ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63k11 |
|---|---|
| Clone Library Name | barley_pub |
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 358 bits (920), Expect = 4e-99 Identities = 177/178 (99%), Positives = 177/178 (99%) Frame = +2 Query: 17 ADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNT 196 ADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNT Sbjct: 56 ADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNT 115 Query: 197 MDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPI 376 MDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPI Sbjct: 116 MDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPI 175 Query: 377 MMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MMSAGELESGN GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV Sbjct: 176 MMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 232
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 347 bits (889), Expect = 2e-95 Identities = 165/177 (93%), Positives = 172/177 (97%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 D+WKGLAYDISDDQQDITRGKGIVDSLFQAP G GTHEA+LSSYEY+SQGLRKYDFDNTM Sbjct: 59 DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTM 118 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 G YIAPAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIM Sbjct: 119 GGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM 178 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAAD+I KGKMCCLFINDLDAGAGRMGGTTQYTV Sbjct: 179 MSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTV 235
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 340 bits (871), Expect = 2e-93 Identities = 164/177 (92%), Positives = 170/177 (96%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 DRWKGLAYDISDDQQDITRGKG VDSLFQAP GDGTHEA+LSSYEY+SQGLR YDFDNTM Sbjct: 60 DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTM 119 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 G YIAP+FMDKL+VH++KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM Sbjct: 120 GGFYIAPSFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 179 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGN GEPAKLIRQRYREAADII KGKMCCLFINDLDAGAGRMGGTTQYTV Sbjct: 180 MSAGELESGN-GEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTV 235
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 333 bits (855), Expect = 1e-91 Identities = 157/177 (88%), Positives = 168/177 (94%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 DRW+GLAYD SDDQQDITRGKG+VDS+FQAPMG GTH A+LSSYEY+SQGLR+Y+ DN M Sbjct: 69 DRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMM 128 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIAPAFMDKL+VH+ KNF+TLPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIM Sbjct: 129 DGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIM 188 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAAD+I KGKMCCLFINDLDAGAGRMGGTTQYTV Sbjct: 189 MSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTV 245
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 332 bits (851), Expect = 4e-91 Identities = 156/177 (88%), Positives = 169/177 (95%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 D+WKGLAYDISDDQQDITRGKG+VD+LFQAPM GTH A++SSY+YISQGLR+Y+ DN M Sbjct: 69 DKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNM 128 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIAPAFMDKL+VH+ KNF++LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIM Sbjct: 129 DGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM 188 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAADII KGKMCCLFINDLDAGAGRMGGTTQYTV Sbjct: 189 MSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTV 245
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 332 bits (851), Expect = 4e-91 Identities = 156/177 (88%), Positives = 169/177 (95%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 D+WKGLAYDISDDQQDITRGKG+VD+LFQAPM GTH A++SSY+YISQGLR+Y+ DN M Sbjct: 69 DKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNM 128 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIAPAFMDKL+VH+ KNF++LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIM Sbjct: 129 DGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM 188 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAADII KGKMCCLFINDLDAGAGRMGGTTQYTV Sbjct: 189 MSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTV 245
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 329 bits (844), Expect = 3e-90 Identities = 157/177 (88%), Positives = 167/177 (94%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 DRWKGLAYDISDDQQDITRGKG+VD+LFQAPMGDGTH A+LSSY+YISQG + Y+FDN M Sbjct: 65 DRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMM 124 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIA FMDKL+VHL+KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI PIM Sbjct: 125 DGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIM 184 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREA+D+I KGKM CLFINDLDAGAGRMGGTTQYTV Sbjct: 185 MSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTV 241
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 326 bits (835), Expect = 3e-89 Identities = 153/177 (86%), Positives = 164/177 (92%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 D+W+GLA+D SDDQQDITRGKG+ D LFQAPMG GTH A+LSSYEYIS GLR Y +DN + Sbjct: 66 DKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNV 125 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIAPAFMDKL VH+ KNF+TLPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIM Sbjct: 126 DGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIM 185 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAADII KGKMCCLFINDLDAGAGR+GGTTQYTV Sbjct: 186 MSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTV 242
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 323 bits (829), Expect = 2e-88 Identities = 156/177 (88%), Positives = 165/177 (93%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 DRWKGLA+D SDDQQDITRGKG VDSLFQAP G GTH AI+SSYEYIS GLR+Y+FDN M Sbjct: 69 DRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNM 128 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIAPAFMDKL+VH+ KNFMTLPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIM Sbjct: 129 DGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIM 188 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAADII KGKMC LFINDLDAGAGR+GGTTQYTV Sbjct: 189 MSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTV 245
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 323 bits (828), Expect = 2e-88 Identities = 151/177 (85%), Positives = 168/177 (94%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 DRW+GLAYD+SDDQQDITRGKG+VDSLFQAPM GTH A++SS++Y+S GLR+Y+FDN Sbjct: 73 DRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIK 132 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIAPAF+DKL+VH+AKNFMTLPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIM Sbjct: 133 DGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIM 192 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREA+D+I KGKMC LFINDLDAGAGR+GGTTQYTV Sbjct: 193 MSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTV 249
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 322 bits (826), Expect = 3e-88 Identities = 152/178 (85%), Positives = 163/178 (91%) Frame = +2 Query: 17 ADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNT 196 +DRWKGL D SDDQQDITRGKG+VDSLFQAP G GTH A+L SYEY+SQGLR+Y+ DN Sbjct: 72 SDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNK 131 Query: 197 MDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPI 376 +DG YIAPAFMDKL+VH+ KNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF KMGINPI Sbjct: 132 LDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPI 191 Query: 377 MMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MMSAGELESGNAGEPAKLIRQRYREAA+II KG MCCLFINDLDAGAGRMGGTTQYTV Sbjct: 192 MMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTV 249
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 322 bits (826), Expect = 3e-88 Identities = 150/179 (83%), Positives = 164/179 (91%) Frame = +2 Query: 14 YADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 193 Y+DRWKGL D SDDQQDI RGKG+VDSLFQAP G GTH A+L SYEY+SQGLR+Y+ DN Sbjct: 71 YSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDN 130 Query: 194 TMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 373 T+DG YIAP+FMDKL+VH+ KNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINP Sbjct: 131 TLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINP 190 Query: 374 IMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 IMMSAGELESGNAGEPAKLIRQRYREAA+II KG +CCLFINDLDAGAGRMGGTTQYTV Sbjct: 191 IMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTV 249
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 315 bits (807), Expect = 5e-86 Identities = 153/177 (86%), Positives = 163/177 (92%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 DRWKGLAYDISDDQQDITRGKG+VD LFQAPM GTH A++SSYEY+S GLR+ DN Sbjct: 73 DRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIK 130 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIAPAF+DKL+VH+ KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM Sbjct: 131 DGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 190 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGR+GGTTQYTV Sbjct: 191 MSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTV 247
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 314 bits (804), Expect = 1e-85 Identities = 148/177 (83%), Positives = 160/177 (90%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 DRWKGL + SDDQQDI RGKG+VDSLFQAP G GTH AI++SYEY+SQ L+ Y DN + Sbjct: 68 DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKL 127 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 DG YIAPAFMDKL+VH+ KNF+TLPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIM Sbjct: 128 DGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIM 187 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAA+II KG MCCLFINDLDAGAGRMGGTTQYTV Sbjct: 188 MSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTV 244
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 295 bits (755), Expect = 6e-80 Identities = 142/177 (80%), Positives = 154/177 (87%) Frame = +2 Query: 20 DRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTM 199 D+W LA D SDDQ DI RGKG+VDSLFQAP GTH I SS+EY SQGLRKYD DN + Sbjct: 67 DKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNML 126 Query: 200 DGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 379 YIAPAFMDKL+VH+ KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVFAK+GINPIM Sbjct: 127 GDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIM 186 Query: 380 MSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTV 550 MSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDL+ GAGRMGGTTQYTV Sbjct: 187 MSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTV 243
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 254 bits (648), Expect = 1e-67 Identities = 127/185 (68%), Positives = 147/185 (79%), Gaps = 3/185 (1%) Frame = +2 Query: 5 ARGYADRWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAILSSYEYISQGLR 175 +R RW+ + D SDDQQDITRG+ +VD LFQ G GTH A+LSS EY+SQ Sbjct: 36 SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-- 93 Query: 176 KYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFA 355 + F+N DG YI+PAF+DK+ +H+AKNFM LP IKVPLILGIWGGKGQGK+FQC L + Sbjct: 94 RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYK 153 Query: 356 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGT 535 K+GI PI+MSAGELESGNAGEPAKLIR RYREA+DII KG+MC LFINDLDAGAGRMG T Sbjct: 154 KLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDT 213 Query: 536 TQYTV 550 TQYTV Sbjct: 214 TQYTV 218
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 155 bits (392), Expect = 7e-38 Identities = 75/115 (65%), Positives = 91/115 (79%), Gaps = 1/115 (0%) Frame = +2 Query: 209 YIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 388 YIAP F+DKL VH+ KNF+ LP ++VPLILGI G KG+GK+FQCEL F KMG+ ++S Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISG 63 Query: 389 GELESGNAGEPAKLIRQRYREAADIIN-KGKMCCLFINDLDAGAGRMGGTTQYTV 550 GELES +AG+PA+LIR RYRE A++I +GKMC L INDLDAGAGR TQYTV Sbjct: 64 GELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTV 118
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 155 bits (391), Expect = 9e-38 Identities = 75/115 (65%), Positives = 91/115 (79%), Gaps = 1/115 (0%) Frame = +2 Query: 209 YIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 388 YIAP F+DKL VH+ KNF+ +P ++VPLILGI G KG+GK+FQCEL F KMGI ++S Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISG 63 Query: 389 GELESGNAGEPAKLIRQRYREAADIIN-KGKMCCLFINDLDAGAGRMGGTTQYTV 550 GELES +AG+PA+LIR RYRE A++I +GKMC L INDLDAGAGR TQYTV Sbjct: 64 GELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTV 118
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 42.7 bits (99), Expect = 7e-04 Identities = 27/86 (31%), Positives = 44/86 (51%) Frame = +2 Query: 275 NIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 454 NIK P + ++G G GK+ + V + N I + EL S GE K +R+ +R+A Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544 Query: 455 ADIINKGKMCCLFINDLDAGAGRMGG 532 + C +F +++D+ A R GG Sbjct: 545 RQV----APCVIFFDEIDSLAPRRGG 566
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/82 (28%), Positives = 44/82 (53%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 IK P + ++G G GK+ V A +G+N + + + + GE A++IR+ + A Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA- 221 Query: 458 DIINKGKMCCLFINDLDAGAGR 523 + + C +F++++DA GR Sbjct: 222 ---KEHEPCVIFMDEIDAIGGR 240
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 37.4 bits (85), Expect = 0.028 Identities = 21/77 (27%), Positives = 40/77 (51%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P L ++G G GK+ V + + I++S + +AGE K++R+ + EA+ Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112 Query: 458 DIINKGKMCCLFINDLD 508 K +FI+++D Sbjct: 113 SHAVSDKPSVIFIDEID 129
>RECA_LISMO (Q9L723) Protein recA (Recombinase A)| Length = 348 Score = 37.0 bits (84), Expect = 0.037 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + +INK K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISMF (Q71ZS2) Protein recA (Recombinase A)| Length = 348 Score = 37.0 bits (84), Expect = 0.037 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + +INK K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISIN (Q92BV7) Protein recA (Recombinase A)| Length = 348 Score = 37.0 bits (84), Expect = 0.037 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + +INK K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 37.0 bits (84), Expect = 0.037 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 482 CCLFINDLDAGAGR 523 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.0 bits (84), Expect = 0.037 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 482 CCLFINDLDAGAGR 523 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.0 bits (84), Expect = 0.037 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 482 CCLFINDLDAGAGR 523 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 36.2 bits (82), Expect = 0.063 Identities = 47/211 (22%), Positives = 81/211 (38%), Gaps = 57/211 (27%) Frame = +2 Query: 71 TRGKGIVDSLFQAPMGDGTHEAILSSYEYISQ-----GLRKYDFDNTMDGLYIAPAFMDK 235 TRG + D + + + D TH + + E +S+ LR+Y + +D I P+ +D+ Sbjct: 370 TRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDR 429 Query: 236 LIVHL-----------------------------------AKNFM--------------T 268 +IV AKN + T Sbjct: 430 MIVKREDFKGALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFT 489 Query: 269 LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 448 ++ P + ++G G GK+ + V + N I + +L S GE K IRQ +R Sbjct: 490 RMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFR 549 Query: 449 EAADIINKGKMCCLFINDLDA---GAGRMGG 532 +A + +F ++LD+ G G+ GG Sbjct: 550 KARQV----APTVIFFDELDSLAPGRGQTGG 576
>RECA_LISWE (Q83TH3) Protein recA (Recombinase A)| Length = 348 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISSE (Q83TH4) Protein recA (Recombinase A)| Length = 348 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISIV (Q83TH2) Protein recA (Recombinase A)| Length = 348 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_GEOSL (P62215) Protein recA (Recombinase A)| Length = 338 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ II+K C +FIN + G M G + T Sbjct: 157 GEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETT 209
>RECA_TREPA (O83690) Protein recA (Recombinase A)| Length = 407 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+L+ Q R+ IINK K +FIN L G M G + T Sbjct: 170 GDMGDAHVGLIARLMSQALRKLTSIINKSKCTLIFINQLRMKIGIMFGNPETT 222
>RECA_CLOAB (P58254) Protein recA (Recombinase A)| Length = 349 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ INK K +FIN L G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLTGSINKSKCIAIFINQLREKVGIMFGNPETT 208
>RECA_BACHD (Q9KAA7) Protein recA (Recombinase A)| Length = 349 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>RECA_CLOTE (Q895I5) Protein recA (Recombinase A)| Length = 350 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ A INK +FIN L G M G+ + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPETT 208
>RECA_BACSK (Q5WFX1) Protein recA (Recombinase A)| Length = 350 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>RECA1_LACLA (Q01840) Protein recA, chromosomal (Recombinase A)| Length = 387 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/53 (35%), Positives = 28/53 (52%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+++ Q R+ A INK K +FIN L G M G+ + T Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETT 223
>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 198 Score = 35.0 bits (79), Expect = 0.14 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +2 Query: 293 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADI 463 I+ I GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 13 IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69 Query: 464 INKGKMCCLFINDLDAGAGRMGG 532 + G + L + A G G Sbjct: 70 VPSGIVLELLKEAMVASLGDTRG 92
>RECA_OCEIH (Q8CXG7) Protein recA (Recombinase A)| Length = 347 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETT 207
>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 193 Score = 35.0 bits (79), Expect = 0.14 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +2 Query: 293 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADI 463 I+ + GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 9 IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65 Query: 464 INKGKMCCLFINDLDAGAGRMGG 532 + G + L + A G G Sbjct: 66 VPSGVVLELLKEAMVASLGNTKG 88
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 35.0 bits (79), Expect = 0.14 Identities = 22/76 (28%), Positives = 38/76 (50%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GKS+ + V + +S+ +L S GE KL++Q + A + K Sbjct: 171 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMA----RENKP 226 Query: 482 CCLFINDLDAGAGRMG 529 +FI+++DA G G Sbjct: 227 SIIFIDEVDALTGTRG 242
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 34.7 bits (78), Expect = 0.18 Identities = 20/73 (27%), Positives = 39/73 (53%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GKS+ + V + G +S+ +L S GE +L+RQ + ++ + K Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLF----EMAREQKP 222 Query: 482 CCLFINDLDAGAG 520 +FI+++D+ G Sbjct: 223 SIIFIDEIDSLCG 235
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 34.7 bits (78), Expect = 0.18 Identities = 24/90 (26%), Positives = 41/90 (45%) Frame = +2 Query: 266 TLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 445 T K+P + + G G GK+ + + + G+ +S E G A +R + Sbjct: 199 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 258 Query: 446 REAADIINKGKMCCLFINDLDAGAGRMGGT 535 ++A D C +FI+++DA GR GT Sbjct: 259 KKAKD----NAPCIVFIDEIDA-VGRQRGT 283
>RECA_ENTFA (P42444) Protein recA (Recombinase A)| Length = 348 Score = 34.3 bits (77), Expect = 0.24 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 156 GEMGASHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPETT 208
>RECA_LACPE (Q6KCK3) Protein recA (Recombinase A)| Length = 378 Score = 34.3 bits (77), Expect = 0.24 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + +NK K LFIN + G M G + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208
>RECA_ENTFC (Q6KCJ6) Protein recA (Recombinase A)| Length = 349 Score = 34.3 bits (77), Expect = 0.24 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>RECA_ENTMU (Q6KCJ3) Protein recA (Recombinase A)| Length = 346 Score = 34.3 bits (77), Expect = 0.24 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>RECA_ENTHR (Q6KCJ5) Protein recA (Recombinase A)| Length = 346 Score = 34.3 bits (77), Expect = 0.24 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>RECA_LACPL (Q88UZ4) Protein recA (Recombinase A)| Length = 380 Score = 34.3 bits (77), Expect = 0.24 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + +NK K LFIN + G M G + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208
>RECA_ACHLA (P29225) Protein recA (Recombinase A)| Length = 331 Score = 34.3 bits (77), Expect = 0.24 Identities = 15/54 (27%), Positives = 30/54 (55%) Frame = +2 Query: 386 AGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 AG++ + + G A+++ Q R+ + +I+K + +FIN + G M G + T Sbjct: 156 AGDMSANHVGLQARMMSQAMRKMSGVISKSNVVAIFINQIREKVGVMFGNPETT 209
>RECA_BACLI (P62211) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.31 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>RECA_BACLD (Q65JF2) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.31 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 33.9 bits (76), Expect = 0.31 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 1/116 (0%) Frame = +2 Query: 191 NTMDGLYIAPAFMDKLIVHLAK-NFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 367 N + G+ A ++++ L K T K+P + + G G GK+ + + + G+ Sbjct: 173 NDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232 Query: 368 NPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGT 535 +S E G A +R +++A + C +FI+++DA GR GT Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKA----KENSPCIVFIDEIDA-VGRQRGT 283
>RECA_BACCR (Q81A16) Protein recA (Recombinase A)| Length = 343 Score = 33.9 bits (76), Expect = 0.31 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>RECA_BACC1 (P62210) Protein recA (Recombinase A)| Length = 343 Score = 33.9 bits (76), Expect = 0.31 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>RECA_BACAN (Q9APZ2) Protein recA (Recombinase A)| Length = 343 Score = 33.9 bits (76), Expect = 0.31 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 155 GDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>RECA_CHLTE (O52393) Protein recA (Recombinase A)| Length = 346 Score = 33.9 bits (76), Expect = 0.31 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G A+L+ Q R+ I+K CLFIN L G M G+ + T Sbjct: 170 GEMGDSVVGLQARLMSQALRKLTGAISKSSSVCLFINQLRDKIGVMYGSPETT 222
>RECA_THETN (Q8RA55) Protein recA (Recombinase A)| Length = 342 Score = 33.9 bits (76), Expect = 0.31 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ A + +K K +FIN L G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGVTSKSKSIVVFINQLREKVGVMFGNPETT 208
>RECA_BACSU (P16971) Protein recA (Recombinase A)| Length = 347 Score = 33.9 bits (76), Expect = 0.31 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 154 GDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 206
>RECA_BORBU (Q59180) Protein recA (Recombinase A)| Length = 365 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = +2 Query: 365 INPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQY 544 + P + GE+ G A+L+ + R+ I++K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQIRMRIGVMFGNPET 223 Query: 545 T 547 T Sbjct: 224 T 224
>RECA_STRLI (P48294) Protein recA (Recombinase A)| Length = 374 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N+ K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_STRCO (O50487) Protein recA (Recombinase A)| Length = 374 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N+ K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_STRAM (P41054) Protein recA (Recombinase A)| Length = 372 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N+ K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)| Length = 372 Score = 33.5 bits (75), Expect = 0.41 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = +2 Query: 344 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGR 523 +V + + P GE+ + G A+L+ Q R+ I K C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQIRMKIGV 200 Query: 524 MGGTTQYT 547 M G + T Sbjct: 201 MFGNPETT 208
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 33.5 bits (75), Expect = 0.41 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = +2 Query: 308 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCC 487 G G GK+ + V ++ + I M+ EL GE AKL+R ++ A D + Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD----HEPAV 245 Query: 488 LFINDLDAGAGR 523 +FI+++DA A + Sbjct: 246 VFIDEIDAIASK 257
>RECA_STRCT (P41055) Protein recA (Recombinase A) (Fragment)| Length = 142 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N+ K +FIN L G M G+ + T Sbjct: 89 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 141
>RECA_BORGA (Q662N0) Protein recA (Recombinase A)| Length = 362 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = +2 Query: 365 INPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQY 544 + P + GE+ G A+L+ + R+ I++K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPET 223 Query: 545 T 547 T Sbjct: 224 T 224
>RECA_STRVL (P48295) Protein recA (Recombinase A)| Length = 377 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N+ K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_STRAW (Q82KB1) Protein recA (Recombinase A)| Length = 377 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N+ K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>RECA_BORHE (Q8VS69) Protein recA (Recombinase A)| Length = 356 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G A+L+ + R+ I++K C +FIN L G M G + T Sbjct: 170 GEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQLRMKIGVMFGNPETT 222
>RECA_STRRM (P95846) Protein recA (Recombinase A)| Length = 376 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N+ K +FIN L G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 209
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 33.1 bits (74), Expect = 0.53 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 + C +F++++DA GAG GG Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGG 278
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 33.1 bits (74), Expect = 0.53 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 + C +F++++DA GAG GG Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGG 278
>RECA_ENTGA (Q6KCK0) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.53 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGIMFGNPETT 208
>RECA_CLOPE (P94666) Protein recA (Recombinase A)| Length = 352 Score = 33.1 bits (74), Expect = 0.53 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ INK +FIN L G M G + T Sbjct: 159 GEMGDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPETT 211
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 33.1 bits (74), Expect = 0.53 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 5/97 (5%) Frame = +2 Query: 266 TLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 445 T K+P + + G G GK+ + + + G+ +S E G A +R + Sbjct: 198 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 257 Query: 446 REAADIINKGKMCCLFINDLDA-----GAGRMGGTTQ 541 ++A + C +FI+++DA GAG GG + Sbjct: 258 KKA----KENAPCLIFIDEIDAVGRQRGAGIGGGNDE 290
>RECA_TREDE (P62221) Protein recA (Recombinase A)| Length = 414 Score = 33.1 bits (74), Expect = 0.53 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = +2 Query: 365 INPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQY 544 + P AGE+ + G A+L+ Q R+ II K +FIN + G M G+ + Sbjct: 161 LTPQAEIAGEMGDSHMGLQARLMSQALRKLTAIIGKSNCMIIFINQIRMKIGVMFGSPET 220 Query: 545 T 547 T Sbjct: 221 T 221
>RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2)| Length = 358 Score = 33.1 bits (74), Expect = 0.53 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ I K + C +FIN + G M G + T Sbjct: 160 GEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQIRMKIGVMFGNPETT 212
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 33.1 bits (74), Expect = 0.53 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = +2 Query: 308 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCC 487 G G GK+ + ++ + + ++A E+ SG +GE + +R+ + +A C Sbjct: 305 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAV----SNAPCI 360 Query: 488 LFINDLDA 511 +FI+++DA Sbjct: 361 IFIDEIDA 368 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/68 (27%), Positives = 33/68 (48%) Frame = +2 Query: 308 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCC 487 G G GK+ + V + G+N I + EL + GE + +RQ ++ A C Sbjct: 622 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 677 Query: 488 LFINDLDA 511 +F +++DA Sbjct: 678 IFFDEVDA 685
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 32.7 bits (73), Expect = 0.69 Identities = 19/74 (25%), Positives = 37/74 (50%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GK+ + V + + + + EL GE AKL+R ++ + + Sbjct: 187 LYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK----LAKEKSP 242 Query: 482 CCLFINDLDAGAGR 523 C +FI+++DA A + Sbjct: 243 CIIFIDEIDAVASK 256
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 32.7 bits (73), Expect = 0.69 Identities = 21/85 (24%), Positives = 39/85 (45%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQA-- 251 Query: 461 IINKGKMCCLFINDLDAGAGRMGGT 535 + C +F++++DA GR GT Sbjct: 252 --KQNSPCIIFVDEIDA-VGRQRGT 273
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 32.7 bits (73), Expect = 0.69 Identities = 24/89 (26%), Positives = 40/89 (44%) Frame = +2 Query: 254 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 433 + F TL I P + ++G G GK+ V + I + EL GE A+++ Sbjct: 233 ERFATL-GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMV 291 Query: 434 RQRYREAADIINKGKMCCLFINDLDAGAG 520 R+ + A K C +F +++DA G Sbjct: 292 RELFEMA----RTKKACIIFFDEIDAVGG 316
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 32.7 bits (73), Expect = 0.69 Identities = 20/76 (26%), Positives = 36/76 (47%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GK+ V A+ G+N I + E+ + G + +R+ + A K Sbjct: 838 LYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA----QAAKP 893 Query: 482 CCLFINDLDAGAGRMG 529 C LF ++ D+ A + G Sbjct: 894 CILFFDEFDSIAPKRG 909
>CLPX_BIFLO (Q8G5R1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 472 Score = 32.7 bits (73), Expect = 0.69 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = +2 Query: 308 GGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAAD-IINKGKM 481 G G GK++ + + M + ++ A L E+G G+ + + QR +AAD +++ + Sbjct: 154 GPTGVGKTYLAQALARVMNVPFVITDATTLTEAGYVGDDVETVLQRLLQAADGDVSRAQH 213 Query: 482 CCLFINDLDAGAGRMGGTTQYT 547 ++I+++D A + G T T Sbjct: 214 GIIYIDEIDKIARKSGENTSIT 235
>RECA_PORGI (P77925) Protein recA (Recombinase A)| Length = 340 Score = 32.7 bits (73), Expect = 0.69 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G A+L+ Q R+ I+K C+FIN L G + G + T Sbjct: 165 GEMGDNKVGLHARLMSQALRKMTGAISKSNTTCIFINQLREKIGVLFGNPETT 217
>RECA_RUMAL (P49985) Protein recA (Recombinase A) (Fragment)| Length = 121 Score = 32.7 bits (73), Expect = 0.69 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + INK K +FIN + G M G + T Sbjct: 66 GEMGDTHVGLQARLMSQALRKLSGEINKTKTIAIFINQIREKVGVMFGNPETT 118
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 32.7 bits (73), Expect = 0.69 Identities = 21/78 (26%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 255 IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA- 313 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI+++D+ Sbjct: 314 ---EKNSPAIIFIDEIDS 328
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 32.7 bits (73), Expect = 0.69 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI++LDA Sbjct: 294 ---EKNAPAIIFIDELDA 308
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.69 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.69 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.69 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.69 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 32.7 bits (73), Expect = 0.69 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 +WG G GK+ + V + N I + EL + GE + IRQ + A + Sbjct: 572 LWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASV----P 627 Query: 482 CCLFINDLDA 511 C +F ++LDA Sbjct: 628 CVIFFDELDA 637 Score = 32.3 bits (72), Expect = 0.90 Identities = 22/78 (28%), Positives = 37/78 (47%) Frame = +2 Query: 308 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCC 487 G G GK+ + ++ + I +SA + SG +GE K IR + EA + C Sbjct: 246 GPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSL----APCL 301 Query: 488 LFINDLDAGAGRMGGTTQ 541 +F +++DA + G Q Sbjct: 302 VFFDEIDAITPKRDGGAQ 319
>RECA_CHLAU (O52394) Protein recA (Recombinase A)| Length = 351 Score = 32.7 bits (73), Expect = 0.69 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 11/81 (13%) Frame = +2 Query: 338 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADIINKGKMC 484 CE++ I+ I++ + GE+ G A+L+ Q R+ + I+K + Sbjct: 131 CEMLVRSNAIDVIVIDSVAALVPRAEIEGEMGDSMPGMQARLMSQALRKLSGAISKSRTV 190 Query: 485 CLFINDLDAGAGRMGGTTQYT 547 +FIN L G M GT + T Sbjct: 191 VIFINQLRMKIGVMLGTPETT 211
>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) Length = 525 Score = 32.3 bits (72), Expect = 0.90 Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 1/76 (1%) Frame = +1 Query: 157 HQPGPAEVRLRQHHGRAVHRAGIHGQAHRPPRQELHDTPQHQGSSHPGYLGRQGTGQVVP 336 H +++ +HH H G H AH P + H QH HP G G Sbjct: 342 HNNNSSDLHPHKHHSHEQHPHGHHPHAHHPHEHDTH--RQHPHGHHPH--GHHPHGHHP- 396 Query: 337 V*AGVRQDGHQPH-HD 381 G GH PH HD Sbjct: 397 --HGHHPHGHHPHCHD 410
>RECA_STRP9 (P0C096) Protein recA (Recombinase A)| Length = 378 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_STRP8 (Q8NZ30) Protein recA (Recombinase A)| Length = 378 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_STRP6 (Q5X9I0) Protein recA (Recombinase A)| Length = 378 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_STRP3 (Q8K5K0) Protein recA (Recombinase A)| Length = 378 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_STRP1 (P0C095) Protein recA (Recombinase A)| Length = 378 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_LACAC (Q5FL82) Protein recA (Recombinase A)| Length = 363 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K K +FIN + G M G + T Sbjct: 157 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGVMFGNPETT 209
>RECA_STRTR (Q9EVV7) Protein recA (Recombinase A)| Length = 379 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETT 222
>RECA_STRA5 (P65980) Protein recA (Recombinase A)| Length = 379 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_STRA3 (P65979) Protein recA (Recombinase A)| Length = 379 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETT 222
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 32.3 bits (72), Expect = 0.90 Identities = 22/81 (27%), Positives = 36/81 (44%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + G++ MS E + G AK IR + +A Sbjct: 312 KLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQA-- 369 Query: 461 IINKGKMCCLFINDLDAGAGR 523 +FI++LDA G+ Sbjct: 370 --RSRAPAIIFIDELDAIGGK 388
>RECA_STRT2 (Q5M6H2) Protein recA (Recombinase A)| Length = 384 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETT 222
>RECA_STRT1 (Q5M1Y2) Protein recA (Recombinase A)| Length = 384 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETT 222
>RECA_STRMU (P27624) Protein recA (Recombinase A)| Length = 383 Score = 32.3 bits (72), Expect = 0.90 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETT 222
>RECA_CLOBE (P42441) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 32.3 bits (72), Expect = 0.90 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGT 535 GE+ + G A+L+ Q R+ A INK +FIN L G M G+ Sbjct: 56 GEMGDSHIGLQARLMSQALRKLAGTINKTNCVAIFINQLREKLGFMFGS 104
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 32.0 bits (71), Expect = 1.2 Identities = 23/84 (27%), Positives = 40/84 (47%) Frame = +2 Query: 260 FMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ 439 F TL + P + + G G GK+ + V + G+N I + EL + GE + +RQ Sbjct: 606 FRTL-GLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQ 664 Query: 440 RYREAADIINKGKMCCLFINDLDA 511 ++ A C +F +++DA Sbjct: 665 VFQRA----KNSAPCVIFFDEVDA 684 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = +2 Query: 308 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCC 487 G G GK+ + ++ + + ++A E+ SG +GE Q+ RE D C Sbjct: 304 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES----EQKLRELFDQAVSNAPCI 359 Query: 488 LFINDLDA 511 +FI+++DA Sbjct: 360 VFIDEIDA 367
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 32.0 bits (71), Expect = 1.2 Identities = 23/86 (26%), Positives = 41/86 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 245 IKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA- 303 Query: 458 DIINKGKMCCLFINDLDAGAGRMGGT 535 K +FI+++D+ A + T Sbjct: 304 ---EKNAPAIIFIDEIDSIAPKRDKT 326
>RECA_STRPA (O85502) Protein recA (Recombinase A)| Length = 381 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETT 222
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 32.0 bits (71), Expect = 1.2 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + V + G+ +S E G A +R + +A Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA-- 249 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGGTTQ 541 C +FI+++DA GAG GG + Sbjct: 250 --KANAPCIVFIDEIDAVGRQRGAGLGGGNDE 279
>RECA_STRR6 (P0A452) Protein recA (Recombinase A)| Length = 388 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_STRPN (P0A451) Protein recA (Recombinase A)| Length = 388 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q R+ INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_CHRVI (O32377) Protein recA (Recombinase A)| Length = 347 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ I + C +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQIRMKIGVMFGSPETT 209
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/76 (26%), Positives = 36/76 (47%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GK+ V + G+N I + E+ + G + IR+ + A + K Sbjct: 736 LYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSV----KP 791 Query: 482 CCLFINDLDAGAGRMG 529 C LF ++ D+ A + G Sbjct: 792 CILFFDEFDSIAPKRG 807
>RECA_RHOBA (Q7UJJ0) Protein recA (Recombinase A)| Length = 375 Score = 31.6 bits (70), Expect = 1.5 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ I K K +FIN + G M G+ + T Sbjct: 179 GEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPETT 231
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Frame = +2 Query: 239 IVHLAKN--FMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 412 +V KN T+ K+P + + G G GK+ V + + S E + Sbjct: 354 VVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFV 413 Query: 413 GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGR 523 G A IR +REA C +FI++LD+ G+ Sbjct: 414 GVGASRIRNLFREA----KANAPCVIFIDELDSVGGK 446
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +2 Query: 254 KNFMTLPNIKVPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 406 + + LP+++ L G+ +G G GK+ + V A+ +SA L S Sbjct: 353 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 412 Query: 407 NAGEPAKLIRQRYREAADIINKGKMCCLFINDLDA 511 GE KL+R + A ++ + +FI+++D+ Sbjct: 413 YVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 443
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +2 Query: 254 KNFMTLPNIKVPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 406 + + LP+++ L G+ +G G GK+ + V A+ +SA L S Sbjct: 355 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 414 Query: 407 NAGEPAKLIRQRYREAADIINKGKMCCLFINDLDA 511 GE KL+R + A ++ + +FI+++D+ Sbjct: 415 YVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 445
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Frame = +2 Query: 302 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 ++G G GK+ + V I ++A EL GE A+L+R+ + ++ + Sbjct: 218 LYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELF----ELAREKAP 273 Query: 482 CCLFINDLDA-GAGRMGGTT 538 +FI+++DA GA RM T Sbjct: 274 SIIFIDEIDAIGARRMRDAT 293
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/81 (25%), Positives = 36/81 (44%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I P + ++G G GK+ V + I + EL GE A+++R+ + A Sbjct: 210 IDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA- 268 Query: 458 DIINKGKMCCLFINDLDAGAG 520 K C +F +++DA G Sbjct: 269 ---RTKKACIIFFDEIDAIGG 286
>RECA1_MYXXA (P48291) Protein recA 1 (Recombinase A 1)| Length = 342 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +++ C +FIN + G M G + T Sbjct: 159 GEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQIRMKIGVMFGNPETT 211
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/80 (26%), Positives = 37/80 (46%) Frame = +2 Query: 269 LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 448 LP + L++GI +G GKS + + + + + + G L G GE R R Sbjct: 256 LPTPRGLLLIGI---QGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGES----ESRLR 308 Query: 449 EAADIINKGKMCCLFINDLD 508 + D+ C L+I+++D Sbjct: 309 QMIDVAETLSPCILWIDEMD 328
>RECA_AERSA (P94190) Protein recA (Recombinase A)| Length = 353 Score = 31.2 bits (69), Expect = 2.0 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 344 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGR 523 +V + + P GE+ + G A+L+ Q R+ I C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKNANCLCIFINQIRMKIGV 200 Query: 524 MGGTTQYT 547 M G+ + T Sbjct: 201 MFGSPETT 208
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/78 (24%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 207 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 262 Query: 458 DIINKGKMCCLFINDLDA 511 + + C +FI+++DA Sbjct: 263 QLAKEKSPCIIFIDEIDA 280
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +2 Query: 287 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 397 PL++ + GG G GK QC + K G +SAGEL Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +2 Query: 287 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 397 PL++ + GG G GK QC + K G +SAGEL Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 31.2 bits (69), Expect = 2.0 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + G+ ++S E G A +R + +A Sbjct: 205 KIPKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQA-- 262 Query: 461 IINKGKMCCLFINDLDA-GAGRMGG 532 K C +FI++LDA G R G Sbjct: 263 --KKQAPCIVFIDELDAIGKSRASG 285
>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 31.2 bits (69), Expect = 2.0 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 448 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSA---------RGK 55 Query: 449 EAADIINKGKM 481 + ++I+ KG++ Sbjct: 56 KLSEIMEKGQL 66
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + + G+ +S E G A +R +++A Sbjct: 242 KIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA-- 299 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGGTTQ 541 + C +FI+++DA G G GG + Sbjct: 300 --KENAPCLVFIDEIDAVGRQRGVGYGGGNDE 329
>RECA_MYCGE (P47581) Protein recA (Recombinase A)| Length = 340 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G +E G A+++ + R I+ K C LFIN L G M G + T Sbjct: 158 GTIEEQTIGLHARMMSKGLRRIQSILPDSKTCVLFINQLREKPGVMFGNNEVT 210
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/81 (27%), Positives = 35/81 (43%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 461 IINKGKMCCLFINDLDAGAGR 523 C +FI++LD+ G+ Sbjct: 370 --KANAPCVIFIDELDSVGGK 388
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/81 (27%), Positives = 35/81 (43%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 461 IINKGKMCCLFINDLDAGAGR 523 C +FI++LD+ G+ Sbjct: 370 --KANAPCVIFIDELDSVGGK 388
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/81 (25%), Positives = 37/81 (45%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ V + I + EL GE A+++R+ + A Sbjct: 208 IEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA- 266 Query: 458 DIINKGKMCCLFINDLDAGAG 520 K C +F +++DA G Sbjct: 267 ---RTKKACLIFFDEIDAVGG 284
>RECA_AQUAE (O67905) Protein recA (Recombinase A)| Length = 345 Score = 30.8 bits (68), Expect = 2.6 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G+ A+L+ Q R+ ++K +FIN + G M G + T Sbjct: 159 GEMGEAQVGKQARLMSQALRKLKGAVHKSNTALIFINQIREKIGVMFGNPETT 211
>RECA_SYMTH (Q67NU3) Protein recA (Recombinase A)| Length = 350 Score = 30.8 bits (68), Expect = 2.6 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G A+L+ Q R+ I+K K +FIN + G M G + T Sbjct: 159 GEMGDSFVGLQARLMSQALRKLTGAISKSKAVVIFINQIREKVGVMFGNPETT 211
>RECA_MESFL (Q6F1R0) Protein recA (Recombinase A)| Length = 333 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+++ + R+ +I+K K +FIN L G M G + T Sbjct: 160 GEMSDQSIGLQARMMSKALRKLNGVISKSKTTVIFINQLREKIGIMFGNPETT 212
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 30.8 bits (68), Expect = 2.6 Identities = 29/106 (27%), Positives = 32/106 (30%), Gaps = 9/106 (8%) Frame = +1 Query: 163 PGPAEVRLRQHH-----GRAVHRAGIHG--QAHRPPRQELHDTPQHQGSSHPGYLGRQGT 321 P PA V +HH G A H + H PP P HQ HP L Q Sbjct: 256 PTPAGVSADEHHNGSGTGGGAGEADHHSTTEHHAPPSHPQQQHPHHQQHHHPHLLLPQQH 315 Query: 322 GQ--VVPV*AGVRQDGHQPHHDXXXXXXXXXXXXXXXADPAEVPRG 453 Q V P+ Q G H A A V G Sbjct: 316 HQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAG 361
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 30.8 bits (68), Expect = 2.6 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 ++P + + G G GK+ V + G+ +S + G A +R + A Sbjct: 197 RIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 254 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 255 --KKNAPCIIFIDEIDAVGRQRGAGLGGG 281
>KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 30.8 bits (68), Expect = 2.6 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 448 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKAKIIFVVGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSA---------RGK 55 Query: 449 EAADIINKGKM 481 + ++I+ KG++ Sbjct: 56 KLSEIMEKGQL 66
>RECA_LACHE (Q02348) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGG 532 GE+ + G A+L+ Q R+ + I+K K +FIN + G M G Sbjct: 56 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGIMFG 103
>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 548 Score = 30.8 bits (68), Expect = 2.6 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +2 Query: 155 YISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSF 334 Y SQ + YD M Y+ M+ H+ T+P VP+I G+ G GQ + Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387 Query: 335 QC 340 QC Sbjct: 388 QC 389
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 30.8 bits (68), Expect = 2.6 Identities = 18/78 (23%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 ++ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 201 VRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 256 Query: 458 DIINKGKMCCLFINDLDA 511 + + C +FI+++DA Sbjct: 257 QLAKEKSPCIIFIDEIDA 274
>Y1660_MYCLE (O69468) Hypothetical protein ML1660| Length = 217 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = -1 Query: 346 QLTLERLALSLASPDTQDERNLDVGECHEVLGEVDDELVHECRRDVQPVHGVVEVVLPQ 170 ++ LE + + +P D R V E V G V V EC R + VHG V+V L Q Sbjct: 59 RIGLELVVIEWGAPINLDLRVESVSEDVLVAGTVTAPTVSECVRCLTAVHGHVQVTLNQ 117
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 30.4 bits (67), Expect = 3.4 Identities = 21/78 (26%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 IK P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 241 IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC- 299 Query: 458 DIINKGKMCCLFINDLDA 511 K + LFI+++DA Sbjct: 300 ---EKNQPAILFIDEIDA 314
>RECA_STAHJ (Q4L5Y8) Protein recA (Recombinase A)| Length = 348 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/78 (23%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 ++ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 202 VRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 257 Query: 458 DIINKGKMCCLFINDLDA 511 + + C +FI+++DA Sbjct: 258 QLAKEKAPCIIFIDEIDA 275
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 30.4 bits (67), Expect = 3.4 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 12/122 (9%) Frame = +2 Query: 212 IAPAFMDKLIVHLAKNFMTLPN------IKVPLILGIWGGKGQGKSFQCELVFAKMGINP 373 +A A KL + +F+ P+ K+P + G G GK+ V + G+ Sbjct: 252 VAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPF 311 Query: 374 IMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM-CCLFINDLDA-----GAGRMGGT 535 +A E G A +R + +A K K C +FI+++DA GAG GG Sbjct: 312 FSCAASEFVELFVGVGASRVRDLFEKA-----KSKAPCIVFIDEIDAVGRQRGAGMGGGN 366 Query: 536 TQ 541 + Sbjct: 367 DE 368
>RECA_STAES (Q8CPF4) Protein recA (Recombinase A)| Length = 349 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAEQ (Q5HPQ6) Protein recA (Recombinase A)| Length = 349 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_THEAQ (P48296) Protein recA (Recombinase A)| Length = 340 Score = 30.4 bits (67), Expect = 3.4 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +++K +FIN + G M G + T Sbjct: 156 GEMGDQHVGLQARLMSQALRKLTAVLSKSNTAAIFINQVREKVGVMYGNPETT 208
>RECA_ZYMMO (Q9X5D8) Protein recA (Recombinase A)| Length = 339 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ IN+ + +FIN + G M G + T Sbjct: 154 GEMGDSHVGLQARLMSQALRKITGSINRSQTLVIFINQVRMKIGVMYGNPETT 206
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 30.4 bits (67), Expect = 3.4 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 12/122 (9%) Frame = +2 Query: 212 IAPAFMDKLIVHLAKNFMTLPN------IKVPLILGIWGGKGQGKSFQCELVFAKMGINP 373 +A A KL + +F+ P+ K+P + G G GK+ V + G+ Sbjct: 264 VAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPF 323 Query: 374 IMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM-CCLFINDLDA-----GAGRMGGT 535 +A E G A +R + +A K K C +FI+++DA GAG GG Sbjct: 324 FSCAASEFVELFVGVGASRVRDLFEKA-----KSKAPCIVFIDEIDAVGRQRGAGMGGGN 378 Query: 536 TQ 541 + Sbjct: 379 DE 380
>RECA_STAAW (P68846) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAU (P68845) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAS (Q6G9S8) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAR (Q6GHF0) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAN (P68844) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAM (P68843) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAC (Q5HGE6) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ + I+K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_NOCFA (Q5YT00) Protein recA (Recombinase A)| Length = 347 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N +FIN L G M G+ + T Sbjct: 159 GEMGDSHVGLQARLMSQALRKMTSALNNSGTTAIFINQLREKIGVMFGSPETT 211
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 30.4 bits (67), Expect = 3.4 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 12/122 (9%) Frame = +2 Query: 212 IAPAFMDKLIVHLAKNFMTLPN------IKVPLILGIWGGKGQGKSFQCELVFAKMGINP 373 +A A KL + +F+ P+ K+P + G G GK+ V + G+ Sbjct: 255 VAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPF 314 Query: 374 IMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM-CCLFINDLDA-----GAGRMGGT 535 +A E G A +R + +A K K C +FI+++DA GAG GG Sbjct: 315 FSCAASEFVELFVGVGASRVRDLFEKA-----KSKAPCIVFIDEIDAVGRQRGAGMGGGN 369 Query: 536 TQ 541 + Sbjct: 370 DE 371
>RECA_MAGMG (P16034) Protein recA (Recombinase A)| Length = 344 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ ++K K +FIN + G M G + T Sbjct: 154 GEMGDNHMGLHARLMSQALRKLTGSVSKSKTIVIFINQIRMKIGVMFGNPETT 206
>CLCN2_RAT (P35525) Chloride channel protein 2 (ClC-2)| Length = 907 Score = 24.6 bits (52), Expect(2) = 4.3 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = +1 Query: 220 GIHGQAHRPPRQELHDTPQHQGSSHPGYLG 309 G HGQ H+P + L P + S G G Sbjct: 692 GAHGQTHKPLKPALKRGPSNATSLQEGTTG 721 Score = 23.9 bits (50), Expect(2) = 4.3 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +2 Query: 362 GINPIMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM 481 G P+ + ELE + + KL R R A+D +GKM Sbjct: 736 GSPPLESTTSELEKSESCDKRKLKRVRISLASDSDLEGKM 775
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 30.0 bits (66), Expect = 4.5 Identities = 21/81 (25%), Positives = 37/81 (45%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ V + I + EL GE A+++R+ + A Sbjct: 205 IEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA- 263 Query: 458 DIINKGKMCCLFINDLDAGAG 520 K C +F +++DA G Sbjct: 264 ---RTKKACLIFFDEIDAIGG 281
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 30.0 bits (66), Expect = 4.5 Identities = 21/81 (25%), Positives = 37/81 (45%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ V + I + EL GE A+++R+ + A Sbjct: 205 IEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA- 263 Query: 458 DIINKGKMCCLFINDLDAGAG 520 K C +F +++DA G Sbjct: 264 ---RTKKACLIFFDEIDAIGG 281
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/78 (25%), Positives = 37/78 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC- 298 Query: 458 DIINKGKMCCLFINDLDA 511 K LFI+++DA Sbjct: 299 ---EKNSPAILFIDEIDA 313
>RECA_VIBVY (Q7MHR4) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 4.5 Identities = 23/110 (20%), Positives = 46/110 (41%) Frame = +2 Query: 218 PAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 397 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTGEQA-LEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 398 ESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 + G A+++ Q R+ + + C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_VIBVU (Q8DC51) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 4.5 Identities = 23/110 (20%), Positives = 46/110 (41%) Frame = +2 Query: 218 PAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 397 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTGEQA-LEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 398 ESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 + G A+++ Q R+ + + C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_STRAG (Q9AGW0) Protein recA (Recombinase A)| Length = 379 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+++ Q + INK K +FIN L G M G + T Sbjct: 170 GDIGDSHVGLQARMMMQAMHKLTASINKTKTIAIFINQLREKVGVMFGNPETT 222
>RECA_MYCSM (Q59560) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N +FIN L G M G+ + T Sbjct: 159 GEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMFGSPETT 211
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 30.0 bits (66), Expect = 4.5 Identities = 21/81 (25%), Positives = 37/81 (45%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ V + I + EL GE A+++R+ + A Sbjct: 206 IEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA- 264 Query: 458 DIINKGKMCCLFINDLDAGAG 520 K C +F +++DA G Sbjct: 265 ---RTKKACLIFFDEIDAIGG 282
>RECA_MYCPA (P62219) Protein recA (Recombinase A)| Length = 350 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N +FIN L G M G+ + T Sbjct: 158 GEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMFGSPETT 210
>KAD1_PIG (P00571) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 448 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSA---------RGK 55 Query: 449 EAADIINKGKM 481 ++I+ KG++ Sbjct: 56 MLSEIMEKGQL 66
>KAD1_BOVIN (P00570) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 448 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSA---------RGK 55 Query: 449 EAADIINKGKM 481 ++I+ KG++ Sbjct: 56 MLSEIMEKGQL 66
>RECA_VIBCH (P45383) Protein recA (Recombinase A)| Length = 354 Score = 30.0 bits (66), Expect = 4.5 Identities = 23/110 (20%), Positives = 46/110 (41%) Frame = +2 Query: 218 PAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 397 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDELLVSQPDTGEQA-LEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 398 ESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 + G A+++ Q R+ + + C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 30.0 bits (66), Expect = 4.5 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = +2 Query: 269 LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 448 LP K L++GI +G GKS + + + + + + G L G GE +RQ + Sbjct: 272 LPIPKGLLLVGI---QGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQ 328 Query: 449 EAADIINKGKMCCLFINDLD 508 A I C L+I+++D Sbjct: 329 FAETI----SPCILWIDEID 344
>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)| (ATP-AMP transphosphorylase) Length = 210 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +2 Query: 257 NFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 397 N L VP+ I GG G GK QC+ + AK G+ +S+G+L Sbjct: 11 NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54
>RECA_VIBAN (P26348) Protein recA (Recombinase A)| Length = 348 Score = 29.6 bits (65), Expect = 5.9 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+++ Q R+ + + C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_PROAC (Q6A902) Protein recA (Recombinase A)| Length = 348 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N +FIN L G M G+ + T Sbjct: 158 GEMGDSHVGLQARLMSQALRKMTGALNAAGTTAIFINQLREKIGVMFGSPETT 210
>RECA_AQUPY (P33542) Protein recA (Recombinase A)| Length = 348 Score = 29.6 bits (65), Expect = 5.9 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G+ A+L+ Q R+ +++ +FIN + G M G + T Sbjct: 162 GEMGEAQVGKQARLMSQALRKLKGAVHRSNTALIFINQIREKIGVMFGNPETT 214
>RECA_AMYMD (Q9REV6) Protein recA (Recombinase A)| Length = 348 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N +FIN L G M G+ + T Sbjct: 158 GEMGDSHVGLQARLMSQALRKMTGAMNNSGTTAIFINQLREKIGVMFGSPETT 210
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/78 (25%), Positives = 37/78 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI+++D+ Sbjct: 297 ---EKNAPSIIFIDEIDS 311
>RECA_AGRT5 (P33156) Protein recA (Recombinase A)| Length = 363 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G A+L+ Q R+ I+K K +FIN + G M G+ + T Sbjct: 168 GEMGDSLPGLQARLMSQALRKLTASISKSKCMVIFINQIRMKIGVMFGSPETT 220
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 29.6 bits (65), Expect = 5.9 Identities = 21/81 (25%), Positives = 37/81 (45%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ V + I + EL GE A+++R+ + A Sbjct: 205 IEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMA- 263 Query: 458 DIINKGKMCCLFINDLDAGAG 520 K C +F +++DA G Sbjct: 264 ---RTKKACLIFFDEIDAIGG 281
>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa| protein) (ORF 2) Length = 142 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -2 Query: 366 MPILANTSSHWNDLPCPL-PPQIPRMRGTLMLGSVMKFLARWTMSLSMN 223 M I++ TSS W P PL PPQ+P + +++ + + T S S N Sbjct: 49 MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSASPN 96
>RECA_RHOPA (Q9XBC1) Protein recA (Recombinase A)| Length = 349 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G A+L+ Q R+ INK +FIN + G M G+ + T Sbjct: 155 GEMGDALPGLQARLMSQALRKLTASINKSNTMVIFINQIRMKIGVMYGSPETT 207
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/78 (25%), Positives = 37/78 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI+++D+ Sbjct: 297 ---EKNAPSIIFIDEIDS 311
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/78 (24%), Positives = 38/78 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 197 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 252 Query: 458 DIINKGKMCCLFINDLDA 511 + + C +FI+++DA Sbjct: 253 LLAKEKSPCIIFIDEIDA 270
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 29.6 bits (65), Expect = 5.9 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 6/93 (6%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 457 K+P + G G GK+ + + + I +S E LE PA R R+ Sbjct: 339 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 393 Query: 458 DIINKGKMCCLFINDLDA-----GAGRMGGTTQ 541 + K C LFI+++DA G G GG ++ Sbjct: 394 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSE 426
>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC| 2.7.4.3) (ATP-AMP transphosphorylase) Length = 283 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +2 Query: 287 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 397 PL + I G GK QCEL+ K G+ + +SAG+L Sbjct: 64 PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDL 98
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/78 (25%), Positives = 37/78 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>RECA_LACDE (Q02347) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGG 532 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDSHVGLQARLMSQALRKLSGTIAKTKTIAIFINQIREKVGVMFG 103
>KAD1_MOUSE (Q9R0Y5) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/68 (27%), Positives = 33/68 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K I+ + GG G GK QCE + K G +S G+L + +R ++ + Sbjct: 5 LKKAKIIFVVGGPGSGKGTQCEKIVQKYGYT--HLSTGDLLRAEVSSGS----ERGKKLS 58 Query: 458 DIINKGKM 481 I+ KG++ Sbjct: 59 AIMEKGEL 66
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + + +S + G A +R + +A Sbjct: 182 KIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 239 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 240 --KKNAPCLIFIDEIDAVGRQRGAGLGGG 266
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 29.6 bits (65), Expect = 5.9 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 12/122 (9%) Frame = +2 Query: 212 IAPAFMDKLIVHLAKNFMTLPN------IKVPLILGIWGGKGQGKSFQCELVFAKMGINP 373 +A A KL + +F+ P+ K+P + G G GK+ V + G+ Sbjct: 232 VAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPF 291 Query: 374 IMMSAGELESGNAGEPAKLIRQRYREAADIINKGKM-CCLFINDLDA-----GAGRMGGT 535 +A E G A +R + A K K C +FI+++DA GAG GG Sbjct: 292 FSCAASEFVELFVGVGASRVRHLFENA-----KSKAPCIVFIDEIDAVGRQRGAGLGGGN 346 Query: 536 TQ 541 + Sbjct: 347 DE 348
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMG 364 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>RECA_VIBPA (Q87LR1) Protein recA (Recombinase A)| Length = 347 Score = 29.6 bits (65), Expect = 5.9 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+++ Q R+ + + C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_MYCTU (P0A5U4) Protein recA (Recombinase A) [Contains: Endonuclease| PI-MtuI (EC 3.1.-.-) (Mtu recA intein)] Length = 790 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N +FIN L G M G+ + T Sbjct: 158 GEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRDKIGVMFGSPETT 210
>RECA_MYCBO (P0A5U5) Protein recA (Recombinase A) [Contains: Endonuclease| PI-MboI (EC 3.1.-.-) (Mbo recA intein)] Length = 790 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+L+ Q R+ +N +FIN L G M G+ + T Sbjct: 158 GEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRDKIGVMFGSPETT 210
>HNF6_RAT (P70512) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +1 Query: 268 TPQHQGSSHPGYLGRQGTGQVVPV*AG-VRQDGHQPHH 378 TP + HP LGR G + P AG V +G PHH Sbjct: 214 TPNDFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHH 251
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/78 (25%), Positives = 37/78 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 29.6 bits (65), Expect = 5.9 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 6/93 (6%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 457 K+P + G G GK+ + + + I +S E LE PA R R+ Sbjct: 338 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 392 Query: 458 DIINKGKMCCLFINDLDA-----GAGRMGGTTQ 541 + K C LFI+++DA G G GG ++ Sbjct: 393 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSE 425
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/65 (33%), Positives = 25/65 (38%) Frame = +1 Query: 187 RQHHGRAVHRAGIHGQAHRPPRQELHDTPQHQGSSHPGYLGRQGTGQVVPV*AGVRQDGH 366 R H G G HG HRP HD P H+G H G + G P G GH Sbjct: 831 RPHEGPG--HGGPHG--HRP-----HDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGH 881 Query: 367 QPHHD 381 H+ Sbjct: 882 DGGHN 886
>KAD_CYPCA (P12115) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 193 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 IK I+ + GG G GK QCE + K G +S+G+L + +R ++ Sbjct: 4 IKDAKIVFVVGGPGSGKGTQCEKIVEKYGYT--HLSSGDLLRAEVASGS----ERGKQLQ 57 Query: 458 DIINKGKM 481 I+ KG++ Sbjct: 58 AIMQKGEL 65
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/78 (25%), Positives = 37/78 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 458 DIINKGKMCCLFINDLDA 511 K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>RECA_PSEOL (Q9R9U2) Protein recA (Recombinase A)| Length = 348 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/53 (26%), Positives = 24/53 (45%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+++ Q R+ + C+FIN + G M G + T Sbjct: 156 GEIGDSHVGLAARMMSQAMRKITGNLKNSNTMCIFINQIRMKIGVMFGNPETT 208
>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1060 Score = 29.3 bits (64), Expect = 7.7 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 3/92 (3%) Frame = +2 Query: 14 YADRWKG-LAYDISDDQQDITRGKGIVDSLFQAPMGDGT--HEAILSSYEYISQGLRKYD 184 YAD +G LAY+++D + D +F A G G HEA E S+ KYD Sbjct: 825 YADSNRGKLAYNLADHANLLNYYS---DDIFMASSGGGFAYHEA-----EDYSE-TEKYD 875 Query: 185 FDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNI 280 F+ + G+ + P + L NF L + Sbjct: 876 FEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907
>RECA_PHOPR (Q6LMU2) Protein recA (Recombinase A)| Length = 352 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/53 (26%), Positives = 24/53 (45%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ + G A+++ Q R+ + C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKNANCMCIFINQIRMKIGVMFGNPETT 208
>RECA_BRAJA (Q89I84) Protein recA (Recombinase A)| Length = 362 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G A+L+ Q R+ INK +FIN + G M G+ + T Sbjct: 168 GEMGDALPGLQARLMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETT 220
>RECA_CAUCR (Q9A9A7) Protein recA (Recombinase A)| Length = 356 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE+ G A+L+ Q R+ INK +FIN + G M G+ + T Sbjct: 168 GEMGDSLPGLQARLMSQALRKLTASINKANTIVIFINQIRHKIGVMYGSPETT 220
>RECA_BDEBA (P62212) Protein recA (Recombinase A)| Length = 377 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 G++ + G A+L+ Q R+ IN+ +FIN + G M G + T Sbjct: 167 GDMGDSHVGLQARLMSQALRKLTAAINRSNTLVIFINQIRMKIGVMFGNPETT 219
>UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine| monophosphokinase 1) (Cytidine monophosphokinase 1) Length = 277 Score = 29.3 bits (64), Expect = 7.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 287 PLILGIWGGKGQGKSFQCELVFAKMGINPI 376 P ++G+ GG GKS CE + +G N + Sbjct: 23 PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52
>UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine| monophosphokinase 1) (Cytidine monophosphokinase 1) Length = 277 Score = 29.3 bits (64), Expect = 7.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 287 PLILGIWGGKGQGKSFQCELVFAKMGINPI 376 P ++G+ GG GKS CE + +G N + Sbjct: 23 PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52
>RECA_STRSL (P49987) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 29.3 bits (64), Expect = 7.7 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGG 532 G+ + G A+++ Q R+ + INK K +FIN L G M G Sbjct: 56 GDSGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFG 103
>MYMS_BOVIN (P80473) Myomesin (190 kDa titin-associated protein) (Fragments)| Length = 340 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -1 Query: 547 RVLRRPAHPARAGVQVVDEEAAHLALVDNVGRLAVPLPDQLGRLAGVAALQLTG 386 R+ RP+ P + V +EE + A +N R+ LP + AGV + TG Sbjct: 181 RLKSRPSAPXTGQIIVTEEEPSEEAGTENXQRVNTELPVKXSNNAGVXEPEETG 234
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 29.3 bits (64), Expect = 7.7 Identities = 19/61 (31%), Positives = 21/61 (34%) Frame = -3 Query: 365 CPSWRTPAHTGTTCPVPCLPRYPG*EEP*CXXXXXXXXXXXX*ACP*MPARCTARPWCCR 186 CP P CP PC P +P C CP P C A+P CC Sbjct: 47 CPP--KPCPCPPPCPCPCPATCPCPLKPPCCPQKCSCCPKKCTCCP-QPPPCCAQPTCCS 103 Query: 185 S 183 S Sbjct: 104 S 104
>KAD1_CHICK (P05081) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 29.3 bits (64), Expect = 7.7 Identities = 20/73 (27%), Positives = 34/73 (46%) Frame = +2 Query: 263 MTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQR 442 M+ +K I+ + GG G GK QCE + K G +S G+L + +R Sbjct: 1 MSTEKLKHHKIIFVVGGPGSGKGTQCEKIVHKYGYT--HLSTGDLLRAEVSSGS----ER 54 Query: 443 YREAADIINKGKM 481 ++ I+ KG++ Sbjct: 55 GKKLQAIMEKGEL 67
>HNF6_MOUSE (O08755) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 29.3 bits (64), Expect = 7.7 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +1 Query: 268 TPQHQGSSHPGYLGRQGTGQVVPV*AG-VRQDGHQPHH 378 TP + HP LGR G + P AG V +G PHH Sbjct: 214 TPNGFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHH 251
>HNF6_HUMAN (Q9UBC0) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 29.3 bits (64), Expect = 7.7 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +1 Query: 268 TPQHQGSSHPGYLGRQGTGQVVPV*AG-VRQDGHQPHH 378 TP + HP LGR G + P AG V +G PHH Sbjct: 214 TPNGFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHH 251
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 K+P + + G G GK+ + + + + +S + G A +R + A Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHA-- 240 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 460 ++P + + G G GK+ + + G+ +S + G A +R + A Sbjct: 192 RIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 249 Query: 461 IINKGKMCCLFINDLDA-----GAGRMGG 532 K C +FI+++DA GAG GG Sbjct: 250 --KKNAPCLIFIDEIDAVGRQRGAGLGGG 276
>RECA_MYCMO (Q6KHC9) Protein recA (Recombinase A)| Length = 331 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYT 547 GE++ G A+L+ + R+ +NK K +FIN + G G + T Sbjct: 152 GEMKDQVMGAQARLMSKALRKITGSLNKSKTTVIFINQIREKIGTFFGNPETT 204
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/64 (34%), Positives = 24/64 (37%) Frame = +1 Query: 187 RQHHGRAVHRAGIHGQAHRPPRQELHDTPQHQGSSHPGYLGRQGTGQVVPV*AGVRQDGH 366 R H G G HG HRP HD P H+G H G + G P G GH Sbjct: 846 RPHEGPG--HGGPHG--HRP-----HDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGH 896 Query: 367 QPHH 378 H Sbjct: 897 DGGH 900
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Frame = +1 Query: 196 HGRAVHRA-GIHGQAHRPPRQEL--HDTPQHQGSSHPGYLGRQGTG 324 HG H G G HR P E HD P H G H G+ G G Sbjct: 858 HGHRPHDVPGHRGHDHRGPPHEHRGHDGPGHGGGGHRGHDGGHSHG 903
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/64 (34%), Positives = 24/64 (37%) Frame = +1 Query: 187 RQHHGRAVHRAGIHGQAHRPPRQELHDTPQHQGSSHPGYLGRQGTGQVVPV*AGVRQDGH 366 R H G G HG HRP HD P H+G H G + G P G GH Sbjct: 846 RPHEGPG--HGGPHG--HRP-----HDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGH 896 Query: 367 QPHH 378 H Sbjct: 897 DGGH 900
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Frame = +2 Query: 266 TLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 445 T+ K+P + + G G GK+ + + + + ++ E G A +R + Sbjct: 212 TIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLF 271 Query: 446 REAADIINKGKMCCLFINDLDA-----GAGRMGGTTQ 541 ++A++ C +FI+++DA GAG GG + Sbjct: 272 KKASE----NAPCIVFIDEIDAVGRERGAGVGGGNDE 304
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 28.9 bits (63), Expect = 10.0 Identities = 23/96 (23%), Positives = 31/96 (32%), Gaps = 4/96 (4%) Frame = +1 Query: 220 GIHGQAHRPPRQELHDTPQHQGSSHPGYLGRQGTGQVVPV*AGVRQDGHQP----HHDXX 387 G HG +HR P +E D G + T V R+ GHQP +H Sbjct: 59 GHHGHSHRSPGEENEDVSMENGHHFWSHRDHGETDDEVS-----REYGHQPQGHRYHSPE 113 Query: 388 XXXXXXXXXXXXXADPAEVPRGGRHYQQGQDVLPLH 495 + P G H + G + L H Sbjct: 114 AGDESVSEEGVHREQARQAPGHGGHGEAGAEDLAEH 149
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 28.9 bits (63), Expect = 10.0 Identities = 21/78 (26%), Positives = 37/78 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P ++G G GK+ A+ + ++A +L GE AKL+ R+A Sbjct: 212 IRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLV----RDAF 267 Query: 458 DIINKGKMCCLFINDLDA 511 + + +FI++LDA Sbjct: 268 ALAKEKAPTIIFIDELDA 285
>GLND_NEIMB (Q9JZB4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 852 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 Query: 365 INPIMMSAGELESGNAGEPAKLIRQRYREAADIINK 472 + + +AG +GN G P L +R +EAAD++ + Sbjct: 582 LESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTR 617
>GLND_NEIMA (Q9JUC9) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 852 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 Query: 365 INPIMMSAGELESGNAGEPAKLIRQRYREAADIINK 472 + + +AG +GN G P L +R +EAAD++ + Sbjct: 582 LESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTR 617
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 28.9 bits (63), Expect = 10.0 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ + V + I + EL G+ +KL+ RE Sbjct: 190 IEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIF 245 Query: 458 DIINKGKMCCLFINDLDAGAGR 523 ++ K +FI++LD+ A R Sbjct: 246 EMARKKAPSIIFIDELDSIAAR 267
>DHA2_STAAW (Q8NW54) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/55 (23%), Positives = 29/55 (52%) Frame = +2 Query: 131 EAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLI 295 E + S Y Y +GL + + + + + A +D+ ++ +A + LP+ +PL+ Sbjct: 75 EPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQLPDRSLPLL 129
>DHA2_STAAS (Q6G8L8) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/55 (23%), Positives = 29/55 (52%) Frame = +2 Query: 131 EAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLI 295 E + S Y Y +GL + + + + + A +D+ ++ +A + LP+ +PL+ Sbjct: 75 EPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQLPDRSLPLL 129
>DHA2_STAAR (Q6GFZ8) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/55 (23%), Positives = 29/55 (52%) Frame = +2 Query: 131 EAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLI 295 E + S Y Y +GL + + + + + A +D+ ++ +A + LP+ +PL+ Sbjct: 75 EPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQLPDRSLPLL 129
>DHA2_STAAC (Q5HF65) Alanine dehydrogenase 2 (EC 1.4.1.1)| Length = 372 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/55 (23%), Positives = 29/55 (52%) Frame = +2 Query: 131 EAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLI 295 E + S Y Y +GL + + + + + A +D+ ++ +A + LP+ +PL+ Sbjct: 75 EPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQLPDRSLPLL 129
>HISZ_BACSU (O34459) ATP phosphoribosyltransferase regulatory subunit| Length = 391 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -1 Query: 511 GVQVVDEEAAHLALVDNVGRLAVPLPDQLGRLAGVAALQLTGAHH 377 GVQ EE L+D G+ V PD G +A VAA +L H Sbjct: 52 GVQSAIEEQQLFKLLDQDGKTLVLRPDMTGPIARVAASKLLKHGH 96
>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) (UMP/CMP kinase) Length = 202 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = +2 Query: 281 KVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYRE 451 K P ++ + GG G GK QC + G +SAG+L E + E +I+ +E Sbjct: 12 KKPTVIFVLGGPGSGKGTQCAYIVEHYGYT--HLSAGDLLRAEIKSGSENGTMIQNMIKE 69
>RECA_LEUME (Q02349) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +2 Query: 389 GELESGNAGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGG 532 GE+ + G A+L+ Q R+ A +N+ +FIN + G M G Sbjct: 56 GEMGDSHVGLQARLMSQALRKLAGTLNRTGTIAIFINQIREKIGVMFG 103
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 28.9 bits (63), Expect = 10.0 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 278 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 457 I+ P + ++G G GK+ + V + I + EL G+ +KL+ RE Sbjct: 190 IEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIF 245 Query: 458 DIINKGKMCCLFINDLDAGAGR 523 ++ K +FI++LD+ A R Sbjct: 246 EMARKKAPSIIFIDELDSIAAR 267 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,779,758 Number of Sequences: 219361 Number of extensions: 1695025 Number of successful extensions: 6558 Number of sequences better than 10.0: 248 Number of HSP's better than 10.0 without gapping: 6265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6536 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
