Clone Name | bah63m05 |
---|---|
Clone Library Name | barley_pub |
>gb|DQ409174.1| Bambusa ventricosa putative chitin-inducible gibberellin-responsive protein mRNA, complete cds Length = 2102 Score = 416 bits (210), Expect = e-113 Identities = 435/510 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||| |||||||||||||||||||||||| |||||||| |||| |||||| |||||||| Sbjct: 987 cccttcttcaagttcggctacatgtcggcgaacggcgcgatcgtggaggctgtcaaggga 1046 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||| ||| ||||||| ||||||||||||| ||| Sbjct: 1047 gaagacaggattcatatcatcgacttccacatctctcaagggactcagtggatctctctc 1106 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 |||||||||||||| |||||||| || ||||| || || ||||||||||| ||||||||| Sbjct: 1107 ctccaggcccttgcagccaggcctggtggaccaccaactgtgaggatcacaggcattgat 1166 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 || ||||| ||||| |||||||||||||||||||| || | ||||||||||| ||||| Sbjct: 1167 gattcggtatcagcttacgcgcgaggcggcgggctagagttggttgggaggaggctgtca 1226 Query: 242 cacatcgccggcctctgcaaggttccctttgagttccgctcggtcgccatggccggcgag 301 |||||||| ||||| |||||||| || ||||| |||| |||| || || | ||| Sbjct: 1227 cacatcgctggcctgtgcaaggtgccttttgaattccatgcggttgctatctctggcagc 1286 Query: 302 gaggtggaggaggggcacctcggggtggtccccggggaggcactggcggtgaacttcacc 361 |||||||| ||||| ||||| || || |||| ||||| || | ||||||||||||||| Sbjct: 1287 gaggtggaagagggacaccttggagtcatccctggggaagctgtcgcggtgaacttcacc 1346 Query: 362 ctggagctgcaccacatcccggacgagacggtgagcacggcgaaccaccgggaccggatc 421 ||||||||||||||||| || || ||||| |||||||||||||||||||| ||||||||| Sbjct: 1347 ctggagctgcaccacattccagatgagaccgtgagcacggcgaaccaccgcgaccggatc 1406 Query: 422 ctgcggctggtgaaggggctgaggcccaaggtgctgaccctggtggagcaggagtccaac 481 ||| ||||||||||||| || ||| |||||| | ||||| |||||||||||||||||| Sbjct: 1407 ctgaggctggtgaagggcatgtcgccgaaggtggtcaccctcgtggagcaggagtccaac 1466 Query: 482 accaacacggccccgttcccgcagaggttc 511 || ||||||||||||||| |||||||||| Sbjct: 1467 acgaacacggccccgttcgtgcagaggttc 1496
>ref|XM_478905.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2224 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 1086 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 1145 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 1146 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 1205 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 1206 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 1265 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||||| || || || || ||||| |||||| Sbjct: 1266 gactcagtgtcagcttacgcacgaggcggcgggctagagctggtcggaaggaggctgtcg 1325 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 1326 cacatcgccagcctgtgcaaggtgccctttgaattcc 1362 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 1414 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 1473 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 1474 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagcctgtcgccga 1533 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 1534 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 1593 Query: 510 tc 511 || Sbjct: 1594 tc 1595
>ref|XM_506430.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1127_E01.113 mRNA Length = 2234 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 1086 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 1145 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 1146 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 1205 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 1206 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 1265 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||||| || || || || ||||| |||||| Sbjct: 1266 gactcagtgtcagcttacgcacgaggcggcgggctagagctggtcggaaggaggctgtcg 1325 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 1326 cacatcgccagcctgtgcaaggtgccctttgaattcc 1362 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 1414 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 1473 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 1474 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagcctgtcgccga 1533 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 1534 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 1593 Query: 510 tc 511 || Sbjct: 1594 tc 1595
>dbj|AK061928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C06, full insert sequence Length = 1343 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 172 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 231 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 232 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 291 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 292 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 351 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||||| || || || || ||||| |||||| Sbjct: 352 gactcagtgtcagcttacgcacgaggcggcgggctagagctggtcggaaggaggctgtcg 411 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 412 cacatcgccagcctgtgcaaggtgccctttgaattcc 448 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 500 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 559 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 560 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagtctgtcgccga 619 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 620 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 679 Query: 510 tc 511 || Sbjct: 680 tc 681
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 23599321 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 23599380 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 23599381 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 23599440 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 23599441 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 23599500 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||||| || || || || ||||| |||||| Sbjct: 23599501 gactcagtgtcagcttacgcacgaggcggcgggctagagctggtcggaaggaggctgtcg 23599560 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 23599561 cacatcgccagcctgtgcaaggtgccctttgaattcc 23599597 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 23599649 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 23599708 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 23599709 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagcctgtcgccga 23599768 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 23599769 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 23599828 Query: 510 tc 511 || Sbjct: 23599829 tc 23599830 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 25415997 cggcgaggaggtggaggagg 25415978
>gb|AY062210.1| Oryza sativa chitin-inducible gibberellin-responsive protein (GIGR2) mRNA, complete cds Length = 2157 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 1075 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 1134 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 1135 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 1194 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 1195 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 1254 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||||| || || || || ||||| |||||| Sbjct: 1255 gactcagtgtcagcttacgcacgaggcggcgggctagagctggtcggaaggaggctgtcg 1314 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 1315 cacatcgccagcctgtgcaaggtgccctttgaattcc 1351 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 1403 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 1462 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 1463 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagcctgtcgccga 1522 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 1523 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 1582 Query: 510 tc 511 || Sbjct: 1583 tc 1584
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 51762 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 51821 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 51822 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 51881 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 51882 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 51941 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||||| || || || || ||||| |||||| Sbjct: 51942 gactcagtgtcagcttacgcacgaggcggcgggctagagctggtcggaaggaggctgtcg 52001 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 52002 cacatcgccagcctgtgcaaggtgccctttgaattcc 52038 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 52090 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 52149 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 52150 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagcctgtcgccga 52209 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 52210 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 52269 Query: 510 tc 511 || Sbjct: 52270 tc 52271
>dbj|AK098890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M01, full insert sequence Length = 2224 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 1086 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 1145 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 1146 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 1205 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 1206 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 1265 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||||| || || || || ||||| |||||| Sbjct: 1266 gactcagtgtcagcttacgcacgaggcggcgggctagagctggtcggaaggaggctgtcg 1325 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 1326 cacatcgccagcctgtgcaaggtgccctttgaattcc 1362 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 1414 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 1473 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 1474 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagcctgtcgccga 1533 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 1534 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 1593 Query: 510 tc 511 || Sbjct: 1594 tc 1595
>dbj|AK073470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I02, full insert sequence Length = 2234 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 1086 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 1145 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 1146 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 1205 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 1206 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 1265 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||||| || || || || ||||| |||||| Sbjct: 1266 gactcagtgtcagcttacgcacgaggcggcgggctagagctggtcggaaggaggctgtcg 1325 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 1326 cacatcgccagcctgtgcaaggtgccctttgaattcc 1362 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 1414 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 1473 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 1474 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagcctgtcgccga 1533 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 1534 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 1593 Query: 510 tc 511 || Sbjct: 1594 tc 1595
>dbj|AK122131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B20, full insert sequence Length = 2272 Score = 216 bits (109), Expect = 5e-53 Identities = 235/277 (84%) Strand = Plus / Plus Query: 2 ccctacttcaagttcggctacatgtcggccaacggcgccatcgcggaggccgtcaagggg 61 |||||||||||||| || || |||||||| || || || || || ||||| |||||||| Sbjct: 1134 ccctacttcaagtttgggtatatgtcggcaaatggtgctattgcagaggctgtcaaggga 1193 Query: 62 gaggacaggatccacataatcgacttccatatcgctcaaggagctcagtggatctccctc 121 || |||||||| || || ||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 1194 gaagacaggattcatatcatcgacttccatatctctcaaggggctcagtggatctctctc 1253 Query: 122 ctccaggcccttgcggccaggcccggcggaccgccgaccgtgaggatcaccggcattgat 181 || ||||||||||| |||||||| || ||||| || || || |||||||| || |||||| Sbjct: 1254 cttcaggcccttgcagccaggcctggtggaccaccaactgtaaggatcactggtattgat 1313 Query: 182 gactcggtgtcagcctacgcgcgaggcggcgggctggacctcgttgggaggagactgtcg 241 ||||| |||||||| ||||| |||||||||||| | || || || || ||||| |||||| Sbjct: 1314 gactcagtgtcagcttacgcacgaggcggcgggttagagctggtcggaaggaggctgtcg 1373 Query: 242 cacatcgccggcctctgcaaggttccctttgagttcc 278 ||||||||| |||| |||||||| |||||||| |||| Sbjct: 1374 cacatcgccagcctgtgcaaggtgccctttgaattcc 1410 Score = 163 bits (82), Expect = 7e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 330 tccccggggaggcactggcggtgaacttcaccctggagctgcaccacatcccggacgaga 389 |||||||||| || || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 1462 tccccggggaagccctcgccgtgaacttcaccctggagctgcaccacattccagacgagt 1521 Query: 390 cggtgagcacggcgaaccaccgggaccggatcctgcggctggtgaaggggctgaggccca 449 |||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||| | Sbjct: 1522 cggtgagcacggcgaaccaccgtgaccgcctcctaaggatggtgaagagcctgtcgccga 1581 Query: 450 aggtgctgaccctggtggagcaggagtccaacaccaacacggccccgttcccgcagaggt 509 |||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||| Sbjct: 1582 aggtactcaccctggtggagatggagtccaacacgaacacggcgccattcccgcagaggt 1641 Query: 510 tc 511 || Sbjct: 1642 tc 1643
>gb|AF337897.1|AF337897 Thelazia gulosa 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 532 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 292 ggccggcgaggaggtggaggagg 314 ||||||||||||||||||||||| Sbjct: 220 ggccggcgaggaggtggaggagg 198
>ref|NM_191254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 293 gccggcgaggaggtggaggagg 314 |||||||||||||||||||||| Sbjct: 303 gccggcgaggaggtggaggagg 282
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 298 cgaggaggtggaggaggggcacctcg 323 |||||||| ||||||||||||||||| Sbjct: 26248414 cgaggaggaggaggaggggcacctcg 26248389 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cgccatggccggcgaggaggt 306 ||||||||||||||||||||| Sbjct: 6624080 cgccatggccggcgaggaggt 6624100
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 gccggcgaggaggtggaggagg 314 |||||||||||||||||||||| Sbjct: 31557307 gccggcgaggaggtggaggagg 31557328 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 18591202 cggcgaggaggtggaggagg 18591221
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 gccggcgaggaggtggaggagg 314 |||||||||||||||||||||| Sbjct: 70330 gccggcgaggaggtggaggagg 70351
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 gccggcgaggaggtggaggagg 314 |||||||||||||||||||||| Sbjct: 151371 gccggcgaggaggtggaggagg 151392
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 298 cgaggaggtggaggaggggcacctcg 323 |||||||| ||||||||||||||||| Sbjct: 112954 cgaggaggaggaggaggggcacctcg 112929
>dbj|AK066545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069A19, full insert sequence Length = 2291 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 298 cgaggaggtggaggaggggcacctcg 323 |||||||| ||||||||||||||||| Sbjct: 129 cgaggaggaggaggaggggcacctcg 104
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cggcgccatcgcggaggccgtc 55 |||||||||||||||||||||| Sbjct: 3581905 cggcgccatcgcggaggccgtc 3581884
>ref|XM_475917.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2613 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 ggcgaggaggtggaggagggg 316 ||||||||||||||||||||| Sbjct: 57 ggcgaggaggtggaggagggg 37
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 ggcgaggaggtggaggagggg 316 ||||||||||||||||||||| Sbjct: 47716 ggcgaggaggtggaggagggg 47696
>ref|XM_959333.1| Neurospora crassa OR74A hypothetical protein (NCU03273.1) partial mRNA Length = 2730 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 ggcgaggaggtggaggaggggcacctcgg 324 ||||||||||||||||||| | ||||||| Sbjct: 284 ggcgaggaggtggaggaggtggacctcgg 312
>gb|AY541763.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase (GSTU38) gene, complete cds Length = 780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cgccatggccggcgaggaggt 306 ||||||||||||||||||||| Sbjct: 603 cgccatggccggcgaggaggt 623
>ref|XM_330708.1| Neurospora crassa OR74A hypothetical protein (NCU03273.1) partial mRNA Length = 2730 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 ggcgaggaggtggaggaggggcacctcgg 324 ||||||||||||||||||| | ||||||| Sbjct: 284 ggcgaggaggtggaggaggtggacctcgg 312
>gb|AC182696.2| Populus trichocarpa clone Pop1-69I10, complete sequence Length = 92421 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 gctgaccctggtggagcagga 474 ||||||||||||||||||||| Sbjct: 16707 gctgaccctggtggagcagga 16687
>gb|AE004421.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 78 of 93 of the complete chromosome Length = 10658 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 gaggaggtggaggaggggcac 319 ||||||||||||||||||||| Sbjct: 7291 gaggaggtggaggaggggcac 7271
>gb|AY224426.1| Oryza sativa (japonica cultivar-group) isolate 20145 scarecrow transcriptional regulator-like protein mRNA, complete cds Length = 1857 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 456 tgaccctggtggagcaggagtccaacaccaacacggc 492 |||||||||||||||||||| ||||| |||||||| Sbjct: 1454 tgaccctggtggagcaggagctgaacacgaacacggc 1490
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 gccggcgaggaggtggaggag 313 ||||||||||||||||||||| Sbjct: 14573759 gccggcgaggaggtggaggag 14573739
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 ggcgaggaggtggaggagggg 316 ||||||||||||||||||||| Sbjct: 28412792 ggcgaggaggtggaggagggg 28412772 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 4187300 cggcgaggaggtggaggagg 4187281
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 456 tgaccctggtggagcaggagtccaacaccaacacggc 492 |||||||||||||||||||| ||||| |||||||| Sbjct: 27873004 tgaccctggtggagcaggagctgaacacgaacacggc 27872968
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 gccggcgaggaggtggaggag 313 ||||||||||||||||||||| Sbjct: 72048 gccggcgaggaggtggaggag 72028
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cgccatggccggcgaggaggt 306 ||||||||||||||||||||| Sbjct: 58206 cgccatggccggcgaggaggt 58226
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 456 tgaccctggtggagcaggagtccaacaccaacacggc 492 |||||||||||||||||||| ||||| |||||||| Sbjct: 456 tgaccctggtggagcaggagctgaacacgaacacggc 420
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 456 tgaccctggtggagcaggagtccaacaccaacacggc 492 |||||||||||||||||||| ||||| |||||||| Sbjct: 158337 tgaccctggtggagcaggagctgaacacgaacacggc 158301
>dbj|AK120775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009G09, full insert sequence Length = 2141 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 456 tgaccctggtggagcaggagtccaacaccaacacggc 492 |||||||||||||||||||| ||||| |||||||| Sbjct: 1520 tgaccctggtggagcaggagctgaacacgaacacggc 1556
>ref|NM_193662.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2433 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 898 cggcgaggaggtggaggagg 917
>ref|NM_189817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 570 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 27 cggcgaggaggtggaggagg 8
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gtgaggatcaccggcattga 180 |||||||||||||||||||| Sbjct: 66649 gtgaggatcaccggcattga 66668
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 73779 cggcgaggaggtggaggagg 73760
>ref|XM_414522.1| PREDICTED: Gallus gallus similar to ARF-GAP, RHO-GAP, ankyrin repeat and plekstrin homology domains-containing protein 3; phosphoinositide binding protein; PtdIns(3,4,5)P3-binding protein (LOC416196), partial mRNA Length = 3595 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cttcaccctggagctgcacc 374 |||||||||||||||||||| Sbjct: 1334 cttcaccctggagctgcacc 1353
>gb|AC125052.4| Mus musculus BAC clone RP23-388L12 from chromosome 5, complete sequence Length = 217001 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tccacataatcgacttccat 91 |||||||||||||||||||| Sbjct: 190836 tccacataatcgacttccat 190817
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gaccgtgaggatcaccggca 176 |||||||||||||||||||| Sbjct: 2488323 gaccgtgaggatcaccggca 2488342
>gb|AY207497.1| Chlamydomonas reinhardtii CR057 protein gene, complete cds Length = 4765 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catggccggcgaggaggtgg 308 |||||||||||||||||||| Sbjct: 1833 catggccggcgaggaggtgg 1852
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 gccggcgaggaggtggaggagggg 316 ||||||||||||| |||||||||| Sbjct: 2860567 gccggcgaggaggaggaggagggg 2860544
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gtcgccatggccggcgagga 303 |||||||||||||||||||| Sbjct: 723983 gtcgccatggccggcgagga 724002
>gb|AC095022.4| Sus scrofa clone RP44-374C1, complete sequence Length = 61497 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 gtccaacaccaacacggccc 494 |||||||||||||||||||| Sbjct: 37288 gtccaacaccaacacggccc 37307
>ref|XM_502854.1| Yarrowia lipolytica CLIB122, YALI0D15304g predicted mRNA Length = 4905 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 gaggaggtggaggaggggcacctc 322 ||||||||||||||||||| |||| Sbjct: 4696 gaggaggtggaggaggggctcctc 4673
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ggaccggatcctgcggctgg 431 |||||||||||||||||||| Sbjct: 60805 ggaccggatcctgcggctgg 60786
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcccaaggtgctgaccctgg 464 |||||||||||||||||||| Sbjct: 1489035 gcccaaggtgctgaccctgg 1489054
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 catggccggcgaggaggtgg 308 |||||||||||||||||||| Sbjct: 65592 catggccggcgaggaggtgg 65573
>gb|AE012336.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 244 of 460 of the complete genome Length = 10286 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gcgcgaggcggcgggctgga 219 |||||||||||||||||||| Sbjct: 3515 gcgcgaggcggcgggctgga 3496
>gb|AC099680.2| Homo sapiens chromosome 1 clone RP4-700A9, complete sequence Length = 89056 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ggcgaggaggtggaggaggg 315 |||||||||||||||||||| Sbjct: 15057 ggcgaggaggtggaggaggg 15076
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 gcgcgaggcggcgggctgga 219 |||||||||||||||||||| Sbjct: 2222529 gcgcgaggcggcgggctgga 2222548
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cgcgcgaggcggcgggctgg 218 |||||||||||||||||||| Sbjct: 4946973 cgcgcgaggcggcgggctgg 4946954
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 ggtcgccatggccggcgagg 302 |||||||||||||||||||| Sbjct: 24014505 ggtcgccatggccggcgagg 24014486 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tggccggcgaggaggtggaggagg 314 ||||||||||||||| |||||||| Sbjct: 22273720 tggccggcgaggaggaggaggagg 22273697
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gtgaggatcaccggcattga 180 |||||||||||||||||||| Sbjct: 28261847 gtgaggatcaccggcattga 28261866
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 gccggcgaggaggtggaggagggg 316 ||||||||||||| |||||||||| Sbjct: 2860678 gccggcgaggaggaggaggagggg 2860655
>gb|AF230879.1|AF230879 Pseudomonas aureofaciens putative phenazine hydroxylase PhzO (phzO) gene, complete cds; and putative gamma-glutamyltranspeptidase precursor GgtB (ggtB) gene, partial cds Length = 2869 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 ggtgctgaccctggtggagc 470 |||||||||||||||||||| Sbjct: 2492 ggtgctgaccctggtggagc 2511
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 gccggcgaggaggtggaggagggg 316 ||||||||||||| |||||||||| Sbjct: 132523 gccggcgaggaggaggaggagggg 132500
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 atatcgctcaaggagctcag 109 |||||||||||||||||||| Sbjct: 2698336 atatcgctcaaggagctcag 2698355
>dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0516D04 Length = 140491 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 14475 cggcgaggaggtggaggagg 14494
>dbj|AK187656.1| Mus musculus cDNA, clone:Y0G0142J16, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026124, based on BLAT search Length = 424 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 aggaggtggaggaggggcac 319 |||||||||||||||||||| Sbjct: 125 aggaggtggaggaggggcac 106
>dbj|AK178545.1| Mus musculus cDNA, clone:Y0G0107C09, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026124, based on BLAT search Length = 440 Score = 40.1 bits (20), Expect = 6.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 292 ggccggcgaggaggtggaggaggggca 318 ||||||| ||||| ||||||||||||| Sbjct: 422 ggccggccaggagntggaggaggggca 396
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 109087 cggcgaggaggtggaggagg 109068
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 39714 cggcgaggaggtggaggagg 39695
>dbj|AK070875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075H05, full insert sequence Length = 1898 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 gccggcgaggaggtggaggagggg 316 ||||||||||||| |||||||||| Sbjct: 62 gccggcgaggaggaggaggagggg 39
>dbj|AK068085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131P13, full insert sequence Length = 1515 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggcgaggaggtggaggagg 314 |||||||||||||||||||| Sbjct: 377 cggcgaggaggtggaggagg 396
>dbj|AK063519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H06, full insert sequence Length = 2147 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gtgaggatcaccggcattga 180 |||||||||||||||||||| Sbjct: 1262 gtgaggatcaccggcattga 1281
>tpe|BN000565.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx36 gene for class III peroxidase 36 precursor, exons 1-2 Length = 1564 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 gccggcgaggaggtggaggagggg 316 ||||||||||||| |||||||||| Sbjct: 39 gccggcgaggaggaggaggagggg 16
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gtgaggatcaccggcattga 180 |||||||||||||||||||| Sbjct: 28246426 gtgaggatcaccggcattga 28246445
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 ggtcgccatggccggcgagg 302 |||||||||||||||||||| Sbjct: 23942711 ggtcgccatggccggcgagg 23942692 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tggccggcgaggaggtggaggagg 314 ||||||||||||||| |||||||| Sbjct: 22202065 tggccggcgaggaggaggaggagg 22202042
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tggccggcgaggaggtggaggagg 314 ||||||||||||||| |||||||| Sbjct: 88034 tggccggcgaggaggaggaggagg 88057
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ggtcgccatggccggcgagg 302 |||||||||||||||||||| Sbjct: 72891 ggtcgccatggccggcgagg 72910
>gb|AC156981.13| Mus musculus chromosome 18, clone RP23-145E3, complete sequence Length = 210762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 gaggtggaggaggggcacct 321 |||||||||||||||||||| Sbjct: 99755 gaggtggaggaggggcacct 99736
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 gaggaggtggaggaggggcacctc 322 ||||||||||||||||||| |||| Sbjct: 1860332 gaggaggtggaggaggggctcctc 1860355
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aggcccggcggaccgccgac 159 |||||||||||||||||||| Sbjct: 2846704 aggcccggcggaccgccgac 2846723 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 cggcgaaccaccgggaccgg 418 |||||||||||||||||||| Sbjct: 1228196 cggcgaaccaccgggaccgg 1228215 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,743,501 Number of Sequences: 3902068 Number of extensions: 3743501 Number of successful extensions: 89104 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87450 Number of HSP's gapped (non-prelim): 1654 length of query: 511 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 488 effective length of database: 17,143,297,704 effective search space: 8365929279552 effective search space used: 8365929279552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)