>U235_MOUSE (Q9CRC3) UPF0235 protein C15orf40 homolog|
          Length = 126

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +2

Query: 5   EAXGVQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVV-LVQDTT 166
           EA GV I AP  +GEANA L  ++S VL + K +V +  G KSREKVV L+  TT
Sbjct: 57  EAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVVKLLASTT 111

>U235_HUMAN (Q8WUR7) UPF0235 protein C15orf40|
          Length = 126

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +2

Query: 5   EAXGVQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVV-LVQDTT 166
           EA  V I AP  +GEANA L  ++S VL + K +V +  G KSREKVV L+  TT
Sbjct: 57  EAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVVKLLASTT 111

>Y182_AERPE (Q9YFR7) UPF0235 protein APE0182|
          Length = 113

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/45 (40%), Positives = 29/45 (64%)
 Frame = +2

Query: 26  DAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVVLVQD 160
           D P  +G ANA L++F++  L V  + + I  G++SR KVV ++D
Sbjct: 51  DEPPLEGRANASLINFLARGLKVSVKNIEIVHGARSRSKVVEIRD 95

>Y1994_SYNEL (Q8DHG5) UPF0235 protein tsr1994|
          Length = 74

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 17  VQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVVLVQD 160
           V + AP  DG+AN  L+  +++  GV K  + +  G  SR KV+ + D
Sbjct: 27  VTVRAPASDGQANQELIALLAAYFGVPKSRIQLVKGHTSRHKVIELLD 74

>Y1313_PASMU (Q9CLC6) UPF0235 protein PM1313|
          Length = 99

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 17  VQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVVLV 154
           + I AP  DG+ANA L+ F+S    V K  + +  G  +R K +L+
Sbjct: 39  ITITAPPIDGQANAHLLKFLSKTFKVPKSSIVLEKGELNRHKQILI 84

>Y501_PYRAB (Q9V1C6) UPF0235 protein PYRAB05010|
          Length = 92

 Score = 34.7 bits (78), Expect = 0.072
 Identities = 23/54 (42%), Positives = 30/54 (55%)
 Frame = +2

Query: 17  VQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVVLVQDTTLKGV 178
           V I A    G+AN  L+ F+S++ G    EV I  G  SREK VLV+   L+ V
Sbjct: 36  VNIKAQPVKGKANRELIKFLSNLFGA---EVEILKGETSREKDVLVRGVNLEEV 86

>Y395_NITEU (Q82X93) UPF0235 protein NE0395|
          Length = 100

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 5   EAXGVQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVVLV 154
           E   +++ A   DG+AN  L +F++    V ++ + +  G +SR KVV V
Sbjct: 34  EELKIKLAALPVDGKANRALTEFLAKRFNVPRKNITLKRGEQSRHKVVEV 83

>Y458_VIBCH (Q9KUQ7) UPF0235 protein VC0458|
          Length = 96

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 5   EAXGVQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVVLV 154
           E   V I AP  DG+ANA L  +++ +  V K  V +  G   R K V +
Sbjct: 32  EELKVAITAPPIDGKANAHLSKYLAKLCKVAKGSVVVEKGELGRHKQVRI 81

>Y2619_VIBPA (Q87LJ3) UPF0235 protein VP2619|
          Length = 96

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 5   EAXGVQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVVLVQ 157
           E   + I AP  DG+ANA L  F++    + K  V I  G   R K + ++
Sbjct: 33  EELKIAITAPPVDGKANAHLTKFLAKQFKIAKGLVHIEKGELGRHKQIRIE 83

>Y3356_SHEON (Q8EBY9) UPF0235 protein SO3356|
          Length = 96

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 17  VQIDAPXRDGEANAGLVDFISSVLGVXKREVXIGSGSKSREKVVLV 154
           V I AP  DG+ANA L  +++    V K +V I  G   R K V +
Sbjct: 36  VAITAPPIDGKANAHLSKYLAKAFKVPKSDVHILKGELGRHKQVRI 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,204,550
Number of Sequences: 219361
Number of extensions: 231011
Number of successful extensions: 778
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)