>RS5A_DROME (Q24186) 40S ribosomal protein S5a|
          Length = 228

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +2

Query: 131 IQSTDEFPFLDPNLYWSCSTSTVDD**VRRRFPLREEFADGLEHSDLVAHCRAAAGRTGG 310
           + ST E P +     WSC   TV+D  ++    ++E+FA  L HS         AGR   
Sbjct: 32  VVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHS---------AGRYAA 82

Query: 311 KSGRGVEC 334
           K  R  +C
Sbjct: 83  KRFRKAQC 90

>PTN1_MOUSE (P35821) Tyrosine-protein phosphatase non-receptor type 1 (EC|
           3.1.3.48) (Protein-tyrosine phosphatase 1B) (PTP-1B)
           (Protein-protein-tyrosine phosphatase HA2) (PTP-HA2)
          Length = 432

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 224 FPLREEFADGLEHSDLVAHCRAAAGRTG 307
           F +RE  +  LEH  +V HC A  GR+G
Sbjct: 196 FKVRESGSLSLEHGPIVVHCSAGIGRSG 223

>CAC1H_MOUSE (O88427) Voltage-dependent T-type calcium channel alpha-1H subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.2)
          Length = 2365

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 344 PRSGIRLLDRFCLRSSPPRHGNGPPD 267
           P +G   L R C+  SPP  G+GPPD
Sbjct: 544 PGAGDTRLVRACVPPSPPSPGHGPPD 569

>DXR_XANAC (Q8PML1) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 396

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 17/74 (22%)
 Frame = -1

Query: 311 CLRSSPPRHG--------NGPPDLSVRGRRRTPLAAETCAVLINHPRW---------MCC 183
           CLRS     G        +G P    RGR R  LAA T A  + HP+W            
Sbjct: 164 CLRSCDASRGVRRVILTASGGP---FRGRDRAALAAVTPAQAVAHPKWSMGPKISVDSAT 220

Query: 182 MTSKGLDQERGTHL 141
           + +KGL+     HL
Sbjct: 221 LMNKGLEVIEAHHL 234

>CAC1H_RAT (Q9EQ60) Voltage-dependent T-type calcium channel alpha-1H subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.2)
          Length = 2359

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 344 PRSGIRLLDRFCLRSSPPRHGNGPPD 267
           P +G   L R C   SPP  G+GPPD
Sbjct: 544 PGAGDNRLVRACAPPSPPSPGHGPPD 569


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,211,890
Number of Sequences: 219361
Number of extensions: 1733335
Number of successful extensions: 4869
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4869
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)