ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63k09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_186220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2031 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Plus Query: 294 acctctcaccagtgctcacagaccaagcataccttggcttctcatcctccacaggtttaa 353 |||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 695 acctctcaacagtgctaacagatcaagcataccttggcttctcatcctcaacaggcttaa 754 Query: 354 gcacggggcatcactatgtgcttggttggagctttggaatgggcacccctgctccagtca 413 |||| || ||||||||||| ||||||||||| ||||| || | ||||||||| ||| Sbjct: 755 gcacaggacatcactatgttcttggttggagttttgggctgaatattcctgctccaatca 814 Query: 414 tagatcccaccaaactacccaagctgccttaccttggtccaagacctcaatccaaactcc 473 | || ||||| || ||||| || |||||| | ||| ||||||||||||||||||||||| Sbjct: 815 ttgaccccacaaagctacctaaactgcctaatcttagtccaagacctcaatccaaactct 874 Query: 474 tagagattg 482 ||||||||| Sbjct: 875 tagagattg 883 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 |||||||||||||||||||| || |||||||| || || |||||||| |||||||| Sbjct: 454 gagttcggggacatcgacaataatcatgtcgggattgatatcaacagtctcaactc 509
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Minus Query: 294 acctctcaccagtgctcacagaccaagcataccttggcttctcatcctccacaggtttaa 353 |||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1664711 acctctcaacagtgctaacagatcaagcataccttggcttctcatcctcaacaggcttaa 1664652 Query: 354 gcacggggcatcactatgtgcttggttggagctttggaatgggcacccctgctccagtca 413 |||| || ||||||||||| ||||||||||| ||||| || | ||||||||| ||| Sbjct: 1664651 gcacaggacatcactatgttcttggttggagttttgggctgaatattcctgctccaatca 1664592 Query: 414 tagatcccaccaaactacccaagctgccttaccttggtccaagacctcaatccaaactcc 473 | || ||||| || ||||| || |||||| | ||| ||||||||||||||||||||||| Sbjct: 1664591 ttgaccccacaaagctacctaaactgcctaatcttagtccaagacctcaatccaaactct 1664532 Query: 474 tagagattg 482 ||||||||| Sbjct: 1664531 tagagattg 1664523 Score = 153 bits (77), Expect = 6e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 286 agtctatgacctctcaccagtgctcacagaccaagcataccttggcttctcatcctccac 345 ||||||| |||||||| ||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 1674709 agtctataacctctcaacagtgctaacagatcaagcataccttggcttctcatcctcaac 1674650 Query: 346 aggtttaagcacggggcatcactatgtgcttggttggagctttggaatgggcacccctgc 405 || |||||||| || ||||||||||| ||||||||||| ||||| || | ||||| Sbjct: 1674649 gggcttaagcacaggacatcactatgttcttggttggagttttgggctgaatattcctgc 1674590 Query: 406 tccagtcatagatcccaccaaactacccaagctgccttaccttggtccaagacctcaatc 465 |||| |||| || ||||| || ||||| || |||||| | ||| |||||| ||||||||| Sbjct: 1674589 tccaatcattgaccccacaaagctacctaaactgcctaatcttagtccaaaacctcaatc 1674530 Query: 466 caaactcctagagattg 482 ||||||| ||||||||| Sbjct: 1674529 caaactcttagagattg 1674513 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 ||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 1776159 cttcgtcgtcgagctcgacaccatccagaacaccgacttcatggacatcaacaacaacca 1776218 Query: 61 tgtcggcatagacatcaacagc 82 ||||||| | |||||||||||| Sbjct: 1776219 tgtcggcgtcgacatcaacagc 1776240 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 ||||||||||||||||||| |||| |||| |||||||||| |||||||||| |||||| Sbjct: 23237312 ttcgccgtcgagctcgacatcatcacgaaccccgagttcggcgacatcgacagcaaccac 23237253 Query: 62 gtcggcatagacatcaacagcctca 86 |||||| | ||| |||| ||||||| Sbjct: 23237252 gtcggcgtcgacgtcaatagcctca 23237228 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 ||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| | Sbjct: 1624973 tcgccgtcgagctcgacaccatccagagcgtcgagttcagggacatcaacgccaaccacg 1624914 Query: 63 tcggcatagacatcaacagcctc 85 ||||| | ||||||||| ||||| Sbjct: 1624913 tcggcgtcgacatcaacggcctc 1624891 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 |||||||||||||||||||||| |||||| ||||||| | ||||| || ||| ||||| Sbjct: 9294494 tcgccgtcgagctcgacaccatgcagaacgacgagttccgcgacattaacgacagccatg 9294435 Query: 63 tcggcatagacatcaacagcctc 85 | || || ||||||||||||||| Sbjct: 9294434 ttggaatcgacatcaacagcctc 9294412 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 321 cataccttggcttctcatcctccacaggtttaagcacggggcatcactatgtgcttggtt 380 |||| ||||| ||||||||||| ||||| |||||||| | |||||||| || ||||||| Sbjct: 1699433 catatcttggtttctcatcctcaacaggcttaagcacagctcatcactacgttcttggtt 1699374 Query: 381 ggagctttgg 390 |||||||||| Sbjct: 1699373 ggagctttgg 1699364 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 |||||||||||||||||||| || |||||||| || || |||||||| |||||||| Sbjct: 1664952 gagttcggggacatcgacaataatcatgtcgggattgatatcaacagtctcaactc 1664897 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 7 cgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtcgg 66 |||||||||||||||| |||||||| ||||||| | || |||||| |||||| |||| Sbjct: 1637001 cgtcgagctcgacaccgaccagaacaacgagttccgtgatatcgacggcaaccacatcgg 1636942 Query: 67 catagacatcaacagcctca 86 | | |||||||||||||||| Sbjct: 1636941 cgtcgacatcaacagcctca 1636922 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacat 75 ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 1699701 gagtttggggacatcgacaacaaccatgttggcattgacat 1699661 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||| | ||| | ||||||| | |||||| || ||||||| Sbjct: 1629283 cttcgccgtcgagctcgacaccctgcagcaggacgagttccgcgacatcaacgacaacca 1629224 Query: 61 tgtcggcatagacatcaacagcctc 85 |||||| | ||||||||| ||||| Sbjct: 1629223 cgtcggcgtcgacatcaacggcctc 1629199 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||| || |||||||| || || |||||||| |||||||| Sbjct: 1674942 gagttcggagacatcgacaataatcatgtcgggattgatatcaacagtctcaactc 1674887 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 5 gccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtc 64 ||||||||||| ||||||||| |||| |||||||| |||||| || |||||| ||| Sbjct: 23226894 gccgtcgagctggacaccatcatgaaccccgagttccacgacatcagcagcaaccacgtc 23226835 Query: 65 ggcatagacatcaacagcctca 86 ||||| ||| ||||||||||| Sbjct: 23226834 ggcatcgacgccaacagcctca 23226813 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 303 cagtgctcacagaccaagcataccttggcttctc 336 |||||||||| |||||||||||| |||||||||| Sbjct: 1647420 cagtgctcactgaccaagcatacattggcttctc 1647387 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatc 49 |||||| |||||||||||||||||||| |||| ||||| || |||||| Sbjct: 10844899 cttcgctgtcgagctcgacaccatccaaaacaaggagtttggcgacatc 10844851 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||| || |||||||| ||||||||||||||| | || ||||| | |||| Sbjct: 1647712 ttcgccgtggaaatcgacaccgcccagaacaccgagttggacgatatcgatggctaccac 1647653 Query: 62 gtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||||||| |||| Sbjct: 1647652 gtcggcatcgacatcaacagcctccactc 1647624 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccga 36 |||||| || |||||||||||| ||||||||||||| Sbjct: 9284965 cttcgcggttgagctcgacaccgtccagaacaccga 9285000 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 289 ctatgacctctcaccagtgctcacagac 316 ||||||||||||| |||||||||||||| Sbjct: 1656267 ctatgacctctcaacagtgctcacagac 1656240 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcctca 86 ||||||||||||||||| || || || ||||||||||||||| Sbjct: 10839090 gacatcgacaacaaccacgttggaatcaacatcaacagcctca 10839048 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaaca 32 ||||||||||||||||||||| |||| |||| Sbjct: 1609095 ttcgccgtcgagctcgacaccttccaaaaca 1609065 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 41 ggggacatcgacaacaaccatgtcggcatagacatcaacagc 82 ||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 1744746 ggggacatcgatgacaaccatgttggcatcaacatcaacagc 1744787 Score = 44.1 bits (22), Expect = 0.42 Identities = 46/54 (85%) Strand = Plus / Minus Query: 43 ggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactcggtgga 96 ||||||| ||||||||||| |||| | |||||||| ||||| |||||||||| Sbjct: 1633575 ggacatcaacaacaaccatatcggtgttgacatcaatggcctccactcggtgga 1633522 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 actatgtgcttggttggagctttg 389 ||||||||||||| |||||||||| Sbjct: 1776509 actatgtgcttggctggagctttg 1776532 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 cgatacaggtctgggtggaataccatgg 213 |||| |||||||||||||| |||||||| Sbjct: 1624808 cgatgcaggtctgggtggactaccatgg 1624781
>dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1606_D04 Length = 92729 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Minus Query: 294 acctctcaccagtgctcacagaccaagcataccttggcttctcatcctccacaggtttaa 353 |||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 6911 acctctcaacagtgctaacagatcaagcataccttggcttctcatcctcaacaggcttaa 6852 Query: 354 gcacggggcatcactatgtgcttggttggagctttggaatgggcacccctgctccagtca 413 |||| || ||||||||||| ||||||||||| ||||| || | ||||||||| ||| Sbjct: 6851 gcacaggacatcactatgttcttggttggagttttgggctgaatattcctgctccaatca 6792 Query: 414 tagatcccaccaaactacccaagctgccttaccttggtccaagacctcaatccaaactcc 473 | || ||||| || ||||| || |||||| | ||| ||||||||||||||||||||||| Sbjct: 6791 ttgaccccacaaagctacctaaactgcctaatcttagtccaagacctcaatccaaactct 6732 Query: 474 tagagattg 482 ||||||||| Sbjct: 6731 tagagattg 6723 Score = 153 bits (77), Expect = 6e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 286 agtctatgacctctcaccagtgctcacagaccaagcataccttggcttctcatcctccac 345 ||||||| |||||||| ||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 16909 agtctataacctctcaacagtgctaacagatcaagcataccttggcttctcatcctcaac 16850 Query: 346 aggtttaagcacggggcatcactatgtgcttggttggagctttggaatgggcacccctgc 405 || |||||||| || ||||||||||| ||||||||||| ||||| || | ||||| Sbjct: 16849 gggcttaagcacaggacatcactatgttcttggttggagttttgggctgaatattcctgc 16790 Query: 406 tccagtcatagatcccaccaaactacccaagctgccttaccttggtccaagacctcaatc 465 |||| |||| || ||||| || ||||| || |||||| | ||| |||||| ||||||||| Sbjct: 16789 tccaatcattgaccccacaaagctacctaaactgcctaatcttagtccaaaacctcaatc 16730 Query: 466 caaactcctagagattg 482 ||||||| ||||||||| Sbjct: 16729 caaactcttagagattg 16713 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 321 cataccttggcttctcatcctccacaggtttaagcacggggcatcactatgtgcttggtt 380 |||| ||||| ||||||||||| ||||| |||||||| | |||||||| || ||||||| Sbjct: 41633 catatcttggtttctcatcctcaacaggcttaagcacagctcatcactacgttcttggtt 41574 Query: 381 ggagctttgg 390 |||||||||| Sbjct: 41573 ggagctttgg 41564 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 |||||||||||||||||||| || |||||||| || || |||||||| |||||||| Sbjct: 7152 gagttcggggacatcgacaataatcatgtcgggattgatatcaacagtctcaactc 7097 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacat 75 ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 41901 gagtttggggacatcgacaacaaccatgttggcattgacat 41861 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||| || |||||||| || || |||||||| |||||||| Sbjct: 17142 gagttcggagacatcgacaataatcatgtcgggattgatatcaacagtctcaactc 17087 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 41 ggggacatcgacaacaaccatgtcggcatagacatcaacagc 82 ||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 86946 ggggacatcgatgacaaccatgttggcatcaacatcaacagc 86987
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0088O14 Length = 179483 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Minus Query: 294 acctctcaccagtgctcacagaccaagcataccttggcttctcatcctccacaggtttaa 353 |||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 133366 acctctcaacagtgctaacagatcaagcataccttggcttctcatcctcaacaggcttaa 133307 Query: 354 gcacggggcatcactatgtgcttggttggagctttggaatgggcacccctgctccagtca 413 |||| || ||||||||||| ||||||||||| ||||| || | ||||||||| ||| Sbjct: 133306 gcacaggacatcactatgttcttggttggagttttgggctgaatattcctgctccaatca 133247 Query: 414 tagatcccaccaaactacccaagctgccttaccttggtccaagacctcaatccaaactcc 473 | || ||||| || ||||| || |||||| | ||| ||||||||||||||||||||||| Sbjct: 133246 ttgaccccacaaagctacctaaactgcctaatcttagtccaagacctcaatccaaactct 133187 Query: 474 tagagattg 482 ||||||||| Sbjct: 133186 tagagattg 133178 Score = 153 bits (77), Expect = 6e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 286 agtctatgacctctcaccagtgctcacagaccaagcataccttggcttctcatcctccac 345 ||||||| |||||||| ||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 143364 agtctataacctctcaacagtgctaacagatcaagcataccttggcttctcatcctcaac 143305 Query: 346 aggtttaagcacggggcatcactatgtgcttggttggagctttggaatgggcacccctgc 405 || |||||||| || ||||||||||| ||||||||||| ||||| || | ||||| Sbjct: 143304 gggcttaagcacaggacatcactatgttcttggttggagttttgggctgaatattcctgc 143245 Query: 406 tccagtcatagatcccaccaaactacccaagctgccttaccttggtccaagacctcaatc 465 |||| |||| || ||||| || ||||| || |||||| | ||| |||||| ||||||||| Sbjct: 143244 tccaatcattgaccccacaaagctacctaaactgcctaatcttagtccaaaacctcaatc 143185 Query: 466 caaactcctagagattg 482 ||||||| ||||||||| Sbjct: 143184 caaactcttagagattg 143168 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 ||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| | Sbjct: 93628 tcgccgtcgagctcgacaccatccagagcgtcgagttcagggacatcaacgccaaccacg 93569 Query: 63 tcggcatagacatcaacagcctc 85 ||||| | ||||||||| ||||| Sbjct: 93568 tcggcgtcgacatcaacggcctc 93546 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 321 cataccttggcttctcatcctccacaggtttaagcacggggcatcactatgtgcttggtt 380 |||| ||||| ||||||||||| ||||| |||||||| | |||||||| || ||||||| Sbjct: 168088 catatcttggtttctcatcctcaacaggcttaagcacagctcatcactacgttcttggtt 168029 Query: 381 ggagctttgg 390 |||||||||| Sbjct: 168028 ggagctttgg 168019 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 |||||||||||||||||||| || |||||||| || || |||||||| |||||||| Sbjct: 133607 gagttcggggacatcgacaataatcatgtcgggattgatatcaacagtctcaactc 133552 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 7 cgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtcgg 66 |||||||||||||||| |||||||| ||||||| | || |||||| |||||| |||| Sbjct: 105656 cgtcgagctcgacaccgaccagaacaacgagttccgtgatatcgacggcaaccacatcgg 105597 Query: 67 catagacatcaacagcctca 86 | | |||||||||||||||| Sbjct: 105596 cgtcgacatcaacagcctca 105577 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacat 75 ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 168356 gagtttggggacatcgacaacaaccatgttggcattgacat 168316 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||| | ||| | ||||||| | |||||| || ||||||| Sbjct: 97938 cttcgccgtcgagctcgacaccctgcagcaggacgagttccgcgacatcaacgacaacca 97879 Query: 61 tgtcggcatagacatcaacagcctc 85 |||||| | ||||||||| ||||| Sbjct: 97878 cgtcggcgtcgacatcaacggcctc 97854 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||| || |||||||| || || |||||||| |||||||| Sbjct: 143597 gagttcggagacatcgacaataatcatgtcgggattgatatcaacagtctcaactc 143542 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 303 cagtgctcacagaccaagcataccttggcttctc 336 |||||||||| |||||||||||| |||||||||| Sbjct: 116075 cagtgctcactgaccaagcatacattggcttctc 116042 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||| || |||||||| ||||||||||||||| | || ||||| | |||| Sbjct: 116367 ttcgccgtggaaatcgacaccgcccagaacaccgagttggacgatatcgatggctaccac 116308 Query: 62 gtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||||||| |||| Sbjct: 116307 gtcggcatcgacatcaacagcctccactc 116279 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 289 ctatgacctctcaccagtgctcacagac 316 ||||||||||||| |||||||||||||| Sbjct: 124922 ctatgacctctcaacagtgctcacagac 124895 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaaca 32 ||||||||||||||||||||| |||| |||| Sbjct: 77750 ttcgccgtcgagctcgacaccttccaaaaca 77720 Score = 44.1 bits (22), Expect = 0.42 Identities = 46/54 (85%) Strand = Plus / Minus Query: 43 ggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactcggtgga 96 ||||||| ||||||||||| |||| | |||||||| ||||| |||||||||| Sbjct: 102230 ggacatcaacaacaaccatatcggtgttgacatcaatggcctccactcggtgga 102177 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 cgatacaggtctgggtggaataccatgg 213 |||| |||||||||||||| |||||||| Sbjct: 93463 cgatgcaggtctgggtggactaccatgg 93436
>ref|XM_476526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2019 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 ||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 456 cttcgtcgtcgagctcgacaccatccagaacaccgacttcatggacatcaacaacaacca 515 Query: 61 tgtcggcatagacatcaacagc 82 ||||||| | |||||||||||| Sbjct: 516 tgtcggcgtcgacatcaacagc 537 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 actatgtgcttggttggagctttg 389 ||||||||||||| |||||||||| Sbjct: 806 actatgtgcttggctggagctttg 829
>ref|XM_476527.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2263 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 ||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 534 cttcgtcgtcgagctcgacaccatccagaacaccgacttcatggacatcaacaacaacca 593 Query: 61 tgtcggcatagacatcaacagc 82 ||||||| | |||||||||||| Sbjct: 594 tgtcggcgtcgacatcaacagc 615 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 actatgtgcttggttggagctttg 389 ||||||||||||| |||||||||| Sbjct: 884 actatgtgcttggctggagctttg 907
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 ||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 28378 cttcgtcgtcgagctcgacaccatccagaacaccgacttcatggacatcaacaacaacca 28437 Query: 61 tgtcggcatagacatcaacagc 82 ||||||| | |||||||||||| Sbjct: 28438 tgtcggcgtcgacatcaacagc 28459 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 actatgtgcttggttggagctttg 389 ||||||||||||| |||||||||| Sbjct: 28728 actatgtgcttggctggagctttg 28751
>dbj|AK108625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-E02, full insert sequence Length = 2259 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 ||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 534 cttcgtcgtcgagctcgacaccatccagaacaccggcttcatggacatcaacaacaacca 593 Query: 61 tgtcggcatagacatcaacagc 82 ||||||| | |||||||||||| Sbjct: 594 tgtcggcgtcgacatcaacagc 615 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 actatgtgcttggttggagctttg 389 ||||||||||||| |||||||||| Sbjct: 884 actatgtgcttggctggagctttg 907
>ref|XM_465090.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2052 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||||||||||||||||||||||||| |||| ||| | |||||| |||||||||| Sbjct: 451 ttcgccgtcgagctcgacaccatccagaaccccgacttccgcgacatcaacaacaaccac 510 Query: 62 gtcggcatagacatcaac 79 ||||| || |||||||| Sbjct: 511 gtcgggatcaacatcaac 528
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||||||||||||||||||||||||| |||| ||| | |||||| |||||||||| Sbjct: 11410579 ttcgccgtcgagctcgacaccatccagaaccccgacttccgcgacatcaacaacaaccac 11410638 Query: 62 gtcggcatagacatcaac 79 ||||| || |||||||| Sbjct: 11410639 gtcgggatcaacatcaac 11410656 Score = 48.1 bits (24), Expect = 0.027 Identities = 69/84 (82%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||| || ||||| ||||||||| ||||| | || ||| |||||| || |||||| Sbjct: 11470717 cttcgcggttgagcttgacaccatcgagaaccctgaattctccgacatcaacggcaacca 11470776 Query: 61 tgtcggcatagacatcaacagcct 84 ||||||||| |||||||| ||||| Sbjct: 11470777 tgtcggcatcgacatcaatagcct 11470800
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1654_A02 Length = 128520 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||||||||||||||||||||||||| |||| ||| | |||||| |||||||||| Sbjct: 80051 ttcgccgtcgagctcgacaccatccagaaccccgacttccgcgacatcaacaacaaccac 80110 Query: 62 gtcggcatagacatcaac 79 ||||| || |||||||| Sbjct: 80111 gtcgggatcaacatcaac 80128
>ref|XM_478825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2079 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 ||||||||||||||||||| |||| |||| |||||||||| |||||||||| |||||| Sbjct: 466 ttcgccgtcgagctcgacatcatcacgaaccccgagttcggcgacatcgacagcaaccac 525 Query: 62 gtcggcatagacatcaacagcctca 86 |||||| | ||| |||| ||||||| Sbjct: 526 gtcggcgtcgacgtcaatagcctca 550
>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1562_B11 Length = 112144 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 ||||||||||||||||||| |||| |||| |||||||||| |||||||||| |||||| Sbjct: 100226 ttcgccgtcgagctcgacatcatcacgaaccccgagttcggcgacatcgacagcaaccac 100167 Query: 62 gtcggcatagacatcaacagcctca 86 |||||| | ||| |||| ||||||| Sbjct: 100166 gtcggcgtcgacgtcaatagcctca 100142 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 5 gccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtc 64 ||||||||||| ||||||||| |||| |||||||| |||||| || |||||| ||| Sbjct: 89808 gccgtcgagctggacaccatcatgaaccccgagttccacgacatcagcagcaaccacgtc 89749 Query: 65 ggcatagacatcaacagcctca 86 ||||| ||| ||||||||||| Sbjct: 89748 ggcatcgacgccaacagcctca 89727
>ref|XM_476511.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2361 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 ||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| | Sbjct: 451 tcgccgtcgagctcgacaccatccagagcgtcgagttcagggacatcaacgccaaccacg 510 Query: 63 tcggcatagacatcaacagcctc 85 ||||| | ||||||||| ||||| Sbjct: 511 tcggcgtcgacatcaacggcctc 533 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 cgatacaggtctgggtggaataccatgg 213 |||| |||||||||||||| |||||||| Sbjct: 616 cgatgcaggtctgggtggactaccatgg 643
>dbj|AK069990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039H22, full insert sequence Length = 2361 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 ||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| | Sbjct: 451 tcgccgtcgagctcgacaccatccagagcgtcgagttcagggacatcaacgccaaccacg 510 Query: 63 tcggcatagacatcaacagcctc 85 ||||| | ||||||||| ||||| Sbjct: 511 tcggcgtcgacatcaacggcctc 533 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 cgatacaggtctgggtggaataccatgg 213 |||| |||||||||||||| |||||||| Sbjct: 616 cgatgcaggtctgggtggactaccatgg 643
>dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E09 Length = 69300 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 ||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| | Sbjct: 34126 tcgccgtcgagctcgacaccatccagagcgtcgagttcagggacatcaacgccaaccacg 34067 Query: 63 tcggcatagacatcaacagcctc 85 ||||| | ||||||||| ||||| Sbjct: 34066 tcggcgtcgacatcaacggcctc 34044 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 7 cgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtcgg 66 |||||||||||||||| |||||||| ||||||| | || |||||| |||||| |||| Sbjct: 46154 cgtcgagctcgacaccgaccagaacaacgagttccgtgatatcgacggcaaccacatcgg 46095 Query: 67 catagacatcaacagcctca 86 | | |||||||||||||||| Sbjct: 46094 cgtcgacatcaacagcctca 46075 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||| | ||| | ||||||| | |||||| || ||||||| Sbjct: 38436 cttcgccgtcgagctcgacaccctgcagcaggacgagttccgcgacatcaacgacaacca 38377 Query: 61 tgtcggcatagacatcaacagcctc 85 |||||| | ||||||||| ||||| Sbjct: 38376 cgtcggcgtcgacatcaacggcctc 38352 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 303 cagtgctcacagaccaagcataccttggcttctc 336 |||||||||| |||||||||||| |||||||||| Sbjct: 56573 cagtgctcactgaccaagcatacattggcttctc 56540 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||| || |||||||| ||||||||||||||| | || ||||| | |||| Sbjct: 56865 ttcgccgtggaaatcgacaccgcccagaacaccgagttggacgatatcgatggctaccac 56806 Query: 62 gtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||||||| |||| Sbjct: 56805 gtcggcatcgacatcaacagcctccactc 56777 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 289 ctatgacctctcaccagtgctcacagac 316 ||||||||||||| |||||||||||||| Sbjct: 65420 ctatgacctctcaacagtgctcacagac 65393 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaaca 32 ||||||||||||||||||||| |||| |||| Sbjct: 18248 ttcgccgtcgagctcgacaccttccaaaaca 18218 Score = 44.1 bits (22), Expect = 0.42 Identities = 46/54 (85%) Strand = Plus / Minus Query: 43 ggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactcggtgga 96 ||||||| ||||||||||| |||| | |||||||| ||||| |||||||||| Sbjct: 42728 ggacatcaacaacaaccatatcggtgttgacatcaatggcctccactcggtgga 42675 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 cgatacaggtctgggtggaataccatgg 213 |||| |||||||||||||| |||||||| Sbjct: 33961 cgatgcaggtctgggtggactaccatgg 33934
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||| | | |||| |||||| |||||||||| ||||||| Sbjct: 8315148 cttcgccgtcgagctcgacaccgtactgaacggggagttccaggacatcgacgacaacca 8315089 Query: 61 tgtcggcatagacatcaacagcct 84 |||||| | |||||||||||||| Sbjct: 8315088 tgtcggtgtcgacatcaacagcct 8315065 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 54 acaaccatgtcggcatagacatcaacagcctcaa 87 ||||||| |||||||| ||||||||||||||||| Sbjct: 31705015 acaaccacgtcggcatcgacatcaacagcctcaa 31705048 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 54 acaaccatgtcggcatagacatcaacagcctcaa 87 ||||||||||| |||| ||||||||||||||||| Sbjct: 31673319 acaaccatgtcagcatcgacatcaacagcctcaa 31673352 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcct 84 ||||| |||| ||||||||||||||| ||| | |||||||| Sbjct: 8312438 gacatagacagcaaccatgtcggcattgacgtgaacagcct 8312398
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||| | | |||| |||||| |||||||||| ||||||| Sbjct: 8312983 cttcgccgtcgagctcgacaccgtactgaacggggagttccaggacatcgacgacaacca 8312924 Query: 61 tgtcggcatagacatcaacagcct 84 |||||| | |||||||||||||| Sbjct: 8312923 tgtcggtgtcgacatcaacagcct 8312900 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 54 acaaccatgtcggcatagacatcaacagcctcaa 87 ||||||| |||||||| ||||||||||||||||| Sbjct: 31795531 acaaccacgtcggcatcgacatcaacagcctcaa 31795564 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 54 acaaccatgtcggcatagacatcaacagcctcaa 87 ||||||||||| |||| ||||||||||||||||| Sbjct: 31763835 acaaccatgtcagcatcgacatcaacagcctcaa 31763868 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcct 84 ||||| |||| ||||||||||||||| ||| | |||||||| Sbjct: 8310273 gacatagacagcaaccatgtcggcattgacgtgaacagcct 8310233
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||| | | |||| |||||| |||||||||| ||||||| Sbjct: 52404 cttcgccgtcgagctcgacaccgtactgaacggggagttccaggacatcgacgacaacca 52345 Query: 61 tgtcggcatagacatcaacagcct 84 |||||| | |||||||||||||| Sbjct: 52344 tgtcggtgtcgacatcaacagcct 52321 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcct 84 ||||| |||| ||||||||||||||| ||| | |||||||| Sbjct: 49694 gacatagacagcaaccatgtcggcattgacgtgaacagcct 49654
>ref|NM_196700.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0046P18.9), mRNA Length = 3579 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||||| ||| | |||||| |||||||| ||| |||||| Sbjct: 1956 cttcgccgtcgagctcgacaccatcctcaacccggagttccgggacatcaacagcaacca 2015 Query: 61 tgtcggc 67 |||||| Sbjct: 2016 cgtcggc 2022
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||||| ||| | |||||| |||||||| ||| |||||| Sbjct: 15360629 cttcgccgtcgagctcgacaccatcctcaacccggagttccgggacatcaacagcaacca 15360688 Query: 61 tgtcggc 67 |||||| Sbjct: 15360689 cgtcggc 15360695 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 ||||||| ||||||| |||||||||| |||||| | ||| |||||||||||||||| Sbjct: 15364098 gagttcgcggacatcaacaacaaccacgtcggcgtcgacgtcaacagcctcaactc 15364153
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||||| ||| | |||||| |||||||| ||| |||||| Sbjct: 77992 cttcgccgtcgagctcgacaccatcctcaacccggagttccgggacatcaacagcaacca 78051 Query: 61 tgtcggc 67 |||||| Sbjct: 78052 cgtcggc 78058 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 ||||||| ||||||| |||||||||| |||||| | ||| |||||||||||||||| Sbjct: 81461 gagttcgcggacatcaacaacaaccacgtcggcgtcgacgtcaacagcctcaactc 81516
>dbj|AP004304.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E06 Length = 159035 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 |||||||||||||||||||||| |||||| ||||||| | ||||| || ||| ||||| Sbjct: 57338 tcgccgtcgagctcgacaccatgcagaacgacgagttccgcgacattaacgacagccatg 57279 Query: 63 tcggcatagacatcaacagcctc 85 | || || ||||||||||||||| Sbjct: 57278 ttggaatcgacatcaacagcctc 57256 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccga 36 |||||| || |||||||||||| ||||||||||||| Sbjct: 47809 cttcgcggttgagctcgacaccgtccagaacaccga 47844
>dbj|AK120208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038K24, full insert sequence Length = 2290 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 |||||||||||||||||||||| |||||| ||||||| | ||||| || ||| ||||| Sbjct: 496 tcgccgtcgagctcgacaccatgcagaacgacgagttccgcgacattaacgacagccatg 555 Query: 63 tcggcatagacatcaacagcctc 85 | || || ||||||||||||||| Sbjct: 556 ttggaatcgacatcaacagcctc 578
>dbj|AK105860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H11, full insert sequence Length = 2262 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||||| ||| | |||||| |||||||| ||| |||||| Sbjct: 496 cttcgccgtcgagctcgacaccatcctcaacccggagttccgggacatcaacagcaacca 555 Query: 61 tgtcggc 67 |||||| Sbjct: 556 cgtcggc 562
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||||| ||| | |||||| |||||||| ||| |||||| Sbjct: 15368870 cttcgccgtcgagctcgacaccatcctcaacccggagttccgggacatcaacagcaacca 15368929 Query: 61 tgtcggc 67 |||||| Sbjct: 15368930 cgtcggc 15368936 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 ||||||| ||||||| |||||||||| |||||| | ||| |||||||||||||||| Sbjct: 15372339 gagttcgcggacatcaacaacaaccacgtcggcgtcgacgtcaacagcctcaactc 15372394
>ref|NM_186226.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1911 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 321 cataccttggcttctcatcctccacaggtttaagcacggggcatcactatgtgcttggtt 380 |||| ||||| ||||||||||| ||||| |||||||| | |||||||| || ||||||| Sbjct: 722 catatcttggtttctcatcctcaacaggcttaagcacagctcatcactacgttcttggtt 781 Query: 381 ggagctttgg 390 |||||||||| Sbjct: 782 ggagctttgg 791 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacat 75 ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 454 gagtttggggacatcgacaacaaccatgttggcattgacat 494
>ref|NM_196701.1| Oryza sativa (japonica cultivar-group) putative serine/threonine-specific kinase like protein (OSJNBa0046P18.10), mRNA Length = 2844 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 ||||||| ||||||| |||||||||| |||||| | ||| |||||||||||||||| Sbjct: 469 gagttcgcggacatcaacaacaaccacgtcggcgtcgacgtcaacagcctcaactc 524
>ref|XM_476515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 7 cgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtcgg 66 |||||||||||||||| |||||||| ||||||| | || |||||| |||||| |||| Sbjct: 477 cgtcgagctcgacaccgaccagaacaacgagttccgtgatatcgacggcaaccacatcgg 536 Query: 67 catagacatcaacagcctca 86 | | |||||||||||||||| Sbjct: 537 cgtcgacatcaacagcctca 556
>dbj|AK071359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J23, full insert sequence Length = 2374 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 35 gagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactc 90 ||||||| ||||||| |||||||||| |||||| | ||| |||||||||||||||| Sbjct: 590 gagttcgcggacatcaacaacaaccacgtcggcgtcgacgtcaacagcctcaactc 645
>dbj|AK069319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018L01, full insert sequence Length = 2293 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 7 cgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtcgg 66 |||||||||||||||| |||||||| ||||||| | || |||||| |||||| |||| Sbjct: 468 cgtcgagctcgacaccgaccagaacaacgagttccgtgatatcgacggcaaccacatcgg 527 Query: 67 catagacatcaacagcctca 86 | | |||||||||||||||| Sbjct: 528 cgtcgacatcaacagcctca 547
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 ||||||||||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 7966577 ttcgccgtcgagctcgacaccatccgcaaccaggagttcggggacatcaacggcaaccac 7966518 Query: 62 gtcggc 67 |||||| Sbjct: 7966517 gtcggc 7966512 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cgacaccatccagaacaccg 35 |||||||||||||||||||| Sbjct: 14610050 cgacaccatccagaacaccg 14610069
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 ||||||||||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 74095 ttcgccgtcgagctcgacaccatccgcaaccaggagttcggggacatcaacggcaaccac 74036 Query: 62 gtcggc 67 |||||| Sbjct: 74035 gtcggc 74030
>ref|XM_476512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2236 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||| | ||| | ||||||| | |||||| || ||||||| Sbjct: 464 cttcgccgtcgagctcgacaccctgcagcaggacgagttccgcgacatcaacgacaacca 523 Query: 61 tgtcggcatagacatcaacagcctc 85 |||||| | ||||||||| ||||| Sbjct: 524 cgtcggcgtcgacatcaacggcctc 548
>dbj|AK068307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136I11, full insert sequence Length = 2237 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||| | ||| | ||||||| | |||||| || ||||||| Sbjct: 464 cttcgccgtcgagctcgacaccctgcagcaggacgagttccgcgacatcaacgacaacca 523 Query: 61 tgtcggcatagacatcaacagcctc 85 |||||| | ||||||||| ||||| Sbjct: 524 cgtcggcgtcgacatcaacggcctc 548
>ref|NM_184965.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2121 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 54 acaaccatgtcggcatagacatcaacagcctcaa 87 ||||||| |||||||| ||||||||||||||||| Sbjct: 572 acaaccacgtcggcatcgacatcaacagcctcaa 605
>ref|XM_478823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2183 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 5 gccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtc 64 ||||||||||| ||||||||| |||| |||||||| |||||| || |||||| ||| Sbjct: 496 gccgtcgagctggacaccatcatgaaccccgagttccacgacatcagcagcaaccacgtc 555 Query: 65 ggcatagacatcaacagcctca 86 ||||| ||| ||||||||||| Sbjct: 556 ggcatcgacgccaacagcctca 577
>ref|XM_476518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2283 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 303 cagtgctcacagaccaagcataccttggcttctc 336 |||||||||| |||||||||||| |||||||||| Sbjct: 977 cagtgctcactgaccaagcatacattggcttctc 1010 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||| || |||||||| ||||||||||||||| | || ||||| | |||| Sbjct: 685 ttcgccgtggaaatcgacaccgcccagaacaccgagttggacgatatcgatggctaccac 744 Query: 62 gtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||||||| |||| Sbjct: 745 gtcggcatcgacatcaacagcctccactc 773
>ref|XM_473281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2040 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||| | ||| | |||||| |||||| ||| |||||| Sbjct: 423 cttcgccgtcgagctcgacaccatgctcaacccggagttccaggacatgaacagcaacca 482 Query: 61 tgtcggcatagacatcaacagc 82 ||||| | |||||||||||| Sbjct: 483 catcggcgtcgacatcaacagc 504
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 54 acaaccatgtcggcatagacatcaacagcctcaa 87 ||||||||||| |||| ||||||||||||||||| Sbjct: 7348 acaaccatgtcagcatcgacatcaacagcctcaa 7315
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 54 acaaccatgtcggcatagacatcaacagcctcaa 87 ||||||| |||||||| ||||||||||||||||| Sbjct: 30241 acaaccacgtcggcatcgacatcaacagcctcaa 30274
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||| | ||| | |||||| |||||| ||| |||||| Sbjct: 87212 cttcgccgtcgagctcgacaccatgctcaacccggagttccaggacatgaacagcaacca 87271 Query: 61 tgtcggcatagacatcaacagc 82 ||||| | |||||||||||| Sbjct: 87272 catcggcgtcgacatcaacagc 87293 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 55 caaccatgtcggcatagacatcaacagcctcaactc 90 |||||||||||| || ||| ||||| |||||||||| Sbjct: 84788 caaccatgtcgggatcgacgtcaacggcctcaactc 84753
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||| | ||| | |||||| |||||| ||| |||||| Sbjct: 26550326 cttcgccgtcgagctcgacaccatgctcaacccggagttccaggacatgaacagcaacca 26550385 Query: 61 tgtcggcatagacatcaacagc 82 ||||| | |||||||||||| Sbjct: 26550386 catcggcgtcgacatcaacagc 26550407 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 55 caaccatgtcggcatagacatcaacagcctcaactc 90 |||||||||||| || ||| ||||| |||||||||| Sbjct: 26547902 caaccatgtcgggatcgacgtcaacggcctcaactc 26547867
>dbj|AK120949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038D05, full insert sequence Length = 2125 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 54 acaaccatgtcggcatagacatcaacagcctcaa 87 ||||||| |||||||| ||||||||||||||||| Sbjct: 465 acaaccacgtcggcatcgacatcaacagcctcaa 498
>dbj|AK110940.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-G10, full insert sequence Length = 1488 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 5 gccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtc 64 ||||||||||| ||||||||| |||| |||||||| |||||| || |||||| ||| Sbjct: 631 gccgtcgagctggacaccatcatgaaccccgagttccacgacatcagcagcaaccacgtc 690 Query: 65 ggcatagacatcaacagcctca 86 ||||| ||| ||||||||||| Sbjct: 691 ggcatcgacgccaacagcctca 712
>dbj|AK107678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-A04, full insert sequence Length = 2366 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||| | ||| | |||||| |||||| ||| |||||| Sbjct: 1809 cttcgccgtcgagctcgacaccatgctcaacccggagttccaggacatgaacagcaacca 1750 Query: 61 tgtcggcatagacatcaacagc 82 ||||| | |||||||||||| Sbjct: 1749 catcggcgtcgacatcaacagc 1728
>dbj|AK102285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I06, full insert sequence Length = 2454 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||||||||||||||||||||| | ||| | |||||| |||||| ||| |||||| Sbjct: 638 cttcgccgtcgagctcgacaccatgctcaacccggagttccaggacatgaacagcaacca 697 Query: 61 tgtcggcatagacatcaacagc 82 ||||| | |||||||||||| Sbjct: 698 catcggcgtcgacatcaacagc 719
>dbj|AK101924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071P06, full insert sequence Length = 2181 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 5 gccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatgtc 64 ||||||||||| ||||||||| |||| |||||||| |||||| || |||||| ||| Sbjct: 494 gccgtcgagctggacaccatcatgaaccccgagttccacgacatcagcagcaaccacgtc 553 Query: 65 ggcatagacatcaacagcctca 86 ||||| ||| ||||||||||| Sbjct: 554 ggcatcgacgccaacagcctca 575
>dbj|AK068045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135M14, full insert sequence Length = 2658 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 303 cagtgctcacagaccaagcataccttggcttctc 336 |||||||||| |||||||||||| |||||||||| Sbjct: 1805 cagtgctcactgaccaagcatacattggcttctc 1772 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||| || |||||||| ||||||||||||||| | || ||||| | |||| Sbjct: 2097 ttcgccgtggaaatcgacaccgcccagaacaccgagttggacgatatcgatggctaccac 2038 Query: 62 gtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||||||| |||| Sbjct: 2037 gtcggcatcgacatcaacagcctccactc 2009
>dbj|AK067638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109O13, full insert sequence Length = 2275 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 303 cagtgctcacagaccaagcataccttggcttctc 336 |||||||||| |||||||||||| |||||||||| Sbjct: 799 cagtgctcactgaccaagcatacattggcttctc 832 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 2 ttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccat 61 |||||||| || |||||||| ||||||||||||||| | || ||||| | |||| Sbjct: 507 ttcgccgtggaaatcgacaccgcccagaacaccgagttggacgatatcgatggctaccac 566 Query: 62 gtcggcatagacatcaacagcctcaactc 90 |||||||| ||||||||||||||| |||| Sbjct: 567 gtcggcatcgacatcaacagcctccactc 595
>dbj|AK066399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063L14, full insert sequence Length = 3210 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 303 cagtgctcacagaccaagcataccttggcttctc 336 |||||||||| |||||||||||| |||||||||| Sbjct: 799 cagtgctcactgaccaagcatacattggcttctc 832 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 57 accatgtcggcatagacatcaacagcctcaactc 90 |||| |||||||| ||||||||||||||| |||| Sbjct: 562 accacgtcggcatcgacatcaacagcctccactc 595
>ref|XM_477491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatc 49 |||||| |||||||||||||||||||| |||| ||||| || |||||| Sbjct: 417 cttcgctgtcgagctcgacaccatccaaaacaaggagtttggcgacatc 465
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0018O23 Length = 142143 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatc 49 |||||| |||||||||||||||||||| |||| ||||| || |||||| Sbjct: 55658 cttcgctgtcgagctcgacaccatccaaaacaaggagtttggcgacatc 55610 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcctca 86 ||||||||||||||||| || || || ||||||||||||||| Sbjct: 49849 gacatcgacaacaaccacgttggaatcaacatcaacagcctca 49807
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatc 49 |||||| |||||||||||||||||||| |||| ||||| || |||||| Sbjct: 21274 cttcgctgtcgagctcgacaccatccaaaacaaggagtttggcgacatc 21226 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcctca 86 ||||||||||||||||| || || || ||||||||||||||| Sbjct: 15465 gacatcgacaacaaccacgttggaatcaacatcaacagcctca 15423
>ref|XM_465097.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 48.1 bits (24), Expect = 0.027 Identities = 69/84 (82%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||| || ||||| ||||||||| ||||| | || ||| |||||| || |||||| Sbjct: 459 cttcgcggttgagcttgacaccatcgagaaccctgaattctccgacatcaacggcaacca 518 Query: 61 tgtcggcatagacatcaacagcct 84 ||||||||| |||||||| ||||| Sbjct: 519 tgtcggcatcgacatcaatagcct 542
>ref|XM_476520.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2034 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 289 ctatgacctctcaccagtgctcacagac 316 ||||||||||||| |||||||||||||| Sbjct: 684 ctatgacctctcaacagtgctcacagac 711
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 48.1 bits (24), Expect = 0.027 Identities = 69/84 (82%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaacca 60 |||||| || ||||| ||||||||| ||||| | || ||| |||||| || |||||| Sbjct: 53209 cttcgcggttgagcttgacaccatcgagaaccctgaattctccgacatcaacggcaacca 53268 Query: 61 tgtcggcatagacatcaacagcct 84 ||||||||| |||||||| ||||| Sbjct: 53269 tgtcggcatcgacatcaatagcct 53292
>ref|XM_477490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcctca 86 ||||||||||||||||| || || || ||||||||||||||| Sbjct: 460 gacatcgacaacaaccacgttggaatcaacatcaacagcctca 502
>ref|XM_476507.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2022 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2 ttcgccgtcgagctcgacaccatccagaaca 32 ||||||||||||||||||||| |||| |||| Sbjct: 400 ttcgccgtcgagctcgacaccttccaaaaca 430
>ref|NM_125425.1| Arabidopsis thaliana kinase AT5G60320 mRNA, complete cds Length = 2028 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 47 atcgacaacaaccatgtcggcatagacatcaacagcct 84 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 466 atcgacaagaatcatgtcggtatagacatcaaaagcct 503
>ref|XM_476523.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2013 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 41 ggggacatcgacaacaaccatgtcggcatagacatcaacagc 82 ||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 394 ggggacatcgatgacaaccatgttggcatcaacatcaacagc 435
>ref|XM_476514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2016 Score = 44.1 bits (22), Expect = 0.42 Identities = 46/54 (85%) Strand = Plus / Plus Query: 43 ggacatcgacaacaaccatgtcggcatagacatcaacagcctcaactcggtgga 96 ||||||| ||||||||||| |||| | |||||||| ||||| |||||||||| Sbjct: 462 ggacatcaacaacaaccatatcggtgttgacatcaatggcctccactcggtgga 515
>gb|AF224263.1|AF224263 Heterodontus francisci Evx2 (evx2), HoxD13 (HoxD13), HoxD12 (HoxD12), HoxD11 (HoxD11), HoxD10 (HoxD10), HoxD9 (HoxD9), HoxD8 (HoxD8), and HoxD5 (HoxD5) genes, complete cds Length = 98786 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 gagctcgacaccatccagaaca 32 |||||||||||||||||||||| Sbjct: 9156 gagctcgacaccatccagaaca 9177
>dbj|AB015471.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9B18 Length = 10085 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 47 atcgacaacaaccatgtcggcatagacatcaacagcct 84 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 1858 atcgacaagaatcatgtcggtatagacatcaaaagcct 1895
>emb|CR932808.1| Mus musculus chromosome 2, clone RPCI-21-370D12 strain 129/Sv, complete sequence Length = 163435 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 383 agctttggaatgggcacccctgctccagt 411 |||||||| |||| ||||||||||||||| Sbjct: 94702 agctttggcatggacacccctgctccagt 94730 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 383 agctttggaatgggcacccctgctccagt 411 |||||||| |||| ||||||||||||||| Sbjct: 94646 agctttggcatggacacccctgctccagt 94674
>gb|AC106714.7| Homo sapiens X BAC RP11-399D20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172543 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 ccaaactacccaagctgcctt 443 ||||||||||||||||||||| Sbjct: 26624 ccaaactacccaagctgcctt 26644
>gb|AC112918.3| Homo sapiens X BAC RP11-370L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167503 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 ccaaactacccaagctgcctt 443 ||||||||||||||||||||| Sbjct: 150374 ccaaactacccaagctgcctt 150394
>dbj|AK107444.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-B09, full insert sequence Length = 2141 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcct 84 ||||| |||| ||||||||||||||| ||| | |||||||| Sbjct: 465 gacatagacagcaaccatgtcggcattgacgtgaacagcct 505
>dbj|AK100114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006K11, full insert sequence Length = 2883 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 44 gacatcgacaacaaccatgtcggcatagacatcaacagcct 84 ||||| |||| ||||||||||||||| ||| | |||||||| Sbjct: 1905 gacatagacagcaaccatgtcggcattgacgtgaacagcct 1865
>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete sequence Length = 180252 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 383 agctttggaatgggcacccctgctccagt 411 |||||||| |||| ||||||||||||||| Sbjct: 27247 agctttggcatggacacccctgctccagt 27219 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 383 agctttggaatgggcacccctgctccagt 411 |||||||| |||| ||||||||||||||| Sbjct: 27191 agctttggcatggacacccctgctccagt 27163
>gb|BC089887.1| Rattus norvegicus, mRNA (cDNA clone MGC:109057 IMAGE:7371502), complete cds Length = 3140 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cagtgctcacagaccaagca 322 |||||||||||||||||||| Sbjct: 1179 cagtgctcacagaccaagca 1198
>ref|XM_450514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccat 24 |||||||||||| ||||||||||| Sbjct: 1080 cttcgccgtcgacctcgacaccat 1103
>ref|XM_450381.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2007 Score = 40.1 bits (20), Expect = 6.5 Identities = 62/76 (81%) Strand = Plus / Plus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 |||| ||||||||||||||| | ||||||| ||||| ||||| ||| |||| ||||| Sbjct: 413 tcgcagtcgagctcgacacctttcagaacaatgagtttggggatatcagtaacagccatg 472 Query: 63 tcggcatagacatcaa 78 | ||||| || ||||| Sbjct: 473 ttggcattgatatcaa 488
>ref|XM_473280.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2022 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 55 caaccatgtcggcatagacatcaacagcctcaactc 90 |||||||||||| || ||| ||||| |||||||||| Sbjct: 483 caaccatgtcgggatcgacgtcaacggcctcaactc 518
>gb|AC113901.7| Rattus norvegicus 2 BAC CH230-328F5 (Children's Hospital Oakland Research Institute) complete sequence Length = 157435 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cagtgctcacagaccaagca 322 |||||||||||||||||||| Sbjct: 8136 cagtgctcacagaccaagca 8155
>gb|AC113957.8| Mus musculus chromosome 15, clone RP23-452M1, complete sequence Length = 168824 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tctatgacctctcaccagtg 307 |||||||||||||||||||| Sbjct: 155563 tctatgacctctcaccagtg 155582
>gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complete sequence Length = 177050 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 acctctcaccagtgctcacagaccaagc 321 ||||||||| ||||||||||| |||||| Sbjct: 74499 acctctcactagtgctcacagcccaagc 74526
>gb|AY321329.1| Rattus norvegicus Ac2-061 mRNA, complete cds Length = 2294 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cagtgctcacagaccaagca 322 |||||||||||||||||||| Sbjct: 563 cagtgctcacagaccaagca 582
>gb|AY310142.1| Rattus norvegicus Ac1133 mRNA, complete cds Length = 2299 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cagtgctcacagaccaagca 322 |||||||||||||||||||| Sbjct: 568 cagtgctcacagaccaagca 587
>ref|NM_001034912.1| Rattus norvegicus hypothetical protein LOC619558 (LOC619558), mRNA Length = 3140 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cagtgctcacagaccaagca 322 |||||||||||||||||||| Sbjct: 1179 cagtgctcacagaccaagca 1198
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 34 cgagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctc 85 ||||||||| |||||| | ||||||| |||||| | ||| ||||||||||| Sbjct: 23752803 cgagttcggcgacatcaatgacaaccacgtcggcgtcgacctcaacagcctc 23752752
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccat 24 |||||||||||| ||||||||||| Sbjct: 9407576 cttcgccgtcgacctcgacaccat 9407599 Score = 40.1 bits (20), Expect = 6.5 Identities = 62/76 (81%) Strand = Plus / Minus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 |||| ||||||||||||||| | ||||||| ||||| ||||| ||| |||| ||||| Sbjct: 5067973 tcgcagtcgagctcgacacctttcagaacaatgagtttggggatatcagtaacagccatg 5067914 Query: 63 tcggcatagacatcaa 78 | ||||| || ||||| Sbjct: 5067913 ttggcattgatatcaa 5067898
>gb|AC090523.1|AC090523 Caenorhabditis briggsae cosmid CB015N01, complete sequence Length = 98319 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcgacaccatccagaacac 33 |||||||||||||||||||| Sbjct: 1377 ctcgacaccatccagaacac 1358
>emb|BX465202.4| Zebrafish DNA sequence from clone CH211-191G24 in linkage group 2, complete sequence Length = 170771 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atgggcacccctgctccagt 411 |||||||||||||||||||| Sbjct: 88113 atgggcacccctgctccagt 88094
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 40.1 bits (20), Expect = 6.5 Identities = 62/76 (81%) Strand = Plus / Minus Query: 3 tcgccgtcgagctcgacaccatccagaacaccgagttcggggacatcgacaacaaccatg 62 |||| ||||||||||||||| | ||||||| ||||| ||||| ||| |||| ||||| Sbjct: 70090 tcgcagtcgagctcgacacctttcagaacaatgagtttggggatatcagtaacagccatg 70031 Query: 63 tcggcatagacatcaa 78 | ||||| || ||||| Sbjct: 70030 ttggcattgatatcaa 70015
>dbj|AP005914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0027A16 Length = 129953 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cgacaccatccagaacaccg 35 |||||||||||||||||||| Sbjct: 64311 cgacaccatccagaacaccg 64330
>dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0024J13 Length = 127614 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 cttcgccgtcgagctcgacaccat 24 |||||||||||| ||||||||||| Sbjct: 90990 cttcgccgtcgacctcgacaccat 91013
>emb|AL928674.5| Zebrafish DNA sequence from clone CH211-10E2, complete sequence Length = 205118 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atgggcacccctgctccagt 411 |||||||||||||||||||| Sbjct: 124977 atgggcacccctgctccagt 124958
>dbj|AK105289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-F02, full insert sequence Length = 2156 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 55 caaccatgtcggcatagacatcaacagcctcaactc 90 |||||||||||| || ||| ||||| |||||||||| Sbjct: 443 caaccatgtcgggatcgacgtcaacggcctcaactc 478
>gb|AF068135.1|AF068135 Glycine max receptor-like protein kinase gene, partial cds Length = 828 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ttcggggacatcgacaacaaccatgtcggcat 69 ||||| |||||| || |||||||||||||||| Sbjct: 334 ttcggagacatcaacgacaaccatgtcggcat 365
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 34 cgagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctc 85 ||||||||| |||||| | ||||||| |||||| | ||| ||||||||||| Sbjct: 23681002 cgagttcggcgacatcaatgacaaccacgtcggcgtcgacctcaacagcctc 23680951
>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128795 Score = 40.1 bits (20), Expect = 6.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 34 cgagttcggggacatcgacaacaaccatgtcggcatagacatcaacagcctc 85 ||||||||| |||||| | ||||||| |||||| | ||| ||||||||||| Sbjct: 2807 cgagttcggcgacatcaatgacaaccacgtcggcgtcgacctcaacagcctc 2858
>emb|AL772338.9| Mouse DNA sequence from clone RP23-47A6 on chromosome 4, complete sequence Length = 235366 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 agcagggaggatgacggcat 153 |||||||||||||||||||| Sbjct: 99317 agcagggaggatgacggcat 99336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,389,473 Number of Sequences: 3902068 Number of extensions: 3389473 Number of successful extensions: 60415 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59653 Number of HSP's gapped (non-prelim): 751 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
