ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2i18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467717.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 509 bits (257), Expect = e-141 Identities = 357/389 (91%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 15 ggccggcgccgcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatg 74 |||||| || ||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 303 ggccggagcggcggcgcag-aggagggacccatacgaggtgcttggggtggggcgtaatg 361 Query: 75 ccacggagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagata 134 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 362 ccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagaca 421 Query: 135 agaatgcagacgaccctgtggcctcggagaaattccaagaagccacattctcttacaaca 194 ||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 422 agaatgcagacgaccctgttgcctcggacaagtttcaagaagccacattctcttacaaca 481 Query: 195 tcctctcagatccggataaaaggcggcagtatgattcctctggattcgaggccatcgaag 254 | || |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct: 482 tactgtcagatcccgataagaggcggcagtatgattcctcgggattcgaggccattgaag 541 Query: 255 cagatagtcatgaattagagctggacctatcaagtctcaacactgtaaatacaatgtttg 314 |||||||||| ||| | ||| ||||||| |||||||| ||||||||||||||| |||||| Sbjct: 542 cagatagtcaggaactggagttggacctgtcaagtctgaacactgtaaatacagtgtttg 601 Query: 315 ctgctctgtttagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttag 374 |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 602 ctgccctgtttagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttag 661 Query: 375 aggaggcattgaatggctcagtggaaatt 403 |||| ||||||||||| || |||| |||| Sbjct: 662 aggaagcattgaatgggtcggtgggaatt 690 Score = 190 bits (96), Expect = 4e-45 Identities = 162/180 (90%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 436 gaaggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaa 495 |||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||| || Sbjct: 723 gaaggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaa 782 Query: 496 attggggttaggtgtgtagagttagttcaactgctaaaagtaaatttcaagttgctctat 555 | |||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||| Sbjct: 783 aatggggtta-gtgtgtagagttcaatcaactgctaaaagtaaa-ttcaagttgctatat 840 Query: 556 tttgaacctgaagaaaatgggtgggttaagccttgctttacaggaagatagtgcaaagac 615 || || |||||||||||| ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 841 ttcgagcctgaagaaaat-ggtgggttaagccttgctttacaggaagacagtgtaaagac 899
>ref|XM_506962.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.24 mRNA Length = 1954 Score = 509 bits (257), Expect = e-141 Identities = 357/389 (91%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 15 ggccggcgccgcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatg 74 |||||| || ||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 376 ggccggagcggcggcgcag-aggagggacccatacgaggtgcttggggtggggcgtaatg 434 Query: 75 ccacggagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagata 134 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 435 ccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagaca 494 Query: 135 agaatgcagacgaccctgtggcctcggagaaattccaagaagccacattctcttacaaca 194 ||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 495 agaatgcagacgaccctgttgcctcggacaagtttcaagaagccacattctcttacaaca 554 Query: 195 tcctctcagatccggataaaaggcggcagtatgattcctctggattcgaggccatcgaag 254 | || |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct: 555 tactgtcagatcccgataagaggcggcagtatgattcctcgggattcgaggccattgaag 614 Query: 255 cagatagtcatgaattagagctggacctatcaagtctcaacactgtaaatacaatgtttg 314 |||||||||| ||| | ||| ||||||| |||||||| ||||||||||||||| |||||| Sbjct: 615 cagatagtcaggaactggagttggacctgtcaagtctgaacactgtaaatacagtgtttg 674 Query: 315 ctgctctgtttagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttag 374 |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 675 ctgccctgtttagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttag 734 Query: 375 aggaggcattgaatggctcagtggaaatt 403 |||| ||||||||||| || |||| |||| Sbjct: 735 aggaagcattgaatgggtcggtgggaatt 763 Score = 190 bits (96), Expect = 4e-45 Identities = 162/180 (90%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 436 gaaggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaa 495 |||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||| || Sbjct: 796 gaaggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaa 855 Query: 496 attggggttaggtgtgtagagttagttcaactgctaaaagtaaatttcaagttgctctat 555 | |||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||| Sbjct: 856 aatggggtta-gtgtgtagagttcaatcaactgctaaaagtaaa-ttcaagttgctatat 913 Query: 556 tttgaacctgaagaaaatgggtgggttaagccttgctttacaggaagatagtgcaaagac 615 || || |||||||||||| ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 914 ttcgagcctgaagaaaat-ggtgggttaagccttgctttacaggaagacagtgtaaagac 972
>dbj|AK071144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082B04, full insert sequence Length = 1946 Score = 509 bits (257), Expect = e-141 Identities = 357/389 (91%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 15 ggccggcgccgcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatg 74 |||||| || ||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 302 ggccggagcggcggcgcag-aggagggacccatacgaggtgcttggggtggggcgtaatg 360 Query: 75 ccacggagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagata 134 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 361 ccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagaca 420 Query: 135 agaatgcagacgaccctgtggcctcggagaaattccaagaagccacattctcttacaaca 194 ||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 421 agaatgcagacgaccctgttgcctcggacaagtttcaagaagccacattctcttacaaca 480 Query: 195 tcctctcagatccggataaaaggcggcagtatgattcctctggattcgaggccatcgaag 254 | || |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct: 481 tactgtcagatcccgataagaggcggcagtatgattcctcgggattcgaggccattgaag 540 Query: 255 cagatagtcatgaattagagctggacctatcaagtctcaacactgtaaatacaatgtttg 314 |||||||||| ||| | ||| ||||||| |||||||| ||||||||||||||| |||||| Sbjct: 541 cagatagtcaggaactggagttggacctgtcaagtctgaacactgtaaatacagtgtttg 600 Query: 315 ctgctctgtttagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttag 374 |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 601 ctgccctgtttagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttag 660 Query: 375 aggaggcattgaatggctcagtggaaatt 403 |||| ||||||||||| || |||| |||| Sbjct: 661 aggaagcattgaatgggtcggtgggaatt 689 Score = 190 bits (96), Expect = 4e-45 Identities = 162/180 (90%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 436 gaaggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaa 495 |||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||| || Sbjct: 722 gaaggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaa 781 Query: 496 attggggttaggtgtgtagagttagttcaactgctaaaagtaaatttcaagttgctctat 555 | |||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||| Sbjct: 782 aatggggtta-gtgtgtagagttcaatcaactgctaaaagtaaa-ttcaagttgctatat 839 Query: 556 tttgaacctgaagaaaatgggtgggttaagccttgctttacaggaagatagtgcaaagac 615 || || |||||||||||| ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 840 ttcgagcctgaagaaaat-ggtgggttaagccttgctttacaggaagacagtgtaaagac 898
>dbj|AK068712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164G17, full insert sequence Length = 1954 Score = 509 bits (257), Expect = e-141 Identities = 357/389 (91%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 15 ggccggcgccgcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatg 74 |||||| || ||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 376 ggccggagcggcggcgcag-aggagggacccatacgaggtgcttggggtggggcgtaatg 434 Query: 75 ccacggagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagata 134 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 435 ccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagaca 494 Query: 135 agaatgcagacgaccctgtggcctcggagaaattccaagaagccacattctcttacaaca 194 ||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 495 agaatgcagacgaccctgttgcctcggacaagtttcaagaagccacattctcttacaaca 554 Query: 195 tcctctcagatccggataaaaggcggcagtatgattcctctggattcgaggccatcgaag 254 | || |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct: 555 tactgtcagatcccgataagaggcggcagtatgattcctcgggattcgaggccattgaag 614 Query: 255 cagatagtcatgaattagagctggacctatcaagtctcaacactgtaaatacaatgtttg 314 |||||||||| ||| | ||| ||||||| |||||||| ||||||||||||||| |||||| Sbjct: 615 cagatagtcaggaactggagttggacctgtcaagtctgaacactgtaaatacagtgtttg 674 Query: 315 ctgctctgtttagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttag 374 |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 675 ctgccctgtttagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttag 734 Query: 375 aggaggcattgaatggctcagtggaaatt 403 |||| ||||||||||| || |||| |||| Sbjct: 735 aggaagcattgaatgggtcggtgggaatt 763 Score = 190 bits (96), Expect = 4e-45 Identities = 162/180 (90%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 436 gaaggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaa 495 |||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||| || Sbjct: 796 gaaggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaa 855 Query: 496 attggggttaggtgtgtagagttagttcaactgctaaaagtaaatttcaagttgctctat 555 | |||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||| Sbjct: 856 aatggggtta-gtgtgtagagttcaatcaactgctaaaagtaaa-ttcaagttgctatat 913 Query: 556 tttgaacctgaagaaaatgggtgggttaagccttgctttacaggaagatagtgcaaagac 615 || || |||||||||||| ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 914 ttcgagcctgaagaaaat-ggtgggttaagccttgctttacaggaagacagtgtaaagac 972
>gb|AY107479.1| Zea mays PCO067935 mRNA sequence Length = 738 Score = 430 bits (217), Expect = e-117 Identities = 362/409 (88%), Gaps = 1/409 (0%) Strand = Plus / Plus Query: 19 ggcgccgcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatgccac 78 ||||| ||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 327 ggcgcggcggcgcag-aggagggacccatacgaggtgctcggggtggggcgtaatgctac 385 Query: 79 ggagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagataagaa 138 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 386 tgagcaggagatcaagagtgccttccgccgcatggcactcaagtaccatccagataagaa 445 Query: 139 tgcagacgaccctgtggcctcggagaaattccaagaagccacattctcttacaacatcct 198 | ||||||||||||| ||||| ||||| || ||||| ||||||||||| || || ||||| Sbjct: 446 ttcagacgaccctgttgcctcagagaagtttcaagaggccacattctcctataatatcct 505 Query: 199 ctcagatccggataaaaggcggcagtatgattcctctggattcgaggccatcgaagcaga 258 |||||||| || || ||||| |||||||| | || || || |||||||| |||||||| Sbjct: 506 gtcagatccagacaagaggcgccagtatgacgcatcagggtttgaggccattgaagcaga 565 Query: 259 tagtcatgaattagagctggacctatcaagtctcaacactgtaaatacaatgtttgctgc 318 |||||| ||| | ||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 566 tagtcaggaactggagctggacctatcaagtctcaatactgtaaatacagtgtttgctgc 625 Query: 319 tctgtttagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttagagga 378 |||||||||||| ||||| || |||||||||||||| || |||||||||||||||||||| Sbjct: 626 tctgtttagcaaactaggtgttccaatcaagaccactgtctcggcaacagttttagagga 685 Query: 379 ggcattgaatggctcagtggaaattgctcagcttcatttgggcaaatct 427 ||||||||| || ||||| || ||| |||||||||| ||||||||||| Sbjct: 686 ggcattgaacgggtcagtagagatttctcagcttcagctgggcaaatct 734
>gb|AY109656.1| Zea mays CL931_1 mRNA sequence Length = 2057 Score = 228 bits (115), Expect = 2e-56 Identities = 303/366 (82%), Gaps = 1/366 (0%) Strand = Plus / Plus Query: 25 gcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatgccacggagca 84 ||||||||| ||||||||||||||||||||||| |||||||| |||| ||||| || || Sbjct: 324 gcggcgcag-aggagggacccgtacgaggtgctcggggtgggccgcaccgccaccgacca 382 Query: 85 ggagatcaagagcgccttccgccgcatggccctcaagtaccatccagataagaatgcaga 144 |||||||||||| || ||||| |||||||| |||||||||||||| || ||||||| || Sbjct: 383 ggagatcaagagtgcgttccgacgcatggcgctcaagtaccatccggacaagaatggcga 442 Query: 145 cgaccctgtggcctcggagaaattccaagaagccacattctcttacaacatcctctcaga 204 |||||||| || || || | ||||| |||| ||||||||| || |||||||| ||||| Sbjct: 443 tgaccctgttgcatcagacaggttccaggaagtcacattctcctataacatcctgtcaga 502 Query: 205 tccggataaaaggcggcagtatgattcctctggattcgaggccatcgaagcagatagtca 264 ||| ||||| ||||||||||| ||| | || ||||| || || |||||| | |||||||| Sbjct: 503 tcccgataagaggcggcagtacgatacatcaggatttgatgcaatcgaatctgatagtca 562 Query: 265 tgaattagagctggacctatcaagtctcaacactgtaaatacaatgtttgctgctctgtt 324 ||| | ||||||||| | || ||||||||||||||||| || ||||||| |||| Sbjct: 563 ggaactggagctggacttgtcgagtctcaacactgtaaacacggtgtttgcagctcnnnn 622 Query: 325 tagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttagaggaggcatt 384 || ||||| || || ||||| || || || ||||| || |||||||||||||||||||| Sbjct: 623 nagtaagcttggtgtgccaattaaaacaactgtttcagctacagttttagaggaggcatt 682 Query: 385 gaatgg 390 |||||| Sbjct: 683 gaatgg 688 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 541 ttcaagttgctctattttgaacctgaagaaaatgg 575 ||||||||||| |||||||| | |||||||||||| Sbjct: 837 ttcaagttgctatattttgagcttgaagaaaatgg 871 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 437 aaggtggaaaaacaatcagctcatttttattcagtggacataac 480 ||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 735 aaggtggaaaagcaatcggcccatttctattctgtggatataac 778
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 168 bits (85), Expect = 1e-38 Identities = 115/125 (92%) Strand = Plus / Plus Query: 121 gtaccatccagataagaatgcagacgaccctgtggcctcggagaaattccaagaagccac 180 |||||||||||| |||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 31013749 gtaccatccagacaagaatgcagacgaccctgttgcctcggacaagtttcaagaagccac 31013808 Query: 181 attctcttacaacatcctctcagatccggataaaaggcggcagtatgattcctctggatt 240 ||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 31013809 attctcttacaacatactgtcagatcccgataagaggcggcagtatgattcctcgggatt 31013868 Query: 241 cgagg 245 ||||| Sbjct: 31013869 cgagg 31013873 Score = 153 bits (77), Expect = 8e-34 Identities = 102/109 (93%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 15 ggccggcgccgcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatg 74 |||||| || ||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 31013241 ggccggagcggcggcgcag-aggagggacccatacgaggtgcttggggtggggcgtaatg 31013299 Query: 75 ccacggagcaggagatcaagagcgccttccgccgcatggccctcaagta 123 |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31013300 ccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagta 31013348 Score = 111 bits (56), Expect = 3e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 438 aggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaaat 497 |||||||||| ||||||||||| |||||||| |||||||||||||| ||||||| ||| Sbjct: 31014295 aggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaaaa 31014354 Query: 498 tggggttaggtgtgtagagttagttcaactgctaaaagtaaatt 541 |||||||| |||||||||||| |||||||||||||||||||| Sbjct: 31014355 tggggtta-gtgtgtagagttcaatcaactgctaaaagtaaatt 31014397 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 325 tagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttagaggaggcatt 384 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 31014103 tagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttagaggaagcatt 31014162 Query: 385 gaatggctcagtggaaatt 403 |||||| || |||| |||| Sbjct: 31014163 gaatgggtcggtgggaatt 31014181 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 243 aggccatcgaagcagatagtcatgaattagagctggacctatcaagtctcaacactgtaa 302 ||||||| |||||||||||||| ||| | ||| ||||||| |||||||| |||||||||| Sbjct: 31013948 aggccattgaagcagatagtcaggaactggagttggacctgtcaagtctgaacactgtaa 31014007 Query: 303 atacaatgtttgctgctctgtttag 327 ||||| |||||||||| |||||||| Sbjct: 31014008 atacagtgtttgctgccctgtttag 31014032 Score = 69.9 bits (35), Expect = 9e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 545 agttgctctattttgaacctgaagaaaatgggtgggttaagccttgctttacagg 599 ||||||| ||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 31014807 agttgctatatttcgagcctgaagaaaatgg-tgggttaagccttgctttacagg 31014860
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 168 bits (85), Expect = 1e-38 Identities = 115/125 (92%) Strand = Plus / Plus Query: 121 gtaccatccagataagaatgcagacgaccctgtggcctcggagaaattccaagaagccac 180 |||||||||||| |||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 68705 gtaccatccagacaagaatgcagacgaccctgttgcctcggacaagtttcaagaagccac 68764 Query: 181 attctcttacaacatcctctcagatccggataaaaggcggcagtatgattcctctggatt 240 ||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 68765 attctcttacaacatactgtcagatcccgataagaggcggcagtatgattcctcgggatt 68824 Query: 241 cgagg 245 ||||| Sbjct: 68825 cgagg 68829 Score = 153 bits (77), Expect = 8e-34 Identities = 102/109 (93%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 15 ggccggcgccgcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatg 74 |||||| || ||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 68197 ggccggagcggcggcgcag-aggagggacccatacgaggtgcttggggtggggcgtaatg 68255 Query: 75 ccacggagcaggagatcaagagcgccttccgccgcatggccctcaagta 123 |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68256 ccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagta 68304 Score = 111 bits (56), Expect = 3e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 438 aggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaaat 497 |||||||||| ||||||||||| |||||||| |||||||||||||| ||||||| ||| Sbjct: 69251 aggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaaaa 69310 Query: 498 tggggttaggtgtgtagagttagttcaactgctaaaagtaaatt 541 |||||||| |||||||||||| |||||||||||||||||||| Sbjct: 69311 tggggtta-gtgtgtagagttcaatcaactgctaaaagtaaatt 69353 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 325 tagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttagaggaggcatt 384 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 69059 tagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttagaggaagcatt 69118 Query: 385 gaatggctcagtggaaatt 403 |||||| || |||| |||| Sbjct: 69119 gaatgggtcggtgggaatt 69137 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 243 aggccatcgaagcagatagtcatgaattagagctggacctatcaagtctcaacactgtaa 302 ||||||| |||||||||||||| ||| | ||| ||||||| |||||||| |||||||||| Sbjct: 68904 aggccattgaagcagatagtcaggaactggagttggacctgtcaagtctgaacactgtaa 68963 Query: 303 atacaatgtttgctgctctgtttag 327 ||||| |||||||||| |||||||| Sbjct: 68964 atacagtgtttgctgccctgtttag 68988 Score = 69.9 bits (35), Expect = 9e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 545 agttgctctattttgaacctgaagaaaatgggtgggttaagccttgctttacagg 599 ||||||| ||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 69763 agttgctatatttcgagcctgaagaaaatgg-tgggttaagccttgctttacagg 69816
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 168 bits (85), Expect = 1e-38 Identities = 115/125 (92%) Strand = Plus / Plus Query: 121 gtaccatccagataagaatgcagacgaccctgtggcctcggagaaattccaagaagccac 180 |||||||||||| |||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 2973 gtaccatccagacaagaatgcagacgaccctgttgcctcggacaagtttcaagaagccac 3032 Query: 181 attctcttacaacatcctctcagatccggataaaaggcggcagtatgattcctctggatt 240 ||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 3033 attctcttacaacatactgtcagatcccgataagaggcggcagtatgattcctcgggatt 3092 Query: 241 cgagg 245 ||||| Sbjct: 3093 cgagg 3097 Score = 153 bits (77), Expect = 8e-34 Identities = 102/109 (93%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 15 ggccggcgccgcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatg 74 |||||| || ||||||||| ||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 2465 ggccggagcggcggcgcag-aggagggacccatacgaggtgcttggggtggggcgtaatg 2523 Query: 75 ccacggagcaggagatcaagagcgccttccgccgcatggccctcaagta 123 |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2524 ccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagta 2572 Score = 111 bits (56), Expect = 3e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 438 aggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaaat 497 |||||||||| ||||||||||| |||||||| |||||||||||||| ||||||| ||| Sbjct: 3519 aggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaaaa 3578 Query: 498 tggggttaggtgtgtagagttagttcaactgctaaaagtaaatt 541 |||||||| |||||||||||| |||||||||||||||||||| Sbjct: 3579 tggggtta-gtgtgtagagttcaatcaactgctaaaagtaaatt 3621 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 325 tagcaagctaggagtaccaatcaagaccacagtttcggcaacagttttagaggaggcatt 384 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3327 tagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttagaggaagcatt 3386 Query: 385 gaatggctcagtggaaatt 403 |||||| || |||| |||| Sbjct: 3387 gaatgggtcggtgggaatt 3405 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 243 aggccatcgaagcagatagtcatgaattagagctggacctatcaagtctcaacactgtaa 302 ||||||| |||||||||||||| ||| | ||| ||||||| |||||||| |||||||||| Sbjct: 3172 aggccattgaagcagatagtcaggaactggagttggacctgtcaagtctgaacactgtaa 3231 Query: 303 atacaatgtttgctgctctgtttag 327 ||||| |||||||||| |||||||| Sbjct: 3232 atacagtgtttgctgccctgtttag 3256 Score = 69.9 bits (35), Expect = 9e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 545 agttgctctattttgaacctgaagaaaatgggtgggttaagccttgctttacagg 599 ||||||| ||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 4031 agttgctatatttcgagcctgaagaaaatgg-tgggttaagccttgctttacagg 4084
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 131 bits (66), Expect = 3e-27 Identities = 91/98 (92%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 25 gcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatgccacggagca 84 ||||||||| ||||||||||||||||||||||| || ||||||||||| ||||| || || Sbjct: 7174916 gcggcgcag-aggagggacccgtacgaggtgctcggcgtggggcgcaacgccaccgacca 7174858 Query: 85 ggagatcaagagcgccttccgccgcatggccctcaagt 122 |||||||||||||||||||||||||||||| ||||||| Sbjct: 7174857 ggagatcaagagcgccttccgccgcatggcgctcaagt 7174820 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 438 aggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaaat 497 |||||||||| |||||||||||||||||||| || |||||||||||| | ||||||||| Sbjct: 7173989 aggtggaaaagcaatcagctcatttttattctgttgacataacagaaaaggaagctaaaa 7173930 Query: 498 tggggttag 506 ||||||||| Sbjct: 7173929 tggggttag 7173921 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 167 ttccaagaagccacattctcttacaacatcctctcagatccggataaaaggcggcagta 225 ||||| |||| ||||||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 7174511 ttccaggaagtcacattctcctacaacatcctgtcagatcccgataagaggcggcagta 7174453 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 243 aggccatcgaagcagatagtcatgaattagagctggacctatcaagtctcaacactgtaa 302 ||||||||||||| ||||| || ||||| |||||||||||||| |||||||| || || | Sbjct: 7174368 aggccatcgaagccgatagccaggaattggagctggacctatcgagtctcaataccgtga 7174309 Query: 303 atacaatgtttgctgctct 321 | || ||||||||||||| Sbjct: 7174308 acaccgtgtttgctgctct 7174290 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 362 gcaacagttttagaggaggcattgaatgg 390 ||||||||||||||||||||||||||||| Sbjct: 7174151 gcaacagttttagaggaggcattgaatgg 7174123
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 131 bits (66), Expect = 3e-27 Identities = 91/98 (92%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 25 gcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatgccacggagca 84 ||||||||| ||||||||||||||||||||||| || ||||||||||| ||||| || || Sbjct: 52327 gcggcgcag-aggagggacccgtacgaggtgctcggcgtggggcgcaacgccaccgacca 52269 Query: 85 ggagatcaagagcgccttccgccgcatggccctcaagt 122 |||||||||||||||||||||||||||||| ||||||| Sbjct: 52268 ggagatcaagagcgccttccgccgcatggcgctcaagt 52231 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 438 aggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaaat 497 |||||||||| |||||||||||||||||||| || |||||||||||| | ||||||||| Sbjct: 51400 aggtggaaaagcaatcagctcatttttattctgttgacataacagaaaaggaagctaaaa 51341 Query: 498 tggggttag 506 ||||||||| Sbjct: 51340 tggggttag 51332 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 167 ttccaagaagccacattctcttacaacatcctctcagatccggataaaaggcggcagta 225 ||||| |||| ||||||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 51922 ttccaggaagtcacattctcctacaacatcctgtcagatcccgataagaggcggcagta 51864 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 243 aggccatcgaagcagatagtcatgaattagagctggacctatcaagtctcaacactgtaa 302 ||||||||||||| ||||| || ||||| |||||||||||||| |||||||| || || | Sbjct: 51779 aggccatcgaagccgatagccaggaattggagctggacctatcgagtctcaataccgtga 51720 Query: 303 atacaatgtttgctgctct 321 | || ||||||||||||| Sbjct: 51719 acaccgtgtttgctgctct 51701 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 362 gcaacagttttagaggaggcattgaatgg 390 ||||||||||||||||||||||||||||| Sbjct: 51562 gcaacagttttagaggaggcattgaatgg 51534
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 131 bits (66), Expect = 3e-27 Identities = 91/98 (92%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 25 gcggcgcagnaggagggacccgtacgaggtgctgggggtggggcgcaatgccacggagca 84 ||||||||| ||||||||||||||||||||||| || ||||||||||| ||||| || || Sbjct: 9920 gcggcgcag-aggagggacccgtacgaggtgctcggcgtggggcgcaacgccaccgacca 9862 Query: 85 ggagatcaagagcgccttccgccgcatggccctcaagt 122 |||||||||||||||||||||||||||||| ||||||| Sbjct: 9861 ggagatcaagagcgccttccgccgcatggcgctcaagt 9824 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 438 aggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaaat 497 |||||||||| |||||||||||||||||||| || |||||||||||| | ||||||||| Sbjct: 8993 aggtggaaaagcaatcagctcatttttattctgttgacataacagaaaaggaagctaaaa 8934 Query: 498 tggggttag 506 ||||||||| Sbjct: 8933 tggggttag 8925 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 167 ttccaagaagccacattctcttacaacatcctctcagatccggataaaaggcggcagta 225 ||||| |||| ||||||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 9515 ttccaggaagtcacattctcctacaacatcctgtcagatcccgataagaggcggcagta 9457 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 243 aggccatcgaagcagatagtcatgaattagagctggacctatcaagtctcaacactgtaa 302 ||||||||||||| ||||| || ||||| |||||||||||||| |||||||| || || | Sbjct: 9372 aggccatcgaagccgatagccaggaattggagctggacctatcgagtctcaataccgtga 9313 Query: 303 atacaatgtttgctgctct 321 | || ||||||||||||| Sbjct: 9312 acaccgtgtttgctgctct 9294 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 362 gcaacagttttagaggaggcattgaatgg 390 ||||||||||||||||||||||||||||| Sbjct: 9155 gcaacagttttagaggaggcattgaatgg 9127
>gb|BT018526.1| Zea mays clone EL01N0432H02.d mRNA sequence Length = 1294 Score = 101 bits (51), Expect = 3e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 248 atcgaagcagatagtcatgaattagagctggacctatcaagtctcaacactgtaaataca 307 |||||| | |||||||| ||| | ||||||||| | || ||||||||||||||||| || Sbjct: 24 atcgaatctgatagtcaggaactggagctggacttgtcgagtctcaacactgtaaacacg 83 Query: 308 atgtttgctgctctgtttagcaagctaggagtaccaatcaagaccacagtttcggcaaca 367 ||||||| ||||| ||||| ||||| || || ||||| || || || ||||| || ||| Sbjct: 84 gtgtttgcagctctttttagtaagcttggtgtgccaattaaaacaactgtttcagctaca 143 Query: 368 gttttagaggaggcattgaatgg 390 ||||||||||||||||||||||| Sbjct: 144 gttttagaggaggcattgaatgg 166 Score = 54.0 bits (27), Expect = 6e-04 Identities = 113/139 (81%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 437 aaggtggaaaaacaatcagctcatttttattcagtggacataacagaagaagaagctaaa 496 ||||||||||| ||||| || ||||| ||||| ||||| ||||| ||| || |||||||| Sbjct: 213 aaggtggaaaagcaatcggcccatttctattctgtggatataactgaaaaacaagctaaa 272 Query: 497 ttggggttaggtgtgtagagttagttcaactgctaaaagtaaatttcaagttgctctatt 556 ||||| || || ||| | ||| |||| | |||||| ||| ||||||||||| |||| Sbjct: 273 atggggcta-gtttgtcgtgttcactcaaacgataaaagcaaa-ttcaagttgctatatt 330 Query: 557 ttgaacctgaagaaaatgg 575 |||| | |||||||||||| Sbjct: 331 ttgagcttgaagaaaatgg 349
>ref|NM_193773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1212 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 296 actgtaaatacaatgtttgctgctctgtttagcaagctaggagtaccaatcaagaccaca 355 ||||| || |||||||||||||| || || |||||||| || || ||||||||||||||| Sbjct: 307 actgtgaacacaatgtttgctgcacttttcagcaagctcggtgttccaatcaagaccaca 366 Query: 356 gt 357 || Sbjct: 367 gt 368
>dbj|AK111736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047L09, full insert sequence Length = 1632 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 296 actgtaaatacaatgtttgctgctctgtttagcaagctaggagtaccaatcaagaccaca 355 ||||| || |||||||||||||| || || |||||||| || || ||||||||||||||| Sbjct: 549 actgtgaacacaatgtttgctgcacttttcagcaagctcggtgttccaatcaagaccaca 608 Query: 356 gt 357 || Sbjct: 609 gt 610
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 84 aggagatcaagagcgccttccgccgcatggccctcaagtacca 126 |||||||||||| |||| ||||||| |||||||||||||||| Sbjct: 167946 aggagatcaagaaggcctaccgccgcctggccctcaagtacca 167988
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 84 aggagatcaagagcgccttccgccgcatggccctcaagtacca 126 |||||||||||| |||| ||||||| |||||||||||||||| Sbjct: 1721854 aggagatcaagaaggcctaccgccgcctggccctcaagtacca 1721812
>ref|XM_967700.1| PREDICTED: Tribolium castaneum similar to CG6395-PB, isoform B (LOC661549), mRNA Length = 1428 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ctcaagtaccatccagataagaat 139 |||||||||||||||||||||||| Sbjct: 262 ctcaagtaccatccagataagaat 285
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 323 tttagcaagctaggagtaccaatcaagaccacagt 357 ||||||||||| || || ||||||||||||||||| Sbjct: 18040396 tttagcaagctcggtgttccaatcaagaccacagt 18040430
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 323 tttagcaagctaggagtaccaatcaagaccacagt 357 ||||||||||| || || ||||||||||||||||| Sbjct: 67637 tttagcaagctcggtgttccaatcaagaccacagt 67671
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 323 tttagcaagctaggagtaccaatcaagaccacagt 357 ||||||||||| || || ||||||||||||||||| Sbjct: 16837 tttagcaagctcggtgttccaatcaagaccacagt 16871
>gb|AC122253.5| Mus musculus BAC clone RP23-171K3 from chromosome 17, complete sequence Length = 197161 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 acgaggtgctgggggtggggcg 69 |||||||||||||||||||||| Sbjct: 138482 acgaggtgctgggggtggggcg 138461
>dbj|AK159075.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530051E08 product:unclassifiable, full insert sequence Length = 1618 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 acgaggtgctgggggtggggcg 69 |||||||||||||||||||||| Sbjct: 867 acgaggtgctgggggtggggcg 888
>gb|BC071184.1| Mus musculus heterogeneous nuclear ribonucleoprotein L-like, mRNA (cDNA clone IMAGE:30106888), complete cds Length = 2558 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 acgaggtgctgggggtggggcg 69 |||||||||||||||||||||| Sbjct: 1789 acgaggtgctgggggtggggcg 1810
>gb|AC120880.8| Mus musculus chromosome 3, clone RP24-553A12, complete sequence Length = 147280 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 aagaaggtggaaaaacaatca 454 ||||||||||||||||||||| Sbjct: 147149 aagaaggtggaaaaacaatca 147129
>gb|AC169121.3| Mus musculus chromosome 3, clone wi1-1639I9, complete sequence Length = 36597 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 aagaaggtggaaaaacaatca 454 ||||||||||||||||||||| Sbjct: 20040 aagaaggtggaaaaacaatca 20060
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 aagtaccatccagataagaat 139 ||||||||||||||||||||| Sbjct: 393024 aagtaccatccagataagaat 393004
>ref|NM_001014959.1| Bos taurus DnaJ (Hsp40) homolog, subfamily B, member 5 (DNAJB5), mRNA Length = 1297 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 110 atggccctcaagtaccatccagataagaa 138 |||||| | |||||||||||||||||||| Sbjct: 218 atggccttgaagtaccatccagataagaa 246
>emb|CR848676.7| Zebrafish DNA sequence from clone DKEY-265I7 in linkage group 9, complete sequence Length = 96536 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 gttcaactgctaaaagtaaat 540 ||||||||||||||||||||| Sbjct: 32107 gttcaactgctaaaagtaaat 32087
>gb|BC006360.1| Homo sapiens mRNA similar to heparan sulfate (glucosamine) 3-O-sulfotransferase 2 (cDNA clone IMAGE:4126274) Length = 3627 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ggcacgagggcggccggcgcc 24 ||||||||||||||||||||| Sbjct: 1 ggcacgagggcggccggcgcc 21
>gb|AF270055.1|AF270055 Staphylococcus epidermidis strain SR1 clone step.1044e09 genomic sequence Length = 2253 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 ataacagaagaagaagctaaa 496 ||||||||||||||||||||| Sbjct: 906 ataacagaagaagaagctaaa 886
>gb|AF269906.1|AF269906 Staphylococcus epidermidis strain SR1 clone step.1030b05 genomic sequence Length = 3416 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 ataacagaagaagaagctaaa 496 ||||||||||||||||||||| Sbjct: 2633 ataacagaagaagaagctaaa 2613
>gb|AF269615.1|AF269615 Staphylococcus epidermidis strain SR1 clone step.1013h06 genomic sequence Length = 3520 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 ataacagaagaagaagctaaa 496 ||||||||||||||||||||| Sbjct: 1594 ataacagaagaagaagctaaa 1614
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 aagtaccatccagataagaat 139 ||||||||||||||||||||| Sbjct: 390664 aagtaccatccagataagaat 390644
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 ataacagaagaagaagctaaa 496 ||||||||||||||||||||| Sbjct: 61324 ataacagaagaagaagctaaa 61304
>gb|BT021176.1| Bos taurus DnaJ (Hsp40) homolog, subfamily B, member 5 (DNAJB5), mRNA, complete cds Length = 1297 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 110 atggccctcaagtaccatccagataagaa 138 |||||| | |||||||||||||||||||| Sbjct: 218 atggccttgaagtaccatccagataagaa 246
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 ataacagaagaagaagctaaa 496 ||||||||||||||||||||| Sbjct: 2426539 ataacagaagaagaagctaaa 2426559
>ref|NM_102258.3| Arabidopsis thaliana ARL1; heat shock protein binding / unfolded protein binding AT1G24120 (ARL1) mRNA, complete cds Length = 1699 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaatgca 142 |||| |||||||||||||| ||||||| |||| Sbjct: 376 tggctctcaagtaccatccggataagactgca 407
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 549 gctctattttgaacctgaagaaaa 572 |||||||||| ||||||||||||| Sbjct: 1739954 gctctattttcaacctgaagaaaa 1739931
>gb|AC166369.5| Mus musculus BAC clone RP23-45A11 from chromosome 14, complete sequence Length = 226970 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 acataacagaagaagaagct 493 |||||||||||||||||||| Sbjct: 32373 acataacagaagaagaagct 32392
>ref|NM_194772.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0087H07.9), mRNA Length = 1968 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggccggcgccgcgg 28 |||||||||||||||||||| Sbjct: 489 gagggcggccggcgccgcgg 508
>ref|NM_189807.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2771 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 537 aggaggcattgaatggctca 518
>gb|BC034162.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 12, mRNA (cDNA clone MGC:35897 IMAGE:5043868), complete cds Length = 1789 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 488 tggccctcaagttccatccagacaagaa 515
>ref|XM_959046.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B14D6.710 [imported] - Neurospora crassa OR74A ) (NCU02849.1) partial mRNA Length = 1524 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 acggagcaggagatcaagag 96 |||||||||||||||||||| Sbjct: 1168 acggagcaggagatcaagag 1187
>gb|AC115928.10| Mus musculus chromosome 18, clone RP24-530D22, complete sequence Length = 182777 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 catccagataagaatgcaga 144 |||||||||||||||||||| Sbjct: 119614 catccagataagaatgcaga 119633
>ref|XM_330036.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B14D6.710 [imported] - Neurospora crassa OR74A ) (NCU02849.1) partial mRNA Length = 1524 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 acggagcaggagatcaagag 96 |||||||||||||||||||| Sbjct: 1168 acggagcaggagatcaagag 1187
>ref|XM_709432.1| Candida albicans SC5314 hypothetical protein (CaO19.11117), mRNA Length = 4692 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 attttgaacctgaagaaaatgggt 577 |||||||||||||||||| ||||| Sbjct: 3491 attttgaacctgaagaaactgggt 3514
>ref|XM_709384.1| Candida albicans SC5314 hypothetical protein (CaO19.3635), mRNA Length = 4692 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 attttgaacctgaagaaaatgggt 577 |||||||||||||||||| ||||| Sbjct: 3491 attttgaacctgaagaaactgggt 3514
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ggtggggcgcaatgccacgg 80 |||||||||||||||||||| Sbjct: 461269 ggtggggcgcaatgccacgg 461250
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 gggcggccggcgccgcggcgcagnagg 37 ||||||||||||| ||||||||| ||| Sbjct: 34248244 gggcggccggcgcggcggcgcaggagg 34248218
>gb|AC124770.4| Mus musculus BAC clone RP23-8J2 from chromosome 18, complete sequence Length = 216754 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 catccagataagaatgcaga 144 |||||||||||||||||||| Sbjct: 208524 catccagataagaatgcaga 208505
>gb|AC098744.3| Mus musculus BAC clone RP23-122P15 from 8, complete sequence Length = 204779 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggagaaattccaagaagcca 179 |||||||||||||||||||| Sbjct: 188358 ggagaaattccaagaagcca 188377
>gb|AC123039.3| Mus musculus BAC clone RP24-531I15 from 8, complete sequence Length = 147370 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggagaaattccaagaagcca 179 |||||||||||||||||||| Sbjct: 68997 ggagaaattccaagaagcca 69016
>gb|BC059326.1| Xenopus laevis hypothetical protein MGC69064, mRNA (cDNA clone MGC:69064 IMAGE:4968470), complete cds Length = 1415 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 124 ccatccagataagaatgcagacgaccct 151 |||||||||||||||| ||||| ||||| Sbjct: 182 ccatccagataagaatccagacaaccct 209
>gb|AY226825.1| Arabidopsis thaliana ARG1-like protein 1 (ARL1) mRNA, complete cds Length = 1626 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaatgca 142 |||| |||||||||||||| ||||||| |||| Sbjct: 376 tggctctcaagtaccatccggataagactgca 407
>emb|BX510948.13| Zebrafish DNA sequence from clone DKEY-4E4 in linkage group 8, complete sequence Length = 124751 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 tggacataacagaagaagaa 490 |||||||||||||||||||| Sbjct: 52324 tggacataacagaagaagaa 52305
>ref|XM_961762.1| PREDICTED: Tribolium castaneum similar to DnaJ protein homolog 1 (DROJ1) (LOC658632), mRNA Length = 939 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||||||| || |||||||| Sbjct: 80 tggccctcaagtaccaccccgataagaa 107
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggccggcgccgcgg 28 |||||||||||||||||||| Sbjct: 2237018 gagggcggccggcgccgcgg 2237037
>emb|BX842624.1| Neurospora crassa DNA linkage group I BAC clone B10D6 Length = 89019 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 acggagcaggagatcaagag 96 |||||||||||||||||||| Sbjct: 60701 acggagcaggagatcaagag 60720
>gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166083 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aatgtttgctgctctgttta 326 |||||||||||||||||||| Sbjct: 32190 aatgtttgctgctctgttta 32171
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ggcggccggcgccgcggcgc 31 |||||||||||||||||||| Sbjct: 3083667 ggcggccggcgccgcggcgc 3083648
>gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome 14, complete sequence Length = 210912 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 acataacagaagaagaagct 493 |||||||||||||||||||| Sbjct: 185585 acataacagaagaagaagct 185604
>emb|BX323801.8| Zebrafish DNA sequence from clone CH211-103E16, complete sequence Length = 181565 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 tggacataacagaagaagaa 490 |||||||||||||||||||| Sbjct: 106467 tggacataacagaagaagaa 106448
>ref|NM_169522.1| Drosophila melanogaster CG8863-RE, transcript variant E (CG8863), mRNA Length = 1820 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 183 tggccctcaagtaccatccggacaagaa 210
>ref|NM_169521.1| Drosophila melanogaster CG8863-RD, transcript variant D (CG8863), mRNA Length = 1868 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 231 tggccctcaagtaccatccggacaagaa 258
>ref|NM_169520.1| Drosophila melanogaster CG8863-RC, transcript variant C (CG8863), mRNA Length = 1818 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 181 tggccctcaagtaccatccggacaagaa 208
>ref|NM_169519.1| Drosophila melanogaster CG8863-RB, transcript variant B (CG8863), mRNA Length = 2051 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 414 tggccctcaagtaccatccggacaagaa 441
>ref|NM_142026.2| Drosophila melanogaster CG8863-RA, transcript variant A (CG8863), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 283 tggccctcaagtaccatccggacaagaa 310
>dbj|AK138495.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330042F11 product:DnaJ (Hsp40) homolog, subfamily B, member 12, full insert sequence Length = 1911 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 418 tggccctcaagttccatccagacaagaa 445
>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence Length = 156654 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggccggcgccgcgg 28 |||||||||||||||||||| Sbjct: 62672 gagggcggccggcgccgcgg 62691
>gb|AY074564.1| Arabidopsis thaliana At1g24120/F3I6_4 mRNA, complete cds Length = 1695 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaatgca 142 |||| |||||||||||||| ||||||| |||| Sbjct: 371 tggctctcaagtaccatccggataagactgca 402
>dbj|AK172274.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830112D22 product:DnaJ (Hsp40) homolog, subfamily B, member 12, full insert sequence Length = 1761 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 475 tggccctcaagttccatccagacaagaa 502
>gb|AY060982.1| Drosophila melanogaster GM13664 full length cDNA Length = 1859 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 212 tggccctcaagtaccatccggacaagaa 239
>dbj|AK166224.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830018D02 product:DnaJ (Hsp40) homolog, subfamily B, member 12, full insert sequence Length = 1319 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 475 tggccctcaagttccatccagacaagaa 502
>dbj|AK172485.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830209P09 product:DnaJ (Hsp40) homolog, subfamily B, member 12, full insert sequence Length = 2239 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 455 tggccctcaagttccatccagacaagaa 482
>emb|BX005326.16| Zebrafish DNA sequence from clone CH211-120C15, complete sequence Length = 124122 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tggacataacagaagaagaa 490 |||||||||||||||||||| Sbjct: 80258 tggacataacagaagaagaa 80277
>dbj|AK039945.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430034K01 product:hypothetical Thioredoxin-like structure containing protein, full insert sequence Length = 2818 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 acataacagaagaagaagct 493 |||||||||||||||||||| Sbjct: 1615 acataacagaagaagaagct 1634
>gb|AC155939.6| Mus musculus 10 BAC RP24-418P10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 158211 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 155684 tggccctcaagttccatccagacaagaa 155711
>gb|AC008360.3|AC008360 Drosophila melanogaster, chromosome 3R, region 87E-87F, BAC clone BACR06H18, complete sequence Length = 194672 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 84783 tggccctcaagtaccatccggacaagaa 84810
>dbj|AK034025.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330142K20 product:hypothetical Thioredoxin-like structure containing protein, full insert sequence Length = 2070 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 acataacagaagaagaagct 493 |||||||||||||||||||| Sbjct: 1737 acataacagaagaagaagct 1756
>dbj|AK082546.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230062D10 product:DnaJ (Hsp40) homolog, subfamily B, member 12, full insert sequence Length = 1226 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 438 tggccctcaagttccatccagacaagaa 465
>gb|AF373368.1| Xenopus sp. clone XE1 non-LTR retrotransposon LINE2 reverse transcriptase pseudogene, partial sequence Length = 671 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 438 aggtggaaaaacaatcagctcattttta 465 |||||||||||||||||| ||| ||||| Sbjct: 409 aggtggaaaaacaatcagttcagtttta 382
>dbj|AK089427.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730027B10 product:DnaJ (Hsp40) homolog, subfamily B, member 12, full insert sequence Length = 3020 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 457 tggccctcaagttccatccagacaagaa 484
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggccggcgccgcgg 28 |||||||||||||||||||| Sbjct: 2237018 gagggcggccggcgccgcgg 2237037
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 25378187 aggaggcattgaatggctca 25378168
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 11 gggcggccggcgccgcggcgcagnagg 37 ||||||||||||| ||||||||| ||| Sbjct: 34338716 gggcggccggcgcggcggcgcaggagg 34338690
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggacccgtacgaggtgctgg 59 |||||||||||||||||||| Sbjct: 8183632 ggacccgtacgaggtgctgg 8183651
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccacggagcaggagatcaag 94 |||||||||||||||||||| Sbjct: 2493848 ccacggagcaggagatcaag 2493829 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccacggagcaggagatcaag 94 |||||||||||||||||||| Sbjct: 692890 ccacggagcaggagatcaag 692909
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ggcggccggcgccgcggcgc 31 |||||||||||||||||||| Sbjct: 688628 ggcggccggcgccgcggcgc 688609
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 40.1 bits (20), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 11 gggcggccggcgccgcggcgcagnagg 37 ||||||||||||| ||||||||| ||| Sbjct: 86754 gggcggccggcgcggcggcgcaggagg 86780
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 71277 aggaggcattgaatggctca 71258
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 1904 aggaggcattgaatggctca 1885
>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20, complete sequence Length = 224173 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 tggacataacagaagaagaa 490 |||||||||||||||||||| Sbjct: 155398 tggacataacagaagaagaa 155379
>dbj|AK120072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013006F14, full insert sequence Length = 2203 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggccggcgccgcgg 28 |||||||||||||||||||| Sbjct: 520 gagggcggccggcgccgcgg 539
>dbj|AK100306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078G01, full insert sequence Length = 2771 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 537 aggaggcattgaatggctca 518
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gacccgtacgaggtgctggg 60 |||||||||||||||||||| Sbjct: 309477 gacccgtacgaggtgctggg 309496
>emb|BX957260.10| Zebrafish DNA sequence from clone DKEY-1N7 in linkage group 19, complete sequence Length = 188873 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aacactgtaaatacaatgtt 312 |||||||||||||||||||| Sbjct: 113526 aacactgtaaatacaatgtt 113545
>gb|AY103630.1| Zea mays PCO112537 mRNA sequence Length = 3140 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 607 aggaggcattgaatggctca 588
>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210862 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 200187 tggccctcaagttccatccagacaagaa 200160
>gb|AE003700.3| Drosophila melanogaster chromosome 3R, section 38 of 118 of the complete sequence Length = 228324 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 11284 tggccctcaagtaccatccggacaagaa 11311
>gb|L03366.1|RICRSS3 Oryza sativa sucrose synthase 3 (RSs3) gene, complete cds Length = 4586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 1171 aggaggcattgaatggctca 1152
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggccggcgccgcgg 28 |||||||||||||||||||| Sbjct: 2236969 gagggcggccggcgccgcgg 2236988
>emb|AL974310.15| Zebrafish DNA sequence from clone DKEY-14J6, complete sequence Length = 183864 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 aacactgtaaatacaatgtt 312 |||||||||||||||||||| Sbjct: 36792 aacactgtaaatacaatgtt 36773
>ref|NM_019965.2| Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 12 (Dnajb12), mRNA Length = 1789 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 488 tggccctcaagttccatccagacaagaa 515
>gb|AC003923.1|AC003923 Drosophila melanogaster (P1 DS04219 (D36)) DNA sequence, complete sequence Length = 82393 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 tggccctcaagtaccatccagataagaa 138 ||||||||||||||||||| || ||||| Sbjct: 63744 tggccctcaagtaccatccggacaagaa 63717
>gb|L29418.1|MZESUS1 Zea mays sus1 gene, complete cds Length = 8648 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 4208 aggaggcattgaatggctca 4189
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 aagtaccatccagataagaa 138 |||||||||||||||||||| Sbjct: 1143209 aagtaccatccagataagaa 1143228
>emb|AL845490.8| Mouse DNA sequence from clone RP23-259M16 on chromosome 2, complete sequence Length = 200794 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 aaattgctcagcttcatttg 418 |||||||||||||||||||| Sbjct: 4170 aaattgctcagcttcatttg 4189
>gb|L33244.1|MZESUS1C Zea mays (clone pSM8) sucrose synthase 2 (Sus1) gene, complete cds Length = 7341 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 3317 aggaggcattgaatggctca 3298
>gb|L22296.1|MZESUS1A Zea mays sucrose synthase (Sus1) mRNA, complete cds Length = 2908 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 aggaggcattgaatggctca 394 |||||||||||||||||||| Sbjct: 472 aggaggcattgaatggctca 453
>dbj|AB028860.1| Mus musculus mRNA for mDj10, complete cds Length = 1495 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 tggccctcaagtaccatccagataagaa 138 |||||||||||| ||||||||| ||||| Sbjct: 461 tggccctcaagttccatccagacaagaa 488 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,891,235 Number of Sequences: 3902068 Number of extensions: 6891235 Number of successful extensions: 132835 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131595 Number of HSP's gapped (non-prelim): 1222 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
