttg 23799289

                               
Query: 339      gaaatctttgcaaag 353
                | |||||||||||||
Sbjct: 23799290 ggaatctttgcaaag 23799304



 Score =  107 bits (54), Expect = 3e-20
 Identities = 63/66 (95%)
 Strand = Plus / Plus

                                                                            
Query: 77       gtgaaaggcgccgaggtgttcgtcggcgggttgccgcggtcggcgacggaggggacgctc 136
                ||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 23797425 gtgaaaggcgccgaggtgttcgtcggcgggttgccgcggtcggtgacggagcgggcgctc 23797484

                      
Query: 137      cgagag 142
                ||||||
Sbjct: 23797485 cgagag 23797490



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                            
Query: 207      agggatttggatttgtgcgatttgcagaaagggagtgtgcttatattgctaaaaggcaaa 266
                |||||| ||| |||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 23798552 agggatatggctttgtgcgatttgcggagagggagtgtgcttatattgctaaaaggcaaa 23798611



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 144      tattttctacctgtggtgagattgttgacttgcgcataatgaaggatcagaatgg 198
                |||||||| | ||||| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 23798400 tattttctccttgtggagagattgttgatttgcggataatgaaagatcagaatgg 23798454



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 36       gggcggcgtcgcatggggattacgacgagcaag 68
                |||||||||||||||| || |||||||||||||
Sbjct: 23797290 gggcggcgtcgcatggcgactacgacgagcaag 23797322



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 365      gaagaatttgaagaattgattc 386
                ||||||||||||||||||||||
Sbjct: 23799801 gaagaatttgaagaattgattc 23799822



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                            
Query: 413      gttgaccttgcaatggctccaaatcttgattcttcaacaagcaaaaggcgtctaaatcga 472
                ||||||||||||||||||| ||| | ||| ||||||    | ||||| ||||||||||||
Sbjct: 23801984 gttgaccttgcaatggctcgaaaccatgactcttcagttgggaaaagacgtctaaatcga 23802043
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>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144767

 Score =  109 bits (55), Expect = 8e-21
 Identities = 70/75 (93%)
 Strand = Plus / Minus

                                                                          
Query: 279    agcttcaaggaaagcgactagctgttgatctttcattggatcaagacacactcttctttg 338
              |||||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 102158 agcttcaaggaaagagacttgctgttgatctttcgttggatcaagatacactcttctttg 102099

                             
Query: 339    gaaatctttgcaaag 353
              | |||||||||||||
Sbjct: 102098 ggaatctttgcaaag 102084



 Score =  107 bits (54), Expect = 3e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                          
Query: 77     gtgaaaggcgccgaggtgttcgtcggcgggttgccgcggtcggcgacggaggggacgctc 136
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 103963 gtgaaaggcgccgaggtgttcgtcggcgggttgccgcggtcggtgacggagcgggcgctc 103904

                    
Query: 137    cgagag 142
              ||||||
Sbjct: 103903 cgagag 103898



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                          
Query: 207    agggatttggatttgtgcgatttgcagaaagggagtgtgcttatattgctaaaaggcaaa 266
              |||||| ||| |||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 102836 agggatatggctttgtgcgatttgcggagagggagtgtgcttatattgctaaaaggcaaa 102777



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                     
Query: 144    tattttctacctgtggtgagattgttgacttgcgcataatgaaggatcagaatgg 198
              |||||||| | ||||| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 102988 tattttctccttgtggagagattgttgatttgcggataatgaaagatcagaatgg 102934



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 36     gggcggcgtcgcatggggattacgacgagcaag 68
              |||||||||||||||| || |||||||||||||
Sbjct: 104098 gggcggcgtcgcatggcgactacgacgagcaag 104066



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 365    gaagaatttgaagaattgattc 386
              ||||||||||||||||||||||
Sbjct: 101587 gaagaatttgaagaattgattc 101566



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 413   gttgaccttgcaatggctccaaatcttgattcttcaacaagcaaaaggcgtctaaatcga 472
             ||||||||||||||||||| ||| | ||| ||||||    | ||||| ||||||||||||
Sbjct: 99404 gttgaccttgcaatggctcgaaaccatgactcttcagttgggaaaagacgtctaaatcga 99345
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>ref|XM_659668.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7156.2), mRNA
          Length = 1284

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 30   acaggagggcggcgtcgcatggggat 55
            ||||||||||||||||||||| ||||
Sbjct: 1169 acaggagggcggcgtcgcatgtggat 1194
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>gb|AC125135.5| Mus musculus BAC clone RP24-321M1 from chromosome 17, complete sequence
          Length = 182503

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 437   cttgattcttcaacaagcaaaa 458
             ||||||||||||||||||||||
Sbjct: 45940 cttgattcttcaacaagcaaaa 45961
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>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940136D9, complete sequence
          Length = 121820

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 106  gttgccgcggtcggcgacgga 126
            |||||||||||||||||||||
Sbjct: 1854 gttgccgcggtcggcgacgga 1834
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 107     ttgccgcggtcggcgacggag 127
               |||||||||||||||||||||
Sbjct: 1137742 ttgccgcggtcggcgacggag 1137762
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 432     caaatcttgattcttcaacaa 452
               |||||||||||||||||||||
Sbjct: 2975943 caaatcttgattcttcaacaa 2975923
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>gb|AC103881.4| Homo sapiens BAC clone RP11-638D14 from 2, complete sequence
          Length = 108100

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 409   atcagttgaccttgcaatggc 429
             |||||||||||||||||||||
Sbjct: 13371 atcagttgaccttgcaatggc 13391
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>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence
          Length = 150613

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 368   gaatttgaagaattgattcat 388
             |||||||||||||||||||||
Sbjct: 24025 gaatttgaagaattgattcat 24045
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>dbj|AP001153.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-886D15, complete
              sequence
          Length = 172487

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 219    ttgtgcgatttgcagaaaggg 239
              |||||||||||||||||||||
Sbjct: 171544 ttgtgcgatttgcagaaaggg 171564
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>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001,
             complete sequence
          Length = 103397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 328   actcttctttggaaatctttg 348
             |||||||||||||||||||||
Sbjct: 61802 actcttctttggaaatctttg 61782
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>dbj|AP003181.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-94P11, complete
            sequence
          Length = 165611

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 219  ttgtgcgatttgcagaaaggg 239
            |||||||||||||||||||||
Sbjct: 1117 ttgtgcgatttgcagaaaggg 1137
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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    ttgatctttcattggatcaa 322
              ||||||||||||||||||||
Sbjct: 552894 ttgatctttcattggatcaa 552875
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>ref|XM_480586.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3286

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 taagacattcaaagatgtca 407
           ||||||||||||||||||||
Sbjct: 952 taagacattcaaagatgtca 933
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>gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 13 of 13 of the
             complete sequence
          Length = 273275

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 358   gagtgctgaagaatttgaagaatt 381
             ||||| ||||||||||||||||||
Sbjct: 43091 gagtgatgaagaatttgaagaatt 43114
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>ref|XM_455696.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F13684g predicted mRNA
          Length = 1716

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 tgctgaagaatttgaagaat 380
           ||||||||||||||||||||
Sbjct: 201 tgctgaagaatttgaagaat 220
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>ref|XM_846483.1| PREDICTED: Canis familiaris similar to spermatogenesis associated
            5-like 1 (LOC609256), mRNA
          Length = 2686

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  ttggaaatctttgcaaagaa 355
            ||||||||||||||||||||
Sbjct: 2384 ttggaaatctttgcaaagaa 2403
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>gb|AC009152.8| Homo sapiens chromosome 16 clone RP11-567P19, complete sequence
          Length = 171127

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   aggcaaaagaatggggttga 279
             ||||||||||||||||||||
Sbjct: 36840 aggcaaaagaatggggttga 36859
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>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence
          Length = 222814

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   tgaccttgcaatggctccaa 434
             ||||||||||||||||||||
Sbjct: 60134 tgaccttgcaatggctccaa 60153
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>ref|XM_823233.1| Trypanosoma brucei TREU927 dynein heavy chain (Tb11.02.0030) partial
            mRNA
          Length = 12924

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  tttgaagaattgattcataa 390
            ||||||||||||||||||||
Sbjct: 8665 tttgaagaattgattcataa 8646
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>gb|AC113490.10| Mus musculus chromosome 1, clone RP23-358M7, complete sequence
          Length = 226924

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 429   ctccaaatcttgattcttcaacaa 452
             |||| |||||||||||||||||||
Sbjct: 55487 ctcctaatcttgattcttcaacaa 55510
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>ref|XM_720222.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04937)
           partial mRNA
          Length = 2724

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 364 tgaagaatttgaagaattga 383
           ||||||||||||||||||||
Sbjct: 42  tgaagaatttgaagaattga 61
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>gb|BT010276.1| Drosophila melanogaster RE08772 full insert cDNA
          Length = 3821

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  cttctttggaaatctttgca 350
            ||||||||||||||||||||
Sbjct: 3194 cttctttggaaatctttgca 3175
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>gb|AC069439.18| Homo sapiens 3 BAC RP11-12K11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 104485

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   actagctgttgatctttcat 314
             ||||||||||||||||||||
Sbjct: 50091 actagctgttgatctttcat 50072
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 361     tgctgaagaatttgaagaat 380
               ||||||||||||||||||||
Sbjct: 1268882 tgctgaagaatttgaagaat 1268863
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>emb|BX571870.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              12/17
          Length = 348505

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    gttgagcttcaaggaaagcg 294
              ||||||||||||||||||||
Sbjct: 192554 gttgagcttcaaggaaagcg 192535
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>emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             5/8
          Length = 348408

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 356   tggagtgctgaagaatttgaagaa 379
             |||| |||||||||||||||||||
Sbjct: 25360 tggattgctgaagaatttgaagaa 25337
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>gb|AC096742.3| Homo sapiens BAC clone RP11-328K4 from 4, complete sequence
          Length = 113991

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   actagctgttgatctttcat 314
             ||||||||||||||||||||
Sbjct: 11918 actagctgttgatctttcat 11899
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>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence
          Length = 180202

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    gtgctgaagaatttgaagaa 379
              ||||||||||||||||||||
Sbjct: 105035 gtgctgaagaatttgaagaa 105016
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>gb|AC019294.7| Homo sapiens chromosome , clone RP11-24M17, complete sequence
          Length = 164310

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   gtgctgaagaatttgaagaa 379
             ||||||||||||||||||||
Sbjct: 17238 gtgctgaagaatttgaagaa 17219
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>ref|XM_695035.1| PREDICTED: Danio rerio similar to MGC81609 protein (LOC571445),
           mRNA
          Length = 2031

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 304 tgatctttcattggatcaag 323
           ||||||||||||||||||||
Sbjct: 755 tgatctttcattggatcaag 736
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>gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone
             BACR04P18, complete sequence
          Length = 159455

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   cttctttggaaatctttgca 350
             ||||||||||||||||||||
Sbjct: 35964 cttctttggaaatctttgca 35983
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>gb|AC012167.5|AC012167 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone
              BACR27M17, complete sequence
          Length = 164443

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    cttctttggaaatctttgca 350
              ||||||||||||||||||||
Sbjct: 156569 cttctttggaaatctttgca 156588
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>dbj|AK100532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101L18, full
           insert sequence
          Length = 3285

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 taagacattcaaagatgtca 407
           ||||||||||||||||||||
Sbjct: 951 taagacattcaaagatgtca 932
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>dbj|AK068147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135P07, full
            insert sequence
          Length = 2226

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  taagacattcaaagatgtca 407
            ||||||||||||||||||||
Sbjct: 1582 taagacattcaaagatgtca 1563
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>emb|AL132985.4|CNS01DTT Human chromosome 14 DNA sequence BAC R-1103G16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196993

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    tcagaatggtgtttccaagg 209
              ||||||||||||||||||||
Sbjct: 146938 tcagaatggtgtttccaagg 146919
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>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete
              sequence
          Length = 298827

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    cttctttggaaatctttgca 350
              ||||||||||||||||||||
Sbjct: 135365 cttctttggaaatctttgca 135384
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>emb|AL079305.3|CNS00M8M Human chromosome 14 DNA sequence BAC R-306B9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188736

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    tcagaatggtgtttccaagg 209
              ||||||||||||||||||||
Sbjct: 118167 tcagaatggtgtttccaagg 118186
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>dbj|AK116747.1| Ciona intestinalis cDNA, clone:ciad074b15, full insert sequence
          Length = 1794

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 433  aaatcttgattcttcaacaa 452
            ||||||||||||||||||||
Sbjct: 1276 aaatcttgattcttcaacaa 1257


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,501,691
Number of Sequences: 3902068
Number of extensions: 4501691
Number of successful extensions: 92251
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92024
Number of HSP's gapped (non-prelim): 227
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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