ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63k11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 1035 bits (522), Expect = 0.0 Identities = 533/536 (99%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 15 atgcggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2929 atgcggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactc 2988 Query: 75 gggggaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgagg 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2989 gggggaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgagg 3048 Query: 135 ccatcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaaca 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3049 ccatcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaaca 3108 Query: 195 ccatggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgcca 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3109 ccatggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgcca 3168 Query: 255 agaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggca 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3169 agaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggca 3228 Query: 315 agggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaacccca 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3229 agggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaacccca 3288 Query: 375 tcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatcc 434 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3289 tcatgatgagcgccggtgagctggagagcggcaa---cggcgagccggccaagctgatcc 3345 Query: 435 ggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttca 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3346 ggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttca 3405 Query: 495 tcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3406 tcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 3461 Score = 256 bits (129), Expect = 7e-65 Identities = 228/261 (87%) Strand = Plus / Plus Query: 25 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 84 |||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||| || Sbjct: 5662 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 5721 Query: 85 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 144 |||||||||||| || |||||||| |||| ||| ||||||||||||||||| |||| || Sbjct: 5722 catcgtggactcgctcttccaggcgcccacggggcacggcacccacgaggccgtcctcag 5781 Query: 145 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 204 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5782 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 5841 Query: 205 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 264 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 5842 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 5901 Query: 265 gacactccccaacatcaaggt 285 ||| || |||||||||||||| Sbjct: 5902 gaccctgcccaacatcaaggt 5922 Score = 161 bits (81), Expect = 3e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||||||||||| ||||| ||||||||||| || ||||| || ||||| |||||||| Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 ||| ||||| ||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||||||||||| || ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 6584 Score = 103 bits (52), Expect = 6e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 290 ctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtg 349 |||||| |||||||||||||||||||||| || || || || |||||||||||||| ||| Sbjct: 6078 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 6137 Query: 350 ttcgccaagatgggcatcaa 369 |||||||||||||||||||| Sbjct: 6138 ttcgccaagatgggcatcaa 6157
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 1035 bits (522), Expect = 0.0 Identities = 533/536 (99%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 15 atgcggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 atgcggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactc 419 Query: 75 gggggaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgagg 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gggggaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgagg 479 Query: 135 ccatcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaaca 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 ccatcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaaca 539 Query: 195 ccatggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgcca 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 ccatggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgcca 599 Query: 255 agaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggca 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 agaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggca 659 Query: 315 agggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaacccca 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 agggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaacccca 719 Query: 375 tcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatcc 434 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 720 tcatgatgagcgccggtgagctggagagcggcaa---cggcgagccggccaagctgatcc 776 Query: 435 ggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttca 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 ggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttca 836 Query: 495 tcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 tcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 892
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 920 bits (464), Expect = 0.0 Identities = 512/528 (96%) Strand = Plus / Plus Query: 23 cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 82 |||||||||||||| || ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 215 cggtggaagggtctcgcttacgacatctccgatgaccagcaggacatcacgagggggaaa 274 Query: 83 ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatccta 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctg 334 Query: 143 agctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggac 202 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 335 agctcctacgagtacatcagccagggcctgcgcaagtacgacttcgacaacaccatggac 394 Query: 203 gggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttc 262 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gggctgtacatcgccccggcgttcatggacaagctcatcgtccacctcgccaagaacttc 454 Query: 263 atgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacag 322 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 455 atgacactccccaacatcaaggtccctctcatcctgggtatctggggaggcaagggacag 514 Query: 323 ggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatg 382 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 ggcaagtcgttccagtgcgagctggtgttcgccaagatgggcatcaaccccatcatgatg 574 Query: 383 agcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagagg 442 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 agcgccggagagctggagagcggcaacgccggcgagccggccaagctgatccggcagagg 634 Query: 443 taccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgac 502 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 635 taccgcgaggctgccgacattatcaagaagggcaagatgtgctgcctcttcatcaacgac 694 Query: 503 ctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 695 ctggacgccggcgcggggcggatgggcgggacgacgcagtacacggtg 742
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 583 bits (294), Expect = e-163 Identities = 465/522 (89%) Strand = Plus / Plus Query: 25 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 84 ||||||||| || |||||||| ||||| |||||||||||||||||||| |||| || || Sbjct: 262 gtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggtaaggg 321 Query: 85 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 144 ||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||| || Sbjct: 322 tatcgtcgactccctgttccaggcgcccatgggcgatggcacccacgaggccgtcctcag 381 Query: 145 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 204 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || Sbjct: 382 ctcctacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatgggagg 441 Query: 205 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 264 | |||||||| ||||| ||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 442 cttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaacttcat 501 Query: 265 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 324 ||| || |||||||||||| | || |||||| |||||||||||||||| ||||| ||||| Sbjct: 502 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggtcaggg 561 Query: 325 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 384 || || |||||||||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 562 gaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgatgag 621 Query: 385 cgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggta 444 ||||| ||||||||||||||||||||||| ||||| |||||||| ||| ||||| |||| Sbjct: 622 tgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcagcggta 681 Query: 445 ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 504 ||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 682 ccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacgacct 741 Query: 505 ggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||||||||||||| |||||||||||||| || |||||||| Sbjct: 742 cgacgccggcgcgggtcggatgggcgggaccacccagtacac 783
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 563 bits (284), Expect = e-157 Identities = 462/522 (88%) Strand = Plus / Plus Query: 25 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 84 ||||||||| || |||||||| ||||| |||||||||||||||||||| |||| || || Sbjct: 252 gtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggtaaggg 311 Query: 85 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 144 ||||| |||||| |||||||||| ||||||||||| || |||||||||||| |||| || Sbjct: 312 tatcgtcgactccttgttccaggcgcccatgggcgatggnacccacgaggccgtcctcag 371 Query: 145 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 204 ||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| || Sbjct: 372 ctcntacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatgggagg 431 Query: 205 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 264 | |||||||| ||||| ||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 432 cttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaacttcat 491 Query: 265 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 324 ||| || |||||||||||| | || |||||| |||||||||||||||| ||||| ||||| Sbjct: 492 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggtcaggg 551 Query: 325 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 384 || || |||||||||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 552 gaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgatgag 611 Query: 385 cgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggta 444 ||||| ||||||||||||||||||||||| ||||| |||||||| ||| ||||| |||| Sbjct: 612 tgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcagcggta 671 Query: 445 ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 504 ||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 672 ccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacgacct 731 Query: 505 ggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||||||||||||| |||||||||||||| || |||||||| Sbjct: 732 cgacgccggcgcgggtcggatgggcgggaccacccagtacac 773
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 547 bits (276), Expect = e-152 Identities = 468/532 (87%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 203 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 262 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 263 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 322 Query: 139 cctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccat 198 ||| ||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 323 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 382 Query: 199 ggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaa 258 || || | |||||||| || || ||||||||||||||| |||||||| || ||||||| Sbjct: 383 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 442 Query: 259 cttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaaggg 318 ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 443 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 502 Query: 319 acagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcat 378 ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 503 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 562 Query: 379 gatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggca 438 |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 563 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 622 Query: 439 gaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaa 498 | ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 623 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 682 Query: 499 cgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||| |||||||| || || || || ||||| || || || |||||||||||| Sbjct: 683 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 734
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 547 bits (276), Expect = e-152 Identities = 468/532 (87%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 240 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 299 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 300 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 359 Query: 139 cctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccat 198 ||| ||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 360 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 419 Query: 199 ggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaa 258 || || | |||||||| || || ||||||||||||||| |||||||| || ||||||| Sbjct: 420 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 479 Query: 259 cttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaaggg 318 ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 480 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 539 Query: 319 acagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcat 378 ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 540 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 599 Query: 379 gatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggca 438 |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 600 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 659 Query: 439 gaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaa 498 | ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 660 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 719 Query: 499 cgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||| |||||||| || || || || ||||| || || || |||||||||||| Sbjct: 720 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 771
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 547 bits (276), Expect = e-152 Identities = 468/532 (87%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 239 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 298 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 299 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 358 Query: 139 cctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccat 198 ||| ||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 359 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 418 Query: 199 ggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaa 258 || || | |||||||| || || ||||||||||||||| |||||||| || ||||||| Sbjct: 419 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 478 Query: 259 cttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaaggg 318 ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 479 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 538 Query: 319 acagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcat 378 ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 539 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 598 Query: 379 gatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggca 438 |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 599 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 658 Query: 439 gaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaa 498 | ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 659 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 718 Query: 499 cgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||| |||||||| || || || || ||||| || || || |||||||||||| Sbjct: 719 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 770
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 547 bits (276), Expect = e-152 Identities = 468/532 (87%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 23 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 82 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 83 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 142 Query: 139 cctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccat 198 ||| ||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 143 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 202 Query: 199 ggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaa 258 || || | |||||||| || || ||||||||||||||| |||||||| || ||||||| Sbjct: 203 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 262 Query: 259 cttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaaggg 318 ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 263 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 322 Query: 319 acagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcat 378 ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 323 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 382 Query: 379 gatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggca 438 |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 383 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 442 Query: 439 gaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaa 498 | ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 443 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 502 Query: 499 cgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||| |||||||| || || || || ||||| || || || |||||||||||| Sbjct: 503 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 554
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 547 bits (276), Expect = e-152 Identities = 468/532 (87%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 244 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 303 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 304 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 363 Query: 139 cctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccat 198 ||| ||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 364 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 423 Query: 199 ggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaa 258 || || | |||||||| || || ||||||||||||||| |||||||| || ||||||| Sbjct: 424 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 483 Query: 259 cttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaaggg 318 ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 484 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 543 Query: 319 acagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcat 378 ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 544 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 603 Query: 379 gatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggca 438 |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 604 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 663 Query: 439 gaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaa 498 | ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 664 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 723 Query: 499 cgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||| |||||||| || || || || ||||| || || || |||||||||||| Sbjct: 724 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 775
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 547 bits (276), Expect = e-152 Identities = 468/532 (87%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 238 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 297 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 298 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 357 Query: 139 cctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccat 198 ||| ||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 358 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 417 Query: 199 ggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaa 258 || || | |||||||| || || ||||||||||||||| |||||||| || ||||||| Sbjct: 418 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 477 Query: 259 cttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaaggg 318 ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 478 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 537 Query: 319 acagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcat 378 ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 538 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 597 Query: 379 gatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggca 438 |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 598 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 657 Query: 439 gaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaa 498 | ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 658 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 717 Query: 499 cgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||| |||||||| || || || || ||||| || || || |||||||||||| Sbjct: 718 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 769
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 539 bits (272), Expect = e-150 Identities = 467/532 (87%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 251 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 310 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 311 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 370 Query: 139 cctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccat 198 ||| ||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 371 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 430 Query: 199 ggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaa 258 || || | |||||||| || || ||||||||||||||| |||||||| || ||||||| Sbjct: 431 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 490 Query: 259 cttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaaggg 318 ||||||||| ||||||||||||||||| || |||| |||||||||||||||||||||||| Sbjct: 491 cttcatgaccctccccaacatcaaggtcccactcaccctgggtatctggggaggcaaggg 550 Query: 319 acagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcat 378 ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 551 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 610 Query: 379 gatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggca 438 |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 611 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 670 Query: 439 gaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaa 498 | ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 671 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 730 Query: 499 cgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||| |||||||| || || || || ||||| || || || |||||||||||| Sbjct: 731 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 782
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 519 bits (262), Expect = e-144 Identities = 465/532 (87%), Gaps = 3/532 (0%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 211 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 270 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 271 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 330 Query: 139 cctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccat 198 ||| ||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 331 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 390 Query: 199 ggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaa 258 || || | |||||||| || | ||||||||||||||| |||||||| || ||||||| Sbjct: 391 gggaggcttctacatcgccccttctttcatggacaagctcgtcgtccacatctccaagaa 450 Query: 259 cttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaaggg 318 ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 451 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 510 Query: 319 acagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcat 378 ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 511 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 570 Query: 379 gatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggca 438 |||||||||||| ||||||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 571 gatgagcgccggagagctggagagcggcaa---cggagagccggccaagctgatcaggca 627 Query: 439 gaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaa 498 | ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 628 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 687 Query: 499 cgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||| |||||||| || || || || ||||| || || || |||||||||||| Sbjct: 688 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 739
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 504 bits (254), Expect = e-139 Identities = 455/522 (87%) Strand = Plus / Plus Query: 25 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 84 |||||||||||| || ||| ||||| |||||||||||||||||||| | ||||| || Sbjct: 321 gtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagagggaaggg 380 Query: 85 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 144 |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| || Sbjct: 381 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 440 Query: 145 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 204 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 441 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 500 Query: 205 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 264 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 501 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 560 Query: 265 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 324 ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || || Sbjct: 561 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 620 Query: 325 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 384 || || |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 621 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 680 Query: 385 cgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggta 444 ||||| ||||||||||| || ||||| || ||||| |||||||| ||| ||||| |||| Sbjct: 681 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 740 Query: 445 ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 504 ||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| || Sbjct: 741 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 800 Query: 505 ggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 801 tgacgctggtgcgggtaggatgggcggaaccacgcagtacac 842
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 504 bits (254), Expect = e-139 Identities = 455/522 (87%) Strand = Plus / Plus Query: 25 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 84 |||||||||||| || ||| ||||| |||||||||||||||||||| | ||||| || Sbjct: 66 gtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagagggaaggg 125 Query: 85 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 144 |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| || Sbjct: 126 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 185 Query: 145 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 204 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 186 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 245 Query: 205 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 264 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 246 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 305 Query: 265 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 324 ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || || Sbjct: 306 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 365 Query: 325 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 384 || || |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 366 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 425 Query: 385 cgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggta 444 ||||| ||||||||||| || ||||| || ||||| |||||||| ||| ||||| |||| Sbjct: 426 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 485 Query: 445 ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 504 ||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| || Sbjct: 486 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 545 Query: 505 ggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 546 tgacgctggtgcgggtaggatgggcggaaccacgcagtacac 587
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 496 bits (250), Expect = e-137 Identities = 454/522 (86%) Strand = Plus / Plus Query: 25 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 84 |||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||| || Sbjct: 241 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 300 Query: 85 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 144 ||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||| || Sbjct: 301 catcgtggactccctcttccaggcgcccactggcgacggcacccacgaggccgtcctcag 360 Query: 145 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 204 ||| ||||||||| |||||||||| || |||||||||||||||||||||||||| || Sbjct: 361 ctcatacgagtacgtcagccagggactcaagaagtacgacttcgacaacaccatgggagg 420 Query: 205 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 264 | |||||||| || || |||||||||||||| | ||||| ||| ||||||||||||| Sbjct: 421 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaagaacttcat 480 Query: 265 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 324 ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || || Sbjct: 481 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 540 Query: 325 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 384 || || |||||||||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 541 aaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgatgag 600 Query: 385 cgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggta 444 ||||| ||||||||||| ||||||||||| ||||| |||||||| ||| ||||| |||| Sbjct: 601 tgccggagagctggagagtggcaacgccggagagccagccaagctcatcaggcagcggta 660 Query: 445 ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 504 ||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| || Sbjct: 661 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 720 Query: 505 ggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||||||| ||||| ||||||||||||| || |||||||| Sbjct: 721 tgacgccggtgcgggtaggatgggcgggaccacacagtacac 762
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 436 bits (220), Expect = e-119 Identities = 433/504 (85%) Strand = Plus / Plus Query: 43 cgacatctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgtt 102 ||||| |||||| ||||||||||||||||| ||||||| ||||| || ||||||||||| Sbjct: 115 cgacacctcggatgaccagcaggacatcaccagggggaagggcatggtcgactccctgtt 174 Query: 103 ccaggcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcag 162 |||||| |||||||||||||| |||||| | || |||| |||||||||||||||||||| Sbjct: 175 ccaggctcccatgggcgacggaacccacaaccccgtcctgagctcctacgagtacatcag 234 Query: 163 ccagggcctgcggaagtacgacttcgacaacaccatggacgggctgtacatcgcgccggc 222 | || || || || | |||| ||||||||| || | || | |||||||| ||||| Sbjct: 235 caccggtctccgctcgttcaacttggacaacaccgtgaatggtttatacatcgctccggc 294 Query: 223 attcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaa 282 |||||||||||||| |||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 295 cttcatggacaagcttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaa 354 Query: 283 ggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtga 342 | |||||||||| ||||||||||||||||||| || ||||| || || ||||| ||||| Sbjct: 355 gattcctctcattttgggtatctggggaggcaaaggtcaggggaaatccttccaatgtga 414 Query: 343 gctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagag 402 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 415 acttgtgttcgccaagatgggaatcaaccccatcatgatgagcgccggtgagctggagag 474 Query: 403 cggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacat 462 |||||||||||| |||||||| ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 475 cggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgaggccgccgacat 534 Query: 463 tatcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcgggccg 522 |||| ||||| |||||||||||||||||||||||||| || || ||||| || ||||| Sbjct: 535 catcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccg 594 Query: 523 gatgggcgggacgacgcagtacac 546 ||||||||| || || |||||||| Sbjct: 595 gatgggcggcaccacccagtacac 618
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 434 bits (219), Expect = e-118 Identities = 360/407 (88%) Strand = Plus / Plus Query: 144 gctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacg 203 |||||||||||||| |||||||||| || | | ||||||||||||||||||||||| | Sbjct: 327 gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgggag 386 Query: 204 ggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttca 263 | | |||||||| || || ||||||||||||||| |||||||| || |||||||||||| Sbjct: 387 gcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaacttca 446 Query: 264 tgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacagg 323 |||| ||||||||||||||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 447 tgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtcagg 506 Query: 324 gcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatga 383 | || || |||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 507 gaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgatga 566 Query: 384 gcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggt 443 ||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||| ||| Sbjct: 567 gcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggt 626 Query: 444 accgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacc 503 |||| |||||||| ||||| ||||| ||||| |||||||||||||||||||||||||| | Sbjct: 627 accgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatc 686 Query: 504 tggacgccggcgcgggccggatgggcgggacgacgcagtacacggtg 550 ||||||| || || || || ||||| || || || |||||||||||| Sbjct: 687 tggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 733 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 239 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 298 Query: 79 gaaaggcatcgtggactccctgttccaggc 108 ||| || |||| |||||||| |||||||| Sbjct: 299 gaagggtttcgtcgactcccttttccaggc 328
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 428 bits (216), Expect = e-117 Identities = 432/504 (85%) Strand = Plus / Plus Query: 43 cgacatctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgtt 102 ||||| |||||| ||||||||||||||||| ||||||| ||||| || ||||||||||| Sbjct: 222 cgacacctcggatgaccagcaggacatcaccagggggaagggcatggtcgactccctgtt 281 Query: 103 ccaggcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcag 162 |||||| |||||||||||||| |||||| | || |||| |||||||||||||||||||| Sbjct: 282 ccaggctcccatgggcgacggaacccacaaccccgtcctgagctcctacgagtacatcag 341 Query: 163 ccagggcctgcggaagtacgacttcgacaacaccatggacgggctgtacatcgcgccggc 222 | || || || || | |||| ||||||||| || | || | |||||||| ||||| Sbjct: 342 caccggtctccgctcgttcaacttggacaacaccgtgaatggtttatacatcgctccggc 401 Query: 223 attcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaa 282 |||||||||||||| |||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 402 cttcatggacaagcttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaa 461 Query: 283 ggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtga 342 | |||||||||| ||||||||||||||||||| || || || || || ||||| ||||| Sbjct: 462 gattcctctcattttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtga 521 Query: 343 gctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagag 402 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 522 acttgtgttcgccaagatgggaatcaaccccatcatgatgagcgccggtgagctggagag 581 Query: 403 cggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacat 462 |||||||||||| |||||||| ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 582 cggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgaggccgccgacat 641 Query: 463 tatcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcgggccg 522 |||| ||||| |||||||||||||||||||||||||| || || ||||| || ||||| Sbjct: 642 catcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccg 701 Query: 523 gatgggcgggacgacgcagtacac 546 ||||||||| || || |||||||| Sbjct: 702 gatgggcggcaccacccagtacac 725
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 428 bits (216), Expect = e-117 Identities = 432/504 (85%) Strand = Plus / Plus Query: 43 cgacatctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgtt 102 ||||| |||||| ||||||||||||||||| ||||||| ||||| || ||||||||||| Sbjct: 85 cgacacctcggatgaccagcaggacatcaccagggggaagggcatggtcgactccctgtt 144 Query: 103 ccaggcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcag 162 |||||| |||||||||||||| |||||| | || |||| |||||||||||||||||||| Sbjct: 145 ccaggctcccatgggcgacggaacccacaaccccgtcctgagctcctacgagtacatcag 204 Query: 163 ccagggcctgcggaagtacgacttcgacaacaccatggacgggctgtacatcgcgccggc 222 | || || || || | |||| ||||||||| || | || | |||||||| ||||| Sbjct: 205 caccggtctccgctcgttcaacttggacaacaccgtgaatggtttatacatcgctccggc 264 Query: 223 attcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaa 282 |||||||||||||| |||| ||| || ||||||||||||||| | ||||||||||| Sbjct: 265 cttcatggacaagcttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaa 324 Query: 283 ggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtga 342 | |||||||||| ||||||||||||||||||| || || || || || ||||| ||||| Sbjct: 325 gattcctctcattttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtga 384 Query: 343 gctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagag 402 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 385 acttgtgttcgccaagatgggaatcaaccccatcatgatgagcgccggtgagctggagag 444 Query: 403 cggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacat 462 |||||||||||| |||||||| ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 445 cggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgaggccgccgacat 504 Query: 463 tatcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcgggccg 522 |||| ||||| |||||||||||||||||||||||||| || || ||||| || ||||| Sbjct: 505 catcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccg 564 Query: 523 gatgggcgggacgacgcagtacac 546 ||||||||| || || |||||||| Sbjct: 565 gatgggcggcaccacccagtacac 588
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 379 bits (191), Expect = e-102 Identities = 293/327 (89%) Strand = Plus / Plus Query: 224 ttcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaag 283 ||||||||||||||| ||||||||||| |||||||||||||||| || || ||||||||| Sbjct: 22 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81 Query: 284 gttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgag 343 ||||| |||||||||||||||||||||||||| || ||||| || |||||||| || ||| Sbjct: 82 gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 141 Query: 344 ctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagagc 403 ||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 142 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 201 Query: 404 ggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacatt 463 ||||||||||| ||||| |||||||| ||| ||||| | ||||| ||||| ||||| | Sbjct: 202 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 261 Query: 464 atcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcgggccgg 523 ||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||| || Sbjct: 262 atcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgc 321 Query: 524 atgggcgggacgacgcagtacacggtg 550 |||||||| || || |||||||||||| Sbjct: 322 atgggcggcaccacccagtacacggtg 348
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 379 bits (191), Expect = e-102 Identities = 293/327 (89%) Strand = Plus / Plus Query: 224 ttcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaag 283 ||||||||||||||| ||||||||||| |||||||||||||||| || || ||||||||| Sbjct: 417 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 476 Query: 284 gttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgag 343 ||||| |||||||||||||||||||||||||| || ||||| || |||||||| || ||| Sbjct: 477 gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 536 Query: 344 ctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagagc 403 ||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 537 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 596 Query: 404 ggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacatt 463 ||||||||||| ||||| |||||||| ||| ||||| | ||||| ||||| ||||| | Sbjct: 597 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 656 Query: 464 atcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcgggccgg 523 ||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||| || Sbjct: 657 atcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgc 716 Query: 524 atgggcgggacgacgcagtacacggtg 550 |||||||| || || |||||||||||| Sbjct: 717 atgggcggcaccacccagtacacggtg 743 Score = 143 bits (72), Expect = 7e-31 Identities = 132/152 (86%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 212 ggacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccagggg 271 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 || ||| |||| ||| ||| |||||||| || ||||| ||||||||||||| ||| | Sbjct: 272 caagggcctcgtcgacaacctcttccaggcgcctatgggggacggcacccacgtcgccgt 331 Query: 139 cctaagctcctacgagtacatcagccagggcc 170 || ||||||||||| |||||||||||||||| Sbjct: 332 gctcagctcctacgactacatcagccagggcc 363
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 353 bits (178), Expect = 4e-94 Identities = 298/338 (88%) Strand = Plus / Plus Query: 209 tacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcatgaca 268 |||||||| ||||| |||||||||||||| |||| ||| || ||||||||||||||| Sbjct: 87 tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146 Query: 269 ctccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacagggcaag 328 | |||||||||||| |||||||||| ||||||||||||||||||| || ||||| || Sbjct: 147 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 206 Query: 329 tcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgcc 388 || ||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 207 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 266 Query: 389 ggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgc 448 |||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| Sbjct: 267 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 326 Query: 449 gaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacctggac 508 ||||| |||||||| |||| ||||| |||||||||||||||||||||||||| || || Sbjct: 327 gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgat 386 Query: 509 gccggcgcgggccggatgggcgggacgacgcagtacac 546 ||||| || |||||||||||||| || || |||||||| Sbjct: 387 gccggtgccggccggatgggcggcaccacccagtacac 424
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 349 bits (176), Expect = 6e-93 Identities = 288/327 (88%) Strand = Plus / Plus Query: 224 ttcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaag 283 ||||||||||||||| ||||||||||| |||||||||||||||| || || ||||||||| Sbjct: 417 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 476 Query: 284 gttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgag 343 ||||| ||||||||||||||| ||||||||| || ||||| || |||||||| || ||| Sbjct: 477 gttcccctcatcctgggtatcgtgggaggcaaaggccagggaaaatcgttccaatgcgag 536 Query: 344 ctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagagc 403 ||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 537 ctggtcttcgccaagatgggcatcannnnnatcatgatgagcgccggcgagctggagagc 596 Query: 404 ggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacatt 463 ||||||||||| ||||| |||||||| ||| ||||| | ||||| ||||| ||||| | Sbjct: 597 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 656 Query: 464 atcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcgggccgg 523 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 657 atcaagaagggcaagatgtgctgcctcttcatcaacgacttggacgccggcgcgggtcgc 716 Query: 524 atgggcgggacgacgcagtacacggtg 550 |||||||| || || |||||||||||| Sbjct: 717 atgggcggcaccacccagtacacggtg 743 Score = 121 bits (61), Expect = 3e-24 Identities = 128/152 (84%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 212 ggacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccagggg 271 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 || ||| |||| ||| ||| |||||||| || || |||||||||||| ||| | Sbjct: 272 caagggcctcgtcgacaacctcttccaggcgcctatnnnnnacggcacccacgtcgccgt 331 Query: 139 cctaagctcctacgagtacatcagccagggcc 170 || ||||||||||| |||||||||||||||| Sbjct: 332 gctcagctcctacgactacatcagccagggcc 363
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 218 bits (110), Expect = 1e-53 Identities = 278/334 (83%) Strand = Plus / Plus Query: 177 agtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagc 236 ||||| |||| ||||||| ||||||||| | ||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 237 tcatcgtccacctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcc 296 | |||||||| || ||||||||||| ||| ||||| ||||||||| ||||||| ||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 297 tgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgcca 356 ||||||||||||||||||| || || || || || ||||| ||||| || || || |||| Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610 Query: 357 agatgggcatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccggcg 416 ||||||| |||||||||||||||||||| || || |||||||| || || || || || | Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670 Query: 417 agccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggca 476 | || |||||||||||| |||| |||||||| || || || ||||||||||| ||||| | Sbjct: 671 aacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatcaagaagggta 730 Query: 477 agatgtgctgcctcttcatcaacgacctggacgc 510 | ||||||||||| ||||||||||| || ||||| Sbjct: 731 aaatgtgctgcctgttcatcaacgatctcgacgc 764
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 214 bits (108), Expect = 2e-52 Identities = 171/192 (89%) Strand = Plus / Minus Query: 178 gtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagct 237 ||||||||||||||||||||||| || | |||||||| || || |||||||||||||| Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376 Query: 238 catcgtccacctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcct 297 | |||||||| || |||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316 Query: 298 gggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgccaa 357 ||||||||||||||||||||| ||||| || || |||||||||||||| || |||||||| Sbjct: 109315 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 109256 Query: 358 gatgggcatcaa 369 |||||| ||||| Sbjct: 109255 gatggggatcaa 109244 Score = 200 bits (101), Expect = 3e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||| ||||| ||||||| |||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 109039 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 |||||||||||| |||||||| || || || || ||||| || || || ||||||||||| Sbjct: 109038 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 108979 Query: 550 g 550 | Sbjct: 108978 g 108978 Score = 155 bits (78), Expect = 2e-34 Identities = 132/150 (88%) Strand = Plus / Minus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 109707 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 109648 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 109647 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 109588 Query: 139 cctaagctcctacgagtacatcagccaggg 168 ||| ||||||||||||||| |||||||||| Sbjct: 109587 cctcagctcctacgagtacctcagccaggg 109558 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 23 cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 82 ||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 113207 cggtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaag 113148 Query: 83 ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggc 135 ||| |||| ||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 113147 ggcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 113095 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 409 cgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaa 468 |||||| ||||| || ||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 112782 cgccggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaa 112723 Query: 469 caagggcaagatgtgctgcctcttcatcaacgacctggacgc 510 |||||| ||||||||| || |||||||||||||||||||| Sbjct: 112722 caaggggaagatgtgcgtgctgttcatcaacgacctggacgc 112681 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 320 cagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaa 369 ||||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 112918 cagggcaagtcgttccagtgtgatctcgtcttcgccaagatggggatcaa 112869 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 526 gggcgggacgacgcagtacacggtg 550 |||||| |||||||||||||||||| Sbjct: 112679 gggcggcacgacgcagtacacggtg 112655
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 214 bits (108), Expect = 2e-52 Identities = 171/192 (89%) Strand = Plus / Minus Query: 178 gtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagct 237 ||||||||||||||||||||||| || | |||||||| || || |||||||||||||| Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253 Query: 238 catcgtccacctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcct 297 | |||||||| || |||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193 Query: 298 gggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgccaa 357 ||||||||||||||||||||| ||||| || || |||||||||||||| || |||||||| Sbjct: 31192 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 31133 Query: 358 gatgggcatcaa 369 |||||| ||||| Sbjct: 31132 gatggggatcaa 31121 Score = 200 bits (101), Expect = 3e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||| ||||| ||||||| |||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 30916 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 |||||||||||| |||||||| || || || || ||||| || || || ||||||||||| Sbjct: 30915 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 30856 Query: 550 g 550 | Sbjct: 30855 g 30855 Score = 155 bits (78), Expect = 2e-34 Identities = 132/150 (88%) Strand = Plus / Minus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 31584 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 31525 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 31524 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 31465 Query: 139 cctaagctcctacgagtacatcagccaggg 168 ||| ||||||||||||||| |||||||||| Sbjct: 31464 cctcagctcctacgagtacctcagccaggg 31435 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 23 cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 82 ||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 35084 cggtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaag 35025 Query: 83 ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggc 135 ||| |||| ||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 35024 ggcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 34972 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 409 cgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaa 468 |||||| ||||| || ||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 34659 cgccggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaa 34600 Query: 469 caagggcaagatgtgctgcctcttcatcaacgacctggacgc 510 |||||| ||||||||| || |||||||||||||||||||| Sbjct: 34599 caaggggaagatgtgcgtgctgttcatcaacgacctggacgc 34558 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 320 cagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaa 369 ||||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 34795 cagggcaagtcgttccagtgtgatctcgtcttcgccaagatggggatcaa 34746 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 526 gggcgggacgacgcagtacacggtg 550 |||||| |||||||||||||||||| Sbjct: 34556 gggcggcacgacgcagtacacggtg 34532
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 214 bits (108), Expect = 2e-52 Identities = 171/192 (89%) Strand = Plus / Minus Query: 178 gtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagct 237 ||||||||||||||||||||||| || | |||||||| || || |||||||||||||| Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515 Query: 238 catcgtccacctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcct 297 | |||||||| || |||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455 Query: 298 gggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgccaa 357 ||||||||||||||||||||| ||||| || || |||||||||||||| || |||||||| Sbjct: 28304454 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28304395 Query: 358 gatgggcatcaa 369 |||||| ||||| Sbjct: 28304394 gatggggatcaa 28304383 Score = 200 bits (101), Expect = 3e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||| ||||| ||||||| |||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28304178 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 |||||||||||| |||||||| || || || || ||||| || || || ||||||||||| Sbjct: 28304177 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 28304118 Query: 550 g 550 | Sbjct: 28304117 g 28304117 Score = 155 bits (78), Expect = 2e-34 Identities = 132/150 (88%) Strand = Plus / Minus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 28304846 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 28304787 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 28304786 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 28304727 Query: 139 cctaagctcctacgagtacatcagccaggg 168 ||| ||||||||||||||| |||||||||| Sbjct: 28304726 cctcagctcctacgagtacctcagccaggg 28304697 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 23 cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 82 ||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 28308346 cggtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaag 28308287 Query: 83 ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggc 135 ||| |||| ||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 28308286 ggcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28308234 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 409 cgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaa 468 |||||| ||||| || ||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 28307921 cgccggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaa 28307862 Query: 469 caagggcaagatgtgctgcctcttcatcaacgacctggacgc 510 |||||| ||||||||| || |||||||||||||||||||| Sbjct: 28307861 caaggggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 320 cagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaa 369 ||||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 28308057 cagggcaagtcgttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 526 gggcgggacgacgcagtacacggtg 550 |||||| |||||||||||||||||| Sbjct: 28307818 gggcggcacgacgcagtacacggtg 28307794
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 214 bits (108), Expect = 2e-52 Identities = 171/192 (89%) Strand = Plus / Minus Query: 178 gtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagct 237 ||||||||||||||||||||||| || | |||||||| || || |||||||||||||| Sbjct: 28287023 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28286964 Query: 238 catcgtccacctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcct 297 | |||||||| || |||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 28286963 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28286904 Query: 298 gggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgccaa 357 ||||||||||||||||||||| ||||| || || |||||||||||||| || |||||||| Sbjct: 28286903 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28286844 Query: 358 gatgggcatcaa 369 |||||| ||||| Sbjct: 28286843 gatggggatcaa 28286832 Score = 200 bits (101), Expect = 3e-48 Identities = 161/181 (88%) Strand = Plus / Minus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 28286746 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28286687 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||| ||||| ||||||| |||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 28286686 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28286627 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 |||||||||||| |||||||| || || || || ||||| || || || ||||||||||| Sbjct: 28286626 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggt 28286567 Query: 550 g 550 | Sbjct: 28286566 g 28286566 Score = 155 bits (78), Expect = 2e-34 Identities = 132/150 (88%) Strand = Plus / Minus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 28287295 ggacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagggg 28287236 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccat 138 ||| || |||| |||||||| |||||||| |||| ||| || ||||||||||||||| | Sbjct: 28287235 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 28287176 Query: 139 cctaagctcctacgagtacatcagccaggg 168 ||| ||||||||||||||| |||||||||| Sbjct: 28287175 cctcagctcctacgagtacctcagccaggg 28287146 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 23 cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 82 ||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 28290795 cggtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaag 28290736 Query: 83 ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggc 135 ||| |||| ||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 28290735 ggcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28290683 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 409 cgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaa 468 |||||| ||||| || ||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 28290370 cgccggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaa 28290311 Query: 469 caagggcaagatgtgctgcctcttcatcaacgacctggacgc 510 |||||| ||||||||| || |||||||||||||||||||| Sbjct: 28290310 caaggggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 320 cagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaa 369 ||||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 28290506 cagggcaagtcgttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 526 gggcgggacgacgcagtacacggtg 550 |||||| |||||||||||||||||| Sbjct: 28290267 gggcggcacgacgcagtacacggtg 28290243
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 210 bits (106), Expect = 4e-51 Identities = 262/314 (83%) Strand = Plus / Plus Query: 188 gacaacaccatggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccac 247 ||||||| |||||| || | ||||| || || ||||||||||||||||| | || ||| Sbjct: 256 gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315 Query: 248 ctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctgg 307 || |||||||||||||| | ||||| ||||| ||||||||||| ||| ||||||| ||| Sbjct: 316 atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375 Query: 308 ggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatc 367 |||||||| || || || || || ||||| |||||||| ||||| ||||||||||| ||| Sbjct: 376 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 435 Query: 368 aaccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaag 427 ||||||||||||||||| ||||| || ||||| || || |||||||| || || |||||| Sbjct: 436 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 495 Query: 428 ctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgc 487 ||||| |||| |||||||| || || |||||||| ||||| |||||||| |||||| | Sbjct: 496 ttgatcaggcaaaggtaccgtgaagctgccgacataatcaaaaagggcaaaatgtgcgcc 555 Query: 488 ctcttcatcaacga 501 |||||||| ||||| Sbjct: 556 ctcttcattaacga 569 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||||| ||||| || |||| ||||| || ||||||||||| |||||||| ||||| || Sbjct: 87 ggaccgatggaaagggttggcttacgatatttcggacgaccaacaggacattactcgagg 146 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatg 115 |||||| || ||||| ||| ||||||| || |||||| Sbjct: 147 gaaagggatggtggattccttgttccaagctcccatg 183
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 208 bits (105), Expect = 1e-50 Identities = 249/297 (83%) Strand = Plus / Plus Query: 188 gacaacaccatggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccac 247 ||||||| |||||| || | |||||||| || ||||||||||||||||| | || ||| Sbjct: 257 gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316 Query: 248 ctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctgg 307 || ||||||||||||| | ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 317 atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376 Query: 308 ggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatc 367 |||||||| || || || || || ||||| |||||||| ||||| ||||||||||| ||| Sbjct: 377 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 436 Query: 368 aaccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaag 427 ||||||||||||||||| ||||| || ||||| || || |||||||| || || |||||| Sbjct: 437 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 496 Query: 428 ctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgc 484 ||||| |||| |||||||| || || |||||||| ||||| |||||||| |||||| Sbjct: 497 ttgatcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggcaaaatgtgc 553 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 19 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 78 |||||| ||||| || |||| ||||| || ||||||||||| || ||||| ||||| || Sbjct: 88 ggaccgatggaaagggttggcttacgatatttcggacgaccaacaagacattactcgagg 147 Query: 79 gaaaggcatcgtggactccctgttccaggcccccatg 115 |||||| || ||||| ||| ||||||| || |||||| Sbjct: 148 gaaagggatggtggattccttgttccaagctcccatg 184
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 206 bits (104), Expect = 6e-50 Identities = 302/368 (82%) Strand = Plus / Plus Query: 143 agctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggac 202 |||||||| |||||||| ||||| ||||| || | |||||||| ||||||| |||||| Sbjct: 397 agctcctatgagtacattagccaaggccttcgcacatacgacttggacaacaacatggat 456 Query: 203 gggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttc 262 || | ||||| || || || |||||||||||||| | || ||| || ||||||||| | Sbjct: 457 ggattctacattgccccagctttcatggacaagcttgttgttcacatcaccaagaactac 516 Query: 263 atgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacag 322 ||||| || || ||||| ||||||||||| ||| ||||||| ||||||||||| || || Sbjct: 517 atgacccttcctaacattaaggttcctcttatcttgggtatttggggaggcaaaggtcaa 576 Query: 323 ggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatg 382 || || || ||||| |||||||| || || ||||||||||| ||||||||||| |||||| Sbjct: 577 ggaaaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgatg 636 Query: 383 agcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagagg 442 || ||||| || |||| || || |||||||| || || |||||| ||||| |||| ||| Sbjct: 637 agtgccggagaattggaaagtgggaacgccggagaaccagccaagttgatcaggcaaagg 696 Query: 443 taccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgac 502 ||||| ||||| |||||||||||||| || || || ||||| |||||||| |||||||| Sbjct: 697 taccgtgaggccgccgacattatcaagaaagggaaaatgtgttgcctctttatcaacgat 756 Query: 503 ctggacgc 510 || ||||| Sbjct: 757 ctcgacgc 764
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 204 bits (103), Expect = 2e-49 Identities = 220/259 (84%) Strand = Plus / Plus Query: 224 ttcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaag 283 |||||||||||||| |||| ||| || |||| ||||||||||| ||||||||||| ||| Sbjct: 494 ttcatggacaagcttgtcgttcacatcaccaaaaacttcatgactctccccaacataaag 553 Query: 284 gttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgag 343 ||||||||||| |||||||||||||||| || || || || || || |||||||||||| Sbjct: 554 gttcctctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgag 613 Query: 344 ctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagagc 403 || || || ||||||||||| |||||||||||||||||||| ||||| || |||||||| Sbjct: 614 cttgtctttgccaagatgggaatcaaccccatcatgatgagtgccggagaattggagagc 673 Query: 404 ggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacatt 463 |||||||| || ||||| || ||| ||||| |||| ||| || |||||||||||||| Sbjct: 674 ggcaacgcaggagagcccgcgaagttgatcaggcaacggtgtcgtgaggcggccgacatc 733 Query: 464 atcaacaagggcaagatgt 482 ||||| ||||| ||||||| Sbjct: 734 atcaagaagggaaagatgt 752
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 497 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 556 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 557 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 616 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 617 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 676 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 677 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 736 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 737 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 796 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 797 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 856 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 857 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 905
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 497 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 556 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 557 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 616 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 617 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 676 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 677 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 736 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 737 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 796 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 797 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 856 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 857 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 905
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 526 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 585 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 586 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 645 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 646 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 705 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 706 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 765 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 766 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 825 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 826 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 885 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 886 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 934
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 184 bits (93), Expect = 2e-43 Identities = 267/325 (82%) Strand = Plus / Plus Query: 177 agtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagc 236 ||||| |||| ||||||| ||||||||| | ||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 237 tcatcgtccacctcgccaagaacttcatgacactccccaacatcaaggttcctctcatcc 296 | |||||||| || ||||||||||| ||| ||||| ||||||||| ||||||| ||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 297 tgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgcca 356 ||||||||||||||||||| || || || || || ||||| ||||| || || || |||| Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610 Query: 357 agatgggcatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccggcg 416 ||||||| |||||||||||||||||||| || || |||||||| || || || || || | Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670 Query: 417 agccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggca 476 |||| || ||||||||| |||| ||||| || || || || || || ||||| ||||| | Sbjct: 671 agcccgcaaagctgatcaggcaaaggtatcgtgaagcagctgatatcatcaagaagggaa 730 Query: 477 agatgtgctgcctcttcatcaacga 501 | ||||||||||| || |||||||| Sbjct: 731 aaatgtgctgcctgtttatcaacga 755
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 408 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 467 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 468 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 527 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 528 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 587 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 588 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 647 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 648 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 707 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 708 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 767 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 768 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 816
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 411 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 470 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 471 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 530 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 531 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 590 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 591 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 650 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 651 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 710 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 711 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 770 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 771 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 819
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 400 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 459 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 460 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 519 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 520 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 579 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 580 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 639 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 640 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 699 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 700 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 759 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 760 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 808
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 408 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 467 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 468 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 527 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 528 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 587 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 588 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 647 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 648 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 707 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 708 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 767 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 768 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 816
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 411 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 470 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 471 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 530 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 531 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 590 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 591 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 650 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 651 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 710 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 711 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 770 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 771 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 819
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 184 bits (93), Expect = 2e-43 Identities = 330/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 526 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 585 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 586 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 645 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 646 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 705 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 706 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 765 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 766 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 825 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 826 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatca 885 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 886 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 934
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 176 bits (89), Expect = 5e-41 Identities = 329/409 (80%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 323 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 382 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 383 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 442 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagg 317 ||||| |||| || || |||||||||||||| || || ||||||| ||||||||||| | Sbjct: 443 acttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaag 502 Query: 318 gacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatca 377 | || || || || |||||||||||||| || | ||||||||||| |||||||| |||| Sbjct: 503 gtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatca 562 Query: 378 tgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggc 437 ||||||| || || ||||| ||||| || ||||| || || || || ||||| ||||| | Sbjct: 563 tgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtc 622 Query: 438 agaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatca 497 |||||||||| ||||| || ||| | ||||| ||||| |||||||| || ||| |||||| Sbjct: 623 agaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcatca 682 Query: 498 acgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 683 acgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 731
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 176 bits (89), Expect = 5e-41 Identities = 158/181 (87%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 117 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| |||||||| ||| | ||| ||||||||||||| |||||| Sbjct: 177 gatccgtcagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcct 236 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| |||||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 237 gttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacccagtacacggt 296 Query: 550 g 550 | Sbjct: 297 g 297
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 306 Query: 550 g 550 | Sbjct: 307 g 307
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302 Query: 550 g 550 | Sbjct: 303 g 303
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 550 g 550 | Sbjct: 305 g 305
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 550 g 550 | Sbjct: 305 g 305
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 308 Query: 550 g 550 | Sbjct: 309 g 309
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302 Query: 550 g 550 | Sbjct: 303 g 303
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 550 g 550 | Sbjct: 305 g 305
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 302 Query: 550 g 550 | Sbjct: 303 g 303
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 550 g 550 | Sbjct: 305 g 305
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 550 g 550 | Sbjct: 305 g 305
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 550 g 550 | Sbjct: 305 g 305
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 306 Query: 550 g 550 | Sbjct: 307 g 307
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 304 Query: 550 g 550 | Sbjct: 305 g 305
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| |||||||||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 308 Query: 550 g 550 | Sbjct: 309 g 309
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 167 bits (84), Expect = 5e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 252 ccaagaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggag 311 |||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||| Sbjct: 515 ccaagaacttcatgaccttgcccaacatcaaggttcctctcattcttggtatctggggag 574 Query: 312 gcaagggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaacc 371 |||||||||| || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 575 gcaagggacaaggaaagtctttccaatgtgagcttgtctttgccaagatgggaatcaacc 634 Query: 372 ccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctga 431 ||||||||||||| || || ||| |||| || || || ||||| ||||| || || ||| Sbjct: 635 ccatcatgatgagtgctggagagttggaaagtggaaatgccggagagccagcaaaattga 694 Query: 432 tccggcagaggtaccg 447 || ||||||| ||||| Sbjct: 695 tcaggcagagataccg 710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 tggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaa 81 |||||||||||||||||||| ||||| || ||||| || |||||||| ||||||| Sbjct: 295 tggaagggtctggcctacgatatctctgatgaccaacaagacatcacaagggggaa 350
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 167 bits (84), Expect = 5e-38 Identities = 230/276 (83%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 227 atggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaaggtt 286 ||||||||||| | || ||| || |||||||||||||||| || || ||||| |||||| Sbjct: 497 atggacaagcttgttgttcacatcaccaagaacttcatgacccttcctaacatgaaggtt 556 Query: 287 cctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctg 346 ||||||||| ||||||| ||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 557 cctctcatcttgggtatttggggaggcaaaggtcagggcaagtctttccagtgcgagctt 616 Query: 347 gtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagagcggc 406 || || ||||||||| | |||| ||| ||||||||||| ||||| || |||| || || Sbjct: 617 gtctttgccaagatgagaatcagccctatcatgatgagtgccggagaattggaaagtgga 676 Query: 407 aacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccgacattatc 466 ||||| || || || || ||||||||| |||| |||||||| || || |||||||||||| Sbjct: 677 aacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagcagccgacattatc 736 Query: 467 aacaagggcaagatgtgctgc-ctcttcatcaacga 501 | ||||| || ||||| ||| |||||||||||||| Sbjct: 737 aggaagggtaaaatgtg-tgcactcttcatcaacga 771
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 109 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcct 489 |||||| ||| | ||||| ||||| || ||| | ||| ||||||||||||| |||||| Sbjct: 169 gatccgtcagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcct 228 Query: 490 cttcatcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggt 549 ||||||||||| || ||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 229 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggt 288 Query: 550 g 550 | Sbjct: 289 g 289
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 228 tggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaaggttc 287 |||||||||| | || ||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 487 tggacaagcttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttc 546 Query: 288 ctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctgg 347 ||||||| || ||| ||||||||||||||||||| || || || ||||| |||||||| | Sbjct: 547 ctctcattcttggtgtctggggaggcaagggacaaggaaaatctttccaatgtgagcttg 606 Query: 348 tgttcgccaagatgggcatcaaccccatcatgatgag 384 | || ||||||||||| |||||||||||||||||||| Sbjct: 607 tctttgccaagatgggaatcaaccccatcatgatgag 643
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 135 bits (68), Expect = 2e-28 Identities = 284/356 (79%) Strand = Plus / Plus Query: 146 tcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacggg 205 |||||||| ||| ||||||| || || || ||||| |||| ||||||| ||||||| Sbjct: 396 tcctacgaatacgtcagccaaggtcttcgccagtacaacttggacaacaagttggacgga 455 Query: 206 ctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcatg 265 | |||||||| || || |||||||||||||| | || ||| || ||||||||||| || Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515 Query: 266 acactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacagggc 325 | | | ||||||||||||||||| || ||| ||||||||||||||||||| || || ||| Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggc 575 Query: 326 aagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagc 385 || || ||||||||||| || || ||| |||||||| ||||||||||| |||||||| Sbjct: 576 aaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagt 635 Query: 386 gccggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggtac 445 || || || |||| || || || || || ||||| |||||| |||| |||| |||||| Sbjct: 636 gctggagaattggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtac 695 Query: 446 cgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacga 501 | || || || || || |||| ||||| || ||||| ||||||||||||||||| Sbjct: 696 agagaagcagcagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacga 751
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 133 bits (67), Expect = 7e-28 Identities = 329/411 (80%), Gaps = 4/411 (0%) Strand = Plus / Plus Query: 138 tcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacca 197 |||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| ||||||| | Sbjct: 392 tccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatga 451 Query: 198 tggacgggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaaga 257 |||| ||| | ||||| || || || |||||||||||||| | || ||| || |||||| Sbjct: 452 tggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaaga 511 Query: 258 acttcatgacactccccaacatcaaggttcctctcatcctgggtatct-ggggaggcaag 316 ||||| |||| || || |||||||||||||| || || |||| ||| |||||||||| Sbjct: 512 acttcttgactctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaaa 570 Query: 317 ggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatc 376 || || || || || |||||||||||||| || | ||||||||||| |||||||| ||| Sbjct: 571 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 630 Query: 377 atgatgagcgccggtgagctggagagcggcaacgccggcga-gccggccaagctgatccg 435 |||||||| || || ||||| ||||| || ||||| || || | | || ||||| ||||| Sbjct: 631 atgatgagtgctggagagcttgagagtggaaacgcaggagaagtccgc-aagcttatccg 689 Query: 436 gcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcat 495 ||||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||||| Sbjct: 690 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 749 Query: 496 caacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 750 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 800
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 275 aacatcaaggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttc 334 |||||||||||||| || ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 584 aacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaaggtaaatccttc 643 Query: 335 cagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgag 394 || |||||||| ||||||||||||||||| |||||||||||||||||||| || || || Sbjct: 644 caatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgagtgcgggagaa 703 Query: 395 ctggagagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcg 454 |||| || || ||||| || ||||| || ||| ||||| |||| |||||||| ||||| Sbjct: 704 ttggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggtaccgtgaggca 763 Query: 455 gccgacattatcaacaagggcaagatgtg 483 || ||||| || |||||| |||||||| Sbjct: 764 gcagacataattgccaagggaaagatgtg 792
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 123 bits (62), Expect = 6e-25 Identities = 257/322 (79%) Strand = Plus / Plus Query: 209 tacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcatgaca 268 |||||| |||| || ||| |||||||| | | | ||||| | ||||||||||||||| Sbjct: 363 tacatctcgcccgctttcctggacaagatgaccatccacattgccaagaacttcatggac 422 Query: 269 ctccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacagggcaag 328 || ||||| |||||||| || ||||| |||||||||||||| |||||||| ||||||||| Sbjct: 423 ctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaagggccagggcaag 482 Query: 329 tcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgcc 388 | |||||||| | ||| | | | ||| ||||||| ||||||| | ||| ||| Sbjct: 483 accttccagtgcgcgctcgcctacaagaagctgggcattgcccccatcgtcatgtccgct 542 Query: 389 ggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgc 448 |||||||||||| |||||||||||| ||||| |||||||||||||| | ||||| Sbjct: 543 ggtgagctggagtccggcaacgccggtgagcccgccaagctgatccgcacccgctaccgg 602 Query: 449 gaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacctggac 508 ||||| ||||||| ||||| |||||| ||||||| || ||||||||||| |||||| Sbjct: 603 gaggcctccgacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggac 662 Query: 509 gccggcgcgggccggatgggcg 530 ||||| || ||||| ||||||| Sbjct: 663 gccggtgccggccgcatgggcg 684
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 109 bits (55), Expect = 1e-20 Identities = 208/259 (80%) Strand = Plus / Plus Query: 272 cccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcg 331 ||||| |||||||| || ||||| |||||||||||||| |||||||| ||||||||| | Sbjct: 1638 cccaagatcaaggtgcccctcattctgggtatctggggtggcaagggccagggcaagacc 1697 Query: 332 ttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggt 391 |||||||| | ||| | | | ||| ||||||| ||||||| | ||| ||| ||| Sbjct: 1698 ttccagtgcgcgctcgcctacaagaagctgggcattgcccccatcgtcatgtccgctggt 1757 Query: 392 gagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgag 451 ||||||||| |||||||||||| ||||| |||||||||||||| | ||||| ||| Sbjct: 1758 gagctggagtccggcaacgccggtgagcccgccaagctgatccgcacccgctaccgggag 1817 Query: 452 gcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgcc 511 || ||||||| ||||| |||||| ||||||| || ||||||||||| ||||||||| Sbjct: 1818 gcctccgacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgcc 1877 Query: 512 ggcgcgggccggatgggcg 530 || || ||||| ||||||| Sbjct: 1878 ggtgccggccgcatgggcg 1896
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 107 bits (54), Expect = 4e-20 Identities = 141/170 (82%) Strand = Plus / Plus Query: 360 tgggcatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagc 419 ||||||||| ||||||| | ||| ||||||||||||||| || |||||||| |||| Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502 Query: 420 cggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaaga 479 | |||||||| ||||| ||| | ||||||||||| |||||| | || |||||||||| Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggcttccgacagcgtgaagaagggcaaga 1562 Query: 480 tgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggc 529 |||||| ||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgctggccgcatgggc 1612 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 251 gccaagaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctgggga 310 ||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| Sbjct: 1176 gccaagaacttcatggacctgcccaagatcaaggttcccctcatcctgggtatctggggt 1235 Query: 311 ggcaagggacagggcaagtcgttccag 337 |||||||| ||||| ||| | |||||| Sbjct: 1236 ggcaagggccagggaaagaccttccag 1262
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 103 bits (52), Expect = 6e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 275 aacatcaaggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttc 334 |||||||||||||||||||| || ||||| |||||||||||||| || || ||||| ||| Sbjct: 223 aacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaagtccttc 282 Query: 335 cagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgag 394 || |||||||| || || || || |||| |||||||| || |||||||| |||||||| Sbjct: 283 caatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgccggtgaa 342 Query: 395 ctggagag 402 |||||||| Sbjct: 343 ctggagag 350
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 101 bits (51), Expect = 2e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 224 ttcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaag 283 |||||||||||||| | || ||| || ||||||||||| ||| | | |||||||||||| Sbjct: 444 ttcatggacaagcttgttgttcacatcaccaagaacttcttgaaattgcccaacatcaag 503 Query: 284 gttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgag 343 ||||| ||||| ||||| ||||||||||||| || || || || || |||||||||||| Sbjct: 504 gttccactcattttgggtgtctggggaggcaaaggtcaaggtaaatctttccagtgtgag 563 Query: 344 ctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccgg 390 || || ||| |||||||| |||||||| || |||||||| ||||| Sbjct: 564 cttgtcttcagaaagatgggaatcaaccctattatgatgagtgccgg 610
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 101 bits (51), Expect = 2e-18 Identities = 183/227 (80%) Strand = Plus / Plus Query: 227 atggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaaggtt 286 ||||||||||| | || ||| || ||||||||||| ||| | |||||||||||| | Sbjct: 650 atggacaagcttgttgttcacatcaccaagaacttcttgaacttgcccaacatcaagata 709 Query: 287 cctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctg 346 || |||||| ||||| | |||||||||||||| || || || || ||||| |||||||| Sbjct: 710 ccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtgagctt 769 Query: 347 gtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctggagagcggc 406 |||||||||||| | || || ||||||||||||||||| ||||| || |||| || || Sbjct: 770 gtgttcgccaagttaggaataaaccccatcatgatgagtgccggagaattggaaagtgga 829 Query: 407 aacgccggcgagccggccaagctgatccggcagaggtaccgcgaggc 453 || || || ||||| || ||| ||||| |||| |||||||| ||||| Sbjct: 830 aatgcaggagagccagctaagttgatcaggcaaaggtaccgtgaggc 876
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 97.6 bits (49), Expect = 4e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 224 ttcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaag 283 ||||||||||| || | || ||| || ||||||||||| ||||| | |||||||||||| Sbjct: 455 ttcatggacaaacttgttgttcacatcaccaagaacttcttgacattgcccaacatcaag 514 Query: 284 gttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgag 343 ||||| |||||| ||||| | ||||||||||| || || || || || ||||| |||||| Sbjct: 515 gttccactcatcttgggtgtatggggaggcaaaggtcaaggtaaatcattccaatgtgag 574 Query: 344 ctggtgttcgccaagatgggcatcaaccccatcatgatgag 384 || || ||| |||||||| ||||||||||| |||||||| Sbjct: 575 cttgtcttcagaaagatgggaatcaaccccattatgatgag 615
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 93.7 bits (47), Expect = 6e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 254 aagaacttcatgacactccccaacatcaaggttcctctcatcctgggtatctggggaggc 313 ||||||||| |||| ||||| ||||| |||||||||||||| |||||| | |||||||| Sbjct: 519 aagaacttcttgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggt 578 Query: 314 aagggacagggcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaacccc 373 || || || || ||||| ||||||||||| || || || || |||||||| |||||||| Sbjct: 579 aaaggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccct 638 Query: 374 atcatgatgag 384 || |||||||| Sbjct: 639 attatgatgag 649
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 89.7 bits (45), Expect = 9e-15 Identities = 141/173 (81%) Strand = Plus / Minus Query: 374 atcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatc 433 ||||||||||| || || ||||| ||||| || ||||| || || || || ||||| ||| Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496 Query: 434 cggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttc 493 || ||||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||| Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 14436 Query: 494 atcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||||||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 14435 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 14383 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Minus Query: 297 tgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgcca 356 ||||||| ||||||||||| || || || || || |||||||||||||| || | |||| Sbjct: 14723 tgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagcttgtcatggcca 14664 Query: 357 agatgggcatcaa 369 ||||||| ||||| Sbjct: 14663 agatgggtatcaa 14651 Score = 48.1 bits (24), Expect = 0.031 Identities = 87/108 (80%) Strand = Plus / Minus Query: 178 gtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagct 237 |||| |||| ||||||| ||||| ||| | ||||| || || || |||||||||||||| Sbjct: 14941 gtacaacttggacaacatgatggatgggttttacattgctcctgctttcatggacaagct 14882 Query: 238 catcgtccacctcgccaagaacttcatgacactccccaacatcaaggt 285 | || ||| || ||||||||||| |||| || || ||||||||||| Sbjct: 14881 tgttgttcacatcaccaagaacttcttgactctgcctaacatcaaggt 14834
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 89.7 bits (45), Expect = 9e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 374 atcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagctgatc 433 ||||||||||| || || ||||| ||||| || ||||| || || || || ||||| ||| Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787 Query: 434 cggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttc 493 || ||||||||||| ||||| || ||| | ||||| ||||| |||||||| || |||||| Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 2847 Query: 494 atcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacac 546 |||||||| || ||||| || ||||| || ||||| || || || |||||||| Sbjct: 2848 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 2900 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 297 tgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtgttcgcca 356 ||||||| ||||||||||| || || || || || |||||||||||||| || | |||| Sbjct: 2560 tgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagcttgtcatggcca 2619 Query: 357 agatgggcatcaa 369 ||||||| ||||| Sbjct: 2620 agatgggtatcaa 2632 Score = 48.1 bits (24), Expect = 0.031 Identities = 87/108 (80%) Strand = Plus / Plus Query: 178 gtacgacttcgacaacaccatggacgggctgtacatcgcgccggcattcatggacaagct 237 |||| |||| ||||||| ||||| ||| | ||||| || || || |||||||||||||| Sbjct: 2342 gtacaacttggacaacatgatggatgggttttacattgctcctgctttcatggacaagct 2401 Query: 238 catcgtccacctcgccaagaacttcatgacactccccaacatcaaggt 285 | || ||| || ||||||||||| |||| || || ||||||||||| Sbjct: 2402 tgttgttcacatcaccaagaacttcttgactctgcctaacatcaaggt 2449
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||||||||||| ||||| || |||||||||||||||| || ||||| || ||| | Sbjct: 467 ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526 Query: 430 gatccggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgt 482 |||| |||| ||| || |||||||||||||| ||||| ||||| ||||||| Sbjct: 527 gatcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgt 579 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 282 aggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtg 341 ||||||||||||| |||||||||||||||| || || || || || || |||||||||| Sbjct: 178 aggttcctctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtg 237 Query: 342 agctggtgttcgccaagatgggcatcaa 369 |||| || || ||||||||||| ||||| Sbjct: 238 agcttgtctttgccaagatgggaatcaa 265 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 224 ttcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaacatcaag 283 |||||||||||||| |||| ||| || |||| ||||||||||| |||||||||| ||| Sbjct: 24 ttcatggacaagcttgtcgttcacatcaccaaaaacttcatgactttccccaacataaag 83 Query: 284 gtt 286 ||| Sbjct: 84 gtt 86
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 65.9 bits (33), Expect = 1e-07 Identities = 228/293 (77%) Strand = Plus / Plus Query: 209 tacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcatgaca 268 |||||||| || || |||||||||||||| | || ||| || ||||||||||| | || Sbjct: 476 tacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttaacg 535 Query: 269 ctccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacagggcaag 328 | ||||||||||||||||| || || ||||| | |||||||| || || || || || Sbjct: 536 ttgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggtaaa 595 Query: 329 tcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgcc 388 || ||||| |||||||| || ||| |||||||| |||||||| || |||||||| || Sbjct: 596 tcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagtgct 655 Query: 389 ggtgagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgc 448 || || | || || || || || || ||||| || || ||||| |||| |||||| | Sbjct: 656 ggagaattagaaagtggaaatgcaggagagccagctaaattgatcaggcaaaggtacaga 715 Query: 449 gaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacga 501 ||||| || || || |||| ||||| || ||||| ||||||||||||||||| Sbjct: 716 gaggccgcggaaatcatcaggaagggaaacatgtgttgcctcttcatcaacga 768
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 435 ggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttca 494 |||| |||||||| |||||| |||||||||||| || || ||||||||||| ||||||| Sbjct: 7204 ggcaaaggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttca 7145 Query: 495 tcaa 498 |||| Sbjct: 7144 tcaa 7141 Score = 48.1 bits (24), Expect = 0.031 Identities = 69/84 (82%) Strand = Plus / Minus Query: 285 ttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagc 344 |||||||||| |||| || ||||||||||| || || || ||||| || || ||||||| Sbjct: 7537 ttcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgtgagc 7478 Query: 345 tggtgttcgccaagatgggcatca 368 | || || ||||||||||| |||| Sbjct: 7477 ttgtatttgccaagatgggaatca 7454
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 60.0 bits (30), Expect = 8e-06 Identities = 129/162 (79%) Strand = Plus / Plus Query: 340 tgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctgga 399 |||||| || || ||||||||||| |||||||||||||||||||| || || ||||| || Sbjct: 32 tgagcttgtctttgccaagatgggaatcaaccccatcatgatgagtgctggagagcttga 91 Query: 400 gagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggcggccga 459 || || || || || ||||| || || ||||| | ||||| ||||| || || | || Sbjct: 92 aagtggaaatgcaggagagccagcaaaattgatcagacagagataccgtgaagcctctga 151 Query: 460 cattatcaacaagggcaagatgtgctgcctcttcatcaacga 501 |||||||| || || |||||||| || || ||||||||||| Sbjct: 152 cattatcaggaaaggaaagatgtgttgtctgttcatcaacga 193
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 290 ctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtg 349 |||||| ||||| | |||||||||||||| || || || || ||||| |||||||| ||| Sbjct: 2246 ctcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtgagcttgtg 2305 Query: 350 ttcgccaag 358 ||||||||| Sbjct: 2306 ttcgccaag 2314 Score = 40.1 bits (20), Expect = 7.5 Identities = 68/84 (80%) Strand = Plus / Plus Query: 370 ccccatcatgatgagcgccggtgagctggagagcggcaacgccggcgagccggccaagct 429 ||||||||||||||| ||||| || |||| || || || || || ||||| || ||| | Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480 Query: 430 gatccggcagaggtaccgcgaggc 453 |||| |||| |||||||| ||||| Sbjct: 2481 gatcaggcaaaggtaccgtgaggc 2504
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 282 aggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtg 341 ||||||||||||| || |||||||||||||| || || || || || || ||||| || Sbjct: 104950 aggttcctctcattcttggtatctggggaggtaaaggtcaaggaaaatctttccaagctg 104891 Query: 342 agctggtgttcgccaagatgggcatcaa 369 |||| || || ||||||||||||||||| Sbjct: 104890 agcttgtctttgccaagatgggcatcaa 104863
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 282 aggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtg 341 ||||||||||||| || |||||||||||||| || || || || || || ||||| || Sbjct: 83975 aggttcctctcattcttggtatctggggaggtaaaggtcaaggaaaatctttccaagctg 83916 Query: 342 agctggtgttcgccaagatgggcatcaa 369 |||| || || ||||||||||||||||| Sbjct: 83915 agcttgtctttgccaagatgggcatcaa 83888
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 442 gtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacga 501 |||||| ||||| ||||| || ||||| ||||| || ||||||||| | ||||||||||| Sbjct: 126 gtaccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttcatcaacga 185
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 215 gcgccggcattcatggacaagct 237 ||||||||||||||||||||||| Sbjct: 637974 gcgccggcattcatggacaagct 637996
>ref|NM_001034112.1| Rattus norvegicus MAX-like protein X (Mlx), mRNA Length = 1913 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 aaggcatcgtggactccctgttccag 106 |||||||| ||||||||||||||||| Sbjct: 734 aaggcatcatggactccctgttccag 759
>ref|XM_853556.1| PREDICTED: Canis familiaris similar to Transcription factor-like protein 4 (Max-like bHLHZip protein) (BigMax protein) (Mlx), transcript variant 2 (LOC607668), mRNA Length = 1055 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 aaggcatcgtggactccctgttccag 106 |||||||| ||||||||||||||||| Sbjct: 681 aaggcatcatggactccctgttccag 706
>ref|XM_844284.1| PREDICTED: Canis familiaris similar to Transcription factor-like protein 4 (Max-like bHLHZip protein) (BigMax protein) (Mlx), transcript variant 1 (LOC607668), mRNA Length = 1120 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 aaggcatcgtggactccctgttccag 106 |||||||| ||||||||||||||||| Sbjct: 746 aaggcatcatggactccctgttccag 771
>gb|DQ350893.1| Rattus norvegicus strain COP/CrCrl max-like factor protein (Mlx) mRNA, complete cds Length = 920 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 aaggcatcgtggactccctgttccag 106 |||||||| ||||||||||||||||| Sbjct: 571 aaggcatcatggactccctgttccag 596
>gb|DQ350892.1| Rattus norvegicus strain ACI/SegHsd max-like factor protein (Mlx) mRNA, complete cds Length = 920 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 aaggcatcgtggactccctgttccag 106 |||||||| ||||||||||||||||| Sbjct: 571 aaggcatcatggactccctgttccag 596
>gb|DQ350891.1| Rattus norvegicus strain BN/SsNHsd max-like factor protein (Mlx) mRNA, complete cds Length = 920 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 aaggcatcgtggactccctgttccag 106 |||||||| ||||||||||||||||| Sbjct: 571 aaggcatcatggactccctgttccag 596
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 cctgttccaggcccccatgggcgacg 122 |||||||||||||||| ||||||||| Sbjct: 1044278 cctgttccaggcccccctgggcgacg 1044253
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tcatcaacgacctggacgccg 512 ||||||||||||||||||||| Sbjct: 813754 tcatcaacgacctggacgccg 813774
>gb|AC182435.3| Mus musculus chromosome 8, clone wi1-1119F24, complete sequence Length = 37516 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ctccctgttccaggcccccat 114 ||||||||||||||||||||| Sbjct: 35702 ctccctgttccaggcccccat 35722
>ref|NM_191433.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1215 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 acctggacgccggcgcgggc 520 |||||||||||||||||||| Sbjct: 293 acctggacgccggcgcgggc 312
>gb|DQ145546.1| Sinorhizobium meliloti plasmid pSmeSM11a, complete sequence Length = 144170 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 caagctgatccggcagaggt 443 |||||||||||||||||||| Sbjct: 64830 caagctgatccggcagaggt 64849
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 cgacggcacccacgaggccatcct 141 |||||||||| ||||||||||||| Sbjct: 961727 cgacggcacctacgaggccatcct 961704
>ref|XM_546868.2| PREDICTED: Canis familiaris similar to dipeptidase 3 (LOC489748), mRNA Length = 1368 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ggcacccacgaggccatcct 141 |||||||||||||||||||| Sbjct: 309 ggcacccacgaggccatcct 290
>gb|AY313608.1| Mastigamoeba balamuthi putative D-lactate dehydrogenase (dldh) gene, complete cds Length = 1876 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgtccacctcgccaagaact 260 |||||||||||||||||||| Sbjct: 243 cgtccacctcgccaagaact 262
>gb|AY121590.1| Uncultured bacterium clone S4 nitrite reductase (nirS) gene, partial cds Length = 502 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tcaacgacctggacgccggc 514 |||||||||||||||||||| Sbjct: 266 tcaacgacctggacgccggc 285
>gb|AY121583.1| Uncultured bacterium clone S62 nitrite reductase (nirS) gene, partial cds Length = 502 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tcaacgacctggacgccggc 514 |||||||||||||||||||| Sbjct: 266 tcaacgacctggacgccggc 285
>gb|AY121580.1| Uncultured bacterium clone S56 nitrite reductase (nirS) gene, partial cds Length = 502 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tcaacgacctggacgccggc 514 |||||||||||||||||||| Sbjct: 266 tcaacgacctggacgccggc 285
>gb|AY121579.1| Uncultured bacterium clone S32 nitrite reductase (nirS) gene, partial cds Length = 502 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tcaacgacctggacgccggc 514 |||||||||||||||||||| Sbjct: 266 tcaacgacctggacgccggc 285
>gb|AY121576.1| Uncultured bacterium clone S20 nitrite reductase (nirS) gene, partial cds Length = 502 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tcaacgacctggacgccggc 514 |||||||||||||||||||| Sbjct: 266 tcaacgacctggacgccggc 285
>gb|AY121572.1| Uncultured bacterium clone S16 nitrite reductase (nirS) gene, partial cds Length = 502 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tcaacgacctggacgccggc 514 |||||||||||||||||||| Sbjct: 266 tcaacgacctggacgccggc 285
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 acctggacgccggcgcgggc 520 |||||||||||||||||||| Sbjct: 32606063 acctggacgccggcgcgggc 32606044
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 agcggcaacgccggcgagccggcc 424 |||||||||||||||| ||||||| Sbjct: 3119262 agcggcaacgccggcgcgccggcc 3119239
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 acctggacgccggcgcgggc 520 |||||||||||||||||||| Sbjct: 68858 acctggacgccggcgcgggc 68839
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 cgggccggatgggcgggacgacgc 539 ||||||||| |||||||||||||| Sbjct: 5362353 cgggccggaagggcgggacgacgc 5362330
>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 (ENSANGG00000011813), partial mRNA Length = 1773 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgccaagatgggcatcaac 370 |||||||||||||||||||| Sbjct: 641 tcgccaagatgggcatcaac 660
>dbj|AK109736.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C09, full insert sequence Length = 1563 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 acctggacgccggcgcgggc 520 |||||||||||||||||||| Sbjct: 334 acctggacgccggcgcgggc 353
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 gacgaccagcaggacatcac 72 |||||||||||||||||||| Sbjct: 1452086 gacgaccagcaggacatcac 1452067
>emb|AJ629123.1| Streptomyces sp. DSM 40477 genomic region of the apramycin biosynthesis cluster Length = 41623 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gatgagcgccggtgagctgg 398 |||||||||||||||||||| Sbjct: 7242 gatgagcgccggtgagctgg 7223 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,401,067 Number of Sequences: 3902068 Number of extensions: 3401067 Number of successful extensions: 66095 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65394 Number of HSP's gapped (non-prelim): 669 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
