Clone Name	bah63m22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge...	811	0.0
2	emb|Y14433.1|MTTANAD2 Triticum aestivum mitochondrial nad2 gene,...	803	0.0
3	emb|Y14435.1|MTTANADH2 Triticum aestivum mitochondrial NADH dehy...	662	0.0
4	gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-1...	454	e-124
5	gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA...	454	e-124
6	gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar N...	454	e-124
7	dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochond...	454	e-124
8	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	438	e-120
9	dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic D...	438	e-120
10	gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome	412	e-112
11	gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit...	412	e-112
12	gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion...	412	e-112
13	gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion...	412	e-112
14	dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge...	357	2e-95
15	dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial geno...	349	6e-93
16	dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial geno...	343	4e-91
17	gb|AY672909.1| Dimocarpus longan NADH dehydrogenase subunit 2-li...	327	2e-86
18	gb|AF034120.1|PGNAD2S01 Panax ginseng NADH-dehydrogenase subunit...	325	9e-86
19	gb|M81725.1|OBENAD201 Oenothera berteriana NADH dehydrogenase su...	323	3e-85
20	dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome	315	8e-83
21	gb|BT011704.1| Arabidopsis thaliana At2g07733 gene, complete cds	307	2e-80
22	gb|AC006225.3| Arabidopsis thaliana chromosome 2 BAC T5E7 genomi...	307	2e-80
23	emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome	307	2e-80
24	emb|X96535.1|ATRPSNAD A.thaliana mitochondrial rps4 gene & nad2 ...	307	2e-80
25	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	246	6e-62
26	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	246	6e-62
27	emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa...	246	6e-62
28	emb|X99020.1|MYSCATP Secale cereale mitochondrial atpA & atp9 genes	188	1e-44
29	emb|X80469.1|MTTDATPA9 T.durum mitochondria genes atpA and atp9	180	3e-42
30	gb|M68929.1|MPOMTCG Marchantia polymorpha mitochondrion, complet...	174	2e-40
31	dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complet...	174	2e-40
32	emb|X80470.1|MTDATPA9 T.durum mitochondria atpA and atp9 mRNA	172	8e-40
33	emb|X16049.1|MITATPAA Wheat mitochondrial atpA gene for F-1-ATPa...	159	1e-35
34	gb|AC149197.13| Medicago truncatula clone mth2-33p18, complete s...	107	4e-20
35	gb|AC148395.12| Medicago truncatula clone mth2-28d22, complete s...	107	4e-20
36	gb|M57903.1|RICMTCOXI Oryza sativa (japonica cultivar-group) tRN...	103	6e-19
37	emb|X15990.1|MIOSCOXI Rice mitochondrial coxI gene for cytochrom...	103	6e-19
38	dbj|AK064537.1| Oryza sativa (japonica cultivar-group) cDNA clon...	103	6e-19
39	emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa...	103	6e-19
40	emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa...	103	6e-19
41	emb|AJ409125.1|GGN409125 Gnetum gnemon mitochondrial partial nad...	103	6e-19
42	emb|AJ409120.1|LAN409120 Lycopodium annotinum mitochondrial part...	96	1e-16
43	emb|AJ299545.1|CRI299545 Cinclidotus riparius mitochondrial part...	90	9e-15
44	emb|AJ299544.1|TLA299544 Tortula latifolia mitochondrial partial...	90	9e-15
45	emb|AJ299543.1|PTR299543 Pottia truncata mitochondrial partial n...	90	9e-15
46	emb|AJ299536.1|DPE299536 Dichodontium pellucidum mitochondrial p...	90	9e-15
47	emb|AJ299531.1|BAP299531 Buxbaumia aphylla mitochondrial partial...	90	9e-15
48	emb|AJ299529.1|TPE299529 Tetraphis pellucida mitochondrial parti...	90	9e-15
49	emb|AJ299524.1|SFA299524 Sphagnum fallax mitochondrial partial n...	90	9e-15
50	emb|AJ299528.1|PUR299528 Pogonatum urnigerum mitochondrial parti...	88	4e-14
51	emb|AJ299527.1|AUN299527 Atrichum undulatum mitochondrial partia...	88	4e-14
52	emb|AJ299561.1|SSE299561 Herzogiella seligeri mitochondrial part...	82	2e-12
53	emb|AJ299565.1|IAL299565 Isothecium alopecurum mitochondrial par...	82	2e-12
54	emb|AJ299564.1|LPO299564 Leskea polycarpa mitochondrial partial ...	82	2e-12
55	emb|AJ299563.1|SSC299563 Scorpidium scorpioides mitochondrial pa...	82	2e-12
56	emb|AJ299562.1|HOC299562 Hygrohypnum ochraceum mitochondrial par...	82	2e-12
57	emb|AJ299560.1|TNI299560 Tomentypnum nitens mitochondrial partia...	82	2e-12
58	emb|AJ299558.1|FAN299558 Fontinalis antipyretica mitochondrial p...	82	2e-12
59	emb|AJ299555.1|RPU299555 Rhacocarpus purpurascens mitochondrial ...	82	2e-12
60	emb|AJ299553.1|UCR299553 Ulota crispa mitochondrial partial nad2...	82	2e-12
61	emb|AJ299552.1|MHO299552 Mnium hornum mitochondrial partial nad2...	82	2e-12
62	emb|AJ299550.1|PNU299550 Pohlia nutans mitochondrial partial nad...	82	2e-12
63	emb|AJ299548.1|SFA299548 Plagiopus oederi mitochondrial partial ...	82	2e-12
64	emb|AJ299547.1|BHA299547 Bartramia halleriana mitochondrial part...	82	2e-12
65	emb|AJ299542.1|RLA299542 Racomitrium lanuginosum mitochondrial p...	82	2e-12
66	emb|AJ299540.1|LGL299540 Leucobryum glaucum mitochondrial partia...	82	2e-12
67	emb|AJ299539.1|DCY299539 Ditrichum cylindricum mitochondrial par...	82	2e-12
68	emb|AJ299538.1|CPU299538 Ceratodon purpureus mitochondrial parti...	82	2e-12
69	emb|AJ299537.1|OMO299537 Orthodicranum montanum mitochondrial pa...	82	2e-12
70	emb|AJ299535.1|PPA299535 Physcomitrella patens mitochondrial par...	82	2e-12
71	emb|AJ299534.1|FHY299534 Funaria hygrometrica mitochondrial part...	82	2e-12
72	emb|AJ299533.1|EST299533 Encalypta streptocarpa mitochondrial pa...	82	2e-12
73	emb|AJ299532.1|TBA299532 Timmia bavarica mitochondrial partial n...	82	2e-12
74	emb|AJ299530.1|DSE299530 Diphyscium sessile mitochondrial partia...	82	2e-12
75	emb|AJ299526.1|ANI299526 Andreaea nivalis mitochondrial partial ...	82	2e-12
76	emb|AJ299525.1|TLE299525 Takakia lepidozioides mitochondrial par...	82	2e-12
77	emb|AJ409122.1|FPU409122 Fossombronia pusilla mitochondrial part...	82	2e-12
78	emb|AJ409118.1|PLA409118 Phaeoceros laevis mitochondrial partial...	82	2e-12
79	emb|AJ344062.1|RNA344062 Ricciocarpos natans mitochondrial parti...	82	2e-12
80	emb|AJ344061.1|LCR344061 Lunularia cruciata mitochondrial partia...	82	2e-12
81	emb|AJ344060.1|CCO344060 Corsinia coriandrina mitochondrial part...	82	2e-12
82	emb|AJ344059.1|BRO344059 Bucegia romanica mitochondrial partial ...	82	2e-12
83	emb|AJ344064.1|PAS344064 Plagiochila asplenioides mitochondrial ...	78	3e-11
84	emb|AJ299559.1|TAL299559 Thamnobryum alopecurum mitochondrial pa...	74	5e-10
85	emb|AJ299557.1|HTR299557 Homalia trichomanoides mitochondrial pa...	74	5e-10
86	emb|AJ299556.1|PGR299556 Pterogonium gracile mitochondrial parti...	74	5e-10
87	emb|AJ299554.1|HCI299554 Hedwigia ciliata mitochondrial partial ...	74	5e-10
88	emb|AJ299551.1|OLI299551 Orthodontium lineare mitochondrial part...	74	5e-10
89	emb|AJ299549.1|AAN299549 Aulacomnium androgynum mitochondrial pa...	74	5e-10
90	emb|AJ299546.1|SPE299546 Schistostega pennata mitochondrial part...	74	5e-10
91	emb|AJ299541.1|FCR299541 Fissidens cristatus mitochondrial parti...	74	5e-10
92	emb|AJ409124.1|SDO409124 Sphaerocarpos donnelli mitochondrial pa...	74	5e-10
93	emb|AJ409123.1|HMN409123 Haplomitrium mnioides mitochondrial par...	74	5e-10
94	emb|AJ409126.1|GBI409126 Ginkgo biloba mitochondrial partial nad...	70	8e-09
95	emb|AJ409117.1|AAG409117 Anthoceros agrestis mitochondrial parti...	66	1e-07
96	gb|U93501.1|HVU93501 Hordeum vulgare hypothetical protein 256 (E...	62	2e-06
97	gb|U93499.1|ASU93499 Aegilops speltoides var. speltoides hypothe...	62	2e-06
98	emb|AJ409127.1|TBA409127 Taxus baccata mitochondrial partial nad...	62	2e-06
99	dbj|D13109.1|RICMT13 Oryza sativa (japonica cultivar-group) mito...	60	8e-06
100	dbj|D78336.1| Oryza sativa (japonica cultivar-group) mitochondri...	60	8e-06
101	emb|AJ344063.1|PEP344063 Pellia epiphylla mitochondrial partial ...	58	3e-05
102	emb|X56186.1|MITACOX1 Triticum timopheevii x Triticum aestivum m...	54	5e-04
103	gb|L10365.1|WHTMTUNPRB Triticum aestivum x Triticum timopheevi u...	54	5e-04
104	gb|L10364.1|WHTMTUNPRA Triticum aestivum x Triticum timopheevi u...	54	5e-04
105	gb|L10332.1|WHTMTUNNN Triticum timopheevii mitochondrion open re...	54	5e-04
106	gb|U93504.1|TMU93504 Triticum monococcum hypothetical protein 25...	54	5e-04
107	gb|U93502.1|SCU93502 Secale cereale hypothetical protein 256 (EL...	54	5e-04
108	gb|U93498.1|ASU93498 Aegilops speltoides var. speltoides hypothe...	54	5e-04
109	gb|U93495.1|ABU93495 Aegilops bicornis hypothetical protein 256 ...	54	5e-04
110	gb|U46764.1|ACU46764 Aegilops columnaris cytochrome c oxidase su...	54	5e-04
111	emb|AJ409119.1|IDU409119 Isoetes durieui mitochondrial partial n...	52	0.002
112	gb|U93497.1|ASU93497 Aegilops sharonensis hypothetical protein 2...	50	0.008
113	gb|AY548063.1| Myriocolea irrorata NADH dehydrogenase subunit 4 ...	46	0.12
114	gb|AY548061.1| Cyclolejeunea peruviana NADH dehydrogenase subuni...	46	0.12
115	gb|AY548060.1| Ceratolejeunea filaria NADH dehydrogenase subunit...	46	0.12
116	gb|U93503.1|TBU93503 Triticum boeoticum subsp. boeoticum hypothe...	46	0.12
117	gb|U93500.1|PTU93500 Aegilops tauschii hypothetical protein 256 ...	46	0.12
118	gb|U93496.1|ASU93496 Aegilops searsii hypothetical protein 256 (...	46	0.12
119	dbj|D13111.1|RICMT15 Oryza sativa (japonica cultivar-group) mito...	46	0.12
120	gb|AC090061.15| Homo sapiens 12 BAC RP11-637A17 (Roswell Park Ca...	44	0.47
121	dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome	44	0.47
122	gb|AC008651.7|AC008651 Homo sapiens chromosome 5 clone CTB-187A7...	44	0.47
123	emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clon...	44	0.47
124	emb|AL732337.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...	44	0.47
125	gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome...	42	1.9
126	gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, comp...	42	1.9
127	gb|AC162380.4| Pan troglodytes BAC clone CH251-629G18 from chrom...	42	1.9
128	gb|AC147087.3| Pan troglodytes BAC clone RP43-59E13 from 7, comp...	42	1.9
129	gb|AY267353.1| Chara vulgaris mitochondrion, complete genome	42	1.9
130	emb|AL355611.11| Human DNA sequence from clone RP11-430K22 on ch...	42	1.9
131	gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence	42	1.9
132	emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4,...	42	1.9
133	gb|AC183776.2| Pan troglodytes BAC clone CH251-246H3 from chromo...	42	1.9
134	gb|AC097626.9| Homo sapiens X BAC RP11-527B14 (Roswell Park Canc...	42	1.9
135	gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H...	42	1.9
136	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.9
137	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.9
138	gb|AC002064.1|HSAC002064 Human BAC clone RG016J04 from 7q21, com...	42	1.9
139	emb|CT025553.4| Mouse DNA sequence from clone RP23-470O20 on chr...	40	7.4
140	gb|U28929.1| Caenorhabditis elegans cosmid F09C12, complete sequ...	40	7.4
141	emb|AL713873.11| Human DNA sequence from clone RP11-10L1 on chro...	40	7.4
142	emb|AL162413.26| Human DNA sequence from clone RP11-109M17 on ch...	40	7.4
143	emb|AL161912.15| Human DNA sequence from clone RP11-403N16 on ch...	40	7.4
144	gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosom...	40	7.4
145	gb|AC092979.3| Homo sapiens 3 BAC RP11-680B3 (Roswell Park Cance...	40	7.4
146	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	40	7.4
147	gb|AC008992.7|AC008992 Homo sapiens chromosome 19 clone LLNLF-95...	40	7.4
148	gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Canc...	40	7.4
149	gb|AE000789.1| Borrelia burgdorferi B31 plasmid lp28-4, complete...	40	7.4
150	dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic D...	40	7.4
151	gb|AC004823.1|AC004823 Homo sapiens PAC clone RP1-172A13 from Xq...	40	7.4
152	gb|AC007796.1|AC007796 Homo sapiens chromosome 19, cosmid F5119,...	40	7.4
153	gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome	40	7.4
154	gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosom...	40	7.4
155	emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on ch...	40	7.4

---

>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score =  811 bits (409), Expect = 0.0
 Identities = 440/455 (96%)
 Strand = Plus / Minus

                                                                          
Query: 91     aagatcgaggtttttcttcttactaactttgtcaaagaggctnnnnnnncaataaatgac 150
              ||||||||||||||||||||||||||||||||||||||||||       |||||||||||
Sbjct: 182744 aagatcgaggtttttcttcttactaactttgtcaaagaggctaaaaaaacaataaatgac 182685

                                                                          
Query: 151    caacgaaacttcgagtgagtaggataaggaggagtagtcggaggatctgagaagggaatt 210
              |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 182684 caacgaaacttcgagtgagtaggataaggaggagtagtcggaggatcttagaagggaatt 182625

                                                                          
Query: 211    agagaaaaaagagcagcagctcagtaataacacctaggcttttgaattaactctgcgatt 270
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182624 agagaaaaaagagcagcagctcagtaataacacctaggcttttgaattaactctgcgatt 182565

                                                                          
Query: 271    tggaagacggaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaat 330
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182564 tggaagacggaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaat 182505

                                                                          
Query: 331    cnnnnnnnagcggtttccccagagatctttatcattaacgcaaccttcattttgctcatt 390
              |       ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182504 ctttttttagcggtttccccagagatctttatcattaacgcaaccttcattttgctcatt 182445

                                                                          
Query: 391    catggagttgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtg 450
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182444 catggagttgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtg 182385

                                                                          
Query: 451    ggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggag 510
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182384 ggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggag 182325

                                                 
Query: 511    gagctattatcgcccagctccctaacctaatgcgg 545
              |||||||||||||||||||||||||||||||||||
Sbjct: 182324 gagctattatcgcccagctccctaacctaatgcgg 182290



 Score =  180 bits (91), Expect = 3e-42
 Identities = 94/95 (98%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagggtcttcccatctcttcttgttattgtctttgtccgagatgcccggttcaccaaat 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6680 gaagggtcttcccatctcttcttgttattgtctttgtccgagatgcccggttcaccaaat 6739

                                               
Query: 62   gataattcaaatcgagattgtgtgaagtaaagatc 96
            || ||||||||||||||||||||||||||||||||
Sbjct: 6740 gagaattcaaatcgagattgtgtgaagtaaagatc 6774

---

>emb|Y14433.1|MTTANAD2 Triticum aestivum mitochondrial nad2 gene, exon 1 and 2 and
            join-across CDS
          Length = 4293

 Score =  803 bits (405), Expect = 0.0
 Identities = 436/451 (96%)
 Strand = Plus / Plus

                                                                        
Query: 91   aagatcgaggtttttcttcttactaactttgtcaaagaggctnnnnnnncaataaatgac 150
            ||||||||||||||||||||||||||||||||||||||||||       |||||||||||
Sbjct: 742  aagatcgaggtttttcttcttactaactttgtcaaagaggctaaaaaaacaataaatgac 801

                                                                        
Query: 151  caacgaaacttcgagtgagtaggataaggaggagtagtcggaggatctgagaagggaatt 210
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 802  caacgaaacttcgagtgagtaggataaggaggagtagtcggaggatcttagaagggaatt 861

                                                                        
Query: 211  agagaaaaaagagcagcagctcagtaataacacctaggcttttgaattaactctgcgatt 270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862  agagaaaaaagagcagcagctcagtaataacacctaggcttttgaattaactctgcgatt 921

                                                                        
Query: 271  tggaagacggaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaat 330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922  tggaagacggaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaat 981

                                                                        
Query: 331  cnnnnnnnagcggtttccccagagatctttatcattaacgcaaccttcattttgctcatt 390
            |       ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982  ctttttttagcggtttccccagagatctttatcattaacgcaaccttcattttgctcatt 1041

                                                                        
Query: 391  catggagttgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtg 450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 catggagttgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtg 1101

                                                                        
Query: 451  ggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggag 510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 ggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggag 1161

                                           
Query: 511  gagctattatcgcccagctccctaacctaat 541
            |||||||||||||||||||||||||||||||
Sbjct: 1162 gagctattatcgcccagctccctaacctaat 1192

---

>emb|Y14435.1|MTTANADH2 Triticum aestivum mitochondrial NADH dehydrogenase subunit 2
          Length = 1776

 Score =  662 bits (334), Expect = 0.0
 Identities = 368/384 (95%)
 Strand = Plus / Plus

                                                                       
Query: 91  aagatcgaggtttttcttcttactaactttgtcaaagaggctnnnnnnncaataaatgac 150
           ||||||||||||||||||||||||||||||||||||||||||       |||||||||||
Sbjct: 40  aagatcgaggtttttcttcttactaactttgtcaaagaggctaaaaaaacaataaatgac 99

                                                                       
Query: 151 caacgaaacttcgagtgagtaggataaggaggagtagtcggaggatctgagaagggaatt 210
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 100 caacgaaacttcgagtgagtaggataaggaggagtagtcggaggatcttagaagggaatt 159

                                                                       
Query: 211 agagaaaaaagagcagcagctcagtaataacacctaggcttttgaattaactctgcgatt 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 agagaaaaaagagcagcagctcagtaataacacctaggcttttgaattaactctgcgatt 219

                                                                       
Query: 271 tggaagacggaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaat 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tggaagacggaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaat 279

                                                                       
Query: 331 cnnnnnnnagcggtttccccagagatctttatcattaacgcaaccttcattttgctcatt 390
           |       |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ctttttttagcggttttcccagagatctttatcattaacgcaaccttcattttgctcatt 339

                                                                       
Query: 391 catggagttgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtg 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 catggagttgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtg 399

                                   
Query: 451 ggttggcttggattacttagtgtt 474
           ||||||||||||||||||||||||
Sbjct: 400 ggttggcttggattacttagtgtt 423

---

>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
              complete genome
          Length = 491515

 Score =  454 bits (229), Expect = e-124
 Identities = 252/262 (96%)
 Strand = Plus / Minus

                                                                          
Query: 284    aaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnnagcgg 343
              |||||||||  |||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 406537 aaatgaaagctgaagaagttatcgaaactcggaaccacatgttcaatctttttttagcgg 406478

                                                                          
Query: 344    tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 403
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406477 tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 406418

                                                                          
Query: 404    ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 463
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406417 ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 406358

                                                                          
Query: 464    tacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctattatcgc 523
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 406357 tacttagtgttgcgcgcctaggagggcagcgcgcttggggtgcggaggagctattatcgc 406298

                                    
Query: 524    ccagctccctaacctaatgcgg 545
              ||||||||||||||||||||||
Sbjct: 406297 ccagctccctaacctaatgcgg 406276



 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                          
Query: 249    cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
              ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 339383 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 339442

                  
Query: 309    aact 312
              ||||
Sbjct: 339443 aact 339446



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 142    ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
              ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 338390 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 338443



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 142    ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
              ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 295553 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 295606



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 142   ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
             ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 62559 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 62506

---

>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
              complete genome
          Length = 490673

 Score =  454 bits (229), Expect = e-124
 Identities = 252/262 (96%)
 Strand = Plus / Minus

                                                                          
Query: 284    aaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnnagcgg 343
              |||||||||  |||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 405713 aaatgaaagctgaagaagttatcgaaactcggaaccacatgttcaatctttttttagcgg 405654

                                                                          
Query: 344    tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 403
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405653 tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 405594

                                                                          
Query: 404    ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 463
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405593 ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 405534

                                                                          
Query: 464    tacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctattatcgc 523
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 405533 tacttagtgttgcgcgcctaggagggcagcgcgcttggggtgcggaggagctattatcgc 405474

                                    
Query: 524    ccagctccctaacctaatgcgg 545
              ||||||||||||||||||||||
Sbjct: 405473 ccagctccctaacctaatgcgg 405452



 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                          
Query: 249    cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
              ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 338573 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 338632

                  
Query: 309    aact 312
              ||||
Sbjct: 338633 aact 338636



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 142    ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
              ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 337580 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 337633



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 142    ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
              ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 294743 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 294796



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 142   ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
             ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 62064 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 62011

---

>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion,
              complete genome
          Length = 490669

 Score =  454 bits (229), Expect = e-124
 Identities = 252/262 (96%)
 Strand = Plus / Minus

                                                                          
Query: 284    aaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnnagcgg 343
              |||||||||  |||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 405709 aaatgaaagctgaagaagttatcgaaactcggaaccacatgttcaatctttttttagcgg 405650

                                                                          
Query: 344    tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 403
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405649 tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 405590

                                                                          
Query: 404    ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 463
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405589 ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 405530

                                                                          
Query: 464    tacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctattatcgc 523
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 405529 tacttagtgttgcgcgcctaggagggcagcgcgcttggggtgcggaggagctattatcgc 405470

                                    
Query: 524    ccagctccctaacctaatgcgg 545
              ||||||||||||||||||||||
Sbjct: 405469 ccagctccctaacctaatgcgg 405448



 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                          
Query: 249    cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
              ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 338570 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 338629

                  
Query: 309    aact 312
              ||||
Sbjct: 338630 aact 338633



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 142    ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
              ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 337577 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 337630



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 142    ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
              ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 294740 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 294793



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 142   ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
             ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 62064 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 62011

---

>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
          Length = 490520

 Score =  454 bits (229), Expect = e-124
 Identities = 252/262 (96%)
 Strand = Plus / Minus

                                                                          
Query: 284    aaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnnagcgg 343
              |||||||||  |||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 405579 aaatgaaagctgaagaagttatcgaaactcggaaccacatgttcaatctttttttagcgg 405520

                                                                          
Query: 344    tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 403
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405519 tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 405460

                                                                          
Query: 404    ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 463
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405459 ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 405400

                                                                          
Query: 464    tacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctattatcgc 523
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 405399 tacttagtgttgcgcgcctaggagggcagcgcgcttggggtgcggaggagctattatcgc 405340

                                    
Query: 524    ccagctccctaacctaatgcgg 545
              ||||||||||||||||||||||
Sbjct: 405339 ccagctccctaacctaatgcgg 405318



 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                          
Query: 249    cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
              ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 338428 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 338487

                  
Query: 309    aact 312
              ||||
Sbjct: 338488 aact 338491



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 142    ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
              ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 337435 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 337488



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 142    ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
              ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 294592 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 294645



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 142   ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
             ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 62014 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 61961

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  438 bits (221), Expect = e-120
 Identities = 250/262 (95%)
 Strand = Plus / Plus

                                                                           
Query: 284     aaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnnagcgg 343
               |||||||||  |||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 4639515 aaatgaaagctgaagaagttatcgaaactcggaaccacatgttcaatctttttttagcgg 4639574

                                                                           
Query: 344     tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 403
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4639575 tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 4639634

                                                                           
Query: 404     ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 463
               ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4639635 ttagtacctctaagaaagatgattatccaccattagttagtaatgtgggttggcttggat 4639694

                                                                           
Query: 464     tacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctattatcgc 523
               ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4639695 tacttagtgttgcgcgcctaggagggcagcgcgcttggggtgcggaggagctattatcgc 4639754

                                     
Query: 524     ccagctccctaacctaatgcgg 545
               | ||||||||||||||||||||
Sbjct: 4639755 ctagctccctaacctaatgcgg 4639776



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                           
Query: 249     cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
               ||||||||||||||||||||||| ||||| ||||||||||||||  ||||||||||||||
Sbjct: 4645016 cttttgaattaactctgcgattttgaagatggaggaaatgaaagctgaagaagttatcga 4645075

                   
Query: 309     aact 312
               ||||
Sbjct: 4645076 aact 4645079



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                     
Query: 142     ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
               ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 4644022 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 4644075

---

>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0681H07
          Length = 144722

 Score =  438 bits (221), Expect = e-120
 Identities = 250/262 (95%)
 Strand = Plus / Plus

                                                                         
Query: 284   aaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnnagcgg 343
             |||||||||  |||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 92384 aaatgaaagctgaagaagttatcgaaactcggaaccacatgttcaatctttttttagcgg 92443

                                                                         
Query: 344   tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 403
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92444 tttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagttgtat 92503

                                                                         
Query: 404   ttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggcttggat 463
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 92504 ttagtacctctaagaaagatgattatccaccattagttagtaatgtgggttggcttggat 92563

                                                                         
Query: 464   tacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctattatcgc 523
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 92564 tacttagtgttgcgcgcctaggagggcagcgcgcttggggtgcggaggagctattatcgc 92623

                                   
Query: 524   ccagctccctaacctaatgcgg 545
             | ||||||||||||||||||||
Sbjct: 92624 ctagctccctaacctaatgcgg 92645



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                         
Query: 249   cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
             ||||||||||||||||||||||| ||||| ||||||||||||||  ||||||||||||||
Sbjct: 97885 cttttgaattaactctgcgattttgaagatggaggaaatgaaagctgaagaagttatcga 97944

                 
Query: 309   aact 312
             ||||
Sbjct: 97945 aact 97948



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 142   ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
             ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 96891 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 96944

---

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  412 bits (208), Expect = e-112
 Identities = 249/266 (93%), Gaps = 8/266 (3%)
 Strand = Plus / Minus

                                                                          
Query: 280    gaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnna 339
              ||||||||||||| ||||||||||||||||||        ||||||||||||       |
Sbjct: 511418 gaggaaatgaaagcagaagaagttatcgaaac--------acatgttcaatcttttttta 511367

                                                                          
Query: 340    gcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagtt 399
              ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 511366 gcggtttccccagagatctttctcattaacgcaaccttcattttgctcattcatggagtt 511307

                                                                          
Query: 400    gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 459
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511306 gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 511247

                                                                          
Query: 460    ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 519
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511246 ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 511187

                                        
Query: 520    tcgcccagctccctaacctaatgcgg 545
              ||||||||||||||||||||||||||
Sbjct: 511186 tcgcccagctccctaacctaatgcgg 511161

---

>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
             genome
          Length = 701046

 Score =  412 bits (208), Expect = e-112
 Identities = 249/266 (93%), Gaps = 8/266 (3%)
 Strand = Plus / Minus

                                                                         
Query: 280   gaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnna 339
             ||||||||||||| ||||||||||||||||||        ||||||||||||       |
Sbjct: 70358 gaggaaatgaaagcagaagaagttatcgaaac--------acatgttcaatcttttttta 70307

                                                                         
Query: 340   gcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagtt 399
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 70306 gcggtttccccagagatctttctcattaacgcaaccttcattttgctcattcatggagtt 70247

                                                                         
Query: 400   gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 459
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70246 gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 70187

                                                                         
Query: 460   ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 519
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70186 ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 70127

                                       
Query: 520   tcgcccagctccctaacctaatgcgg 545
             ||||||||||||||||||||||||||
Sbjct: 70126 tcgcccagctccctaacctaatgcgg 70101

---

>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  412 bits (208), Expect = e-112
 Identities = 249/266 (93%), Gaps = 8/266 (3%)
 Strand = Plus / Plus

                                                                          
Query: 280    gaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnna 339
              ||||||||||||| ||||||||||||||||||        ||||||||||||       |
Sbjct: 510546 gaggaaatgaaagcagaagaagttatcgaaac--------acatgttcaatcttttttta 510597

                                                                          
Query: 340    gcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagtt 399
              ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 510598 gcggtttccccagagatctttctcattaacgcaaccttcattttgctcattcatggagtt 510657

                                                                          
Query: 400    gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 459
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510658 gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 510717

                                                                          
Query: 460    ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 519
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510718 ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 510777

                                        
Query: 520    tcgcccagctccctaacctaatgcgg 545
              ||||||||||||||||||||||||||
Sbjct: 510778 tcgcccagctccctaacctaatgcgg 510803



 Score =  412 bits (208), Expect = e-112
 Identities = 249/266 (93%), Gaps = 8/266 (3%)
 Strand = Plus / Minus

                                                                         
Query: 280   gaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnna 339
             ||||||||||||| ||||||||||||||||||        ||||||||||||       |
Sbjct: 83345 gaggaaatgaaagcagaagaagttatcgaaac--------acatgttcaatcttttttta 83294

                                                                         
Query: 340   gcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagtt 399
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 83293 gcggtttccccagagatctttctcattaacgcaaccttcattttgctcattcatggagtt 83234

                                                                         
Query: 400   gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 459
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83233 gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 83174

                                                                         
Query: 460   ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 519
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83173 ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 83114

                                       
Query: 520   tcgcccagctccctaacctaatgcgg 545
             ||||||||||||||||||||||||||
Sbjct: 83113 tcgcccagctccctaacctaatgcgg 83088

---

>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  412 bits (208), Expect = e-112
 Identities = 249/266 (93%), Gaps = 8/266 (3%)
 Strand = Plus / Plus

                                                                         
Query: 280   gaggaaatgaaagtagaagaagttatcgaaactcggaaccacatgttcaatcnnnnnnna 339
             ||||||||||||| ||||||||||||||||||        ||||||||||||       |
Sbjct: 90658 gaggaaatgaaagcagaagaagttatcgaaac--------acatgttcaatcttttttta 90709

                                                                         
Query: 340   gcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagtt 399
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 90710 gcggtttccccagagatctttctcattaacgcaaccttcattttgctcattcatggagtt 90769

                                                                         
Query: 400   gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 459
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90770 gtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggctt 90829

                                                                         
Query: 460   ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 519
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90830 ggattacttagtgttgcgcgcctaggagggcagcgcgcttgggatgcggaggagctatta 90889

                                       
Query: 520   tcgcccagctccctaacctaatgcgg 545
             ||||||||||||||||||||||||||
Sbjct: 90890 tcgcccagctccctaacctaatgcgg 90915

---

>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score =  357 bits (180), Expect = 2e-95
 Identities = 216/229 (94%), Gaps = 1/229 (0%)
 Strand = Plus / Minus

                                                                          
Query: 318    ccacatgttcaatcnnnnnnnagcggtttccccagagatctttatcattaacgcaacctt 377
              ||||||||||||||       |||||||||||||||||||||||||||||| ||||||||
Sbjct: 427375 ccacatgttcaatctttttttagcggtttccccagagatctttatcattaatgcaacctt 427316

                                                                          
Query: 378    cattttgctcattcatggagttgtatttagtacctctaagaaagatgattatccaccgtt 437
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 427315 cattttgctcattcatggagttgtatttagtacctctaagaaatatgattatccaccgtt 427256

                                                                          
Query: 438    agttagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 497
              ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427255 agtcagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 427196

                                                               
Query: 498    -ttgggatgcggaggagctattatcgcccagctccctaacctaatgcgg 545
               ||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 427195 tttgggatgcggaggagctattatcgtccagctccctaacctaaagcgg 427147



 Score =  357 bits (180), Expect = 2e-95
 Identities = 216/229 (94%), Gaps = 1/229 (0%)
 Strand = Plus / Minus

                                                                          
Query: 318    ccacatgttcaatcnnnnnnnagcggtttccccagagatctttatcattaacgcaacctt 377
              ||||||||||||||       |||||||||||||||||||||||||||||| ||||||||
Sbjct: 278125 ccacatgttcaatctttttttagcggtttccccagagatctttatcattaatgcaacctt 278066

                                                                          
Query: 378    cattttgctcattcatggagttgtatttagtacctctaagaaagatgattatccaccgtt 437
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 278065 cattttgctcattcatggagttgtatttagtacctctaagaaatatgattatccaccgtt 278006

                                                                          
Query: 438    agttagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 497
              ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278005 agtcagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 277946

                                                               
Query: 498    -ttgggatgcggaggagctattatcgcccagctccctaacctaatgcgg 545
               ||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 277945 tttgggatgcggaggagctattatcgtccagctccctaacctaaagcgg 277897



 Score =  357 bits (180), Expect = 2e-95
 Identities = 216/229 (94%), Gaps = 1/229 (0%)
 Strand = Plus / Minus

                                                                         
Query: 318   ccacatgttcaatcnnnnnnnagcggtttccccagagatctttatcattaacgcaacctt 377
             ||||||||||||||       |||||||||||||||||||||||||||||| ||||||||
Sbjct: 76625 ccacatgttcaatctttttttagcggtttccccagagatctttatcattaatgcaacctt 76566

                                                                         
Query: 378   cattttgctcattcatggagttgtatttagtacctctaagaaagatgattatccaccgtt 437
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 76565 cattttgctcattcatggagttgtatttagtacctctaagaaatatgattatccaccgtt 76506

                                                                         
Query: 438   agttagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 497
             ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76505 agtcagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 76446

                                                              
Query: 498   -ttgggatgcggaggagctattatcgcccagctccctaacctaatgcgg 545
              ||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 76445 tttgggatgcggaggagctattatcgtccagctccctaacctaaagcgg 76397

---

>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 368801

 Score =  349 bits (176), Expect = 6e-93
 Identities = 201/208 (96%), Gaps = 1/208 (0%)
 Strand = Plus / Plus

                                                                          
Query: 339    agcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagt 398
              |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 240490 agcggtttccccagagatctttctcattaatgcaaccttcattttgctcattcatggagt 240549

                                                                          
Query: 399    tgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggct 458
              | | |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 240550 tatttttagtacctctaagaaatatgattatccaccgttagtcagtaatgtgggttggct 240609

                                                                          
Query: 459    tggattacttagtgttgcgcgcctaggagggcagcgcgc-ttgggatgcggaggagctat 517
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 240610 tggattacttagtgttgcgcgcctaggagggcagcgcgctttgggatgcggaggagctat 240669

                                          
Query: 518    tatcgcccagctccctaacctaatgcgg 545
              ||||||||||||||||||||||||||||
Sbjct: 240670 tatcgcccagctccctaacctaatgcgg 240697

---

>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 501020

 Score =  343 bits (173), Expect = 4e-91
 Identities = 198/205 (96%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                          
Query: 339    agcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagt 398
              |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 144224 agcggtttccccagagatctttctcattaatgcaaccttcattttgctcattcatggagt 144283

                                                                          
Query: 399    tgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggct 458
              | | |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 144284 tatttttagtacctctaagaaatatgattatccaccgttagtcagtaatgtgggttggct 144343

                                                                          
Query: 459    tggattacttagtgttgcgcgcctaggagggcagcgcgc-ttgggatgcggaggagctat 517
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 144344 tggattacttagtgttgcgcgcctaggagggcagcgcgctttgggatgcggaggagctat 144403

                                       
Query: 518    tatcgcccagctccctaacctaatg 542
              |||||||||||||||||||||||||
Sbjct: 144404 tatcgcccagctccctaacctaatg 144428

---

>gb|AY672909.1| Dimocarpus longan NADH dehydrogenase subunit 2-like gene, complete
           sequence; mitochondrial
          Length = 780

 Score =  327 bits (165), Expect = 2e-86
 Identities = 213/230 (92%), Gaps = 1/230 (0%)
 Strand = Plus / Plus

                                                                       
Query: 317 accacatgttcaatcnnnnnnnagcggtttccccagagatctttatcattaacgcaacct 376
           |||||||||||||||       |||||||||||||||||||||||||||||| |||| ||
Sbjct: 26  accacatgttcaatctttttttagcggtttccccagagatctttatcattaatgcaatct 85

                                                                       
Query: 377 tcattttgctcattcatggagttgtatttagtacctctaagaaagatgattatccaccgt 436
            ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||
Sbjct: 86  ccattttgctcattcatggagttgtatttagtacctctaagaaatatgattctccgccgt 145

                                                                       
Query: 437 tagttagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcg 496
           |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tagtcagtagtgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcg 205

                                                             
Query: 497 c-ttgggatgcggaggagctattatcgcccagctccctaacctaatgcgg 545
           | ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 206 ctttgggatgcggaggagctattatcgcccagccccctaacctaatgcgg 255

---

>gb|AF034120.1|PGNAD2S01 Panax ginseng NADH-dehydrogenase subunit 2 (NAD2) gene,
           mitochondrial gene encoding mitochondrial protein, exon
           a
          Length = 376

 Score =  325 bits (164), Expect = 9e-86
 Identities = 213/229 (93%), Gaps = 2/229 (0%)
 Strand = Plus / Plus

                                                                       
Query: 318 ccacatgttcaatcnnnnnnnagcggtttccccagagatctttatcattaacgcaacctt 377
           ||||||||||||||       |||||||||||||||||||||||||||||| ||||||||
Sbjct: 19  ccacatgttcaatctttttttagcggtttccccagagatctttatcattaatgcaacctt 78

                                                                       
Query: 378 cattttgctcattcatggagttgtatttagtacctctaagaaagatgattatccaccgtt 437
           ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 79  cattttgctcattcatggacttgtatttagtacgtctaagaaatatgattatccaccgtt 138

                                                                       
Query: 438 agttagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 497
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 139 agtcagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagc-cgc 197

                                                            
Query: 498 -ttgggatgcggaggagctattatcgcccagctccctaacctaatgcgg 545
            |||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 198 tttgggaagcggagcagctattatcgcccagctccctaacctaatgcgg 246

---

>gb|M81725.1|OBENAD201 Oenothera berteriana NADH dehydrogenase subunit 2 (nad2) gene,
           exons 1-2
          Length = 3162

 Score =  323 bits (163), Expect = 3e-85
 Identities = 210/228 (92%)
 Strand = Plus / Plus

                                                                       
Query: 318 ccacatgttcaatcnnnnnnnagcggtttccccagagatctttatcattaacgcaacctt 377
           ||||||||||||||       |||||||||||||||||||||||||||||| ||||||| 
Sbjct: 516 ccacatgttcaatctttttttagcggtttccccagagatctttatcattaatgcaacctc 575

                                                                       
Query: 378 cattttgctcattcatggagttgtatttagtacctctaagaaagatgattatccaccgtt 437
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 576 cattttgctcattcatggagttgtttttagtacctctaagaaagacgattatccaccgtt 635

                                                                       
Query: 438 agttagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 497
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| 
Sbjct: 636 agtcagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcacggcgt 695

                                                           
Query: 498 ttgggatgcggaggagctattatcgcccagctccctaacctaatgcgg 545
           |||||||||||||||||||||||||||||||||||   ||||||||||
Sbjct: 696 ttgggatgcggaggagctattatcgcccagctcccattcctaatgcgg 743

---

>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome
          Length = 221853

 Score =  315 bits (159), Expect = 8e-83
 Identities = 207/224 (92%), Gaps = 1/224 (0%)
 Strand = Plus / Minus

                                                                          
Query: 318    ccacatgttcaatcnnnnnnnagcggtttccccagagatctttatcattaacgcaacctt 377
              ||||||||||||||       |||||||||||||||||||||||||||||| ||||||| 
Sbjct: 219206 ccacatgttcaatctttttttagcggtttccccagagatctttatcattaatgcaacctc 219147

                                                                          
Query: 378    cattttgctcattcatggagttgtatttagtacctctaagaaagatgattatccaccgtt 437
              ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 219146 cattttgctcattcatggagttgtatttagtacctctaagaaatatgattatccgccgtt 219087

                                                                          
Query: 438    agttagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 497
              ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219086 agccagtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc 219027

                                                          
Query: 498    tt-gggatgcggaggagctattatcgcccagctccctaacctaa 540
              || ||||||| ||||||||||||||||||||| ||||| |||||
Sbjct: 219026 ttggggatgcagaggagctattatcgcccagccccctaccctaa 218983

---

>gb|BT011704.1| Arabidopsis thaliana At2g07733 gene, complete cds
          Length = 258

 Score =  307 bits (155), Expect = 2e-80
 Identities = 192/203 (94%), Gaps = 1/203 (0%)
 Strand = Plus / Plus

                                                                       
Query: 339 agcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagt 398
           |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 51  agcggtttccccagagatctttatcattaatgcaacctccattttgctcattcatggagt 110

                                                                       
Query: 399 tgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggct 458
           |||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||
Sbjct: 111 tgtatttagtacctctaagaaatatgattatccgccgttagccagtaatgtgggttggct 170

                                                                       
Query: 459 tggattacttagtgttgcgcgcctaggagggcagcgcgctt-gggatgcggaggagctat 517
           ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 171 tggattacttagtgttgcgcgcctaggagggcagcgcgcttggggatgcagaggaactat 230

                                  
Query: 518 tatcgcccagctccctaacctaa 540
           ||||||||||| ||||| |||||
Sbjct: 231 tatcgcccagccccctaccctaa 253

---

>gb|AC006225.3| Arabidopsis thaliana chromosome 2 BAC T5E7 genomic sequence, complete
             sequence
          Length = 88249

 Score =  307 bits (155), Expect = 2e-80
 Identities = 192/203 (94%), Gaps = 1/203 (0%)
 Strand = Plus / Plus

                                                                         
Query: 339   agcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagt 398
             |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 51454 agcggtttccccagagatctttatcattaatgcaacctccattttgctcattcatggagt 51513

                                                                         
Query: 399   tgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggct 458
             |||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||
Sbjct: 51514 tgtatttagtacctctaagaaatatgattatccgccgttagccagtaatgtgggttggct 51573

                                                                         
Query: 459   tggattacttagtgttgcgcgcctaggagggcagcgcgctt-gggatgcggaggagctat 517
             ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 51574 tggattacttagtgttgcgcgcctaggagggcagcgcgcttggggatgcagaggaactat 51633

                                    
Query: 518   tatcgcccagctccctaacctaa 540
             ||||||||||| ||||| |||||
Sbjct: 51634 tatcgcccagccccctaccctaa 51656

---

>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome
          Length = 366924

 Score =  307 bits (155), Expect = 2e-80
 Identities = 192/203 (94%), Gaps = 1/203 (0%)
 Strand = Plus / Minus

                                                                         
Query: 339   agcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagt 398
             |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 81247 agcggtttccccagagatctttatcattaatgcaacctccattttgctcattcatggagt 81188

                                                                         
Query: 399   tgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggct 458
             |||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||
Sbjct: 81187 tgtatttagtacctctaagaaatatgattatccgccgttagccagtaatgtgggttggct 81128

                                                                         
Query: 459   tggattacttagtgttgcgcgcctaggagggcagcgcgctt-gggatgcggaggagctat 517
             ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 81127 tggattacttagtgttgcgcgcctaggagggcagcgcgcttggggatgcagaggaactat 81068

                                    
Query: 518   tatcgcccagctccctaacctaa 540
             ||||||||||| ||||| |||||
Sbjct: 81067 tatcgcccagccccctaccctaa 81045

---

>emb|X96535.1|ATRPSNAD A.thaliana mitochondrial rps4 gene & nad2 gene, exon 1 & 2 and
            joining features
          Length = 4784

 Score =  307 bits (155), Expect = 2e-80
 Identities = 192/203 (94%), Gaps = 1/203 (0%)
 Strand = Plus / Plus

                                                                        
Query: 339  agcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagt 398
            |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 2755 agcggtttccccagagatctttatcattaatgcaacctccattttgctcattcatggagt 2814

                                                                        
Query: 399  tgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggct 458
            |||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||
Sbjct: 2815 tgtatttagtacctctaagaaatatgattatccgccgttagccagtaatgtgggttggct 2874

                                                                        
Query: 459  tggattacttagtgttgcgcgcctaggagggcagcgcgctt-gggatgcggaggagctat 517
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 2875 tggattacttagtgttgcgcgcctaggagggcagcgcgcttggggatgcagaggaactat 2934

                                   
Query: 518  tatcgcccagctccctaacctaa 540
            ||||||||||| ||||| |||||
Sbjct: 2935 tatcgcccagccccctaccctaa 2957

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  246 bits (124), Expect = 6e-62
 Identities = 127/128 (99%)
 Strand = Plus / Plus

                                                                            
Query: 418      aaagatgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcg 477
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13440888 aaagatgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcg 13440947

                                                                            
Query: 478      cgcctaggagggcagcgcgcttgggatgcggaggagctattatcgcccagctccctaacc 537
                ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 13440948 cgcctaggagggcagcgcgcttggggtgcggaggagctattatcgcccagctccctaacc 13441007

                        
Query: 538      taatgcgg 545
                ||||||||
Sbjct: 13441008 taatgcgg 13441015



 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                            
Query: 249      cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
                ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 20502559 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 20502618

                    
Query: 309      aact 312
                ||||
Sbjct: 20502619 aact 20502622



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                      
Query: 142      ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
                ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 20501567 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 20501620



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 142      ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
                ||||| |||||||||||   |||||||| ||||||||| |||||||| ||||||
Sbjct: 20572903 ataaaagaccaacgaaatgacgagtgagaaggataagggggagtagtaggagga 20572956

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  246 bits (124), Expect = 6e-62
 Identities = 127/128 (99%)
 Strand = Plus / Plus

                                                                            
Query: 418      aaagatgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcg 477
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13395162 aaagatgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcg 13395221

                                                                            
Query: 478      cgcctaggagggcagcgcgcttgggatgcggaggagctattatcgcccagctccctaacc 537
                ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 13395222 cgcctaggagggcagcgcgcttggggtgcggaggagctattatcgcccagctccctaacc 13395281

                        
Query: 538      taatgcgg 545
                ||||||||
Sbjct: 13395282 taatgcgg 13395289



 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                            
Query: 249      cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
                ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 20428773 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 20428832

                    
Query: 309      aact 312
                ||||
Sbjct: 20428833 aact 20428836



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                      
Query: 142      ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
                ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 20427781 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 20427834



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 142      ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
                ||||| |||||||||||   |||||||| ||||||||| |||||||| ||||||
Sbjct: 20499117 ataaaagaccaacgaaatgacgagtgagaaggataagggggagtagtaggagga 20499170

---

>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 154442

 Score =  246 bits (124), Expect = 6e-62
 Identities = 127/128 (99%)
 Strand = Plus / Minus

                                                                          
Query: 418    aaagatgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcg 477
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144351 aaagatgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcg 144292

                                                                          
Query: 478    cgcctaggagggcagcgcgcttgggatgcggaggagctattatcgcccagctccctaacc 537
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 144291 cgcctaggagggcagcgcgcttggggtgcggaggagctattatcgcccagctccctaacc 144232

                      
Query: 538    taatgcgg 545
              ||||||||
Sbjct: 144231 taatgcgg 144224

---

>emb|X99020.1|MYSCATP Secale cereale mitochondrial atpA & atp9 genes
          Length = 3091

 Score =  188 bits (95), Expect = 1e-44
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaagggtcttcccatctcttcttgttattgtctttgtccgagatgcccggttcaccaaat 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaagggtcttcccatctcttcttgttattgtctttgtccgagatgcccggttcaccaaat 565

                                              
Query: 62  gataattcaaatcgagattgtgtgaagtaaagatc 96
           |||||||||||||||||||||||||||||||||||
Sbjct: 566 gataattcaaatcgagattgtgtgaagtaaagatc 600

---

>emb|X80469.1|MTTDATPA9 T.durum mitochondria genes atpA and atp9
          Length = 3622

 Score =  180 bits (91), Expect = 3e-42
 Identities = 94/95 (98%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaagggtcttcccatctcttcttgttattgtctttgtccgagatgcccggttcaccaaat 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gaagggtcttcccatctcttcttgttattgtctttgtccgagatgcccggttcaccaaat 308

                                              
Query: 62  gataattcaaatcgagattgtgtgaagtaaagatc 96
           || ||||||||||||||||||||||||||||||||
Sbjct: 309 gagaattcaaatcgagattgtgtgaagtaaagatc 343

---

>gb|M68929.1|MPOMTCG Marchantia polymorpha mitochondrion, complete genome
          Length = 186609

 Score =  174 bits (88), Expect = 2e-40
 Identities = 124/136 (91%)
 Strand = Plus / Plus

                                                                        
Query: 339  agcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagt 398
            |||| ||| ||| ||||||||| |||||||||||||| |||||||||| ||| |||||||
Sbjct: 8902 agcgcttttcccggagatctttctcattaacgcaaccatcattttgcttatttatggagt 8961

                                                                        
Query: 399  tgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggct 458
            |||||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||
Sbjct: 8962 tgtatttagtacctctaaaaaatatgattatccaccgttagtgcgtaatgtgggttggct 9021

                            
Query: 459  tggattacttagtgtt 474
            ||| ||||||||||||
Sbjct: 9022 tggtttacttagtgtt 9037

---

>dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complete genome
          Length = 105340

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Plus

                                                                         
Query: 339   agcggtttccccagagatctttatcattaacgcaaccttcattttgctcattcatggagt 398
             |||| ||| ||||||||||||| | |||||||||||| |||||||||| ||| |||||||
Sbjct: 51575 agcgcttttcccagagatctttcttattaacgcaaccatcattttgcttatttatggagt 51634

                                                                         
Query: 399   tgtatttagtacctctaagaaagatgattatccaccgttagttagtaatgtgggttggct 458
             |||||||||||||||||| ||| ||||||||||||| |||||  |||||||  |||||||
Sbjct: 51635 tgtatttagtacctctaaaaaatatgattatccaccattagtgtgtaatgttagttggct 51694

                                             
Query: 459   tggattacttagtgttgcgcgcctaggagggc 490
             ||| ||||||||||||| ||||||||||||||
Sbjct: 51695 tggtttacttagtgttgtgcgcctaggagggc 51726

---

>emb|X80470.1|MTDATPA9 T.durum mitochondria atpA and atp9 mRNA
          Length = 2610

 Score =  172 bits (87), Expect = 8e-40
 Identities = 93/95 (97%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaagggtcttcccatctcttcttgttattgtctttgtccgagatgcccggttcaccaaat 61
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 188 gaagggtcttcccatctcttcttgttattgtctttgtccgagatgcctggttcaccaaat 247

                                              
Query: 62  gataattcaaatcgagattgtgtgaagtaaagatc 96
           || ||||||||||||||||||||||||||||||||
Sbjct: 248 gagaattcaaatcgagattgtgtgaagtaaagatc 282

---

>emb|X16049.1|MITATPAA Wheat mitochondrial atpA gene for F-1-ATPase alpha subunit
          Length = 2031

 Score =  159 bits (80), Expect = 1e-35
 Identities = 93/96 (96%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaagggtctt-cccatctcttcttgttattgtctttgtccgagatgcccggttcaccaaa 60
           |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 171 gaagggtctttcccatctcttcttgttattgtctttgtccgagatgcccgcttcaccaaa 230

                                               
Query: 61  tgataattcaaatcgagattgtgtgaagtaaagatc 96
           ||| ||||||||||||||||||||||||||||||||
Sbjct: 231 tgagaattcaaatcgagattgtgtgaagtaaagatc 266

---

>gb|AC149197.13| Medicago truncatula clone mth2-33p18, complete sequence
          Length = 115362

 Score =  107 bits (54), Expect = 4e-20
 Identities = 70/74 (94%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                         
Query: 442   agtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc-ttg 500
             ||||||||||||||||| |||||||||| |||| |||||||||||||||||||||| |||
Sbjct: 63883 agtaatgtgggttggctcggattacttattgtttcgcgcctaggagggcagcgcgctttg 63824

                           
Query: 501   ggatgcggaggagc 514
             ||||||||||||||
Sbjct: 63823 ggatgcggaggagc 63810



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 524   ccagctccctaacctaatgcgg 545
             ||||||||||||||||||||||
Sbjct: 63768 ccagctccctaacctaatgcgg 63747

---

>gb|AC148395.12| Medicago truncatula clone mth2-28d22, complete sequence
          Length = 116174

 Score =  107 bits (54), Expect = 4e-20
 Identities = 70/74 (94%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                         
Query: 442   agtaatgtgggttggcttggattacttagtgttgcgcgcctaggagggcagcgcgc-ttg 500
             ||||||||||||||||| |||||||||| |||| |||||||||||||||||||||| |||
Sbjct: 52292 agtaatgtgggttggctcggattacttattgtttcgcgcctaggagggcagcgcgctttg 52351

                           
Query: 501   ggatgcggaggagc 514
             ||||||||||||||
Sbjct: 52352 ggatgcggaggagc 52365



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 524   ccagctccctaacctaatgcgg 545
             ||||||||||||||||||||||
Sbjct: 52407 ccagctccctaacctaatgcgg 52428

---

>gb|M57903.1|RICMTCOXI Oryza sativa (japonica cultivar-group) tRNA-Ser (trnS), gene,
            complete sequence; cytochrome oxidase subunit I (coxI)
            gene, partial cds; and unknown genes; mitochondrial
          Length = 2280

 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                        
Query: 249  cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
            ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 1966 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 2025

                
Query: 309  aact 312
            ||||
Sbjct: 2026 aact 2029



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 142  ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
            ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 973  ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 1026

---

>emb|X15990.1|MIOSCOXI Rice mitochondrial coxI gene for cytochrome oxidase subunit I
          Length = 1955

 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                       
Query: 249 cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
           ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 115 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 174

               
Query: 309 aact 312
           ||||
Sbjct: 175 aact 178

---

>dbj|AK064537.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-H11, full
           insert sequence
          Length = 1621

 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                       
Query: 249 cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
           ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 754 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 813

               
Query: 309 aact 312
           ||||
Sbjct: 814 aact 817

---

>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 143618

 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                         
Query: 249   cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
             ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 90674 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 90615

                 
Query: 309   aact 312
             ||||
Sbjct: 90614 aact 90611



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 142   ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
             ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 91666 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 91613



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 142   ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
             ||||| |||||||||||   |||||||| ||||||||| |||||||| ||||||
Sbjct: 20330 ataaaagaccaacgaaatgacgagtgagaaggataagggggagtagtaggagga 20277

---

>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 185820

 Score =  103 bits (52), Expect = 6e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                        
Query: 249  cttttgaattaactctgcgatttggaagacggaggaaatgaaagtagaagaagttatcga 308
            ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 9142 cttttgaattaactctgcgattttgaagacggaggaaatgaaagctgaagaagttatcga 9083

                
Query: 309  aact 312
            ||||
Sbjct: 9082 aact 9079



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 142   ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
             ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 10134 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 10081

---

>emb|AJ409125.1|GGN409125 Gnetum gnemon mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 1189

 Score =  103 bits (52), Expect = 6e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                       
Query: 424 gattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgccta 483
           ||||||||||||||||  |||||||||||||||||||||||||| |||| |  |||||||
Sbjct: 8   gattatccaccgttagcaagtaatgtgggttggcttggattactcagtgctttgcgccta 67

                           
Query: 484 ggagggcagcgcgctt 499
           ||||||||||||||||
Sbjct: 68  ggagggcagcgcgctt 83

---

>emb|AJ409120.1|LAN409120 Lycopodium annotinum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-3
          Length = 3456

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           |||||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccgttagtacgtaatgtgggttggcttggtttacttagtgttgtgcgcc 65

                   
Query: 482 taggaggg 489
           ||| ||||
Sbjct: 66  tagaaggg 73

---

>emb|AJ299545.1|CRI299545 Cinclidotus riparius mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2214

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299544.1|TLA299544 Tortula latifolia mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2206

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299543.1|PTR299543 Pottia truncata mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2205

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299536.1|DPE299536 Dichodontium pellucidum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2214

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299531.1|BAP299531 Buxbaumia aphylla mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2188

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtatgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299529.1|TPE299529 Tetraphis pellucida mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2245

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299524.1|SFA299524 Sphagnum fallax mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2256

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           |||||||||||||||||||  |||||||| ||||||| || ||||||||||||| |||||
Sbjct: 6   atgattatccaccgttagtgcgtaatgtgagttggctcggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299528.1|PUR299528 Pogonatum urnigerum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2227

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                   
Query: 482 taggaggg 489
           ||||||||
Sbjct: 66  taggaggg 73

---

>emb|AJ299527.1|AUN299527 Atrichum undulatum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2227

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                   
Query: 482 taggaggg 489
           ||||||||
Sbjct: 66  taggaggg 73

---

>emb|AJ299561.1|SSE299561 Herzogiella seligeri mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2218

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299565.1|IAL299565 Isothecium alopecurum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2219

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299564.1|LPO299564 Leskea polycarpa mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2215

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299563.1|SSC299563 Scorpidium scorpioides mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2217

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299562.1|HOC299562 Hygrohypnum ochraceum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2218

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299560.1|TNI299560 Tomentypnum nitens mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2218

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299558.1|FAN299558 Fontinalis antipyretica mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2219

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299555.1|RPU299555 Rhacocarpus purpurascens mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2220

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299553.1|UCR299553 Ulota crispa mitochondrial partial nad2 gene for NADH dehydrogenase
           subunit 2, exons 1-2
          Length = 2220

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299552.1|MHO299552 Mnium hornum mitochondrial partial nad2 gene for NADH dehydrogenase
           subunit 2, exons 1-2
          Length = 2214

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299550.1|PNU299550 Pohlia nutans mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2218

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299548.1|SFA299548 Plagiopus oederi mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2214

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299547.1|BHA299547 Bartramia halleriana mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2228

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299542.1|RLA299542 Racomitrium lanuginosum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2209

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299540.1|LGL299540 Leucobryum glaucum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2225

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299539.1|DCY299539 Ditrichum cylindricum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2213

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299538.1|CPU299538 Ceratodon purpureus mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2201

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299537.1|OMO299537 Orthodicranum montanum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2219

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299535.1|PPA299535 Physcomitrella patens mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2212

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299534.1|FHY299534 Funaria hygrometrica mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2211

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299533.1|EST299533 Encalypta streptocarpa mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2216

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299532.1|TBA299532 Timmia bavarica mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2214

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299530.1|DSE299530 Diphyscium sessile mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2189

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           ||| |||||
Sbjct: 66  tagcagggc 74

---

>emb|AJ299526.1|ANI299526 Andreaea nivalis mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2201

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| || ||  |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccacccttggtgtgtaatgtgagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299525.1|TLE299525 Takakia lepidozioides mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2252

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| || ||  |||||||| |||||||||| | |||||||||||||||||
Sbjct: 6   atgattatccaccattggtgcgtaatgtgagttggcttggttcacttagtgttgcgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ409122.1|FPU409122 Fossombronia pusilla mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2632

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||||  ||||||||||||||||||| ||||||||||||
Sbjct: 6   atgattatccaccgttagtgcgtaatgtgggttggcttggtttacttagtgtt 58

---

>emb|AJ409118.1|PLA409118 Phaeoceros laevis mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-3
          Length = 5054

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||||| ||||||||||||||||||| |||| |||||||
Sbjct: 6   atgattatccaccgttagtttgtaatgtgggttggcttggtttacctagtgtt 58

---

>emb|AJ344062.1|RNA344062 Ricciocarpos natans mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2655

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||||  ||||||||||||||||||| ||||||||||||
Sbjct: 6   atgattatccaccgttagtgcgtaatgtgggttggcttggtttacttagtgtt 58

---

>emb|AJ344061.1|LCR344061 Lunularia cruciata mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2667

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||||  ||||||||||||||||||| ||||||||||||
Sbjct: 6   atgattatccaccgttagtgcgtaatgtgggttggcttggtttacttagtgtt 58

---

>emb|AJ344060.1|CCO344060 Corsinia coriandrina mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2672

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||||  ||||||||||||||||||| ||||||||||||
Sbjct: 6   atgattatccaccgttagtgcgtaatgtgggttggcttggtttacttagtgtt 58

---

>emb|AJ344059.1|BRO344059 Bucegia romanica mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2664

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||||  ||||||||||||||||||| ||||||||||||
Sbjct: 6   atgattatccaccgttagtgcgtaatgtgggttggcttggtttacttagtgtt 58

---

>emb|AJ344064.1|PAS344064 Plagiochila asplenioides mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2686

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                              
Query: 424 gattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||  ||||||||||||||||||| ||||||||||||
Sbjct: 8   gattatccaccgttagtgcgtaatgtgggttggcttggtttacttagtgtt 58

---

>emb|AJ299559.1|TAL299559 Thamnobryum alopecurum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2221

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||| ||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttactcagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299557.1|HTR299557 Homalia trichomanoides mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2222

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| |||||||||| || |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgctgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299556.1|PGR299556 Pterogonium gracile mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2217

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||| ||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttactcagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299554.1|HCI299554 Hedwigia ciliata mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2221

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||| | |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgtcgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299551.1|OLI299551 Orthodontium lineare mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2218

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||| ||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttactcagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299549.1|AAN299549 Aulacomnium androgynum mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2231

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||| | |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgtcgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299546.1|SPE299546 Schistostega pennata mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2214

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||| | |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgtcgtgcgcc 65

                    
Query: 482 taggagggc 490
           |||||||||
Sbjct: 66  taggagggc 74

---

>emb|AJ299541.1|FCR299541 Fissidens cristatus mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2216

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgcgcgcc 481
           ||||||||||||| |||||  |||||||  |||||||||| ||||||||||||| |||||
Sbjct: 6   atgattatccaccattagtgtgtaatgttagttggcttggtttacttagtgttgtgcgcc 65

                    
Query: 482 taggagggc 490
           | |||||||
Sbjct: 66  tgggagggc 74

---

>emb|AJ409124.1|SDO409124 Sphaerocarpos donnelli mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2677

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           ||||||||||||| |||||  ||||||||||||||||||| ||||||||||||
Sbjct: 6   atgattatccacccttagtgcgtaatgtgggttggcttggtttacttagtgtt 58

---

>emb|AJ409123.1|HMN409123 Haplomitrium mnioides mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2583

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||||  |||||| |||||||||||| ||||||||||||
Sbjct: 6   atgattatccaccgttagtgcgtaatgcgggttggcttggtttacttagtgtt 58

---

>emb|AJ409126.1|GBI409126 Ginkgo biloba mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 1614

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 417 gaaagatgattatccaccgttagttagtaatgtgggttggcttggattacttagtgttgc 476
           |||| ||||||||||||| ||||| |||||||||||||||||  ||| ||  ||||||| 
Sbjct: 1   gaaatatgattatccaccattagtaagtaatgtgggttggctcagatcacccagtgttgt 60

                                  
Query: 477 gcgcctaggagggcagcgcgctt 499
           || | ||||||||||||| ||||
Sbjct: 61  gcacttaggagggcagcgtgctt 83

---

>emb|AJ409117.1|AAG409117 Anthoceros agrestis mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-3
          Length = 4836

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||||||  ||||||||||||||||||| | || |||||||
Sbjct: 6   atgattatccaccgttagtatgtaatgtgggttggcttggttcacctagtgtt 58

---

>gb|U93501.1|HVU93501 Hordeum vulgare hypothetical protein 256 (ELF) gene, complete cds,
           and cytochrome C oxidase I (coxI) gene, partial cds,
           mitochondrial genes encoding mitochondrial proteins
          Length = 1071

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 186 agtcggaggatctgagaagggaattagagaaaaaagagc 224
           ||||||||||||| |||||||||||||| ||||||||||
Sbjct: 829 agtcggaggatcttagaagggaattagaaaaaaaagagc 867

---

>gb|U93499.1|ASU93499 Aegilops speltoides var. speltoides hypothetical protein 256 gene,
           complete cds, and cytochrome C oxidase I (coxI) gene,
           partial cds, mitochondrial genes encoding mitochondrial
           proteins
          Length = 1065

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 186 agtcggaggatctgagaagggaattagagaaaaaagagc 224
           ||||||||||||| |||||||||||||| ||||||||||
Sbjct: 819 agtcggaggatcttagaagggaattagaaaaaaaagagc 857

---

>emb|AJ409127.1|TBA409127 Taxus baccata mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exon 1
          Length = 159

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 424 gattatccaccgttagttagtaatgtgggttggcttggattac 466
           |||||||| |||||||  |||||||||||||||||||||||||
Sbjct: 8   gattatccgccgttagcaagtaatgtgggttggcttggattac 50

---

>dbj|D13109.1|RICMT13 Oryza sativa (japonica cultivar-group) mitochondrial gene for rpoB
           protein, partial cds
          Length = 1639

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 142 ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
           ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 824 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 771

---

>dbj|D78336.1| Oryza sativa (japonica cultivar-group) mitochondrial DNA for
            ribosomal protein L2, ribosomal protein S19, complete cds
          Length = 4565

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 142  ataaatgaccaacgaaacttcgagtgagtaggataaggaggagtagtcggagga 195
            ||||| ||||||||||||  |||||||| ||||||||| |||||||| ||||||
Sbjct: 1019 ataaaagaccaacgaaacgacgagtgagaaggataagggggagtagtaggagga 1072

---

>emb|AJ344063.1|PEP344063 Pellia epiphylla mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-2
          Length = 2249

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 422 atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
           |||||||||||||||| ||  ||||||||||| ||| ||| ||||||||||||
Sbjct: 6   atgattatccaccgttggtgcgtaatgtgggtcggcctggtttacttagtgtt 58

---

>emb|X56186.1|MITACOX1 Triticum timopheevii x Triticum aestivum mitochondrial coxI gene
           for cytochrome-c oxidase subunit I and ORF256
          Length = 3059

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 953 agtcggaggatcttagaagggaattagaaaaaaaa 987

---

>gb|L10365.1|WHTMTUNPRB Triticum aestivum x Triticum timopheevi unknown mRNA; mitochondrial
           gene for mitochondrial product
          Length = 895

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 811 agtcggaggatcttagaagggaattagaaaaaaaa 845

---

>gb|L10364.1|WHTMTUNPRA Triticum aestivum x Triticum timopheevi unknown mRNA; mitochondrial
           gene for mitochondrial product
          Length = 895

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 811 agtcggaggatcttagaagggaattagaaaaaaaa 845

---

>gb|L10332.1|WHTMTUNNN Triticum timopheevii mitochondrion open reading frame (ORF256),
           complete cds
          Length = 936

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 852 agtcggaggatcttagaagggaattagaaaaaaaa 886

---

>gb|U93504.1|TMU93504 Triticum monococcum hypothetical protein 256 (ELF) gene, complete
           cds, and cytochrome C oxidase I (coxI) gene, partial
           cds, mitochondrial genes encoding mitochondrial proteins
          Length = 1042

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 829 agtcggaggatcttagaagggaattagaaaaaaaa 863

---

>gb|U93502.1|SCU93502 Secale cereale hypothetical protein 256 (ELF) gene, complete cds,
           and cytochrome C oxidase I (coxI) gene, partial cds,
           mitochondrial genes encoding mitochondrial proteins
          Length = 1042

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 830 agtcggaggatcttagaagggaattagaaaaaaaa 864

---

>gb|U93498.1|ASU93498 Aegilops speltoides var. speltoides hypothetical protein 256 (ELF)
           gene, complete cds, and cytochrome C oxidase I (coxI)
           gene, partial cds, mitochondrial genes encoding
           mitochondrial proteins
          Length = 1066

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 819 agtcggaggatcttagaagggaattagaaaaaaaa 853

---

>gb|U93495.1|ABU93495 Aegilops bicornis hypothetical protein 256 (ELF) gene, complete
           cds, and cytochrome C oxidase I (coxI) gene, partial
           cds, mitochondrial genes encoding mitochondrial proteins
          Length = 1066

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 819 agtcggaggatcttagaagggaattagaaaaaaaa 853

---

>gb|U46764.1|ACU46764 Aegilops columnaris cytochrome c oxidase subunit I (cox1) gene,
           mitochondrial gene encoding mitochondrial protein,
           complete cds
          Length = 2048

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 70  agtcggaggatcttagaagggaattagaaaaaaaa 104

---

>emb|AJ409119.1|IDU409119 Isoetes durieui mitochondrial partial nad2 gene for NADH
           dehydrogenase subunit 2, exons 1-5
          Length = 2890

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 424 gattatccaccgttagttagtaatgtgggttggcttggattacttagtgt 473
           ||||||||| |||| ||  |||||||||||||||| || |||||||||||
Sbjct: 8   gattatccatcgttggtacgtaatgtgggttggctcggtttacttagtgt 57

---

>gb|U93497.1|ASU93497 Aegilops sharonensis hypothetical protein 256 (ELF) gene, complete
           cds, and cytochrome C oxidase I (coxI) gene, partial
           cds, mitochondrial genes encoding mitochondrial proteins
          Length = 1066

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 186 agtcggaggatctgagaagggaattagagaaaa 218
           ||||||||||||| |||||||||||||| ||||
Sbjct: 819 agtcggaggatcttagaagggaattagaaaaaa 851

---

>gb|AY548063.1| Myriocolea irrorata NADH dehydrogenase subunit 4 (nad4) gene,
           partial cds; nad4-nad2 intergenic spacer, complete
           sequence; and NADH dehydrogenase subunit 2 (nad2) gene,
           partial cds; mitochondrial
          Length = 183

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 339 agcggtttccccagagatctttatcattaacgcaaccttcatt 381
           |||| ||| ||| ||||||||| |||||||||||||| |||||
Sbjct: 141 agcgcttttcccggagatctttctcattaacgcaaccatcatt 183

---

>gb|AY548061.1| Cyclolejeunea peruviana NADH dehydrogenase subunit 4 (nad4) gene,
           partial cds; nad4-nad2 intergenic spacer, complete
           sequence; and NADH dehydrogenase subunit 2 (nad2) gene,
           partial cds; mitochondrial
          Length = 183

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 339 agcggtttccccagagatctttatcattaacgcaaccttcatt 381
           |||| ||| ||| ||||||||| |||||||||||||| |||||
Sbjct: 141 agcgcttttcccggagatctttctcattaacgcaaccatcatt 183

---

>gb|AY548060.1| Ceratolejeunea filaria NADH dehydrogenase subunit 4 (nad4) gene,
           partial cds; nad4-nad2 intergenic spacer, complete
           sequence; and NADH dehydrogenase subunit 2 (nad2) gene,
           partial cds; mitochondrial
          Length = 183

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 339 agcggtttccccagagatctttatcattaacgcaaccttcatt 381
           |||| ||| ||| ||||||||| |||||||||||||| |||||
Sbjct: 141 agcgcttttcccggagatctttctcattaacgcaaccatcatt 183

---

>gb|U93503.1|TBU93503 Triticum boeoticum subsp. boeoticum hypothetical protein 256 (ELF)
           gene, complete cds, and cytochrome C oxidase I (coxI)
           gene, partial cds, mitochondrial genes encoding
           mitochondrial proteins
          Length = 1041

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| ||||||||| |||| ||||||
Sbjct: 829 agtcggaggatcttagaagggaactagaaaaaaaa 863

---

>gb|U93500.1|PTU93500 Aegilops tauschii hypothetical protein 256 (ELF) gene, complete
           cds, and cytochrome C oxidase I (coxI) gene, partial
           cds, mitochondrial genes encoding mitochondrial proteins
          Length = 1072

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| ||||||||||| || ||||||
Sbjct: 829 agtcggaggatcttagaagggaattcgaaaaaaaa 863

---

>gb|U93496.1|ASU93496 Aegilops searsii hypothetical protein 256 (ELF) gene, complete cds,
           and cytochrome C oxidase I (coxI) gene, partial cds,
           mitochondrial genes encoding mitochondrial proteins
          Length = 1066

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 186 agtcggaggatctgagaagggaattagagaaaaaa 220
           ||||||||||||| ||||||||||| || ||||||
Sbjct: 819 agtcggaggatcttagaagggaattcgaaaaaaaa 853

---

>dbj|D13111.1|RICMT15 Oryza sativa (japonica cultivar-group) mitochondrial rpoB
           pseudogene
          Length = 835

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 142 ataaatgaccaacgaaacttcgagtgagtaggataa-ggaggagtagtcggagga 195
           ||||| ||||||||||||  |||||||| ||||||| || |||||||| ||||||
Sbjct: 443 ataaaagaccaacgaaacgacgagtgagaaggataaggggggagtagtaggagga 389

---

>gb|AC090061.15| Homo sapiens 12 BAC RP11-637A17 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 23401

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 198  tgagaagggaattagagaaaaaagagcagc 227
            |||||||||||| |||||||||| ||||||
Sbjct: 8412 tgagaagggaatgagagaaaaaacagcagc 8383

---

>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 58      aaatgataattcaaatcgagat 79
               ||||||||||||||||||||||
Sbjct: 2118625 aaatgataattcaaatcgagat 2118604

---

>gb|AC008651.7|AC008651 Homo sapiens chromosome 5 clone CTB-187A7, complete sequence
          Length = 147098

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 198    tgagaagggaattagagaaaaaagagcagc 227
              |||||||||||| |||||||||| ||||||
Sbjct: 116213 tgagaagggaatgagagaaaaaacagcagc 116184

---

>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete
              sequence
          Length = 123337

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 437    tagttagtaatgtgggttggcttgga 462
              |||||| |||||||||||||||||||
Sbjct: 101021 tagttactaatgtgggttggcttgga 101046



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 405    tagtacctctaagaaagatgattatccac 433
              |||| |||||||||| |||||||||||||
Sbjct: 100843 tagtgcctctaagaaggatgattatccac 100871



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 405    tagtacctctaagaaagatgattatccac 433
              |||| |||||||||| |||||||||||||
Sbjct: 100655 tagtgcctctaagaaggatgattatccac 100683

---

>emb|AL732337.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0821G03, complete
             sequence
          Length = 75285

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 437   tagttagtaatgtgggttggcttgga 462
             |||||| |||||||||||||||||||
Sbjct: 22497 tagttactaatgtgggttggcttgga 22522



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 405   tagtacctctaagaaagatgattatccac 433
             |||| |||||||||| |||||||||||||
Sbjct: 22319 tagtgcctctaagaaggatgattatccac 22347



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 405   tagtacctctaagaaagatgattatccac 433
             |||| |||||||||| |||||||||||||
Sbjct: 22131 tagtgcctctaagaaggatgattatccac 22159

---

>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05,
              complete sequence
          Length = 178013

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 486    agggcagcgcgcttgggatgcggag 510
              ||||||||||||| |||||||||||
Sbjct: 136055 agggcagcgcgctggggatgcggag 136031

---

>gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, complete sequence
          Length = 190776

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   gaattagagaaaaaagagcag 226
             |||||||||||||||||||||
Sbjct: 97329 gaattagagaaaaaagagcag 97349

---

>gb|AC162380.4| Pan troglodytes BAC clone CH251-629G18 from chromosome 7, complete
              sequence
          Length = 210978

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 206    gaattagagaaaaaagagcag 226
              |||||||||||||||||||||
Sbjct: 173976 gaattagagaaaaaagagcag 173956

---

>gb|AC147087.3| Pan troglodytes BAC clone RP43-59E13 from 7, complete sequence
          Length = 130280

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 206    gaattagagaaaaaagagcag 226
              |||||||||||||||||||||
Sbjct: 110045 gaattagagaaaaaagagcag 110065

---

>gb|AY267353.1| Chara vulgaris mitochondrion, complete genome
          Length = 67737

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 422   atgattatccaccgttagttagtaatgtgggttggcttggattacttagtgtt 474
             ||||||||||||| |||||  |||||||||| ||| | || ||||| ||||||
Sbjct: 36628 atgattatccaccattagtgcgtaatgtgggatggttgggtttactgagtgtt 36680

---

>emb|AL355611.11| Human DNA sequence from clone RP11-430K22 on chromosome 13 Contains a 60S
              ribosomal protein L12 (RPL12) pseudogene and a pseudogene
              similar to part of ribosomal protein S3A (RPS3A)(FTE1),
              complete sequence
          Length = 176939

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    tttttcttcttactaactttg 121
              |||||||||||||||||||||
Sbjct: 145836 tttttcttcttactaactttg 145816

---

>gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence
          Length = 171612

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 206    gaattagagaaaaaagagcag 226
              |||||||||||||||||||||
Sbjct: 157595 gaattagagaaaaaagagcag 157575

---

>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11,
              complete sequence
          Length = 134231

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 405    tagtacctctaagaaagatgattatccac 433
              |||| |||||||||| |||||||||||||
Sbjct: 127850 tagtgcctctaagaaggatgattatccac 127878

---

>gb|AC183776.2| Pan troglodytes BAC clone CH251-246H3 from chromosome 7, complete
              sequence
          Length = 160056

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 206    gaattagagaaaaaagagcag 226
              |||||||||||||||||||||
Sbjct: 121078 gaattagagaaaaaagagcag 121098

---

>gb|AC097626.9| Homo sapiens X BAC RP11-527B14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115435

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   agaagggaattagagaaaaaa 220
             |||||||||||||||||||||
Sbjct: 15163 agaagggaattagagaaaaaa 15143

---

>gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H23, complete sequence
          Length = 159611

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 275    agacggaggaaatgaaagtagaaga 299
              |||||||| ||||||||||||||||
Sbjct: 119548 agacggagcaaatgaaagtagaaga 119572

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 405      tagtacctctaagaaagatgattatccac 433
                |||| |||||||||| |||||||||||||
Sbjct: 32984988 tagtgcctctaagaaggatgattatccac 32985016

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 486      agggcagcgcgcttgggatgcggag 510
                ||||||||||||| |||||||||||
Sbjct: 18662940 agggcagcgcgctggggatgcggag 18662916

---

>gb|AC002064.1|HSAC002064 Human BAC clone RG016J04 from 7q21, complete sequence
          Length = 156214

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 206   gaattagagaaaaaagagcag 226
             |||||||||||||||||||||
Sbjct: 98587 gaattagagaaaaaagagcag 98567

---

>emb|CT025553.4| Mouse DNA sequence from clone RP23-470O20 on chromosome 14, complete
             sequence
          Length = 173093

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   gaggaaatgaaagtagaaga 299
             ||||||||||||||||||||
Sbjct: 48539 gaggaaatgaaagtagaaga 48558

---

>gb|U28929.1| Caenorhabditis elegans cosmid F09C12, complete sequence
          Length = 25662

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 205   ggaattagagaaaaaagagcagca 228
             ||||||||||||||||||| ||||
Sbjct: 19988 ggaattagagaaaaaagaggagca 19965

---

>emb|AL713873.11| Human DNA sequence from clone RP11-10L1 on chromosome 1 Contains the 5'
             end of a novel gene, complete sequence
          Length = 101283

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    cccatctcttcttgttattgtctt 35
             |||||||| |||||||||||||||
Sbjct: 18320 cccatctcatcttgttattgtctt 18297

---

>emb|AL162413.26| Human DNA sequence from clone RP11-109M17 on chromosome 9 Containe the
             5' end of a pseudogene similar to part of A kinase (PRKA)
             anchor protein 8 (AKAP8), complete sequence
          Length = 114302

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   ctaggcttttgaattaactc 263
             ||||||||||||||||||||
Sbjct: 77197 ctaggcttttgaattaactc 77216

---

>emb|AL161912.15| Human DNA sequence from clone RP11-403N16 on chromosome 9 Contains a
            novel pseudogene and a novel gene, complete sequence
          Length = 102624

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  gaattagagaaaaaagagca 225
            ||||||||||||||||||||
Sbjct: 7136 gaattagagaaaaaagagca 7117

---

>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete
             sequence
          Length = 215502

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    accaaatgataattcaaatc 74
             ||||||||||||||||||||
Sbjct: 37604 accaaatgataattcaaatc 37585

---

>gb|AC092979.3| Homo sapiens 3 BAC RP11-680B3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 123274

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    agtaatgtgggttggcttgg 461
              ||||||||||||||||||||
Sbjct: 108563 agtaatgtgggttggcttgg 108544

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 212      gagaaaaaagagcagcagct 231
                ||||||||||||||||||||
Sbjct: 24437792 gagaaaaaagagcagcagct 24437811

---

>gb|AC008992.7|AC008992 Homo sapiens chromosome 19 clone LLNLF-95F7, complete sequence
          Length = 45855

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 190  ggaggatctgagaagggaat 209
            ||||||||||||||||||||
Sbjct: 3156 ggaggatctgagaagggaat 3137

---

>gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166966

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    gagaagggaattagagaaaa 218
              ||||||||||||||||||||
Sbjct: 156906 gagaagggaattagagaaaa 156925

---

>gb|AE000789.1| Borrelia burgdorferi B31 plasmid lp28-4, complete sequence
          Length = 27323

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aaatgaaagtagaagaagtt 303
             ||||||||||||||||||||
Sbjct: 12117 aaatgaaagtagaagaagtt 12136

---

>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1142B04
          Length = 161964

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gagaaaaaagagcagcagct 231
             ||||||||||||||||||||
Sbjct: 53508 gagaaaaaagagcagcagct 53527

---

>gb|AC004823.1|AC004823 Homo sapiens PAC clone RP1-172A13 from Xq23, complete sequence
          Length = 115973

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   agtacctctaagaaagatga 425
             ||||||||||||||||||||
Sbjct: 49036 agtacctctaagaaagatga 49055

---

>gb|AC007796.1|AC007796 Homo sapiens chromosome 19, cosmid F5119, complete sequence
          Length = 36347

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ggaggatctgagaagggaat 209
             ||||||||||||||||||||
Sbjct: 33523 ggaggatctgagaagggaat 33504

---

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 290     aagtagaagaagttatcgaaactc 313
               |||||||||||||||| |||||||
Sbjct: 1447811 aagtagaagaagttatggaaactc 1447788

---

>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete
             sequence
          Length = 196552

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    accaaatgataattcaaatc 74
             ||||||||||||||||||||
Sbjct: 79626 accaaatgataattcaaatc 79645

---

>emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on chromosome 2, complete
              sequence
          Length = 230213

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 371    caaccttcattttgctcatt 390
              ||||||||||||||||||||
Sbjct: 217922 caaccttcattttgctcatt 217941


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,829,093
Number of Sequences: 3902068
Number of extensions: 4829093
Number of successful extensions: 105754
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105039
Number of HSP's gapped (non-prelim): 688
length of query: 545
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 522
effective length of database: 17,143,297,704
effective search space: 8948801401488
effective search space used: 8948801401488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---