ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bah63n02 | 665 | BJ482176 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 433 | full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| bah63n01 | 643 | BJ482175 | not_full | gb|BT016485.1| Zea mays clone Contig318 mRNA sequence Length = 1267 | 500 | full | RSSA_SOYBN (O22518) 40S ribosomal protein SA (p40) Length = 310 | 185 | -- | --- | - | -- | --- | - |
| bah63m24 | 639 | BJ482174 | not_full | gb|AY736124.1| Triticum aestivum ADP-ribosylation factor mRNA, complete cds Length = 583 | 500 | not_full | ARF_MAIZE (P49076) ADP-ribosylation factor Length = 180 | 500 | -- | --- | - | -- | --- | - |
| bah63m23 | 547 | BJ482173 | not_full | ref|NM_102014.1| Arabidopsis thaliana ATP binding / ubiquitin-protein ligase/ zinc ion binding AT1G21650 mRNA, complete cds Length = 4740 | 70 | not_full | SECA_SYNP7 (Q55357) Preprotein translocase secA subunit Length = 948 | 81 | -- | --- | - | -- | --- | - |
| bah63m22 | 545 | BJ482172 | not_full | dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 | 155 | full | NU2M_OENBE (P93401) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH dehydrogenase subunit 2) Length = 488 | 5 | -- | --- | - | -- | --- | - |
| bah63m21 | 642 | BJ482171 | not_full | ref|XM_466814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 978 | 111 | not_full | GLTP_HUMAN (Q9NZD2) Glycolipid transfer protein (GLTP) Length = 208 | 20 | -- | --- | - | -- | --- | - |
| bah63m20 | 665 | BJ482170 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 422 | full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 163 | -- | --- | - | -- | --- | - |
| bah63m19 | 637 | BJ482169 | not_full | ref|XM_464574.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 | 83 | not_full | TLC1_SOLTU (O24381) Plastidic ATP/ADP-transporter Length = 631 | 26 | -- | --- | - | -- | --- | - |
| bah63m18 | 655 | BJ482168 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 472 | not_full | CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor (LHCII type I CAB-1B) (LHCP) Length = 265 | 143 | -- | --- | - | -- | --- | - |
| bah63m17 | 634 | BJ482167 | not_full | ref|XM_506898.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1148_D05.1 patrial mRNA Length = 1652 | 48 | not_full | ARGE_DICDI (P54638) Acetylornithine deacetylase (EC 3.5.1.16) (Acetylornithinase) (AO) (N-acetylornithinase) (NAO) Length = 448 | 41 | -- | --- | - | -- | --- | - |
| bah63m16 | 600 | BJ482166 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 124 | full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 38 | -- | --- | - | -- | --- | - |
| bah63m14 | 625 | BJ551621 | not_full | ref|XM_466806.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1726 | 75 | not_full | SUCB_ARATH (O82662) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) Length = 421 | 109 | -- | --- | - | -- | --- | - |
| bah63m11 | 601 | BJ482165 | not_full | dbj|AK111686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170K17, full insert sequence Length = 4534 | 22 | not_full | PRP46_YEAST (Q12417) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing protein 46) (Complexed with CEF1 protein 1) (PRP19-associated complex protein 50) (PRP nineteen-associated complex protein 50) Length = 451 | 38 | -- | --- | - | -- | --- | - |
| bah63m07 | 640 | BJ482163 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 60 | not_full | HYPA_CLOPE (Q46205) Protein hypA Length = 973 | 52 | -- | --- | - | -- | --- | - |
| bah63m05 | 511 | BJ482162 | not_full | gb|DQ409174.1| Bambusa ventricosa putative chitin-inducible gibberellin-responsive protein mRNA, complete cds Length = 2102 | 76 | not_full | CIGR2_ORYSA (Q8GVE1) Chitin-inducible gibberellin-responsive protein 2 Length = 544 | 28 | -- | --- | - | -- | --- | - |
| bah63m04 | 180 | BJ482161 | not_full | ref|XM_474428.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 624 | 16 | not_full | U235_MOUSE (Q9CRC3) UPF0235 protein C15orf40 homolog Length = 126 | 10 | -- | --- | - | -- | --- | - |
| bah63m03 | 650 | BJ482160 | not_full | dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full insert sequence Length = 1970 | 73 | not_full | ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 | 245 | -- | --- | - | -- | --- | - |
| bah63m01 | 409 | BJ482159 | not_full | ref|XM_465059.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2568 | 229 | not_full | CH602_MYCLE (P09239) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2) (65 kDa antigen) Length = 540 | 20 | -- | --- | - | -- | --- | - |
| bah63l23 | 633 | BJ482158 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 58 | not_full | YPFP_BACSU (P54166) Putative glycosyl transferase ypfP (EC 2.-.-.-) Length = 382 | 6 | -- | --- | - | -- | --- | - |
| bah63l22 | 606 | BJ482157 | not_full | ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 | 500 | not_full | R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3 Length = 206 | 54 | -- | --- | - | -- | --- | - |
| bah63l21 | 573 | BJ482156 | not_full | ref|NM_188410.1| Oryza sativa (japonica cultivar-group), Ozsa8136 predicted mRNA Length = 1542 | 86 | not_full | DHX35_PONPY (Q5RBD4) Probable ATP-dependent RNA helicase DHX35 (EC 3.6.1.-) (DEAH box protein 35) Length = 720 | 74 | -- | --- | - | -- | --- | - |
| bah63l20 | 590 | BJ551620 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 69 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 126 | -- | --- | - | -- | --- | - |
| bah63l19 | 551 | BJ482155 | not_full | ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 | 500 | not_full | PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor (CP22) Length = 276 | 24 | -- | --- | - | -- | --- | - |
| bah63l18 | 567 | BJ482154 | full | gb|BT009537.1| Triticum aestivum clone wr1.pk0139.g3:fis, full insert mRNA sequence Length = 1021 | 366 | not_full | PSY_DAUCA (Q9SSU8) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) Length = 398 | 30 | -- | --- | - | -- | --- | - |
| bah63l17 | 608 | BJ482153 | not_full | ref|NM_192819.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2100 | 27 | not_full | CYTSA_XENTR (Q2KN96) Cytospin-A Length = 1101 | 7 | -- | --- | - | -- | --- | - |
| bah63l15 | 649 | BJ482152 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| bah63l14 | 597 | BJ482151 | not_full | ref|XM_478776.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3961 | 500 | not_full | RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 | 22 | -- | --- | - | -- | --- | - |
| bah63l11 | 526 | BJ482150 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 386 | not_full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 111 | -- | --- | - | -- | --- | - |
| bah63l10 | 645 | BJ482149 | not_full | ref|XM_483589.1| Oryza sativa (japonica cultivar-group), mRNA Length = 980 | 500 | not_full | RL71_ARATH (P60040) 60S ribosomal protein L7-1 Length = 242 | 46 | -- | --- | - | -- | --- | - |
| bah63l09 | 563 | BJ482148 | not_full | emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 | 8 | not_full | RS5A_DROME (Q24186) 40S ribosomal protein S5a Length = 228 | 5 | -- | --- | - | -- | --- | - |
| bah63l07 | 577 | BJ482147 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 404 | not_full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 106 | -- | --- | - | -- | --- | - |
| bah63l06 | 627 | BJ482146 | not_full | ref|XM_464895.1| Oryza sativa (japonica cultivar-group), mRNA Length = 393 | 60 | not_full | U161_ARATH (Q9SR32) Hypothetical UPF0161 protein At3g09310 Length = 90 | 122 | -- | --- | - | -- | --- | - |
| bah63l05 | 597 | BJ482145 | not_full | gb|BT009294.1| Triticum aestivum clone wlm1.pk0005.c5:fis, full insert mRNA sequence Length = 919 | 461 | not_full | THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) Length = 254 | 253 | -- | --- | - | -- | --- | - |
| bah63l03 | 585 | BJ551619 | not_full | gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1577 | 150 | full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 70 | -- | --- | - | -- | --- | - |
| bah63l02 | 491 | BJ482144 | not_full | emb|AJ872264.1| Festuca glaucescens x Lolium multiflorum microsatellite DNA, clone B5-D12 Length = 620 | 26 | not_full | P2SAF_ARATH (O82660) Photosystem II stability/assembly factor HCF136, chloroplast precursor Length = 403 | 31 | -- | --- | - | -- | --- | - |
| bah63l01 | 547 | BJ482143 | not_full | ref|NM_191560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 | 124 | not_full | ANGLT_ROSHC (Q4R1I9) Anthocyanidin 5,3-O-glucosyltransferase (EC 2.4.1.-) (UDP-glucose: anthocyanidin 5,3-O-glucosyltransferase) Length = 473 | 58 | -- | --- | - | -- | --- | - |
| bah63k24 | 616 | BJ482142 | not_full | emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 | 500 | full | ENPL_HORVU (P36183) Endoplasmin homolog precursor (GRP94 homolog) Length = 809 | 225 | -- | --- | - | -- | --- | - |
| bah63k22 | 559 | BJ482141 | not_full | emb|Y07636.1|TAFKBP77 T.aestivum mRNA for peptidylprolyl isomerase Length = 1999 | 150 | not_full | FKB70_WHEAT (Q43207) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) Length = 559 | 196 | -- | --- | - | -- | --- | - |
| bah63k20 | 570 | BJ482140 | not_full | gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence Length = 1556 | 243 | not_full | FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) Length = 662 | 273 | -- | --- | - | -- | --- | - |
| bah63k19 | 555 | BJ482139 | not_full | gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 | 48 | not_full | ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 | 39 | -- | --- | - | -- | --- | - |
| bah63k17 | 582 | BJ482138 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 204 | full | NORM_MANSM (Q65SY9) Probable multidrug resistance protein norM (Multidrug-efflux transporter) Length = 465 | 6 | -- | --- | - | -- | --- | - |
| bah63k16 | 588 | BJ482137 | not_full | gb|BT009295.1| Triticum aestivum clone wlm1.pk0005.d6:fis, full insert mRNA sequence Length = 1948 | 70 | not_full | ERG1_PANGI (O48651) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) Length = 539 | 41 | -- | --- | - | -- | --- | - |
| bah63k15 | 859 | BJ482136 | not_full | gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 | 25 | not_full | CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1) Length = 980 | 86 | -- | --- | - | -- | --- | - |
| bah63k14 | 501 | BJ482135 | full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 380 | not_full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 109 | -- | --- | - | -- | --- | - |
| bah63k13 | 626 | BJ482134 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 416 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 167 | -- | --- | - | -- | --- | - |
| bah63k11 | 550 | BJ482133 | not_full | gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 | 113 | not_full | RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 | 248 | -- | --- | - | -- | --- | - |
| bah63k10 | 573 | BJ482132 | not_full | emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 | 67 | not_full | CDT1_HUMAN (Q9H211) DNA replication factor Cdt1 (Double parked homolog) (DUP) Length = 546 | 22 | -- | --- | - | -- | --- | - |
| bah63k09 | 482 | BJ551618 | not_full | ref|NM_186220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2031 | 93 | not_full | LEC_BOWMI (P42088) Lectin (Agglutinin) (BMA) [Contains: Lectin beta chain; Lectin alpha chain] Length = 240 | 58 | -- | --- | - | -- | --- | - |
| bah63k06 | 572 | BJ482131 | not_full | dbj|AK069807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O14, full insert sequence Length = 2020 | 98 | not_full | TRX_DROME (P20659) Protein trithorax Length = 3726 | 3 | -- | --- | - | -- | --- | - |
| bah63k05 | 603 | BJ482130 | not_full | ref|XM_476319.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1167 | 55 | not_full | PP2C3_YEAST (P34221) Protein phosphatase 2C homolog 3 (EC 3.1.3.16) (PP2C-3) Length = 468 | 89 | -- | --- | - | -- | --- | - |
