ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63k16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009295.1| Triticum aestivum clone wlm1.pk0005.d6:fis, full insert mRNA sequence Length = 1948 Score = 952 bits (480), Expect = 0.0 Identities = 549/572 (95%) Strand = Plus / Plus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 ||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 615 gaagaactaaaagcttatgcaccattgacaattgtatgtgatggctgcttttcaaactta 674 Query: 74 aggcgtgccctttgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttg 133 || |||||||||||||||||||||||||| || |||||||||||||| || || |||||| Sbjct: 675 agacgtgccctttgctctccaaaggttgaggtgccgtcttgctttgttggcctggtcttg 734 Query: 134 gagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttctccc 193 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 gagaattgtgaacttcctcatgcgaaccatggccatgttatcttggccaatccttctccc 794 Query: 194 atcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggccag 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 795 atcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggtcag 854 Query: 254 aaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgcacct 313 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 855 aaggtgccttccatagcaagtggtgaaatgacaaattatctcaagaccgtggttgcacct 914 Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 |||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 915 cagattcctccacaaatctgtgattcttttatagcagcaattgataagggaagcataaga 974 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 1034 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 1094 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 |||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 1095 gatatagtcgtcctgcgtaatcttatcaagcttcttcgcaatctgcatgatgcctctgcc 1154 Query: 554 ctctgcaaatacctagagtcattctacactct 585 |||||||||||||| ||||||||||| ||||| Sbjct: 1155 ctctgcaaatacctcgagtcattctatactct 1186
>ref|XM_470614.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1815 Score = 615 bits (310), Expect = e-173 Identities = 502/566 (88%) Strand = Plus / Plus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| ||||||| |||||||| |||||||||| ||||||||||| || || ||| | Sbjct: 628 gaagaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaacctt 687 Query: 74 aggcgtgccctttgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttg 133 | || ||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||| || Sbjct: 688 cgccgcgccctttgctctccaaaggttgatgtaccatcttgttttgttgggctggtcctg 747 Query: 134 gagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttctccc 193 ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| || Sbjct: 748 gagaattgtcaacttcctcatgcaaaccatggccatgttgtcctggccaatccttcacct 807 Query: 194 atcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggccag 253 |||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 808 atcctattttacccaataagcagcactgaagttcgctgtttggttgatgtccctggtcag 867 Query: 254 aaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgcacct 313 |||||||| |||||||||| |||||||||||||| |||||||| || |||||||||||| Sbjct: 868 aaggtgccttccatagcaaacggtgaaatggcaaaatatctcaaaacagtggttgcacct 927 Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 928 cagattcctccagaaatctatgattcattcatagcagccattgataagggaagcataaga 987 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 988 acaatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatg 1047 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 1048 ggtgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatct 1107 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || || | |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 1108 gacattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgct 1167 Query: 554 ctctgcaaatacctagagtcattcta 579 || ||||||||||| || |||||||| Sbjct: 1168 ctttgcaaataccttgaatcattcta 1193
>dbj|AK061945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E03, full insert sequence Length = 1273 Score = 615 bits (310), Expect = e-173 Identities = 502/566 (88%) Strand = Plus / Plus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| ||||||| |||||||| |||||||||| ||||||||||| || || ||| | Sbjct: 38 gaagaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaacctt 97 Query: 74 aggcgtgccctttgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttg 133 | || ||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||| || Sbjct: 98 cgccgcgccctttgctctccaaaggttgatgtaccatcttgttttgttgggctggtcctg 157 Query: 134 gagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttctccc 193 ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| || Sbjct: 158 gagaattgtcaacttcctcatgcaaaccatggccatgttgtcctggccaatccttcacct 217 Query: 194 atcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggccag 253 |||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 218 atcctattttacccaataagcagcactgaagttcgctgtttggttgatgtccctggtcag 277 Query: 254 aaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgcacct 313 |||||||| |||||||||| |||||||||||||| |||||||| || |||||||||||| Sbjct: 278 aaggtgccttccatagcaaacggtgaaatggcaaaatatctcaaaacagtggttgcacct 337 Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 338 cagattcctccagaaatctatgattcattcatagcagccattgataagggaagcataaga 397 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 398 acaatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatg 457 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 458 ggtgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatct 517 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || || | |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 518 gacattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgct 577 Query: 554 ctctgcaaatacctagagtcattcta 579 || ||||||||||| || |||||||| Sbjct: 578 ctttgcaaataccttgaatcattcta 603
>dbj|AK098895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P20, full insert sequence Length = 2011 Score = 615 bits (310), Expect = e-173 Identities = 502/566 (88%) Strand = Plus / Plus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| ||||||| |||||||| |||||||||| ||||||||||| || || ||| | Sbjct: 792 gaagaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaacctt 851 Query: 74 aggcgtgccctttgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttg 133 | || ||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||| || Sbjct: 852 cgccgcgccctttgctctccaaaggttgatgtaccatcttgttttgttgggctggtcctg 911 Query: 134 gagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttctccc 193 ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| || Sbjct: 912 gagaattgtcaacttcctcatgcaaaccatggccatgttgtcctggccaatccttcacct 971 Query: 194 atcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggccag 253 |||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 972 atcctattttacccaataagcagcactgaagttcgctgtttggttgatgtccctggtcag 1031 Query: 254 aaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgcacct 313 |||||||| |||||||||| |||||||||||||| |||||||| || |||||||||||| Sbjct: 1032 aaggtgccttccatagcaaacggtgaaatggcaaaatatctcaaaacagtggttgcacct 1091 Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 1092 cagattcctccagaaatctatgattcattcatagcagccattgataagggaagcataaga 1151 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 1152 acaatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatg 1211 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 1212 ggtgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatct 1271 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || || | |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 1272 gacattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgct 1331 Query: 554 ctctgcaaatacctagagtcattcta 579 || ||||||||||| || |||||||| Sbjct: 1332 ctttgcaaataccttgaatcattcta 1357
>dbj|AK065032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H02, full insert sequence Length = 2034 Score = 611 bits (308), Expect = e-171 Identities = 500/564 (88%) Strand = Plus / Plus Query: 16 agaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaacttaag 75 |||| ||||||| |||||||| |||||||||| ||||||||||| || || ||| | | Sbjct: 795 agaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaaccttcg 854 Query: 76 gcgtgccctttgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttgga 135 || ||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||| |||| Sbjct: 855 ccgcgccctttgctctccaaaggttgatgtaccatcttgttttgttgggctggtcctgga 914 Query: 136 gaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttctcccat 195 ||||||||||||||||||||| ||||||||||||||| || ||||||||||||| || || Sbjct: 915 gaattgtcaacttcctcatgcaaaccatggccatgttgtcctggccaatccttcacctat 974 Query: 196 cctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggccagaa 255 |||||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 975 cctattttacccaataagcagcactgaagttcgctgtttggttgatgtccctggtcagaa 1034 Query: 256 ggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgcacctca 315 |||||| |||||||||| |||||||||||||| |||||||| || |||||||||||||| Sbjct: 1035 ggtgccttccatagcaaacggtgaaatggcaaaatatctcaaaacagtggttgcacctca 1094 Query: 316 gattcctccagaaatctacgattcttttatagcagccattgataagggaagcataaggac 375 |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| || Sbjct: 1095 gattcctccagaaatctatgattcattcatagcagccattgataagggaagcataagaac 1154 Query: 376 aatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatggg 435 ||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 1155 aatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatggg 1214 Query: 436 agatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatcaga 495 ||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||| || Sbjct: 1215 tgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatctga 1274 Query: 496 tatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgccct 555 || || || | |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 1275 cattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgctct 1334 Query: 556 ctgcaaatacctagagtcattcta 579 ||||||||||| || |||||||| Sbjct: 1335 ttgcaaataccttgaatcattcta 1358
>gb|AY104774.1| Zea mays PCO148653 mRNA sequence Length = 1228 Score = 500 bits (252), Expect = e-138 Identities = 447/512 (87%) Strand = Plus / Plus Query: 56 ggctgcttttcgaacttaaggcgtgccctttgctctccaaaggttgaagtaccgtcttgc 115 ||||||||||| || || |||||||||||||||||||||| ||||| || || || || Sbjct: 7 ggctgcttttcaaatctacggcgtgccctttgctctccaaaagttgatgttccatcatgt 66 Query: 116 tttgtagggcttgtcttggagaattgtcaacttcctcatgcgaaccatggccatgttatc 175 ||| | ||||| || ||||||||||| |||||||| ||| | |||||||||||||||||| Sbjct: 67 tttattgggctggtattggagaattgccaacttccacatccaaaccatggccatgttatc 126 Query: 176 ttggccaatccttctcccatcctattttacccgataagcagcaccgaggttcgctgtttg 235 |||||||||||||| || || ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 127 ttggccaatccttcgccaatactattttacccaattagcagcacagaggtgcgctgtttg 186 Query: 236 gtagatgtccctggccagaaggtgccctccatagcaagtggtgaaatggcaaattatctc 295 || |||||||| || ||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 187 gttgatgtcccaggtcagaaggtgccttccatagctagcggtgaaatggcaaattatctc 246 Query: 296 aagaccgtggttgcacctcagattcctccagaaatctacgattcttttatagcagccatt 355 || ||||| |||||||| |||||||||||||||||||| || ||||| ||||| |||||| Sbjct: 247 aaaaccgtcgttgcaccccagattcctccagaaatctatgactctttcatagcggccatt 306 Query: 356 gataagggaagcataaggacaatgccaaataggagcatgccagctgcaccacatccaaca 415 ||||||||||||||||| ||||||||||| |||||||||||||| || |||| ||| || Sbjct: 307 gataagggaagcataagaacaatgccaaacaggagcatgccagcggctccacttcctacc 366 Query: 416 cctggtgcacttttgatgggagatgctttcaatatgcgacaccctttaacaggtggagga 475 ||||| |||||| ||||||| ||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 367 cctggcgcacttctgatgggggatgccttcaatatgagacaccctttaactggtggagga 426 Query: 476 atgactgttgcattatcagatatagtcgtcttgcgtaatcttctcaagcctcttcgcaat 535 ||||||||||||||||| || || || ||| | |||||||||||||||||||| |||||| Sbjct: 427 atgactgttgcattatccgacatcgttgtcctacgtaatcttctcaagcctctccgcaat 486 Query: 536 ctgcatgatgcctctgccctctgcaaatacct 567 || || || || ||| |||| ||||| ||||| Sbjct: 487 ctccacgacgcatcttccctgtgcaagtacct 518
>ref|XM_470613.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1569 Score = 472 bits (238), Expect = e-130 Identities = 475/554 (85%) Strand = Plus / Plus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| |||| || |||||||||||||||||||| ||||||||||| || || ||| || Sbjct: 604 gaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaaccta 663 Query: 74 aggcgtgccctttgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttg 133 |||||| ||| ||||||||||||||||| || || || || ||||| ||| | || ||| Sbjct: 664 cggcgtgtcctgtgctctccaaaggttgatgtgccatcctgttttgttgggttggttttg 723 Query: 134 gagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttctccc 193 |||||||||||||||||||| | |||||||||||||||||| |||| |||||||| || Sbjct: 724 gagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttcacct 783 Query: 194 atcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggccag 253 ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| ||| Sbjct: 784 atcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctgggcag 843 Query: 254 aaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgcacct 313 |||||||| ||||| |||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 844 aaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgcacct 903 Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 ||||||||||||||| || | |||||||| || ||||| |||||||| |||||||||||| Sbjct: 904 cagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataagg 963 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||||||||| ||||||||||| |||| |||||| ||||| || || |||||| Sbjct: 964 acaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgatg 1023 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 1024 ggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttct 1083 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || ||| | || ||||||||||||||||| |||| ||||| ||||| || || Sbjct: 1084 gacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttcc 1143 Query: 554 ctctgcaaatacct 567 || ||||| ||||| Sbjct: 1144 ctgtgcaagtacct 1157
>dbj|AK073426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045D18, full insert sequence Length = 2164 Score = 472 bits (238), Expect = e-130 Identities = 475/554 (85%) Strand = Plus / Plus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| |||| || |||||||||||||||||||| ||||||||||| || || ||| || Sbjct: 680 gaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaaccta 739 Query: 74 aggcgtgccctttgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttg 133 |||||| ||| ||||||||||||||||| || || || || ||||| ||| | || ||| Sbjct: 740 cggcgtgtcctgtgctctccaaaggttgatgtgccatcctgttttgttgggttggttttg 799 Query: 134 gagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttctccc 193 |||||||||||||||||||| | |||||||||||||||||| |||| |||||||| || Sbjct: 800 gagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttcacct 859 Query: 194 atcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggccag 253 ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| ||| Sbjct: 860 atcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctgggcag 919 Query: 254 aaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgcacct 313 |||||||| ||||| |||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 920 aaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgcacct 979 Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 ||||||||||||||| || | |||||||| || ||||| |||||||| |||||||||||| Sbjct: 980 cagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataagg 1039 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||||||||| ||||||||||| |||| |||||| ||||| || || |||||| Sbjct: 1040 acaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgatg 1099 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 1100 ggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttct 1159 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || ||| | || ||||||||||||||||| |||| ||||| ||||| || || Sbjct: 1160 gacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttcc 1219 Query: 554 ctctgcaaatacct 567 || ||||| ||||| Sbjct: 1220 ctgtgcaagtacct 1233
>dbj|AK068401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149F23, full insert sequence Length = 3149 Score = 472 bits (238), Expect = e-130 Identities = 475/554 (85%) Strand = Plus / Plus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| |||| || |||||||||||||||||||| ||||||||||| || || ||| || Sbjct: 1914 gaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaaccta 1973 Query: 74 aggcgtgccctttgctctccaaaggttgaagtaccgtcttgctttgtagggcttgtcttg 133 |||||| ||| ||||||||||||||||| || || || || ||||| ||| | || ||| Sbjct: 1974 cggcgtgtcctgtgctctccaaaggttgatgtgccatcctgttttgttgggttggttttg 2033 Query: 134 gagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttctccc 193 |||||||||||||||||||| | |||||||||||||||||| |||| |||||||| || Sbjct: 2034 gagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttcacct 2093 Query: 194 atcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggccag 253 ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| ||| Sbjct: 2094 atcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctgggcag 2153 Query: 254 aaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgcacct 313 |||||||| ||||| |||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 2154 aaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgcacct 2213 Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 ||||||||||||||| || | |||||||| || ||||| |||||||| |||||||||||| Sbjct: 2214 cagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataagg 2273 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||||||||| ||||||||||| |||| |||||| ||||| || || |||||| Sbjct: 2274 acaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgatg 2333 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 2334 ggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttct 2393 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || ||| | || ||||||||||||||||| |||| ||||| ||||| || || Sbjct: 2394 gacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttcc 2453 Query: 554 ctctgcaaatacct 567 || ||||| ||||| Sbjct: 2454 ctgtgcaagtacct 2467
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 297 bits (150), Expect = 2e-77 Identities = 237/266 (89%) Strand = Plus / Minus Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 6928476 cagattcctccagaaatctatgattcattcatagcagccattgataagggaagcataaga 6928417 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 6928416 acaatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatg 6928357 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 6928356 ggtgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatct 6928297 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || || | |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 6928296 gacattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgct 6928237 Query: 554 ctctgcaaatacctagagtcattcta 579 || ||||||||||| || |||||||| Sbjct: 6928236 ctttgcaaataccttgaatcattcta 6928211 Score = 264 bits (133), Expect = 3e-67 Identities = 199/221 (90%) Strand = Plus / Minus Query: 96 aggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcctcatg 155 ||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||| Sbjct: 6928785 aggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatg 6928726 Query: 156 cgaaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagca 215 | ||||||||||||||| || ||||||||||||| || |||||||||||||| ||||||| Sbjct: 6928725 caaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagca 6928666 Query: 216 gcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtg 275 |||| || |||||||||||||| ||||||||||| ||||||||||| |||||||||| | Sbjct: 6928665 gcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacg 6928606 Query: 276 gtgaaatggcaaattatctcaagaccgtggttgcacctcag 316 ||||||||||||| |||||||| || ||||||||||||||| Sbjct: 6928605 gtgaaatggcaaaatatctcaaaacagtggttgcacctcag 6928565 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Minus Query: 131 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 190 ||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 6923763 ttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttca 6923704 Query: 191 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggc 250 || ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct: 6923703 cctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctggg 6923644 Query: 251 cagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgca 310 ||||||||||| ||||| |||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 6923643 cagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgca 6923584 Query: 311 cctcag 316 |||||| Sbjct: 6923583 cctcag 6923578 Score = 196 bits (99), Expect = 6e-47 Identities = 216/255 (84%) Strand = Plus / Minus Query: 313 tcagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataag 372 |||||||||||||||| || | |||||||| || ||||| |||||||| ||||||||||| Sbjct: 6923499 tcagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataag 6923440 Query: 373 gacaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgat 432 |||||||||||||||||| ||||||||||| |||| |||||| ||||| || || ||||| Sbjct: 6923439 gacaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgat 6923380 Query: 433 gggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatc 492 ||| ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 6923379 gggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttc 6923320 Query: 493 agatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgc 552 || || || ||| | || ||||||||||||||||| |||| ||||| ||||| || | Sbjct: 6923319 tgacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttc 6923260 Query: 553 cctctgcaaatacct 567 ||| ||||| ||||| Sbjct: 6923259 cctgtgcaagtacct 6923245 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| |||| || |||||||||||||||||||| ||||||||||| || || ||| || Sbjct: 6923983 gaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaaccta 6923924 Query: 74 aggcgtgccctttgctctccaaaggt 99 |||||| ||| |||||||||||||| Sbjct: 6923923 cggcgtgtcctgtgctctccaaaggt 6923898 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| ||||||| |||||||| |||||||||| ||||||||||| || || ||| | Sbjct: 6928946 gaagaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaacctt 6928887 Query: 74 aggcgtgccctttgctctccaaaggt 99 | || |||||||||||||||||||| Sbjct: 6928886 cgccgcgccctttgctctccaaaggt 6928861
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 297 bits (150), Expect = 2e-77 Identities = 237/266 (89%) Strand = Plus / Minus Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 6926371 cagattcctccagaaatctatgattcattcatagcagccattgataagggaagcataaga 6926312 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 6926311 acaatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatg 6926252 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 6926251 ggtgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatct 6926192 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || || | |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 6926191 gacattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgct 6926132 Query: 554 ctctgcaaatacctagagtcattcta 579 || ||||||||||| || |||||||| Sbjct: 6926131 ctttgcaaataccttgaatcattcta 6926106 Score = 264 bits (133), Expect = 3e-67 Identities = 199/221 (90%) Strand = Plus / Minus Query: 96 aggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcctcatg 155 ||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||| Sbjct: 6926680 aggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatg 6926621 Query: 156 cgaaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagca 215 | ||||||||||||||| || ||||||||||||| || |||||||||||||| ||||||| Sbjct: 6926620 caaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagca 6926561 Query: 216 gcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtg 275 |||| || |||||||||||||| ||||||||||| ||||||||||| |||||||||| | Sbjct: 6926560 gcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacg 6926501 Query: 276 gtgaaatggcaaattatctcaagaccgtggttgcacctcag 316 ||||||||||||| |||||||| || ||||||||||||||| Sbjct: 6926500 gtgaaatggcaaaatatctcaaaacagtggttgcacctcag 6926460 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Minus Query: 131 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 190 ||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 6921658 ttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttca 6921599 Query: 191 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggc 250 || ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct: 6921598 cctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctggg 6921539 Query: 251 cagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgca 310 ||||||||||| ||||| |||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 6921538 cagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgca 6921479 Query: 311 cctcag 316 |||||| Sbjct: 6921478 cctcag 6921473 Score = 196 bits (99), Expect = 6e-47 Identities = 216/255 (84%) Strand = Plus / Minus Query: 313 tcagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataag 372 |||||||||||||||| || | |||||||| || ||||| |||||||| ||||||||||| Sbjct: 6921394 tcagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataag 6921335 Query: 373 gacaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgat 432 |||||||||||||||||| ||||||||||| |||| |||||| ||||| || || ||||| Sbjct: 6921334 gacaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgat 6921275 Query: 433 gggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatc 492 ||| ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 6921274 gggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttc 6921215 Query: 493 agatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgc 552 || || || ||| | || ||||||||||||||||| |||| ||||| ||||| || | Sbjct: 6921214 tgacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttc 6921155 Query: 553 cctctgcaaatacct 567 ||| ||||| ||||| Sbjct: 6921154 cctgtgcaagtacct 6921140 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| |||| || |||||||||||||||||||| ||||||||||| || || ||| || Sbjct: 6921878 gaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaaccta 6921819 Query: 74 aggcgtgccctttgctctccaaaggt 99 |||||| ||| |||||||||||||| Sbjct: 6921818 cggcgtgtcctgtgctctccaaaggt 6921793 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| ||||||| |||||||| |||||||||| ||||||||||| || || ||| | Sbjct: 6926841 gaagaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaacctt 6926782 Query: 74 aggcgtgccctttgctctccaaaggt 99 | || |||||||||||||||||||| Sbjct: 6926781 cgccgcgccctttgctctccaaaggt 6926756
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 297 bits (150), Expect = 2e-77 Identities = 237/266 (89%) Strand = Plus / Minus Query: 314 cagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataagg 373 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 95073 cagattcctccagaaatctatgattcattcatagcagccattgataagggaagcataaga 95014 Query: 374 acaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatg 433 ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 95013 acaatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatg 94954 Query: 434 ggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatca 493 || ||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 94953 ggtgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatct 94894 Query: 494 gatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgcc 553 || || || || | |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 94893 gacattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgct 94834 Query: 554 ctctgcaaatacctagagtcattcta 579 || ||||||||||| || |||||||| Sbjct: 94833 ctttgcaaataccttgaatcattcta 94808 Score = 264 bits (133), Expect = 3e-67 Identities = 199/221 (90%) Strand = Plus / Minus Query: 96 aggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcctcatg 155 ||||||| ||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||| Sbjct: 95382 aggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatg 95323 Query: 156 cgaaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagca 215 | ||||||||||||||| || ||||||||||||| || |||||||||||||| ||||||| Sbjct: 95322 caaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagca 95263 Query: 216 gcaccgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtg 275 |||| || |||||||||||||| ||||||||||| ||||||||||| |||||||||| | Sbjct: 95262 gcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacg 95203 Query: 276 gtgaaatggcaaattatctcaagaccgtggttgcacctcag 316 ||||||||||||| |||||||| || ||||||||||||||| Sbjct: 95202 gtgaaatggcaaaatatctcaaaacagtggttgcacctcag 95162 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Minus Query: 131 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 190 ||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 90360 ttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttca 90301 Query: 191 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggc 250 || ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct: 90300 cctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctggg 90241 Query: 251 cagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgca 310 ||||||||||| ||||| |||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 90240 cagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgca 90181 Query: 311 cctcag 316 |||||| Sbjct: 90180 cctcag 90175 Score = 196 bits (99), Expect = 6e-47 Identities = 216/255 (84%) Strand = Plus / Minus Query: 313 tcagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataag 372 |||||||||||||||| || | |||||||| || ||||| |||||||| ||||||||||| Sbjct: 90096 tcagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataag 90037 Query: 373 gacaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgat 432 |||||||||||||||||| ||||||||||| |||| |||||| ||||| || || ||||| Sbjct: 90036 gacaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgat 89977 Query: 433 gggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatc 492 ||| ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 89976 gggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttc 89917 Query: 493 agatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgc 552 || || || ||| | || ||||||||||||||||| |||| ||||| ||||| || | Sbjct: 89916 tgacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttc 89857 Query: 553 cctctgcaaatacct 567 ||| ||||| ||||| Sbjct: 89856 cctgtgcaagtacct 89842 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| |||| || |||||||||||||||||||| ||||||||||| || || ||| || Sbjct: 90580 gaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaaccta 90521 Query: 74 aggcgtgccctttgctctccaaaggt 99 |||||| ||| |||||||||||||| Sbjct: 90520 cggcgtgtcctgtgctctccaaaggt 90495 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| ||||||| |||||||| |||||||||| ||||||||||| || || ||| | Sbjct: 95543 gaagaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaacctt 95484 Query: 74 aggcgtgccctttgctctccaaaggt 99 | || |||||||||||||||||||| Sbjct: 95483 cgccgcgccctttgctctccaaaggt 95458
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12, complete sequence Length = 120392 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Minus Query: 131 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 190 ||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 119696 ttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttca 119637 Query: 191 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgtccctggc 250 || ||||||| |||||||||||||||||| ||| |||| |||||||| ||| ||||||| Sbjct: 119636 cctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctggg 119577 Query: 251 cagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaagaccgtggttgca 310 ||||||||||| ||||| |||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 119576 cagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgca 119517 Query: 311 cctcag 316 |||||| Sbjct: 119516 cctcag 119511 Score = 196 bits (99), Expect = 6e-47 Identities = 216/255 (84%) Strand = Plus / Minus Query: 313 tcagattcctccagaaatctacgattcttttatagcagccattgataagggaagcataag 372 |||||||||||||||| || | |||||||| || ||||| |||||||| ||||||||||| Sbjct: 119432 tcagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataag 119373 Query: 373 gacaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgat 432 |||||||||||||||||| ||||||||||| |||| |||||| ||||| || || ||||| Sbjct: 119372 gacaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgat 119313 Query: 433 gggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatc 492 ||| ||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| || || Sbjct: 119312 gggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttc 119253 Query: 493 agatatagtcgtcttgcgtaatcttctcaagcctcttcgcaatctgcatgatgcctctgc 552 || || || ||| | || ||||||||||||||||| |||| ||||| ||||| || | Sbjct: 119252 tgacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttc 119193 Query: 553 cctctgcaaatacct 567 ||| ||||| ||||| Sbjct: 119192 cctgtgcaagtacct 119178 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 14 gaagaactaaaagcttatgcaccattgacaattgtgtgcgatggctgcttttcgaactta 73 |||||| |||| || |||||||||||||||||||| ||||||||||| || || ||| || Sbjct: 119916 gaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaaccta 119857 Query: 74 aggcgtgccctttgctctccaaaggt 99 |||||| ||| |||||||||||||| Sbjct: 119856 cggcgtgtcctgtgctctccaaaggt 119831
>gb|BT013842.1| Lycopersicon esculentum clone 132799F, mRNA sequence Length = 1978 Score = 147 bits (74), Expect = 5e-32 Identities = 191/230 (83%) Strand = Plus / Plus Query: 353 attgataagggaagcataaggacaatgccaaataggagcatgccagctgcaccacatcca 412 |||||||| |||| ||| ||||||||||| || | |||||||||||||| || ||||| Sbjct: 1148 attgataaaggaaacatcaggacaatgcccaaccgaagcatgccagctgctcctcatcct 1207 Query: 413 acacctggtgcacttttgatgggagatgctttcaatatgcgacaccctttaacaggtgga 472 || |||||||| ||| | ||||| ||||| ||||| ||||| ||||| || || |||||| Sbjct: 1208 actcctggtgctcttctcatgggtgatgcattcaacatgcgccaccccttgactggtgga 1267 Query: 473 ggaatgactgttgcattatcagatatagtcgtcttgcgtaatcttctcaagcctcttcgc 532 ||||||||||| |||||||| ||||| || || |||||| |||||||||| |||||||| Sbjct: 1268 ggaatgactgtagcattatctgatatcgttgtattgcgtgatcttctcaaacctcttcgt 1327 Query: 533 aatctgcatgatgcctctgccctctgcaaatacctagagtcattctacac 582 ||| || ||||||| ||| | || |||| ||| || |||||||| ||||| Sbjct: 1328 aatttgaatgatgcatctactctttgcagatatctggagtcattttacac 1377
>gb|AY995182.1| Datura innoxia squalene monooxygenase mRNA, complete cds Length = 1990 Score = 143 bits (72), Expect = 7e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 371 aggacaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttg 430 |||||||||||||| | |||||||||||||| || |||||||| |||||||| ||| | Sbjct: 1050 aggacaatgccaaaccgaagcatgccagctgctcctcatccaactcctggtgctcttctc 1109 Query: 431 atgggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcatta 490 |||||||||||||| |||||||| ||||| || || ||||||||||||||||| ||||| Sbjct: 1110 atgggagatgcttttaatatgcgccaccccttgactggtggaggaatgactgtagcattg 1169 Query: 491 tcagatatagtcgtcttgcgtaatcttctcaagcctcttc 530 || ||||| || || |||||| |||||||||| ||||||| Sbjct: 1170 tctgatattgttgtattgcgtgatcttctcaaacctcttc 1209 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 92 ccaaaggttgaagtaccgtcttgctttgtagggcttgtcttggagaattgtcaacttcct 151 |||||||| ||||| || ||||| ||||| || |||||| ||||||| || || ||||| Sbjct: 771 ccaaaggtagaagtgccttcttgttttgttggtcttgtcctggagaactgccagcttcca 830 Query: 152 catgcgaaccatggccatgttatcttggccaatccttctcccatcctattttacccgata 211 |||| || ||||| ||||| || ||||| |||| || || ||| | || || || ||| Sbjct: 831 catgaaaatcatggacatgtcattttggcagatccatcacctatcttgttctatcccata 890 Query: 212 agcagcaccgaggttcgctgtttggtagatgtccctgg 249 ||||| || |||||||||||| |||| ||||| ||||| Sbjct: 891 agcagtactgaggttcgctgtctggttgatgtacctgg 928
>gb|AC124214.8| Medicago truncatula clone mth2-36a23, complete sequence Length = 118803 Score = 119 bits (60), Expect = 1e-23 Identities = 204/252 (80%) Strand = Plus / Plus Query: 337 ttcttttatagcagccattgataagggaagcataaggacaatgccaaataggagcatgcc 396 ||||||||| ||||| ||||||| |||| |||||| | ||||||||||| |||||||| Sbjct: 95005 ttcttttattgcagcagttgataaaggaaacataagaagcatgccaaatagaagcatgcc 95064 Query: 397 agctgcaccacatccaacacctggtgcacttttgatgggagatgctttcaatatgcgaca 456 || |||| |||| || ||||| || ||| ||||||||||||| ||||||||||| || Sbjct: 95065 tgcatcaccttatcccacccctggggctcttctgatgggagatgccttcaatatgcgtca 95124 Query: 457 ccctttaacaggtggaggaatgactgttgcattatcagatatagtcgtcttgcgtaatct 516 ||||||||||| |||||||||||||| || || || || || || | | | ||||| Sbjct: 95125 tcctttaacaggaggaggaatgactgtggctttgtctgacattgttttgctaaggaatct 95184 Query: 517 tctcaagcctcttcgcaatctgcatgatgcctctgccctctgcaaatacctagagtcatt 576 || || ||||| || |||||||||||||| ||||| || |||| ||||| |||||||| Sbjct: 95185 acttaaacctctgcgtaatctgcatgatgcttctgctctttgcatttacctcgagtcatt 95244 Query: 577 ctacactctacg 588 |||||| ||||| Sbjct: 95245 ctacaccctacg 95256 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 131 ttggagaattgtcaacttcctcatgcgaaccatggccatgttatcttggccaatccttct 190 |||||||||||| | ||||| ||||| || ||||| ||||||||||||| ||||||| Sbjct: 94682 ttggagaattgtaatcttccacatgcaaatcatggacatgttatcttgggtgatccttca 94741 Query: 191 cccatcctattttacccgataagcagcaccgaggttcgctgtttggtagatgt 243 || || | |||||||| ||||| || |||||| |||| |||||||| ||||| Sbjct: 94742 ccaattttgttttaccctataagtagtaccgagattcgttgtttggttgatgt 94794
>dbj|AB003516.1| Panax ginseng mRNA for squalene epoxidase, complete cds Length = 1845 Score = 81.8 bits (41), Expect = 2e-12 Identities = 212/269 (78%) Strand = Plus / Plus Query: 218 accgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtggt 277 |||||| ||||||||||||| ||||| ||||| || |||||||| | || | | ||| Sbjct: 904 accgagattcgctgtttggttgatgtgcctggacaaaaggtgccttgtatttctaatggg 963 Query: 278 gaaatggcaaattatctcaagaccgtggttgcacctcagattcctccagaaatctacgat 337 ||| |||| |||||||||||||| || || || |||||| |||| | | | || | Sbjct: 964 gaattggctaattatctcaagacagtagtagctcctcaggttccaaaacagctatataac 1023 Query: 338 tcttttatagcagccattgataagggaagcataaggacaatgccaaataggagcatgcca 397 ||||| |||||||| |||| || |||| ||| || || |||||||| || ||||||||| Sbjct: 1024 tctttcatagcagcagttgacaaaggaaacattagaaccatgccaaacagaagcatgcca 1083 Query: 398 gctgcaccacatccaacacctggtgcacttttgatgggagatgctttcaatatgcgacac 457 || | || |||||||| || ||||||||||| | || ||||||||||||||||| || Sbjct: 1084 gccgatcctcatccaactccgggtgcacttttattaggggatgctttcaatatgcgccat 1143 Query: 458 cctttaacaggtggaggaatgactgttgc 486 |||||||| || || |||||||| ||||| Sbjct: 1144 cctttaaccggcgggggaatgacagttgc 1172
>emb|AJ430609.1|MTR430609 Medicago truncatula mRNA for squalene monooxygenase 1 (sqp1 gene) Length = 1848 Score = 79.8 bits (40), Expect = 9e-12 Identities = 130/160 (81%) Strand = Plus / Plus Query: 367 cataaggacaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcact 426 |||||||||||||||||| || ||||||||||| | || |||| || || || || || Sbjct: 1067 cataaggacaatgccaaacagaagcatgccagccgatccttatcccaccccgggagccct 1126 Query: 427 tttgatgggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgc 486 | ||||||||||||| ||||| ||||| || || |||| || || || |||||||| || Sbjct: 1127 tctgatgggagatgcattcaacatgcgccatcccctaaccgggggtgggatgactgtggc 1186 Query: 487 attatcagatatagtcgtcttgcgtaatcttctcaagcct 526 |||||| |||||||| || |||| |||||||| |||||| Sbjct: 1187 attatctgatatagtagtgctgcgaaatcttctgaagcct 1226 Score = 44.1 bits (22), Expect = 0.51 Identities = 67/82 (81%) Strand = Plus / Plus Query: 225 ttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtggtgaaatgg 284 |||||||| |||| ||||| ||||| |||||||| || || || | | ||||||||||| Sbjct: 925 ttcgctgtctggttgatgttcctggtcagaaggttccatctatttccaatggtgaaatgg 984 Query: 285 caaattatctcaagaccgtggt 306 |||| ||| | ||||| ||||| Sbjct: 985 caaagtatttgaagacagtggt 1006
>gb|BT013525.1| Lycopersicon esculentum clone 132243F, mRNA sequence Length = 1986 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 377 atgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatggga 436 |||||||| ||||||||||||||||| || |||| |||||||| || || ||| | || Sbjct: 1034 atgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggc 1093 Query: 437 gatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgc 486 ||| ||||||| ||||| || || ||||| ||||| |||||||||||||| Sbjct: 1094 gattctttcaacatgcgccatccattaactggtgggggaatgactgttgc 1143 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 158 aaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagcagc 217 |||||||| |||||||| |||| |||||||||||||| ||||||| || || || ||| Sbjct: 815 aaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagc 874 Query: 218 accgaggttcgctgtttggtagatgtccctgg 249 || || ||||||| ||||| ||||| ||||| Sbjct: 875 acggaaattcgctgcttggtcgatgtacctgg 906
>gb|DQ457054.1| Panax notoginseng squalene epoxidase mRNA, complete cds Length = 1648 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 377 atgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatggga 436 |||||||| || ||||||||||||| || |||||||| || ||||||||| | | || Sbjct: 1028 atgccaaacagaagcatgccagctgatcctcatccaactccgggtgcacttctattaggg 1087 Query: 437 gatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgc 486 ||||||||||||||||| || |||||||| || || |||||||| ||||| Sbjct: 1088 gatgctttcaatatgcgccatcctttaaccggcgggggaatgacagttgc 1137 Score = 48.1 bits (24), Expect = 0.033 Identities = 84/104 (80%) Strand = Plus / Plus Query: 218 accgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtggt 277 |||||| ||||||||||||| ||| | ||||| || |||||||| || || | | ||| Sbjct: 869 accgagattcgctgtttggttgatttgcctggacaaaaggtgccttctatttctaatggg 928 Query: 278 gaaatggcaaattatctcaagaccgtggttgcacctcagattcc 321 ||| |||| |||||||||||||| || || || |||||| |||| Sbjct: 929 gaattggctaattatctcaagacagtagtagctcctcaggttcc 972
>gb|AF167426.1| Lycopersicon esculentum 1-aminocyclopropane-1-carboxylate synthase (ACS7B) and putative squalene epoxidase (ERG) genes, complete cds Length = 13830 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 377 atgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatggga 436 |||||||| ||||||||||||||||| || |||| |||||||| || || ||| | || Sbjct: 10573 atgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggc 10514 Query: 437 gatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgc 486 ||| ||||||| ||||| || || ||||| ||||| |||||||||||||| Sbjct: 10513 gattctttcaacatgcgccatccattaactggtgggggaatgactgttgc 10464 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 158 aaccatggccatgttatcttggccaatccttctcccatcctattttacccgataagcagc 217 |||||||| |||||||| |||| |||||||||||||| ||||||| || || || ||| Sbjct: 10978 aaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagc 10919 Query: 218 accgaggttcgctgtttggtagatgtccctgg 249 || || ||||||| ||||| ||||| ||||| Sbjct: 10918 acggaaattcgctgcttggtcgatgtacctgg 10887
>dbj|AB122078.1| Panax ginseng mRNA for squalene epoxidase, complete cds Length = 2005 Score = 69.9 bits (35), Expect = 9e-09 Identities = 206/263 (78%) Strand = Plus / Plus Query: 218 accgaggttcgctgtttggtagatgtccctggccagaaggtgccctccatagcaagtggt 277 |||||| ||||||||||||| ||||| ||||| || |||||||| | || | | ||| Sbjct: 965 accgagattcgctgtttggttgatgtgcctggacaaaaggtgccttgtatttctaatggg 1024 Query: 278 gaaatggcaaattatctcaagaccgtggttgcacctcagattcctccagaaatctacgat 337 ||| |||| |||||||||||||| || || || |||||| |||| | | | || | Sbjct: 1025 gaattggctaattatctcaagacagtagtagctcctcaggttccaaaacagctatataac 1084 Query: 338 tcttttatagcagccattgataagggaagcataaggacaatgccaaataggagcatgcca 397 ||||| |||||||| |||| || |||| ||| || || |||||||| || ||||||||| Sbjct: 1085 tctttcatagcagcagttgacaaaggaaacattagaaccatgccaaacagaagcatgcca 1144 Query: 398 gctgcaccacatccaacacctggtgcacttttgatgggagatgctttcaatatgcgacac 457 || | || |||||||| || ||||||||| | | || ||||||||||||||||| || Sbjct: 1145 gccgatcctcatccaactccgggtgcacttctattaggggatgctttcaatatgcgccat 1204 Query: 458 cctttaacaggtggaggaatgac 480 |||||||| || || |||||||| Sbjct: 1205 cctttaaccggcgggggaatgac 1227
>ref|NM_104624.3| Arabidopsis thaliana XF1; oxidoreductase AT1G58440 (XF1) mRNA, complete cds Length = 1892 Score = 67.9 bits (34), Expect = 4e-08 Identities = 217/278 (78%) Strand = Plus / Plus Query: 239 gatgtccctggccagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaag 298 ||||| || |||||||| ||||| ||||| |||| |||||||||| ||| ||| | ||| Sbjct: 885 gatgttcccggccagaaagtgccgtccattgcaaatggtgaaatgaaaaactatttgaag 944 Query: 299 accgtggttgcacctcagattcctccagaaatctacgattcttttatagcagccattgat 358 || || || || |||||||| |||| || |||| || ||||| || || || ||||| Sbjct: 945 actgttgtggctcctcagatgcctcatgaggtctatgactctttcattgctgcggttgat 1004 Query: 359 aagggaagcataaggacaatgccaaataggagcatgccagctgcaccacatccaacacct 418 || |||| || | | | |||||||| || |||||||||||| | || |||| || || Sbjct: 1005 aaaggaaatattaagtccatgccaaacagaagcatgccagcttctccttatcctactcca 1064 Query: 419 ggtgcacttttgatgggagatgctttcaatatgcgacaccctttaacaggtggaggaatg 478 || || || || ||||||||||| || || ||||| || ||||| || |||||||||||| Sbjct: 1065 ggggctctgttaatgggagatgcatttaacatgcgtcatcctttgacgggtggaggaatg 1124 Query: 479 actgttgcattatcagatatagtcgtcttgcgtaatct 516 || ||||||||| | || || || ||| |||||||||| Sbjct: 1125 acggttgcattagctgacattgttgtcctgcgtaatct 1162
>gb|DQ386734.1| Panax notoginseng squalene epoxidase mRNA, complete cds Length = 1623 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 377 atgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatggga 436 |||||||| || ||||||||||||| || |||||||| || ||||||||| | | || Sbjct: 1023 atgccaaacagaagcatgccagctgatcctcatccaactccgggtgcacttctattaggg 1082 Query: 437 gatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgc 486 |||||||||||| |||| || |||||||| || || |||||||| ||||| Sbjct: 1083 gatgctttcaatgtgcgccatcctttaaccggcgggggaatgacagttgc 1132
>gb|BT000239.1| Arabidopsis thaliana squalene monooxygenase, putative (At1g58440) mRNA, complete cds Length = 1672 Score = 67.9 bits (34), Expect = 4e-08 Identities = 217/278 (78%) Strand = Plus / Plus Query: 239 gatgtccctggccagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaag 298 ||||| || |||||||| ||||| ||||| |||| |||||||||| ||| ||| | ||| Sbjct: 841 gatgttcccggccagaaagtgccgtccattgcaaatggtgaaatgaaaaactatttgaag 900 Query: 299 accgtggttgcacctcagattcctccagaaatctacgattcttttatagcagccattgat 358 || || || || |||||||| |||| || |||| || ||||| || || || ||||| Sbjct: 901 actgttgtggctcctcagatgcctcatgaggtctatgactctttcattgctgcggttgat 960 Query: 359 aagggaagcataaggacaatgccaaataggagcatgccagctgcaccacatccaacacct 418 || |||| || | | | |||||||| || |||||||||||| | || |||| || || Sbjct: 961 aaaggaaatattaagtccatgccaaacagaagcatgccagcttctccttatcctactcca 1020 Query: 419 ggtgcacttttgatgggagatgctttcaatatgcgacaccctttaacaggtggaggaatg 478 || || || || ||||||||||| || || ||||| || ||||| || |||||||||||| Sbjct: 1021 ggggctctgttaatgggagatgcatttaacatgcgtcatcctttgacgggtggaggaatg 1080 Query: 479 actgttgcattatcagatatagtcgtcttgcgtaatct 516 || ||||||||| | || || || ||| |||||||||| Sbjct: 1081 acggttgcattagctgacattgttgtcctgcgtaatct 1118
>gb|AY099643.1| Arabidopsis thaliana squalene monooxygenase, putative (At1g58440) mRNA, complete cds Length = 1799 Score = 67.9 bits (34), Expect = 4e-08 Identities = 217/278 (78%) Strand = Plus / Plus Query: 239 gatgtccctggccagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaag 298 ||||| || |||||||| ||||| ||||| |||| |||||||||| ||| ||| | ||| Sbjct: 885 gatgttcccggccagaaagtgccgtccattgcaaatggtgaaatgaaaaactatttgaag 944 Query: 299 accgtggttgcacctcagattcctccagaaatctacgattcttttatagcagccattgat 358 || || || || |||||||| |||| || |||| || ||||| || || || ||||| Sbjct: 945 actgttgtggctcctcagatgcctcatgaggtctatgactctttcattgctgcggttgat 1004 Query: 359 aagggaagcataaggacaatgccaaataggagcatgccagctgcaccacatccaacacct 418 || |||| || | | | |||||||| || |||||||||||| | || |||| || || Sbjct: 1005 aaaggaaatattaagtccatgccaaacagaagcatgccagcttctccttatcctactcca 1064 Query: 419 ggtgcacttttgatgggagatgctttcaatatgcgacaccctttaacaggtggaggaatg 478 || || || || ||||||||||| || || ||||| || ||||| || |||||||||||| Sbjct: 1065 ggggctctgttaatgggagatgcatttaacatgcgtcatcctttgacgggtggaggaatg 1124 Query: 479 actgttgcattatcagatatagtcgtcttgcgtaatct 516 || ||||||||| | || || || ||| |||||||||| Sbjct: 1125 acggttgcattagctgacattgttgtcctgcgtaatct 1162
>dbj|AB008021.1| Arabidopsis thaliana XF1 mRNA, complete cds Length = 1800 Score = 67.9 bits (34), Expect = 4e-08 Identities = 217/278 (78%) Strand = Plus / Plus Query: 239 gatgtccctggccagaaggtgccctccatagcaagtggtgaaatggcaaattatctcaag 298 ||||| || |||||||| ||||| ||||| |||| |||||||||| ||| ||| | ||| Sbjct: 869 gatgttcccggccagaaagtgccgtccattgcaaatggtgaaatgaaaaactatttgaag 928 Query: 299 accgtggttgcacctcagattcctccagaaatctacgattcttttatagcagccattgat 358 || || || || |||||||| |||| || |||| || ||||| || || || ||||| Sbjct: 929 actgttgtggctcctcagatgcctcatgaggtctatgactctttcattgctgcggttgat 988 Query: 359 aagggaagcataaggacaatgccaaataggagcatgccagctgcaccacatccaacacct 418 || |||| || | | | |||||||| || |||||||||||| | || |||| || || Sbjct: 989 aaaggaaatattaagtccatgccaaacagaagcatgccagcttctccttatcctactcca 1048 Query: 419 ggtgcacttttgatgggagatgctttcaatatgcgacaccctttaacaggtggaggaatg 478 || || || || ||||||||||| || || ||||| || ||||| || |||||||||||| Sbjct: 1049 ggggctctgttaatgggagatgcatttaacatgcgtcatcctttgacgggtggaggaatg 1108 Query: 479 actgttgcattatcagatatagtcgtcttgcgtaatct 516 || ||||||||| | || || || ||| |||||||||| Sbjct: 1109 acggttgcattagctgacattgttgtcctgcgtaatct 1146
>emb|BX814705.1|CNS0AELG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZH03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1834 Score = 63.9 bits (32), Expect = 6e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 377 atgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatggga 436 |||||||| || |||||||||||| | || |||| || || || || || || |||||| Sbjct: 1003 atgccaaacagaagcatgccagcttctccttatcctactccaggggctctgttaatggga 1062 Query: 437 gatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatcagat 496 ||||| || || ||||| || ||||| || |||||||||||||| ||||||||| | || Sbjct: 1063 gatgcatttaacatgcgtcatcctttgacgggtggaggaatgacggttgcattagctgac 1122 Query: 497 atagtcgtcttgcgtaatct 516 || || ||| |||||||||| Sbjct: 1123 attgttgtcctgcgtaatct 1142
>gb|AC082643.6|AC082643 Arabidopsis thaliana chromosome 1 BAC F9K23 genomic sequence, complete sequence Length = 48891 Score = 63.9 bits (32), Expect = 6e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 377 atgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatggga 436 |||||||| || |||||||||||| | || |||| || || || || || || |||||| Sbjct: 17899 atgccaaacagaagcatgccagcttctccttatcctactccaggggctctgttaatggga 17958 Query: 437 gatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatcagat 496 ||||| || || ||||| || ||||| || |||||||||||||| ||||||||| | || Sbjct: 17959 gatgcatttaacatgcgtcatcctttgacgggtggaggaatgacggttgcattagctgac 18018 Query: 497 atagtcgtcttgcgtaatct 516 || || ||| |||||||||| Sbjct: 18019 attgttgtcctgcgtaatct 18038
>dbj|AB077822.1| Arabidopsis thaliana genomic DNA, chromosome 1, P1 clone:X7J, complete sequence Length = 77636 Score = 63.9 bits (32), Expect = 6e-07 Identities = 113/140 (80%) Strand = Plus / Minus Query: 377 atgccaaataggagcatgccagctgcaccacatccaacacctggtgcacttttgatggga 436 |||||||| || |||||||||||| | || |||| || || || || || || |||||| Sbjct: 43425 atgccaaacagaagcatgccagcttctccttatcctactccaggggctctgttaatggga 43366 Query: 437 gatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcattatcagat 496 ||||| || || ||||| || ||||| || |||||||||||||| ||||||||| | || Sbjct: 43365 gatgcatttaacatgcgtcatcctttgacgggtggaggaatgacggttgcattagctgac 43306 Query: 497 atagtcgtcttgcgtaatct 516 || || ||| |||||||||| Sbjct: 43305 attgttgtcctgcgtaatct 43286
>emb|AJ430608.1|MTR430608 Medicago truncatula mRNA for squalene monooxygenase 2 (sqp2 gene) Length = 1912 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Plus Query: 367 cataaggacaatgccaaataggagcatgccagctgcaccacatccaacacctggtgcact 426 |||||||||||||||||| || || |||||||| | || | ||| || ||||| || | Sbjct: 1091 cataaggacaatgccaaacagaagtatgccagcagatcctcgtcctactcctggagccgt 1150 Query: 427 tttgatgggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgc 486 ||||||||||||| ||||| ||||| || || ||||||| || |||||||| || || Sbjct: 1151 actgatgggagatgcattcaacatgcgtcatccactaacagggggcggaatgaccgtagc 1210 Query: 487 attatcagatatagtcgtcttgcgtaatcttctcaagcct 526 ||| || || || || || ||| | ||||||||||||||| Sbjct: 1211 attgtctgacattgtggtgttgagaaatcttctcaagcct 1250
>gb|DQ366569.1| Medicago sativa squalene epoxidase (SE1) gene, complete cds Length = 5812 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 429 tgatgggagatgctttcaatatgcgacaccctttaacaggtggaggaatgactgttgcat 488 ||||||||||||| ||||| ||||| || || ||||||| || |||||||| || |||| Sbjct: 4296 tgatgggagatgcattcaacatgcgtcatccactaacagggggcggaatgaccgtagcat 4355 Query: 489 tatcagatatagtcgtcttgcgtaatcttctcaagcct 526 | || || || || || ||| | ||||||||||||||| Sbjct: 4356 tgtctgacattgtggtgttgagaaatcttctcaagcct 4393
>gb|AC092586.2| Homo sapiens BAC clone RP11-30H15 from 2, complete sequence Length = 130636 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 caatccttctcccatcctattt 202 |||||||||||||||||||||| Sbjct: 83159 caatccttctcccatcctattt 83138
>ref|XM_417070.1| PREDICTED: Gallus gallus similar to Glia derived nexin precursor (GDN) (Protease nexin I) (PN-1) (LOC418875), mRNA Length = 2639 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 ggagcatgccagctgcaccac 407 ||||||||||||||||||||| Sbjct: 1661 ggagcatgccagctgcaccac 1641
>emb|CR936360.14| Human DNA sequence from clone RP13-440N7 on chromosome X, complete sequence Length = 154563 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cctttgctctccaaaggttga 102 ||||||||||||||||||||| Sbjct: 43030 cctttgctctccaaaggttga 43010
>emb|BX908402.3| Human DNA sequence from clone WI2-87136C11 on chromosome X, complete sequence Length = 36556 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cctttgctctccaaaggttga 102 ||||||||||||||||||||| Sbjct: 15997 cctttgctctccaaaggttga 15977
>emb|BX649635.3| Human DNA sequence from clone WI2-82904A1 on chromosome X, complete sequence Length = 43709 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cctttgctctccaaaggttga 102 ||||||||||||||||||||| Sbjct: 5369 cctttgctctccaaaggttga 5349
>gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207999 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ctgtttggtagatgtccctg 248 |||||||||||||||||||| Sbjct: 103221 ctgtttggtagatgtccctg 103202
>ref|XM_519950.1| PREDICTED: Pan troglodytes similar to squalene epoxidase (LOC464383), mRNA Length = 1671 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 1198 ggtggaggaatgactgttgc 1217
>ref|NM_003129.3| Homo sapiens squalene epoxidase (SQLE), mRNA Length = 2989 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 2178 ggtggaggaatgactgttgc 2197
>gb|AY299121.1| Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome Length = 44373 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 aataggagcatgccagctgcacca 406 |||||||||||||| ||||||||| Sbjct: 4644 aataggagcatgcctgctgcacca 4667
>gb|BC017033.1| Homo sapiens squalene epoxidase, mRNA (cDNA clone MGC:9087 IMAGE:3846346), complete cds Length = 2236 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 1410 ggtggaggaatgactgttgc 1429
>gb|AY815500.1| Schistosoma japonicum SJCHGC01887 protein mRNA, complete cds Length = 740 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 attcggcacgagggaagaac 20 |||||||||||||||||||| Sbjct: 216 attcggcacgagggaagaac 197
>gb|AF216671.7| Homo sapiens chromosome 8 clone RP11-300I14 map q24.13, complete sequence Length = 183027 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 126804 ggtggaggaatgactgttgc 126823
>gb|AC133331.3| Homo sapiens chromosome 8 clone RP11-156O22 map q24.13, complete sequence Length = 174972 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 110928 ggtggaggaatgactgttgc 110947
>gb|AC131026.11| Medicago truncatula clone mth2-6e18, complete sequence Length = 114815 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 atgatgcctctgccctctgc 559 |||||||||||||||||||| Sbjct: 47413 atgatgcctctgccctctgc 47432
>emb|AL590667.7| Human DNA sequence from clone RP11-441L11 on chromosome 1 Contains a novel transcript and the 5' end of the BCL9 gene for B-cell CLL/lymphoma 9 protein, complete sequence Length = 175494 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acttttgatgggagatgctt 443 |||||||||||||||||||| Sbjct: 88169 acttttgatgggagatgctt 88188
>ref|XM_501576.1| Yarrowia lipolytica CLIB122, YALI0C07909g predicted mRNA Length = 2730 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cttggccaatccttctccca 194 |||||||||||||||||||| Sbjct: 2334 cttggccaatccttctccca 2315
>ref|XM_786188.1| PREDICTED: Strongylocentrotus purpuratus similar to Neuropilin-1a precursor (znrp1) (LOC586404), partial mRNA Length = 1143 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 tgatgggagatgctttcaat 448 |||||||||||||||||||| Sbjct: 963 tgatgggagatgctttcaat 982
>emb|X86790.1|SCS288C14 S.cerevisiae N3810, N3815, N3820 and N3825 genes Length = 9172 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 cacctggtgcacttttgatg 433 |||||||||||||||||||| Sbjct: 5265 cacctggtgcacttttgatg 5246
>emb|BX647605.1|HSM807751 Homo sapiens mRNA; cDNA DKFZp686B0215 (from clone DKFZp686B0215) Length = 2978 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 2150 ggtggaggaatgactgttgc 2169
>gb|AC090311.12| Homo sapiens chromosome 18, clone RP11-742D12, complete sequence Length = 97882 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cacatccaacacctggtgca 424 |||||||||||||||||||| Sbjct: 20113 cacatccaacacctggtgca 20094
>emb|AL606488.15| Mouse DNA sequence from clone RP23-90E8 on chromosome 13 Contains part of a novel gene, complete sequence Length = 188423 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tggccaatccttctcccatc 196 |||||||||||||||||||| Sbjct: 101997 tggccaatccttctcccatc 101978
>gb|AC009908.13| Homo sapiens chromosome 8, clone RP11-6D1, complete sequence Length = 174981 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 110935 ggtggaggaatgactgttgc 110954
>gb|AC148482.10| Medicago truncatula clone mth2-36j11, complete sequence Length = 115873 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 caaattatctcaagaccgtg 304 |||||||||||||||||||| Sbjct: 9536 caaattatctcaagaccgtg 9517
>emb|CR599266.1| full-length cDNA clone CS0CAP005YM11 of Thymus of Homo sapiens (human) Length = 1423 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 625 ggtggaggaatgactgttgc 644
>dbj|AB220561.1| Macaca fascicularis mRNA, clone QtrA-14235: similar to Homo sapiens squalene epoxidase (SQLE), mRNA, NM_003129.3 Length = 2260 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 1421 ggtggaggaatgactgttgc 1440
>dbj|AP008979.1| Xanthomonas oryzae phage OP1 DNA, complete genome Length = 43785 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 aataggagcatgccagctgcacca 406 |||||||||||||| ||||||||| Sbjct: 3913 aataggagcatgcctgctgcacca 3936
>dbj|AB168433.1| Macaca fascicularis testis cDNA clone: QtsA-12125, similar to human RIKEN cDNA 4930578I06 (LOC203076), mRNA, RefSeq: XM_114621.4 Length = 2367 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctggccagaaggtgccctcc 265 |||||||||||||||||||| Sbjct: 889 ctggccagaaggtgccctcc 870
>emb|BX647400.1|HSM807545 Homo sapiens mRNA; cDNA DKFZp686N03144 (from clone DKFZp686N03144) Length = 2956 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 2112 ggtggaggaatgactgttgc 2131
>gb|AF098865.1|AF098865 Homo sapiens squalene epoxidase (ERG1) mRNA, complete cds Length = 2199 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 1407 ggtggaggaatgactgttgc 1426
>gb|AC007074.2|AC007074 Homo sapiens PAC clone RP3-368G6 from X, complete sequence Length = 57876 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 ttatgcaccattgacaattgtgtg 51 ||||||||||||||| |||||||| Sbjct: 27310 ttatgcaccattgactattgtgtg 27287
>emb|Z71690.1|SCYNR075W S.cerevisiae chromosome XIV reading frame ORF YNR075w Length = 3179 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 cacctggtgcacttttgatg 433 |||||||||||||||||||| Sbjct: 1505 cacctggtgcacttttgatg 1486
>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete sequence Length = 239958 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 agggcttgtcttggagaatt 140 |||||||||||||||||||| Sbjct: 103336 agggcttgtcttggagaatt 103355
>gb|AC147558.3| Mus musculus BAC clone RP23-470N2 from 8, complete sequence Length = 212626 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 ttttatagcagccattgataaggg 363 ||||| |||||||||||||||||| Sbjct: 1080 ttttaaagcagccattgataaggg 1103
>gb|AC140919.2| Mus musculus BAC clone RP24-510L10 from 1, complete sequence Length = 159472 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 agggcttgtcttggagaatt 140 |||||||||||||||||||| Sbjct: 78051 agggcttgtcttggagaatt 78070
>gb|AC151732.2| Mus musculus BAC clone RP23-240L23 from 8, complete sequence Length = 204634 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 ttttatagcagccattgataaggg 363 ||||| |||||||||||||||||| Sbjct: 56841 ttttaaagcagccattgataaggg 56818
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cttggccaatccttctccca 194 |||||||||||||||||||| Sbjct: 1047838 cttggccaatccttctccca 1047819
>dbj|D78129.1|HUMHL1115B Homo sapiens mRNA for squalene epoxidase, partial cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 696 ggtggaggaatgactgttgc 715
>dbj|D78130.1| Homo sapiens mRNA for squalene epoxidase, complete cds Length = 2326 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ggtggaggaatgactgttgc 486 |||||||||||||||||||| Sbjct: 1515 ggtggaggaatgactgttgc 1534 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,575,661 Number of Sequences: 3902068 Number of extensions: 4575661 Number of successful extensions: 78789 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78576 Number of HSP's gapped (non-prelim): 189 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
