No.
Definition
Score (bits)
E Value
1 emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4,...
147
5e-32
2 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
147
5e-32
3 emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clon...
147
5e-32
4 emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...
147
5e-32
5 emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4,...
145
2e-31
6 gb|AF165138.1| Homo sapiens PAC B39I12 derived from chromosome 2...
42
2.0
7 ref|XM_755772.1| Ustilago maydis 521 hypothetical protein (UM047...
42
2.0
8 emb|Z83129.1|CEW06G6 Caenorhabditis elegans Cosmid W06G6, comple...
42
2.0
9 emb|AL163206.2|HS21C006 Homo sapiens chromosome 21 segment HS21C006
42
2.0
10 ref|XM_782231.1| PREDICTED: Strongylocentrotus purpuratus simila...
42
2.0
11 gb|AC118465.2| Homo sapiens chromosome 5 clone RP11-950K24, comp...
42
2.0
12 gb|AC008169.2| Homo sapiens BAC clone RP11-252D22 from 2, comple...
42
2.0
13 emb|AL954701.10| Mouse DNA sequence from clone RP23-43J11 on chr...
42
2.0
14 dbj|BS000010.1| Pan troglodytes chromosome 22 clone:PTB-095F11, ...
42
2.0
15 gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
42
2.0
16 gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OAB...
40
7.8
17 gb|AE001421.2| Plasmodium falciparum 3D7 chromosome 2 section 58...
40
7.8
18 gb|AC113485.19| Mus musculus chromosome 19, clone RP23-346D12, c...
40
7.8
19 ref|XM_421873.1| PREDICTED: Gallus gallus similar to receptor-ac...
40
7.8
20 gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome...
40
7.8
21 gb|AC132235.3| Mus musculus BAC clone RP24-497H15 from chromosom...
40
7.8
22 ref|NM_052947.2| Homo sapiens heart alpha-kinase (HAK), mRNA
40
7.8
23 gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp...
40
7.8
24 gb|AC132251.3| Mus musculus BAC clone RP24-447I16 from chromosom...
40
7.8
25 emb|AL713851.8| Human DNA sequence from clone RP11-526P5 on chro...
40
7.8
26 emb|AL353135.32| Human DNA sequence from clone RP11-63L7 on chro...
40
7.8
27 emb|AL158850.8| Human DNA sequence from clone RP3-522B19 on chro...
40
7.8
28 emb|AL139039.17| Human DNA sequence from clone RP11-360O19 on ch...
40
7.8
29 gb|AC008620.12| Homo sapiens chromosome 5 clone CTB-14A14, compl...
40
7.8
30 emb|BX571867.1| Photorhabdus luminescens subsp. laumondii TTO1 c...
40
7.8
31 emb|AL832018.2|HSM803325 Homo sapiens mRNA; cDNA DKFZp451G074 (f...
40
7.8
32 gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
40
7.8
33 dbj|AK125262.1| Homo sapiens cDNA FLJ43272 fis, clone KIDNE2003837
40
7.8
34 dbj|AK092194.1| Homo sapiens cDNA FLJ34875 fis, clone NT2NE2015262
40
7.8
35 dbj|AK092133.1| Homo sapiens cDNA FLJ34814 fis, clone NT2NE2007727
40
7.8
36 gb|AC103792.2| Homo sapiens chromosome 11, clone CTD-2384B9, com...
40
7.8
37 dbj|AK143931.1| Mus musculus adult male kidney cDNA, RIKEN full-...
40
7.8
38 gb|AC019077.9| Homo sapiens BAC clone RP11-323J4 from 4, complet...
40
7.8
39 gb|AY044450.1| Homo sapiens heart alpha-kinase (HAK) mRNA, compl...
40
7.8
40 gb|AC158130.7| Mus musculus chromosome 19, clone RP24-360F11, co...
40
7.8
41 gb|AC078961.23| Homo sapiens 4 BAC RP11-486H4 (Roswell Park Canc...
40
7.8
42 gb|AC158627.6| Mus musculus 10 BAC RP23-451N6 (Roswell Park Canc...
40
7.8
43 emb|BX936098.2| Gallus gallus finished cDNA, clone ChEST485f1
40
7.8
44 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.8
45 gb|AC097480.3| Homo sapiens BAC clone RP11-123O22 from 4, comple...
40
7.8
46 ref|NM_214193.1| Sus scrofa calcium/calmodulin-dependent protein...
40
7.8
47 gb|AC105105.10| Homo sapiens chromosome 18, clone RP11-1151B14, ...
40
7.8
48 gb|AC010872.8| Homo sapiens BAC clone RP11-83B6 from 2, complete...
40
7.8
49 emb|BX647639.1|HSM807785 Homo sapiens mRNA; cDNA DKFZp451J236 (f...
40
7.8
50 emb|BX647446.1|HSM807591 Homo sapiens mRNA; cDNA DKFZp451C077 (f...
40
7.8
51 emb|BX647796.1|HSM807942 Homo sapiens mRNA; cDNA DKFZp686G2187 (...
40
7.8
52 emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chrom...
40
7.8
53 emb|BX544888.2| Mouse DNA sequence from clone RP24-232N15 on chr...
40
7.8
54 gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
40
7.8
55 emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp...
40
7.8
56 gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ...
40
7.8
57 gb|AE015451.1| Pseudomonas putida KT2440 complete genome
40
7.8
58 gb|AC104971.5| Homo sapiens chromosome 18, clone RP11-126O1, com...
40
7.8
59 dbj|AB093137.1| Mus musculus gene for liver type neutral ceramid...
40
7.8
60 gb|U72973.1|SSU72973 Sus scrofa calcium/calmodulin-dependent pro...
40
7.8
61 gb|U72972.1|SSU72972 Sus scrofa calcium/calmodulin-dependent pro...
40
7.8
62 gb|U72971.1|SSU72971 Sus scrofa calcium/calmodulin-dependent pro...
40
7.8
63 gb|U72970.1|SSU72970 Sus scrofa calcium/calmodulin-dependent pro...
40
7.8
64 gb|AC153540.4| Mus musculus 10 BAC RP23-356N9 (Roswell Park Canc...
40
7.8
65 dbj|AP002015.3| Homo sapiens genomic DNA, chromosome 4q22-q24, c...
40
7.8
66 dbj|AB024603.1| Burkholderia cepacia gene for tetrahydrodipicoli...
40
7.8
67 dbj|AB024602.1| Pseudomonas putida dapD gene for tetrahydrodipic...
40
7.8
>emb|AL606668.2 |OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10,
complete sequence
Length = 150206
Score = 147 bits (74), Expect = 5e-32
Identities = 125/142 (88%)
Strand = Plus / Minus
Query: 93 aggctctgctgctggacgtgagagacaagcttctctttgaacaggagtacgcaggaagca 152
||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1655 aggctctgctggtagatgtgagagacaaacttctctttgaacaggagtacgcaggaagca 1596
Query: 153 ccagggccaaggttccgcccagatcctctcttcatataccctggagctggttgcctgctg 212
| | ||| |||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1595 taaaagaaaagcttccacccagatcctctcttcatataccttggagttggttgcctgctg 1536
Query: 213 ccttgtgtgtcttgcaggaggt 234
| | |||||||||||||||||
Sbjct: 1535 cactttgtgtcttgcaggaggt 1514
Score = 145 bits (73), Expect = 2e-31
Identities = 103/113 (91%)
Strand = Plus / Minus
Query: 344 attgcaaaagctagctttgaaaaaagtaaagtatctcttggctttgaggctctagcacgt 403
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 840 attgcaaaagctagctttgagaaaagtaaagtgtctcttggctttgaagctctagcacgt 781
Query: 404 gctcaatatcttttgaggaaaaaaccatctttagagaagatgcctcttcttga 456
|||||||| || ||||||| |||||| ||||| |||||| |||| ||||||||
Sbjct: 780 gctcaatacctgttgaggagaaaaccgtctttggagaagttgccccttcttga 728
Score = 133 bits (67), Expect = 7e-28
Identities = 97/107 (90%)
Strand = Plus / Minus
Query: 231 aggttggggaagagaagctggtcttggacattggtcaggcagctctacgacgccctgatt 290
||||||| ||||||||||| || ||||| ||||||||||| |||||||||||||| ||||
Sbjct: 1030 aggttggagaagagaagctagttttggaaattggtcaggcggctctacgacgcccagatt 971
Query: 291 ctaagccatatgctcacgatgtacttcttgcaatggcactagctgaa 337
||| |||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 970 ctaggccatatgttcatgatgtgcttcttgcaatggcactagctgaa 924
Score = 117 bits (59), Expect = 4e-23
Identities = 101/115 (87%)
Strand = Plus / Minus
Query: 459 agatcgaagaatcacttgaagagcttgcaccagcttgcactctagaggttttaagcctgc 518
|||| |||||||||||||||||||||||||| ||||||||||| ||| || ||||| | |
Sbjct: 645 agattgaagaatcacttgaagagcttgcacctgcttgcactctggagcttctaagcttac 586
Query: 519 cccgtacacctgaaaattctgaacgcaggcgtggtgctattgcagctctctgtga 573
| | ||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 585 ctcagacacctgaaaacgctgaacgcaggcagggtgctattgcagctctctgtga 531
Score = 40.1 bits (20), Expect = 7.8
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 56 gaagatgggtacacggaggaggtgtccacctgcagacagg 95
||||| ||||||| || |||||||| |||||||||||||
Sbjct: 1807 gaagacgggtacatggcagaggtgtctacctgcagacagg 1768
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 147 bits (74), Expect = 5e-32
Identities = 125/142 (88%)
Strand = Plus / Minus
Query: 93 aggctctgctgctggacgtgagagacaagcttctctttgaacaggagtacgcaggaagca 152
||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 34547533 aggctctgctggtagatgtgagagacaaacttctctttgaacaggagtacgcaggaagca 34547474
Query: 153 ccagggccaaggttccgcccagatcctctcttcatataccctggagctggttgcctgctg 212
| | ||| |||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 34547473 taaaagaaaagcttccacccagatcctctcttcatataccttggagttggttgcctgctg 34547414
Query: 213 ccttgtgtgtcttgcaggaggt 234
| | |||||||||||||||||
Sbjct: 34547413 cactttgtgtcttgcaggaggt 34547392
Score = 145 bits (73), Expect = 2e-31
Identities = 103/113 (91%)
Strand = Plus / Minus
Query: 344 attgcaaaagctagctttgaaaaaagtaaagtatctcttggctttgaggctctagcacgt 403
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 34546718 attgcaaaagctagctttgagaaaagtaaagtgtctcttggctttgaagctctagcacgt 34546659
Query: 404 gctcaatatcttttgaggaaaaaaccatctttagagaagatgcctcttcttga 456
|||||||| || ||||||| |||||| ||||| |||||| |||| ||||||||
Sbjct: 34546658 gctcaatacctgttgaggagaaaaccgtctttggagaagttgccccttcttga 34546606
Score = 133 bits (67), Expect = 7e-28
Identities = 97/107 (90%)
Strand = Plus / Minus
Query: 231 aggttggggaagagaagctggtcttggacattggtcaggcagctctacgacgccctgatt 290
||||||| ||||||||||| || ||||| ||||||||||| |||||||||||||| ||||
Sbjct: 34546908 aggttggagaagagaagctagttttggaaattggtcaggcggctctacgacgcccagatt 34546849
Query: 291 ctaagccatatgctcacgatgtacttcttgcaatggcactagctgaa 337
||| |||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 34546848 ctaggccatatgttcatgatgtgcttcttgcaatggcactagctgaa 34546802
Score = 117 bits (59), Expect = 4e-23
Identities = 101/115 (87%)
Strand = Plus / Minus
Query: 459 agatcgaagaatcacttgaagagcttgcaccagcttgcactctagaggttttaagcctgc 518
|||| |||||||||||||||||||||||||| ||||||||||| ||| || ||||| | |
Sbjct: 34546523 agattgaagaatcacttgaagagcttgcacctgcttgcactctggagcttctaagcttac 34546464
Query: 519 cccgtacacctgaaaattctgaacgcaggcgtggtgctattgcagctctctgtga 573
| | ||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 34546463 ctcagacacctgaaaacgctgaacgcaggcagggtgctattgcagctctctgtga 34546409
Score = 40.1 bits (20), Expect = 7.8
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 56 gaagatgggtacacggaggaggtgtccacctgcagacagg 95
||||| ||||||| || |||||||| |||||||||||||
Sbjct: 34547685 gaagacgggtacatggcagaggtgtctacctgcagacagg 34547646
>emb|AL732350.3 | Oryza sativa genomic DNA, chromosome 4, BAC clone: H0101F08, complete
sequence
Length = 63897
Score = 147 bits (74), Expect = 5e-32
Identities = 125/142 (88%)
Strand = Plus / Minus
Query: 93 aggctctgctgctggacgtgagagacaagcttctctttgaacaggagtacgcaggaagca 152
||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1107 aggctctgctggtagatgtgagagacaaacttctctttgaacaggagtacgcaggaagca 1048
Query: 153 ccagggccaaggttccgcccagatcctctcttcatataccctggagctggttgcctgctg 212
| | ||| |||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1047 taaaagaaaagcttccacccagatcctctcttcatataccttggagttggttgcctgctg 988
Query: 213 ccttgtgtgtcttgcaggaggt 234
| | |||||||||||||||||
Sbjct: 987 cactttgtgtcttgcaggaggt 966
Score = 137 bits (69), Expect = 4e-29
Identities = 102/113 (90%)
Strand = Plus / Minus
Query: 344 attgcaaaagctagctttgaaaaaagtaaagtatctcttggctttgaggctctagcacgt 403
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 253 attgcaaaagctagctttgagaaaagtaaagtgtctcttggctttgaagctctagcacgt 194
Query: 404 gctcaatatcttttgaggaaaaaaccatctttagagaagatgcctcttcttga 456
|||||||| || ||||||| |||||| ||||| |||||| || | ||||||||
Sbjct: 193 gctcaatacctgttgaggagaaaaccgtctttggagaagttgtcccttcttga 141
Score = 117 bits (59), Expect = 4e-23
Identities = 95/107 (88%)
Strand = Plus / Minus
Query: 231 aggttggggaagagaagctggtcttggacattggtcaggcagctctacgacgccctgatt 290
||||||| ||||||||||| || ||||| |||||||| || |||||||||||||| ||||
Sbjct: 443 aggttggagaagagaagctagttttggaaattggtcatgcggctctacgacgcccagatt 384
Query: 291 ctaagccatatgctcacgatgtacttcttgcaatggcactagctgaa 337
||| |||||||| ||| ||| | ||||||||||||||||||||||||
Sbjct: 383 ctaggccatatgttcatgatatgcttcttgcaatggcactagctgaa 337
Score = 71.9 bits (36), Expect = 2e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 459 agatcgaagaatcacttgaagagcttgcaccagcttgcactctagaggttttaagc 514
|||| |||||||||||||||||||||||||| ||||||||||| ||| || |||||
Sbjct: 58 agattgaagaatcacttgaagagcttgcacctgcttgcactctggagcttctaagc 3
Score = 40.1 bits (20), Expect = 7.8
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 56 gaagatgggtacacggaggaggtgtccacctgcagacagg 95
||||| ||||||| || |||||||| |||||||||||||
Sbjct: 1259 gaagacgggtacatggcagaggtgtctacctgcagacagg 1220
>emb|AL732351.2 | Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete
sequence
Length = 104146
Score = 147 bits (74), Expect = 5e-32
Identities = 125/142 (88%)
Strand = Plus / Minus
Query: 93 aggctctgctgctggacgtgagagacaagcttctctttgaacaggagtacgcaggaagca 152
||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 83414 aggctctgctggtagatgtgagagacaaacttctctttgaacaggagtacgcaggaagca 83355
Query: 153 ccagggccaaggttccgcccagatcctctcttcatataccctggagctggttgcctgctg 212
| | ||| |||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 83354 taaaagaaaagcttccacccagatcctctcttcatataccttggagttggttgcctgctg 83295
Query: 213 ccttgtgtgtcttgcaggaggt 234
| | |||||||||||||||||
Sbjct: 83294 cactttgtgtcttgcaggaggt 83273
Score = 137 bits (69), Expect = 4e-29
Identities = 102/113 (90%)
Strand = Plus / Minus
Query: 344 attgcaaaagctagctttgaaaaaagtaaagtatctcttggctttgaggctctagcacgt 403
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 82560 attgcaaaagctagctttgagaaaagtaaagtgtctcttggctttgaagctctagcacgt 82501
Query: 404 gctcaatatcttttgaggaaaaaaccatctttagagaagatgcctcttcttga 456
|||||||| || ||||||| |||||| ||||| |||||| || | ||||||||
Sbjct: 82500 gctcaatacctgttgaggagaaaaccgtctttggagaagttgtcccttcttga 82448
Score = 117 bits (59), Expect = 4e-23
Identities = 95/107 (88%)
Strand = Plus / Minus
Query: 231 aggttggggaagagaagctggtcttggacattggtcaggcagctctacgacgccctgatt 290
||||||| ||||||||||| || ||||| |||||||| || |||||||||||||| ||||
Sbjct: 82750 aggttggagaagagaagctagttttggaaattggtcatgcggctctacgacgcccagatt 82691
Query: 291 ctaagccatatgctcacgatgtacttcttgcaatggcactagctgaa 337
||| |||||||| ||| ||| | ||||||||||||||||||||||||
Sbjct: 82690 ctaggccatatgttcatgatatgcttcttgcaatggcactagctgaa 82644
Score = 109 bits (55), Expect = 1e-20
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 459 agatcgaagaatcacttgaagagcttgcaccagcttgcactctagaggttttaagcctgc 518
|||| |||||||||||||||||||||||||| ||||||||||| ||| || ||||| | |
Sbjct: 82365 agattgaagaatcacttgaagagcttgcacctgcttgcactctggagcttctaagcttac 82306
Query: 519 cccgtacacctgaaaattctgaacgcaggcgtggtgctattgcagctctct 569
| | ||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 82305 ctcagacacctgaaaacgctgaacgcaggcagggtgctattgcagctctct 82255
Score = 40.1 bits (20), Expect = 7.8
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 56 gaagatgggtacacggaggaggtgtccacctgcagacagg 95
||||| ||||||| || |||||||| |||||||||||||
Sbjct: 83566 gaagacgggtacatggcagaggtgtctacctgcagacagg 83527
>emb|AL606457.3 |OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05,
complete sequence
Length = 164943
Score = 145 bits (73), Expect = 2e-31
Identities = 103/113 (91%)
Strand = Plus / Minus
Query: 344 attgcaaaagctagctttgaaaaaagtaaagtatctcttggctttgaggctctagcacgt 403
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 164202 attgcaaaagctagctttgagaaaagtaaagtgtctcttggctttgaagctctagcacgt 164143
Query: 404 gctcaatatcttttgaggaaaaaaccatctttagagaagatgcctcttcttga 456
|||||||| || ||||||| |||||| ||||| |||||| |||| ||||||||
Sbjct: 164142 gctcaatacctgttgaggagaaaaccgtctttggagaagttgccccttcttga 164090
Score = 133 bits (67), Expect = 7e-28
Identities = 97/107 (90%)
Strand = Plus / Minus
Query: 231 aggttggggaagagaagctggtcttggacattggtcaggcagctctacgacgccctgatt 290
||||||| ||||||||||| || ||||| ||||||||||| |||||||||||||| ||||
Sbjct: 164392 aggttggagaagagaagctagttttggaaattggtcaggcggctctacgacgcccagatt 164333
Query: 291 ctaagccatatgctcacgatgtacttcttgcaatggcactagctgaa 337
||| |||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 164332 ctaggccatatgttcatgatgtgcttcttgcaatggcactagctgaa 164286
Score = 117 bits (59), Expect = 4e-23
Identities = 101/115 (87%)
Strand = Plus / Minus
Query: 459 agatcgaagaatcacttgaagagcttgcaccagcttgcactctagaggttttaagcctgc 518
|||| |||||||||||||||||||||||||| ||||||||||| ||| || ||||| | |
Sbjct: 164007 agattgaagaatcacttgaagagcttgcacctgcttgcactctggagcttctaagcttac 163948
Query: 519 cccgtacacctgaaaattctgaacgcaggcgtggtgctattgcagctctctgtga 573
| | ||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 163947 ctcagacacctgaaaacgctgaacgcaggcagggtgctattgcagctctctgtga 163893
Score = 89.7 bits (45), Expect = 9e-15
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 170 cccagatcctctcttcatataccctggagctggttgcctgctgccttgtgtgtcttgcag 229
||||||||||||||||||||||| ||||| |||||||||||||| | ||||||||||||
Sbjct: 164940 cccagatcctctcttcatataccttggagttggttgcctgctgcactttgtgtcttgcag 164881
Query: 230 gaggt 234
|||||
Sbjct: 164880 gaggt 164876
>emb|AL353135.32 | Human DNA sequence from clone RP11-63L7 on chromosome 6 Contains the
PROL2 gene for proline rich 2 (proline-rich protein with
nuclear targeting signal), the gene for NB4
apoptosis/differentiation related protein (PNAS-145), the
gene for serine-arginine repressor protein (35kDa)
(SRrp35), the gene for a novel protein similar to putative
amidohydrolase, the 3' end of the GABRR1 gene for
gamma-aminobutyric acid (GABA) receptor, rho 1 and 3 CpG
islands, complete sequence
Length = 127653
Score = 40.1 bits (20), Expect = 7.8
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 363 aaaaaagtaaagtatctcttggct 386
||||||||||||||| ||||||||
Sbjct: 54460 aaaaaagtaaagtatttcttggct 54483
>emb|AL139039.17 | Human DNA sequence from clone RP11-360O19 on chromosome 6 Contains a
novel gene, a glucosaminyl (N-acetyl) transferase 1 core 2
(beta-1,6-N-acetylglucosaminyltransferase) (GCNT1)
pseudogene, the gene for a novel protein similar to GCNT1,
the 5' end of the GCNT2 gene for glucosaminyl (N-acetyl)
transferase 2 I-branching enzyme and a ribosomal protein
L21 (RPL21) pseudogene, complete sequence
Length = 87636
Score = 40.1 bits (20), Expect = 7.8
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 549 gtggtgctattgcagctctctgtg 572
|||||||||||||||||| |||||
Sbjct: 45806 gtggtgctattgcagctcactgtg 45783
>gb|AY542311.1 | Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
hypothetical protein, putative NAM protein, putative
cis-zeatin O-glucosyltransferases, putative small nuclear
ribonucleoprotein, putative cis-zeatin
O-glucosyltransferase, putative glutathione peroxidase,
putative copper-exporting ATPases, putative
serine/threonine dehydratase, and putative actin
depolymerizing factor genes, complete cds; and hypothetical
protein gene, partial cds
Length = 157237
Score = 40.1 bits (20), Expect = 7.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 269 gcagctctacgacgccctga 288
||||||||||||||||||||
Sbjct: 100591 gcagctctacgacgccctga 100610
>dbj|AB024602.1 | Pseudomonas putida dapD gene for tetrahydrodipicolinate
N-succinyltransferase, complete cds, strain KT2440
Length = 12537
Score = 40.1 bits (20), Expect = 7.8
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 caagtcggccatcgagctga 41
||||||||||||||||||||
Sbjct: 2008 caagtcggccatcgagctga 1989
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,786,650
Number of Sequences: 3902068
Number of extensions: 5786650
Number of successful extensions: 124660
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124309
Number of HSP's gapped (non-prelim): 351
length of query: 573
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 550
effective length of database: 17,143,297,704
effective search space: 9428813737200
effective search space used: 9428813737200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)