Clone Name | bah63l23 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 234 bits (118), Expect = 3e-58 Identities = 157/170 (92%) Strand = Plus / Minus Query: 161 caggtattcgtcactgatttgtggactgaacatacaccatggcctttcaaccaacttccc 220 |||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| ||| Sbjct: 15298323 caggtattcgtcactgatttatggactgaccataccccatggccattcaaccaactaccc 15298264 Query: 221 agaagctatagtttcttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15298263 aggagctacagtttcttggtgaaacatggacccttgtggaagatgacatactatggtact 15298204 Query: 281 gcgccacgagtaattcaccagccacattttgctgcaacagcaacattcat 330 || ||||||||| |||| ||||||||||||||||||||| | |||||||| Sbjct: 15298203 gcaccacgagtagttcatcagccacattttgctgcaacatcgacattcat 15298154 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 25 ggttgaggaggaaggcgtggcgcgggccgaggcgcccaagaaggtgctgatcctcatgag 84 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 15300490 ggttgaggaggaaggggtggcgcgggccgaggcgccgaagaaggtgctgatcctgatgag 15300431 Query: 85 tgacacgggcggcggccatcgcgcgtccgccgaggccatcaaggccgcttttgcccagga 144 |||||||||||||| || ||||| |||||||||||||||||||| || || |||||| Sbjct: 15300430 cgacacgggcggcgggcaccgcgcttccgccgaggccatcaaggcggcgttcatccagga 15300371 Query: 145 gtatggcgacgactaccaggt 165 || ||||||||||||||||| Sbjct: 15300370 gttcggcgacgactaccaggt 15300350 Score = 165 bits (83), Expect = 2e-37 Identities = 119/131 (90%) Strand = Plus / Minus Query: 498 ggtttcacaagcttgtgactagatgttactgtccatcagccgaggtgacaaagagagcac 557 |||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||| Sbjct: 15296563 ggtttcacaagcttgttactagatgttactgtccatcagctgaagtgtcaaagagagcac 15296504 Query: 558 taaaagctggactgaaaccttcacaaattaaagtctatggcctccctgtacgcccatctt 617 ||||||||||| || | || || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 15296503 taaaagctggattgcagccctcgcaaattaaagtctatggcctcccagtacgtccatctt 15296444 Query: 618 ttgccaaacct 628 ||| ||||||| Sbjct: 15296443 ttgtcaaacct 15296433 Score = 163 bits (82), Expect = 9e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 335 agagaggttgccaaaggtctgatgaagtaccaaccagatgtgattatcagtgtacatcct 394 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 15296841 agagaggttgcaaaaggtctcatgaaataccaaccagatgtaattatcagtgtccatcct 15296782 Query: 395 ttaatgcaacatgtcccccttcgagttctacggtccagaggtttattggataagattccg 454 |||||||| |||||||| || ||| | ||| |||| | ||||||| |||||||||||||| Sbjct: 15296781 ttaatgcagcatgtcccactccgaatcctaaggtcaaaaggtttactggataagattccg 15296722 Query: 455 ttcacaactgttatcaccgacttgagcacttgtcacccaacttggt 500 |||||||| ||| |||| || |||| |||||||||||||| |||| Sbjct: 15296721 ttcacaacagttgtcacagatctgagtacttgtcacccaacatggt 15296676
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 234 bits (118), Expect = 3e-58 Identities = 157/170 (92%) Strand = Plus / Minus Query: 161 caggtattcgtcactgatttgtggactgaacatacaccatggcctttcaaccaacttccc 220 |||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| ||| Sbjct: 77512 caggtattcgtcactgatttatggactgaccataccccatggccattcaaccaactaccc 77453 Query: 221 agaagctatagtttcttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77452 aggagctacagtttcttggtgaaacatggacccttgtggaagatgacatactatggtact 77393 Query: 281 gcgccacgagtaattcaccagccacattttgctgcaacagcaacattcat 330 || ||||||||| |||| ||||||||||||||||||||| | |||||||| Sbjct: 77392 gcaccacgagtagttcatcagccacattttgctgcaacatcgacattcat 77343 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 25 ggttgaggaggaaggcgtggcgcgggccgaggcgcccaagaaggtgctgatcctcatgag 84 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 79679 ggttgaggaggaaggggtggcgcgggccgaggcgccgaagaaggtgctgatcctgatgag 79620 Query: 85 tgacacgggcggcggccatcgcgcgtccgccgaggccatcaaggccgcttttgcccagga 144 |||||||||||||| || ||||| |||||||||||||||||||| || || |||||| Sbjct: 79619 cgacacgggcggcgggcaccgcgcttccgccgaggccatcaaggcggcgttcatccagga 79560 Query: 145 gtatggcgacgactaccaggt 165 || ||||||||||||||||| Sbjct: 79559 gttcggcgacgactaccaggt 79539 Score = 165 bits (83), Expect = 2e-37 Identities = 119/131 (90%) Strand = Plus / Minus Query: 498 ggtttcacaagcttgtgactagatgttactgtccatcagccgaggtgacaaagagagcac 557 |||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||| Sbjct: 75752 ggtttcacaagcttgttactagatgttactgtccatcagctgaagtgtcaaagagagcac 75693 Query: 558 taaaagctggactgaaaccttcacaaattaaagtctatggcctccctgtacgcccatctt 617 ||||||||||| || | || || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 75692 taaaagctggattgcagccctcgcaaattaaagtctatggcctcccagtacgtccatctt 75633 Query: 618 ttgccaaacct 628 ||| ||||||| Sbjct: 75632 ttgtcaaacct 75622 Score = 163 bits (82), Expect = 9e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 335 agagaggttgccaaaggtctgatgaagtaccaaccagatgtgattatcagtgtacatcct 394 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 76030 agagaggttgcaaaaggtctcatgaaataccaaccagatgtaattatcagtgtccatcct 75971 Query: 395 ttaatgcaacatgtcccccttcgagttctacggtccagaggtttattggataagattccg 454 |||||||| |||||||| || ||| | ||| |||| | ||||||| |||||||||||||| Sbjct: 75970 ttaatgcagcatgtcccactccgaatcctaaggtcaaaaggtttactggataagattccg 75911 Query: 455 ttcacaactgttatcaccgacttgagcacttgtcacccaacttggt 500 |||||||| ||| |||| || |||| |||||||||||||| |||| Sbjct: 75910 ttcacaacagttgtcacagatctgagtacttgtcacccaacatggt 75865
>dbj|AB047475.1| Glycine max gmMGD A mRNA for MGDG synthase type A, complete cds Length = 1985 Score = 145 bits (73), Expect = 2e-31 Identities = 193/233 (82%) Strand = Plus / Plus Query: 161 caggtattcgtcactgatttgtggactgaacatacaccatggcctttcaaccaacttccc 220 ||||| ||||| |||||||||||| |||| || || || ||||| ||||||||||||||| Sbjct: 668 caggttttcgttactgatttgtgggctgatcacacgccttggccattcaaccaacttccc 727 Query: 221 agaagctatagtttcttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 || ||||||||||| ||||||||||||| || |||||||||||||| |||||||| || Sbjct: 728 aggagctatagttttctggtgaaacatgggccgttgtggaagatgacctactatggaact 787 Query: 281 gcgccacgagtaattcaccagccacattttgctgcaacagcaacattcatcgcgagagag 340 || ||||| ||| | || ||| | ||||||||||||| | ||| ||||| || | ||| Sbjct: 788 gccccacgtgtagtgcatcagtctaattttgctgcaactggaactttcatagctcgcgag 847 Query: 341 gttgccaaaggtctgatgaagtaccaaccagatgtgattatcagtgtacatcc 393 ||||||||||| || ||||| || || |||||| | || |||||||| ||||| Sbjct: 848 gttgccaaaggcctaatgaaatatcagccagatataataatcagtgtgcatcc 900
>gb|U62622.1|CSU62622 Cucumis sativus monogalactosyldiacylglycerol synthase mRNA, complete cds Length = 2142 Score = 105 bits (53), Expect = 2e-19 Identities = 197/245 (80%) Strand = Plus / Plus Query: 173 actgatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagt 232 |||||||||||||| || || || || ||||||||||| ||| | || |||||||| | Sbjct: 833 actgatttgtggacggaccacactccttggcctttcaatcaattaccaagaagctacaac 892 Query: 233 ttcttggtgaaacatggacccttgtggaagatgacatactatggtacagcgccacgagta 292 ||||||||||||||||| | |||||||||||||| ||||||| || || ||| ||| Sbjct: 893 ttcttggtgaaacatggcacattgtggaagatgacttactatgtgactgctccaaaagtg 952 Query: 293 attcaccagccacattttgctgcaacagcaacattcatcgcgagagaggttgccaaaggt 352 ||||| ||| || ||||||||||||| |||||||||| || |||| || || ||||| Sbjct: 953 attcatcagtcaaattttgctgcaacttcaacattcatagctcgagaagtagcaaaagga 1012 Query: 353 ctgatgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtcccc 412 |||||||| || |||||| | ||||||||||| |||||| | ||||| ||||| ||| Sbjct: 1013 ctgatgaaatataggccagatattattatcagtgttcatcctctgatgcagcatgttccc 1072 Query: 413 cttcg 417 |||| Sbjct: 1073 attcg 1077 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 476 ttgagcacttgtcacccaacttggtttcacaagcttgtgactagatgttactgtccatc 534 |||||||| || |||||||| ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 1136 ttgagcacctgccacccaacatggtttcacaagcttgttacaagatgctactgcccatc 1194
>dbj|AB047476.1| Nicotiana tabacum ntMGD A mRNA for MGDG synthase type A, complete cds Length = 2055 Score = 97.6 bits (49), Expect = 4e-17 Identities = 196/245 (80%) Strand = Plus / Plus Query: 173 actgatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagt 232 |||||||||||||| |||||||||||||||||||| |||||||| || | || || | Sbjct: 713 actgatttgtggacagaacatacaccatggccttttaaccaactaccacggagttacaac 772 Query: 233 ttcttggtgaaacatggacccttgtggaagatgacatactatggtacagcgccacgagta 292 ||||| ||||||||||| | |||||| |||||||| |||| ||| || || || || Sbjct: 773 ttcttagtgaaacatggctctctgtggagaatgacatattatgctactgctcctcgttta 832 Query: 293 attcaccagccacattttgctgcaacagcaacattcatcgcgagagaggttgccaaaggt 352 |||| ||| | |||||||||| ||| | || || || || | ||||||||||||||| Sbjct: 833 gttcatcagaccaattttgctgctacatctacttttattgctcgcgaggttgccaaaggt 892 Query: 353 ctgatgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtcccc 412 | ||||| || ||||| ||| | |||||||||||||||||| ||||||| ||||| || Sbjct: 893 ttaatgaaatatcaacctgatattattatcagtgtacatcctctaatgcagcatgtacct 952 Query: 413 cttcg 417 ||||| Sbjct: 953 cttcg 957 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 458 acaactgttatcaccgacttgagcacttgtcacccaacttggtttcacaagcttgtgact 517 ||||||||||| || || || ||||||||||| || || ||||||||||| || || ||| Sbjct: 998 acaactgttataacagatttaagcacttgtcatcctacatggtttcacaaactcgttact 1057 Query: 518 agatgttactgtccatcag 536 || || ||||||||||||| Sbjct: 1058 aggtgctactgtccatcag 1076
>ref|NM_119327.2| Arabidopsis thaliana MGD1 (MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1); 1,2-diacylglycerol 3-beta-galactosyltransferase AT4G31780 (MGD1) transcript variant AT4G31780.2 mRNA, complete cds Length = 1998 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 454 gttcacaactgttatcaccgacttgagcacttgtcacccaacttggtttcacaagcttgt 513 |||||| || ||||| || ||||| |||||||| || || || |||||||| |||||||| Sbjct: 1039 gttcaccacggttattacagacttaagcacttgccatcctacatggtttcataagcttgt 1098 Query: 514 gactagatgttactgtccatcagccgaggtgacaaagagagcactaaaagctggactgaa 573 ||| |||||||| || |||||| | || ||| |||| || || | |||||| ||||| | Sbjct: 1099 gacaagatgttattgcccatcaacagaagtggcaaaaagggctcaaaaagcaggacttga 1158 Query: 574 accttcacaaattaaagtctatggcctccctgt 606 | | |||||||| ||||| |||||||||||||| Sbjct: 1159 aacatcacaaatcaaagtttatggcctccctgt 1191 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 761 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 820 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 821 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 941 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 1000 Query: 416 cg 417 || Sbjct: 1001 cg 1002
>ref|NM_179151.1| Arabidopsis thaliana MGD1 (MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1); 1,2-diacylglycerol 3-beta-galactosyltransferase/ transferase, transferring glyc> AT4G31780 (MGD1) transcript variant AT4G31780.1 mRNA, complete cds Length = 1999 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 454 gttcacaactgttatcaccgacttgagcacttgtcacccaacttggtttcacaagcttgt 513 |||||| || ||||| || ||||| |||||||| || || || |||||||| |||||||| Sbjct: 1039 gttcaccacggttattacagacttaagcacttgccatcctacatggtttcataagcttgt 1098 Query: 514 gactagatgttactgtccatcagccgaggtgacaaagagagcactaaaagctggactgaa 573 ||| |||||||| || |||||| | || ||| |||| || || | |||||| ||||| | Sbjct: 1099 gacaagatgttattgcccatcaacagaagtggcaaaaagggctcaaaaagcaggacttga 1158 Query: 574 accttcacaaattaaagtctatggcctccctgt 606 | | |||||||| ||||| |||||||||||||| Sbjct: 1159 aacatcacaaatcaaagtttatggcctccctgt 1191 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 761 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 820 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 821 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 941 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 1000 Query: 416 cg 417 || Sbjct: 1001 cg 1002
>gb|BT008890.1| Arabidopsis thaliana At4g31780 mRNA, complete cds Length = 1602 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 454 gttcacaactgttatcaccgacttgagcacttgtcacccaacttggtttcacaagcttgt 513 |||||| || ||||| || ||||| |||||||| || || || |||||||| |||||||| Sbjct: 816 gttcaccacggttattacagacttaagcacttgccatcctacatggtttcataagcttgt 875 Query: 514 gactagatgttactgtccatcagccgaggtgacaaagagagcactaaaagctggactgaa 573 ||| |||||||| || |||||| | || ||| |||| || || | |||||| ||||| | Sbjct: 876 gacaagatgttattgcccatcaacagaagtggcaaaaagggctcaaaaagcaggacttga 935 Query: 574 accttcacaaattaaagtctatggcctccctgt 606 | | |||||||| ||||| |||||||||||||| Sbjct: 936 aacatcacaaatcaaagtttatggcctccctgt 968 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 538 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 597 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 598 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 642 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 718 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 777 Query: 416 cg 417 || Sbjct: 778 cg 779
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 141152 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 141211 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 141212 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 141256 Score = 65.9 bits (33), Expect = 2e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 498 ggtttcacaagcttgtgactagatgttactgtccatcagccgaggtgacaaagagagcac 557 ||||||| ||||||||||| |||||||| || |||||| | || ||| |||| || || | Sbjct: 141769 ggtttcataagcttgtgacaagatgttattgcccatcaacagaagtggcaaaaagggctc 141828 Query: 558 taaaagctggactgaaaccttcacaaattaaagtctatggcctccctgt 606 |||||| ||||| || | |||||||| ||||| |||||||||||||| Sbjct: 141829 aaaaagcaggacttgaaacatcacaaatcaaagtttatggcctccctgt 141877 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 141549 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 141608 Query: 416 cg 417 || Sbjct: 141609 cg 141610
>emb|AL049607.1|ATF11C18 Arabidopsis thaliana DNA chromosome 4, BAC clone F11C18 (ESSA project) Length = 111517 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 1814 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 1873 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 1874 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 1918 Score = 65.9 bits (33), Expect = 2e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 498 ggtttcacaagcttgtgactagatgttactgtccatcagccgaggtgacaaagagagcac 557 ||||||| ||||||||||| |||||||| || |||||| | || ||| |||| || || | Sbjct: 2431 ggtttcataagcttgtgacaagatgttattgcccatcaacagaagtggcaaaaagggctc 2490 Query: 558 taaaagctggactgaaaccttcacaaattaaagtctatggcctccctgt 606 |||||| ||||| || | |||||||| ||||| |||||||||||||| Sbjct: 2491 aaaaagcaggacttgaaacatcacaaatcaaagtttatggcctccctgt 2539 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 2211 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 2270 Query: 416 cg 417 || Sbjct: 2271 cg 2272
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 12119 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 12060 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 12059 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 12015 Score = 65.9 bits (33), Expect = 2e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 498 ggtttcacaagcttgtgactagatgttactgtccatcagccgaggtgacaaagagagcac 557 ||||||| ||||||||||| |||||||| || |||||| | || ||| |||| || || | Sbjct: 11502 ggtttcataagcttgtgacaagatgttattgcccatcaacagaagtggcaaaaagggctc 11443 Query: 558 taaaagctggactgaaaccttcacaaattaaagtctatggcctccctgt 606 |||||| ||||| || | |||||||| ||||| |||||||||||||| Sbjct: 11442 aaaaagcaggacttgaaacatcacaaatcaaagtttatggcctccctgt 11394 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 11722 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 11663 Query: 416 cg 417 || Sbjct: 11662 cg 11661
>gb|AY092965.1| Arabidopsis thaliana strong similarity to monogalactosyldiacylglycerol synthase, Cucumis sativus, PID:g1805254 (At4g31780) mRNA, complete cds Length = 2116 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 454 gttcacaactgttatcaccgacttgagcacttgtcacccaacttggtttcacaagcttgt 513 |||||| || ||||| || ||||| |||||||| || || || |||||||| |||||||| Sbjct: 1116 gttcaccacggttattacagacttaagcacttgccatcctacatggtttcataagcttgt 1175 Query: 514 gactagatgttactgtccatcagccgaggtgacaaagagagcactaaaagctggactgaa 573 ||| |||||||| || |||||| | || ||| |||| || || | |||||| ||||| | Sbjct: 1176 gacaagatgttattgcccatcaacagaagtggcaaaaagggctcaaaaagcaggacttga 1235 Query: 574 accttcacaaattaaagtctatggcctccctgt 606 | | |||||||| ||||| |||||||||||||| Sbjct: 1236 aacatcacaaatcaaagtttatggcctccctgt 1268 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 838 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 897 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 898 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 942 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 1018 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 1077 Query: 416 cg 417 || Sbjct: 1078 cg 1079
>gb|AF241797.1|AF241797 Arabidopsis thaliana monogalactosyldiacylglycerol synthase (MGD1) mRNA, complete cds Length = 1929 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 454 gttcacaactgttatcaccgacttgagcacttgtcacccaacttggtttcacaagcttgt 513 |||||| || ||||| || ||||| |||||||| || || || |||||||| |||||||| Sbjct: 975 gttcaccacggttattacagacttaagcacttgccatcctacatggtttcataagcttgt 1034 Query: 514 gactagatgttactgtccatcagccgaggtgacaaagagagcactaaaagctggactgaa 573 ||| |||||||| || |||||| | || ||| |||| || || | |||||| ||||| | Sbjct: 1035 gacaagatgttattgcccatcaacagaagtggcaaaaagggctcaaaaagcaggacttga 1094 Query: 574 accttcacaaattaaagtctatggcctccctgt 606 | | |||||||| ||||| |||||||||||||| Sbjct: 1095 aacatcacaaatcaaagtttatggcctccctgt 1127 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 697 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 756 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 757 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 877 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 936 Query: 416 cg 417 || Sbjct: 937 cg 938
>emb|AJ249607.1|SOL249607 Spinacia oleracea mRNA for MGDG synthase A (mgd A gene) Length = 1569 Score = 81.8 bits (41), Expect = 3e-12 Identities = 203/257 (78%) Strand = Plus / Plus Query: 161 caggtattcgtcactgatttgtggactgaacatacaccatggcctttcaaccaacttccc 220 ||||||||||| |||||||| ||| |||| ||||| || ||||| || || ||| | || Sbjct: 490 caggtattcgttactgatttatggtctgagcatactccttggccatttaatcaattacca 549 Query: 221 agaagctatagtttcttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 || ||||||| ||||||||||||||||| || ||||||| |||| || ||||||||| Sbjct: 550 aggagctataacttcttggtgaaacatggccctctgtggaaaatgatgtattatggtaca 609 Query: 281 gcgccacgagtaattcaccagccacattttgctgcaacagcaacattcatcgcgagagag 340 | || || ||||| || || || |||||||||| || | |||||| || ||||| Sbjct: 610 tctcctcgtgtaatccatcaatcaaattttgctgcgacctctgtattcatagcacgagag 669 Query: 341 gttgccaaaggtctgatgaagtaccaaccagatgtgattatcagtgtacatcctttaatg 400 || |||| ||| ||||||| ||||| |||||| | || |||||||| |||||| | ||| Sbjct: 670 gtggccagagggttgatgaaataccagccagatattatcatcagtgtgcatcctctgatg 729 Query: 401 caacatgtcccccttcg 417 |||||||| || ||||| Sbjct: 730 caacatgttccacttcg 746
>dbj|AB047399.1| Arabidopsis thaliana mgdA mRNA for MGDG synthase type A, complete cds Length = 1775 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 454 gttcacaactgttatcaccgacttgagcacttgtcacccaacttggtttcacaagcttgt 513 |||||| || ||||| || ||||| |||||||| || || || |||||||| |||||||| Sbjct: 920 gttcaccacggttattacagacttaagcacttgccatcctacatggtttcataagcttgt 979 Query: 514 gactagatgttactgtccatcagccgaggtgacaaagagagcactaaaagctggactgaa 573 ||| |||||||| || |||||| | || ||| |||| || || | |||||| ||||| | Sbjct: 980 gacaagatgttattgcccatcaacagaagtggcaaaaagggctcaaaaagcaggacttga 1039 Query: 574 accttcacaaattaaagtctatggcctccctgt 606 | | |||||||| ||||| |||||||||||||| Sbjct: 1040 aacatcacaaatcaaagtttatggcctccctgt 1072 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 176 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 235 ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| Sbjct: 642 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 701 Query: 236 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 280 |||||||||||||| | ||||||| ||||| || ||||||||| Sbjct: 702 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 746 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 356 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 415 ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| ||| Sbjct: 822 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 881 Query: 416 cg 417 || Sbjct: 882 cg 883
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 62 aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 121 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||| Sbjct: 34242116 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcctccgccgaggct 34242175 Query: 122 atcaagg 128 ||||||| Sbjct: 34242176 atcaagg 34242182
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 62 aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 121 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||| Sbjct: 77389 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcctccgccgaggct 77448 Query: 122 atcaagg 128 ||||||| Sbjct: 77449 atcaagg 77455
>ref|XM_481404.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1410 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 62 aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 121 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 208 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 267
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 62 aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 121 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 134958 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 134899
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 62 aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 121 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 12258873 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 12258932
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0063H21 Length = 188058 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 62 aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 121 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 132365 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 132424
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 62 aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 121 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 17522 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 17581
>dbj|AK064148.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-C09, full insert sequence Length = 1345 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 62 aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 121 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 25 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 84
>gb|AF271693.1|AF271693 Mycobacteriophage Bxb1, complete sequence Length = 50550 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 gcgtccgccgaggccatcaaggccgc 132 ||||| |||||||||||||||||||| Sbjct: 9751 gcgtctgccgaggccatcaaggccgc 9776
>ref|XM_383946.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03770.1) partial mRNA Length = 1092 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 cgaggcgcccaagaaggtgct 72 ||||||||||||||||||||| Sbjct: 342 cgaggcgcccaagaaggtgct 362
>emb|CR381684.9| Zebrafish DNA sequence from clone CH211-28P3 in linkage group 23, complete sequence Length = 184232 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 tgattatcagtgtacatcctttaat 399 ||||| ||||||||||||||||||| Sbjct: 114541 tgattgtcagtgtacatcctttaat 114517
>gb|AC151371.4| Aotus nancymaae clone CH258-333O11, complete sequence Length = 103418 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 cagccgaggtgacaaagagag 554 ||||||||||||||||||||| Sbjct: 66691 cagccgaggtgacaaagagag 66711
>ref|NM_126865.2| Arabidopsis thaliana MGDC; 1,2-diacylglycerol 3-beta-galactosyltransferase AT2G11810 (MGDC) mRNA, complete cds Length = 1564 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 77 ctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggccatc 124 ||||||||||| || ||||| ||||| || || || |||||||||||| Sbjct: 254 ctcatgagtgataccggcggtggccaccgtgcttcagccgaggccatc 301
>ref|NM_122048.2| Arabidopsis thaliana MGD2; 1,2-diacylglycerol 3-beta-galactosyltransferase/ transferase, transferring glycosyl groups AT5G20410 (MGD2) mRNA, complete cds Length = 1697 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 agtgtacatcctttaatgcaacat 406 ||||| |||||||||||||||||| Sbjct: 614 agtgttcatcctttaatgcaacat 637
>gb|AY618926.1| Danio rerio PKD2 mRNA, complete cds Length = 3362 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 gcactaaaagctggactgaaacct 577 |||| ||||||||||||||||||| Sbjct: 64 gcaccaaaagctggactgaaacct 87
>gb|AC007893.8| Drosophila melanogaster clone BACR02E15, complete sequence Length = 182430 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcgtccgccgaggccatcaa 126 |||||||||||||||||||| Sbjct: 140683 gcgtccgccgaggccatcaa 140702
>gb|AE009266.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 36 of 187 of the complete sequence Length = 12013 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggaaggcgtggcgcgggccg 53 |||||||||||||||||||| Sbjct: 8354 ggaaggcgtggcgcgggccg 8335
>gb|AE008345.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 149 of 187 of the complete sequence Length = 11578 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggaaggcgtggcgcgggccg 53 |||||||||||||||||||| Sbjct: 10273 ggaaggcgtggcgcgggccg 10292
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gccgaggccatcaaggccgc 132 |||||||||||||||||||| Sbjct: 1499746 gccgaggccatcaaggccgc 1499727
>gb|BT010021.1| Drosophila melanogaster RE09305 full insert cDNA Length = 3336 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcgtccgccgaggccatcaa 126 |||||||||||||||||||| Sbjct: 2310 gcgtccgccgaggccatcaa 2329
>emb|CR788312.9| Zebrafish DNA sequence from clone DKEY-192D9, complete sequence Length = 177966 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 gcactaaaagctggactgaaacct 577 |||| ||||||||||||||||||| Sbjct: 92046 gcaccaaaagctggactgaaacct 92069
>gb|AC181987.3| Cavia porcellus clone CH234-261L8, complete sequence Length = 125192 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 565 tggactgaaaccttcacaaa 584 |||||||||||||||||||| Sbjct: 33770 tggactgaaaccttcacaaa 33789
>ref|NM_170450.1| Drosophila melanogaster CG31036-RA (CG31036), mRNA Length = 3320 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcgtccgccgaggccatcaa 126 |||||||||||||||||||| Sbjct: 2310 gcgtccgccgaggccatcaa 2329
>gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map mi421, complete sequence Length = 98432 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 77 ctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggccatc 124 ||||||||||| || ||||| ||||| || || || |||||||||||| Sbjct: 39785 ctcatgagtgataccggcggtggccaccgtgcttcagccgaggccatc 39738
>gb|AY078038.1| Arabidopsis thaliana AT5g20410/F5O24_300 mRNA, complete cds Length = 1185 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 agtgtacatcctttaatgcaacat 406 ||||| |||||||||||||||||| Sbjct: 304 agtgttcatcctttaatgcaacat 327
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 cgtggcgcgggccgaggcgc 59 |||||||||||||||||||| Sbjct: 733035 cgtggcgcgggccgaggcgc 733016
>gb|AC025656.7| Homo sapiens chromosome 18, clone RP11-36L19, complete sequence Length = 193351 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 aattcaccagccacattttg 311 |||||||||||||||||||| Sbjct: 72727 aattcaccagccacattttg 72746
>emb|CR389295.1| Gallus gallus finished cDNA, clone ChEST115g10 Length = 1709 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 ccatcttttgccaaacctgt 630 |||||||||||||||||||| Sbjct: 421 ccatcttttgccaaacctgt 402
>gb|AF372926.1|AF372926 Arabidopsis thaliana AT5g20410/F5O24_300 mRNA, complete cds Length = 1585 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 agtgtacatcctttaatgcaacat 406 ||||| |||||||||||||||||| Sbjct: 502 agtgttcatcctttaatgcaacat 525
>emb|BX819497.1|CNS0AA20 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1565 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 77 ctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggccatc 124 ||||||||||| || ||||| ||||| || || || |||||||||||| Sbjct: 257 ctcatgagtgataccggcggtggccaccgtgcttcagccgaggccatc 304
>emb|BX829667.1|CNS0A000 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZF08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1604 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 agtgtacatcctttaatgcaacat 406 ||||| |||||||||||||||||| Sbjct: 601 agtgttcatcctttaatgcaacat 624
>gb|AC007886.7|AC007886 Drosophila melanogaster, chromosome 3R, region 99D-99D, BAC clone BACR07A18, complete sequence Length = 168469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcgtccgccgaggccatcaa 126 |||||||||||||||||||| Sbjct: 21579 gcgtccgccgaggccatcaa 21598
>gb|AC105053.3| Homo sapiens BAC clone RP11-688J22 from 2, complete sequence Length = 108768 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tgatttgtggactgaacata 194 |||||||||||||||||||| Sbjct: 24369 tgatttgtggactgaacata 24350
>ref|NM_001002310.1| Danio rerio polycystic kidney disease 2 (pkd2), mRNA Length = 3362 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 gcactaaaagctggactgaaacct 577 |||| ||||||||||||||||||| Sbjct: 64 gcaccaaaagctggactgaaacct 87
>gb|AC129910.4| Branchiostoma floridae, clone -37E14, complete sequence Length = 80763 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tgcaacagcaacattcatcg 332 |||||||||||||||||||| Sbjct: 37496 tgcaacagcaacattcatcg 37515
>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 Length = 70169 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 agtgtacatcctttaatgcaacat 406 ||||| |||||||||||||||||| Sbjct: 326 agtgttcatcctttaatgcaacat 349
>gb|AE003771.3| Drosophila melanogaster chromosome 3R, section 109 of 118 of the complete sequence Length = 242528 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcgtccgccgaggccatcaa 126 |||||||||||||||||||| Sbjct: 177615 gcgtccgccgaggccatcaa 177634
>gb|AC102895.7| Mus musculus chromosome 15, clone RP24-356D22, complete sequence Length = 165778 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gaggccatcaaggccgcttt 135 |||||||||||||||||||| Sbjct: 86477 gaggccatcaaggccgcttt 86458
>gb|AC006221.1|AC006221 Homo sapiens chromosome 18, clone hRPK.142_O_10, complete sequence Length = 79085 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 aattcaccagccacattttg 311 |||||||||||||||||||| Sbjct: 45485 aattcaccagccacattttg 45504
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gcgtccgccgaggccatcaa 126 |||||||||||||||||||| Sbjct: 3247130 gcgtccgccgaggccatcaa 3247111
>emb|AL928538.5| Mouse DNA sequence from clone RP23-102P12 on chromosome X, complete sequence Length = 140604 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ttggtgaaacatggaccctt 255 |||||||||||||||||||| Sbjct: 37476 ttggtgaaacatggaccctt 37495
>dbj|AB047398.1| Arabidopsis thaliana mgdC mRNA for MGDG synthase type C, complete cds Length = 1574 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 77 ctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggccatc 124 ||||||||||| || ||||| ||||| || || || |||||||||||| Sbjct: 254 ctcatgagtgataccggcggtggccaccgtgcttcagccgaggccatc 301
>emb|AJ000331.1|ATMGDGSYN Arabidopsis thaliana mRNA for monogalactosyldiacylglycerol synthase Length = 1648 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 agtgtacatcctttaatgcaacat 406 ||||| |||||||||||||||||| Sbjct: 614 agtgttcatcctttaatgcaacat 637 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,761,221 Number of Sequences: 3902068 Number of extensions: 4761221 Number of successful extensions: 86230 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85861 Number of HSP's gapped (non-prelim): 368 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)