Clone Information

BLAST Search Result

Clone Name	bah63l22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3	248	1e-65
2	R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4	246	5e-65
3	R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2	246	5e-65
4	R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1	243	4e-64
5	RL13A_LUPLU (O49885) 60S ribosomal protein L13a	237	2e-62
6	RL13A_PICMA (O65055) 60S ribosomal protein L13a	233	2e-61
7	RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a	185	1e-46
8	RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a	183	3e-46
9	RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly b...	183	4e-46
10	RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a	182	7e-46
11	RL13A_RAT (P35427) 60S ribosomal protein L13a	179	4e-45
12	RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation...	178	1e-44
13	RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation...	176	5e-44
14	RL13A_CYAPA (P93099) 60S ribosomal protein L13a	174	1e-43
15	RL16_NEUCR (Q9P720) 60S ribosomal protein L16	153	3e-37
16	RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A	149	5e-36
17	RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A	149	8e-36
18	RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A	146	4e-35
19	RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)	144	3e-34
20	RL16B_SCHPO (O42991) 60S ribosomal protein L16-B	142	6e-34
21	RL13A_CAEEL (Q27389) 60S ribosomal protein L13a	142	1e-33
22	RL16A_SCHPO (O42848) 60S ribosomal protein L16-A	142	1e-33
23	RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)	142	1e-33
24	RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)	139	6e-33
25	RL16C_SCHPO (O43004) 60S ribosomal protein L16-C	138	1e-32
26	RL13_ARCFU (O29137) 50S ribosomal protein L13P	58	2e-08
27	RL13_PYRHO (O59300) 50S ribosomal protein L13P	57	5e-08
28	RL13_PYRAB (Q9V196) 50S ribosomal protein L13P	56	7e-08
29	RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50...	55	2e-07
30	RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)	49	9e-06
31	RL13_AERPE (Q9YB50) 50S ribosomal protein L13P	48	2e-05
32	RL13_SULSO (P95991) 50S ribosomal protein L13P	47	4e-05
33	RL13_METJA (P54023) 50S ribosomal protein L13P	46	7e-05
34	RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P	45	2e-04
35	RL13_SULAC (P39473) 50S ribosomal protein L13P	40	0.005
36	MAFB_HUMAN (Q9Y5Q3) Transcription factor MafB (V-maf musculoapon...	32	1.1
37	RL13_HELPY (P56038) 50S ribosomal protein L13	32	1.9
38	EMID2_MOUSE (Q91VF6) Collagen alpha-1(XXVI) chain precursor (EMI...	31	2.4
39	MAFB_RAT (P54842) Transcription factor MafB (V-maf musculoaponeu...	31	2.4
40	VNUA_PRVKA (P33485) Probable nuclear antigen	31	2.4
41	MAFB_MOUSE (P54841) Transcription factor MafB (V-maf musculoapon...	31	3.2
42	GLYA_HALSA (Q9HPY5) Serine hydroxymethyltransferase (EC 2.1.2.1)...	30	4.2
43	GLYA_HALMA (Q5V3D7) Serine hydroxymethyltransferase (EC 2.1.2.1)...	30	4.2
44	RK13_PORPU (P51292) Chloroplast 50S ribosomal protein L13	30	4.2
45	NAT_MYCSM (O86309) Arylamine N-acetyltransferase (EC 2.3.1.5)	30	4.2
46	RL13_HELPJ (Q9ZMY6) 50S ribosomal protein L13	30	5.4
47	BCSC4_ACEXY (Q9WX71) Cellulose synthase 2 operon protein C precu...	30	5.4
48	ENG2_YEAST (Q12168) Endo-1,3(4)-beta-glucanase 2 (EC 3.2.1.6) (E...	30	5.4
49	GLYA_NATPD (Q3IRX5) Serine hydroxymethyltransferase (EC 2.1.2.1)...	30	7.1
50	S13A3_MOUSE (Q91Y63) Solute carrier family 13 member 3 (Sodium-d...	30	7.1
51	NOP14_HUMAN (P78316) Probable nucleolar complex protein 14	29	9.3
52	INVO_PIG (P18175) Involucrin	29	9.3
53	RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding sub...	29	9.3
54	HSLU_RALSO (Q8Y3D8) ATP-dependent hsl protease ATP-binding subun...	29	9.3

>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3|
          Length = 206

 Score =  248 bits (633), Expect = 1e-65
 Identities = 119/157 (75%), Positives = 129/157 (82%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G  VRQKMKY+RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKT RG AALARLK 
Sbjct: 50  GGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV 109

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           FEG+PPPYD+ KRMVIPDALKVLRLQ GHKYCLLG LS EVGWN++              
Sbjct: 110 FEGIPPPYDKIKRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERS 169

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIKY 475
            V Y+R+KQL KLR KAEK AEE+LGSQLD+LAP+KY
Sbjct: 170 QVMYERKKQLNKLRTKAEKVAEERLGSQLDVLAPVKY 206

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>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4|
          Length = 206

 Score =  246 bits (627), Expect = 5e-65
 Identities = 120/157 (76%), Positives = 129/157 (82%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G  VRQKMKY+RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKT RG AALARLK 
Sbjct: 50  GGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV 109

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           +EGVP PYD+ KRMVIPDALKVLRLQ GHKYCLLG LS EVGWN++              
Sbjct: 110 YEGVPTPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERA 169

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIKY 475
            V Y+R+KQL KLRVKAEK AEEKLG+QLDILAP+KY
Sbjct: 170 HVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY 206

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>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2|
          Length = 206

 Score =  246 bits (627), Expect = 5e-65
 Identities = 120/157 (76%), Positives = 127/157 (80%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G  VRQKMKY+RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKT RG AALARLK 
Sbjct: 50  GGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV 109

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           FEGVPPPYD+ KRMVIPDALKVLRLQ GHKYCLLG LS EVGWN++              
Sbjct: 110 FEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERS 169

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIKY 475
              Y+R+KQL KLR KAEK AEEKLGSQLD+LA IKY
Sbjct: 170 QALYERKKQLTKLRAKAEKVAEEKLGSQLDVLASIKY 206

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>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1|
          Length = 206

 Score =  243 bits (619), Expect = 4e-64
 Identities = 117/157 (74%), Positives = 127/157 (80%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G  VRQKMKY+RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKT RG  ALARLK 
Sbjct: 50  GGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKV 109

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           FEGVP PYD+ KRMV+PDALKVLRLQ GHKYCLLG LS EVGWN++              
Sbjct: 110 FEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERA 169

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIKY 475
              Y+R+KQL+KLR KAEK AEEKLGSQLD+LAP+KY
Sbjct: 170 QAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY 206

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>RL13A_LUPLU (O49885) 60S ribosomal protein L13a|
          Length = 205

 Score =  237 bits (605), Expect = 2e-62
 Identities = 116/157 (73%), Positives = 129/157 (82%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G  VRQKMKYLRFLRKRMNTKPSHGPIH  APSKIFWRTVRGMIPHKT RGE ALARLK 
Sbjct: 50  GGLVRQKMKYLRFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKV 108

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           +EG+PPP+D+ KR+V+PDALKVLRLQ GHKYCLLG+LS EVGWNY+              
Sbjct: 109 YEGIPPPFDKQKRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERS 168

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIKY 475
            V Y+R+KQL KLRVKAE+ A+EKLGSQLDILAP+KY
Sbjct: 169 QVVYERKKQLNKLRVKAEQVAQEKLGSQLDILAPVKY 205

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>RL13A_PICMA (O65055) 60S ribosomal protein L13a|
          Length = 206

 Score =  233 bits (595), Expect = 2e-61
 Identities = 113/157 (71%), Positives = 127/157 (80%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G  VRQKMKYLRFLRKRMNTKPSHGPIHFRAPS+I WRT+RGMIPHKT RG AALA L+A
Sbjct: 50  GGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRA 109

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           FEGVPPPYDR KRMVIPDALKVLRLQPGHKYCLLG LSKEVGW++               
Sbjct: 110 FEGVPPPYDRKKRMVIPDALKVLRLQPGHKYCLLGRLSKEVGWHHFDTITELEEKRKAKA 169

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAPIKY 475
            VSY+RRKQLAKLR KA + AE++L  ++++LA +KY
Sbjct: 170 QVSYERRKQLAKLRSKAVELAEKQLAPEMELLASLKY 206

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>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a|
          Length = 202

 Score =  185 bits (469), Expect = 1e-46
 Identities = 86/152 (56%), Positives = 107/152 (70%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RLK 
Sbjct: 44  GNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKV 103

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           F+G+PPPYD+ KRMV+P ALKV+RL+P  K+  LG L+ EVGW Y               
Sbjct: 104 FDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 163

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 460
            + Y ++KQL +LR +AEK  E+K+G   ++L
Sbjct: 164 KIHYRKKKQLMRLRKQAEKNIEKKIGKFTEVL 195

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>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a|
          Length = 202

 Score =  183 bits (465), Expect = 3e-46
 Identities = 85/152 (55%), Positives = 106/152 (69%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RLK 
Sbjct: 44  GNFYRNKLKYLAFLRKRMNTSPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKV 103

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           F+G+PPPYD+ KRMV+P ALKV+RL+P  K+  LG L+ EVGW Y               
Sbjct: 104 FDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 163

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 460
            + Y ++KQL +LR +AEK  E+K+    ++L
Sbjct: 164 KIHYRKKKQLVRLRKQAEKNVEKKIDKYTEVL 195

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>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)|
          Length = 202

 Score =  183 bits (464), Expect = 4e-46
 Identities = 85/152 (55%), Positives = 106/152 (69%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RLK 
Sbjct: 44  GNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKV 103

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           F+G+PPPYD+ KRMV+P ALKV+RL+P  K+  LG L+ EVGW Y               
Sbjct: 104 FDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 163

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 460
            + Y ++KQL +LR +AEK  E+K+    ++L
Sbjct: 164 KIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVL 195

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>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a|
          Length = 202

 Score =  182 bits (462), Expect = 7e-46
 Identities = 85/152 (55%), Positives = 105/152 (69%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RLK 
Sbjct: 44  GNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKV 103

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           F+G+PPPYD+ KRMV+P ALKV+RL+P  K+  LG L+ EVGW Y               
Sbjct: 104 FDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTTTLEEKRKEKA 163

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 460
            + Y ++KQL +LR +AEK  E+K+     +L
Sbjct: 164 KIHYRKKKQLMRLRKQAEKNVEKKIDKYTQVL 195

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>RL13A_RAT (P35427) 60S ribosomal protein L13a|
          Length = 202

 Score =  179 bits (455), Expect = 4e-45
 Identities = 84/152 (55%), Positives = 105/152 (69%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RLK 
Sbjct: 44  GNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKV 103

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
            +G+PPPYD+ KRMV+P ALKV+RL+P  K+  LG L+ EVGW Y               
Sbjct: 104 LDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 163

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 460
            + Y ++KQL +LR +AEK  E+K+    ++L
Sbjct: 164 KIHYRKKKQLLRLRKQAEKNVEKKICKFTEVL 195

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>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)|
           (Tum-P198 antigen)
          Length = 202

 Score =  178 bits (451), Expect = 1e-44
 Identities = 83/152 (54%), Positives = 105/152 (69%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RLK 
Sbjct: 44  GNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKV 103

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
            +G+PPPYD+ KRMV+P ALKV+RL+P  K+  LG L+ EVGW Y               
Sbjct: 104 LDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 163

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 460
            + Y ++KQ+ +LR +AEK  E+K+    ++L
Sbjct: 164 KMHYRKKKQILRLRKQAEKNVEKKICKFTEVL 195

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>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198|
           homolog) (Fragment)
          Length = 189

 Score =  176 bits (446), Expect = 5e-44
 Identities = 83/152 (54%), Positives = 101/152 (66%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RLK 
Sbjct: 31  GNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKV 90

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           F+GVPPPYD+ KRMV+P ALK++RL+P  K+ LLG L+ EVGW Y               
Sbjct: 91  FDGVPPPYDKRKRMVVPAALKIVRLKPTRKFALLGRLAHEVGWKYQAITATLEEKRKEKA 150

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEKLGSQLDIL 460
            + Y ++K + KL   AEK  E  +     +L
Sbjct: 151 KIRYAKKKTVTKLSKLAEKNVESTISKYTAVL 182

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>RL13A_CYAPA (P93099) 60S ribosomal protein L13a|
          Length = 200

 Score =  174 bits (442), Expect = 1e-43
 Identities = 82/144 (56%), Positives = 98/144 (68%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G+  R K+K+  FL+KRMNT P  GP HFR+P++I WRT+RGMIPHKTPRG AAL RLKA
Sbjct: 44  GSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKA 103

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           FEGVPPPYD+ KRMVIP AL+VLRL+PG K+C+LG L+ EVGW +               
Sbjct: 104 FEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRKTKS 163

Query: 365 XVSYDRRKQLAKLRVKAEKAAEEK 436
              Y R+K L  LR KA  A   K
Sbjct: 164 AAFYARKKTLVNLRAKAAVAVASK 187

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>RL16_NEUCR (Q9P720) 60S ribosomal protein L16|
          Length = 202

 Score =  153 bits (387), Expect = 3e-37
 Identities = 75/143 (52%), Positives = 94/143 (65%), Gaps = 1/143 (0%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHG-PIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLK 181
           G   R K+KY  +LRK     P+ G P HFRAPS+IF++ VRGMIPHKT RG AAL RLK
Sbjct: 46  GEFFRAKLKYHSYLRKMTRYNPTRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLK 105

Query: 182 AFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXX 361
            FEGVPPPYD+ K+MV+P AL+VLRLQPG K+C +G LS EVGW Y              
Sbjct: 106 VFEGVPPPYDKKKKMVVPQALRVLRLQPGRKFCTVGRLSSEVGWKYEDVVSRLEERRKAK 165

Query: 362 XXVSYDRRKQLAKLRVKAEKAAE 430
               Y+R+K  A+   +A+K+A+
Sbjct: 166 GAAYYERKKVAARQLSEAKKSAK 188

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>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A|
          Length = 205

 Score =  149 bits (377), Expect = 5e-36
 Identities = 72/142 (50%), Positives = 95/142 (66%), Gaps = 4/142 (2%)
 Frame = +2

Query: 17  RQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGV 196
           R K+K+L +LRKR N  P+ GP HFRAPS+IF++ VRGMIPHKT RG+AALARL+ F+G+
Sbjct: 51  RNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGI 110

Query: 197 PPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXXXVSY 376
           P PYD+ +R+V+P A++VL L+   KYC +G LS EVGW+Y                V+ 
Sbjct: 111 PSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTL 170

Query: 377 DRRKQLAKLRVKAE----KAAE 430
              ++L KL VKA     KAAE
Sbjct: 171 KHNRELKKLTVKARENIAKAAE 192

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>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A|
          Length = 204

 Score =  149 bits (375), Expect = 8e-36
 Identities = 65/105 (61%), Positives = 81/105 (77%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+K++ FLRKR N  P+ GP HFRAPSKI W+TVRGMIPHKT RG++AL RL+A
Sbjct: 47  GNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRA 106

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNY 319
           ++G PPPYD  +R+V+P AL+V  L+PG KYC +G LS EVGW Y
Sbjct: 107 YDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGWKY 151

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>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A|
          Length = 204

 Score =  146 bits (369), Expect = 4e-35
 Identities = 64/105 (60%), Positives = 80/105 (76%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+K++ FLRKR N  P+ GP HFRAPSKI W+TVRGMIPHKT RG+ AL RL++
Sbjct: 47  GNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRS 106

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNY 319
           ++G PPPYD  +R+V+P AL+V  L+PG KYC +G LS EVGW Y
Sbjct: 107 YDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGWKY 151

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>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)|
          Length = 137

 Score =  144 bits (362), Expect = 3e-34
 Identities = 67/97 (69%), Positives = 78/97 (80%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KYL FLRKRMNT PS GP HFRAPS+IFWRTVRGM+PHKT RG+AAL RLK 
Sbjct: 41  GNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKV 100

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGEL 295
           F+G+PPPYD+ KRMV+P ALKV+RL+   K+  LG L
Sbjct: 101 FDGIPPPYDKKKRMVVPAALKVVRLKLTGKFXYLGRL 137

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>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B|
          Length = 197

 Score =  142 bits (359), Expect = 6e-34
 Identities = 70/143 (48%), Positives = 93/143 (65%)
 Frame = +2

Query: 17  RQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGV 196
           R K+KYL +LRK     PS G  HFRAPS+IF + VRGM+PHKT RG+AAL  L+A EG+
Sbjct: 50  RNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGI 109

Query: 197 PPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXXXVSY 376
           PPP+D+ KR+V+P AL+VLRL+PG KYC +G LS EVGW Y+                  
Sbjct: 110 PPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYNDIVAKLE----------- 158

Query: 377 DRRKQLAKLRVKAEKAAEEKLGS 445
           +RRK  +    +A+ A ++K+ S
Sbjct: 159 ERRKVKSAAFYQAKLAKQKKIAS 181

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>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a|
          Length = 202

 Score =  142 bits (357), Expect = 1e-33
 Identities = 68/153 (44%), Positives = 93/153 (60%)
 Frame = +2

Query: 17  RQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGV 196
           R K+KY+ FLRKR N  P+ G  H+RAP KIFWRTVRGM+PHKT RG  AL  L+A+EGV
Sbjct: 50  RSKLKYMSFLRKRCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGV 109

Query: 197 PPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXXXVSY 376
           P  Y +TK +  P A +  RLQP  K+C++G LS EVGW +                  +
Sbjct: 110 PAKYQKTKSLHAPSASR-FRLQPRRKFCVVGRLSHEVGWQFQDVVAKLEAKRKVKGAAYF 168

Query: 377 DRRKQLAKLRVKAEKAAEEKLGSQLDILAPIKY 475
           +++K++ KL V+A+K A  K+     I+  + Y
Sbjct: 169 EQKKKMDKLAVQAKKNAAPKIAQYQKIIEALGY 201

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>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A|
          Length = 197

 Score =  142 bits (357), Expect = 1e-33
 Identities = 63/101 (62%), Positives = 78/101 (77%)
 Frame = +2

Query: 17  RQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGV 196
           R K+KYL +LRK     PS G  HFRAPS+IF + VRGM+PHKT RG+AAL  L+A EG+
Sbjct: 50  RNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGI 109

Query: 197 PPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNY 319
           PPP+D+ KR+V+P AL+VLRL+PG KYC +G LS EVGW Y
Sbjct: 110 PPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKY 150

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>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)|
          Length = 198

 Score =  142 bits (357), Expect = 1e-33
 Identities = 72/153 (47%), Positives = 91/153 (59%), Gaps = 1/153 (0%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KY  FLRK      + GP HFRAPS+IF++ +RGM+ HKT RG+AAL RLK 
Sbjct: 44  GEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKV 103

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           FEG+PPPYD+ KR+V+P AL+VLRL+PG KY  LG+LS  VGW Y               
Sbjct: 104 FEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEAKRKVSS 163

Query: 365 XVSYDRRKQLAKLRVKAE-KAAEEKLGSQLDIL 460
              Y +++   K    A   AAE  +  QL  L
Sbjct: 164 AEYYAKKRAFTKKVASANATAAESDVAKQLAAL 196

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>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)|
          Length = 197

 Score =  139 bits (350), Expect = 6e-33
 Identities = 68/143 (47%), Positives = 86/143 (60%)
 Frame = +2

Query: 5   GTRVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKA 184
           G   R K+KY  FLRK      + GP HFRAPS+I ++ +RGM+ HKT RG+AAL RLK 
Sbjct: 43  GEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKI 102

Query: 185 FEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNYHXXXXXXXXXXXXXX 364
           FEG+PPPYD+ KR+V+P AL+VLRL+PG KY  LG+LS  VGW Y               
Sbjct: 103 FEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEDKRKVRS 162

Query: 365 XVSYDRRKQLAKLRVKAEKAAEE 433
              Y +++   K    A  AA E
Sbjct: 163 AEYYAKKRAFTKKVSSASAAASE 185

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>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C|
          Length = 197

 Score =  138 bits (347), Expect = 1e-32
 Identities = 61/101 (60%), Positives = 75/101 (74%)
 Frame = +2

Query: 17  RQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGV 196
           R K+KYL +LRK     PS G  HFRAPS+IF + VRGM+PHKT RG  AL  L+A EG+
Sbjct: 50  RNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGI 109

Query: 197 PPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNY 319
           PPP+D+ KR+V+P AL+VLRL+P  KYC +G LS EVGW Y
Sbjct: 110 PPPFDKQKRLVVPAALRVLRLKPSRKYCTIGRLSSEVGWKY 150

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>RL13_ARCFU (O29137) 50S ribosomal protein L13P|
          Length = 156

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 36/96 (37%), Positives = 50/96 (52%)
 Frame = +2

Query: 26  MKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPP 205
           M + R+  K        GP   R P +IF RTVRGM+P K+ RG  A  RL+ F GVP  
Sbjct: 59  MVFERYKEKYDRGSKEKGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVPEE 118

Query: 206 YDRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGW 313
               +   I DAL + ++    KY  L E+S+ +G+
Sbjct: 119 LQGREFEKIEDAL-LEKVSKTDKYVTLAEVSRYLGF 153

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>RL13_PYRHO (O59300) 50S ribosomal protein L13P|
          Length = 142

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 35/97 (36%), Positives = 51/97 (52%)
 Frame = +2

Query: 29  KYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 208
           KY +    R  T P  GP + +   +I  RT+RGM+P KT RG  A  RLK + G+P  +
Sbjct: 48  KYKQRTGLRTLTNPRRGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEF 107

Query: 209 DRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNY 319
              +   I +A  V RL    KY  +GE++K +G  +
Sbjct: 108 QDKQLETIVEA-HVSRLS-RPKYVTVGEVAKFLGGKF 142

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>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P|
          Length = 142

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 35/97 (36%), Positives = 51/97 (52%)
 Frame = +2

Query: 29  KYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 208
           KY +    R  T P  GP + +   +I  RT+RGM+P KT RG  A  RLK + G+P  +
Sbjct: 48  KYKQRTGLRTLTNPRRGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEF 107

Query: 209 DRTKRMVIPDALKVLRLQPGHKYCLLGELSKEVGWNY 319
              +   I +A  V RL    KY  +GE++K +G  +
Sbjct: 108 KDKQLETIVEA-HVSRLS-RPKYVTVGEVAKFLGGKF 142

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>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal|
           protein L13P; 30S ribosomal protein S9P]
          Length = 282

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = +2

Query: 77  GPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLR 256
           GP + R P  IF RTVRGM+P+K  +G  A   LKA+ G+P  +   + + IPDA K   
Sbjct: 67  GPKYPRRPDDIFRRTVRGMLPYKKSKGREAFKGLKAYVGIPREFKDEEMVEIPDA-KAGS 125

Query: 257 LQPGHKYCLLGELSKEVG 310
           ++ G +   LGE+S+ +G
Sbjct: 126 IKKGME---LGEISELLG 140

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>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)|
          Length = 145

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 31/89 (34%), Positives = 48/89 (53%)
 Frame = +2

Query: 50  KRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMV 229
           KR++    +G  + + P  IF RT+RGM+PHK  RG  A   ++ + G   PYD    ++
Sbjct: 59  KRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYDEDGEVL 116

Query: 230 IPDALKVLRLQPGHKYCLLGELSKEVGWN 316
             D   + RL    K+  LGE+S+ +G N
Sbjct: 117 --DGTSLDRLS-NIKFVTLGEISETLGAN 142

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>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P|
          Length = 155

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/74 (36%), Positives = 40/74 (54%)
 Frame = +2

Query: 92  RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGH 271
           R P ++F   VRGM+P    RG  ALARL+ + GVP      + +  P+A    RL    
Sbjct: 79  RTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGREFVRFPEA-DASRL--SS 135

Query: 272 KYCLLGELSKEVGW 313
            Y  LG +++++GW
Sbjct: 136 HYIELGAVARQLGW 149

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>RL13_SULSO (P95991) 50S ribosomal protein L13P|
          Length = 149

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 28/75 (37%), Positives = 45/75 (60%)
 Frame = +2

Query: 92  RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGH 271
           R+P  I  RT+RGM+P K+ +G   L  +K + GVP  ++  + +  PD+  V RL+   
Sbjct: 78  RSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDS-DVSRLK--G 133

Query: 272 KYCLLGELSKEVGWN 316
           KY  +  +SKE+GW+
Sbjct: 134 KYVTVEVVSKELGWS 148

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>RL13_METJA (P54023) 50S ribosomal protein L13P|
          Length = 137

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 29/88 (32%), Positives = 42/88 (47%)
 Frame = +2

Query: 47  RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRM 226
           +K +      GP   R P  I  RT+R M+P+K P+G  A  R+K + G P      K +
Sbjct: 55  KKNVANPRRFGPKFPRRPDDILRRTIRKMLPYKKPKGREAFKRVKVYVGNP------KNL 108

Query: 227 VIPDALKVLRLQPGHKYCLLGELSKEVG 310
            + +  K+       KY  L ELSK +G
Sbjct: 109 TVDE--KISHKLNTTKYITLAELSKHLG 134

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>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P|
          Length = 145

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 29/90 (32%), Positives = 44/90 (48%)
 Frame = +2

Query: 47  RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRM 226
           R R N     GP + + P  IF R +RGM+P+K   G  AL  ++ + G P   D     
Sbjct: 58  RTRANLGSDRGPYYPKRPDGIFKRAIRGMLPYKQDDGREALDSVRVYVGNPMDEDGD--- 114

Query: 227 VIPDALKVLRLQPGHKYCLLGELSKEVGWN 316
            + D   + RL    ++  L E+S+E+G N
Sbjct: 115 -VLDGTSLDRLST-IRFVTLSEVSEELGAN 142

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>RL13_SULAC (P39473) 50S ribosomal protein L13P|
          Length = 148

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 34/92 (36%), Positives = 44/92 (47%)
 Frame = +2

Query: 35  LRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDR 214
           L F  K M      G    R P  I  RTVRGM+P K   G+     LKA+ G+P   + 
Sbjct: 57  LLFTVKTMQNPYRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIPKELE- 114

Query: 215 TKRMVIPDALKVLRLQPGHKYCLLGELSKEVG 310
            K M+  D   V RL+   KY  + ELS+ +G
Sbjct: 115 GKSMIRFDDADVSRLK--GKYITVAELSRLLG 144

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>MAFB_HUMAN (Q9Y5Q3) Transcription factor MafB (V-maf musculoaponeurotic|
           fibrosarcoma oncogene homolog B)
          Length = 323

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
 Frame = +1

Query: 55  DEHQAVARSHPLPRPLENFLAHRARH--------DPAQDAPRRGCARQAEGVRGRPAAL* 210
           D  +A+  SHP+P+PL++F + R  H         P    P  G A    G    P    
Sbjct: 106 DAVEALIGSHPVPQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHP---- 161

Query: 211 SHQAYGHPRRAQGSEAAAGS*VLPS 285
            H  + H      S AA+ +  LP+
Sbjct: 162 -HHHHHHQASPPPSSAASPAQQLPT 185

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>RL13_HELPY (P56038) 50S ribosomal protein L13|
          Length = 141

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 92  RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 208
           +AP K++   VRGM+P KT  G+A + +LK +     P+
Sbjct: 94  KAPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131

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>EMID2_MOUSE (Q91VF6) Collagen alpha-1(XXVI) chain precursor (EMI|
           domain-containing protein 2) (Emu2 protein) (Emilin and
           multimerin domain-containing protein 2)
          Length = 440

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
 Frame = -1

Query: 204 GGGTPSNAFSL----ASAASPRGVLCGIM--PRTVRQKIFEGARKWMGPCDGLVFIRLRR 43
           G G+P N +S           R V C +     TV Q++++  R W GPC  LV  R   
Sbjct: 41  GAGSPGNGYSSRRHWCHHTVTRTVSCQVQNGSETVVQRVYQSCR-WPGPCANLVSYRTLI 99

Query: 42  KRRYFIF*RTL 10
           +  Y +  RT+
Sbjct: 100 RPTYRVSYRTV 110

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>MAFB_RAT (P54842) Transcription factor MafB (V-maf musculoaponeurotic|
           fibrosarcoma oncogene homolog B) (Transcription factor
           MAF1)
          Length = 323

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
 Frame = +1

Query: 55  DEHQAVARSHPLPRPLENFLAHRARH--------DPAQDAPRRGCARQAEGVRGRPAAL* 210
           D  +A+  SHP+P+PL++F   R+ H         P    P  G      G    P    
Sbjct: 106 DAVEALIGSHPVPQPLQSFDGFRSAHHHHHHHHPHPHHGYPGAGVTHDELGPHAHP---- 161

Query: 211 SHQAYGHPRRAQGSEAAAGS*VLPS 285
            H  + H      S AA+ +  LP+
Sbjct: 162 -HHHHHHQASPPPSSAASPAQQLPT 185

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 27/85 (31%), Positives = 32/85 (37%)
 Frame = +1

Query: 10  EGPSEDEVPPLPPQADEHQAVARSHPLPRPLENFLAHRARHDPAQDAPRRGCARQAEGVR 189
           EG  +D  PP PP              PRP            P Q  P  G AR+     
Sbjct: 265 EGDRDDPPPPSPP--------------PRPPPPLPPPPPPPPPPQPPPAGGSARRRRR-G 309

Query: 190 GRPAAL*SHQAYGHPRRAQGSEAAA 264
           G P      +  G  RRA+G+EAAA
Sbjct: 310 GGPPGRGGRRRGGKRRRAEGTEAAA 334

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>MAFB_MOUSE (P54841) Transcription factor MafB (V-maf musculoaponeurotic|
           fibrosarcoma oncogene homolog B) (Transcription factor
           MAF1) (Segmentation protein KR) (Kreisler)
          Length = 323

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
 Frame = +1

Query: 55  DEHQAVARSHPLPRPLENFLAHRARH--------DPAQDAPRRGCARQAEGVRGRPAAL* 210
           D  +A+  SHP+P+PL++F   R+ H         P    P  G      G    P    
Sbjct: 106 DAVEALIGSHPVPQPLQSFDGFRSAHHHHHHHHPHPHHGYPGAGVTHDDLGQHAHP---- 161

Query: 211 SHQAYGHPRRAQGSEAAAGS*VLPS 285
            H  + H      S AA+ +  LP+
Sbjct: 162 -HHHHHHQASPPPSSAASPAQQLPT 185

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>GLYA_HALSA (Q9HPY5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 415

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = -3

Query: 181 LQPGERSLAAGRLVRDHAAHGAPENFRGGA------EVDGTVRRLGVHPLAEEAE 35
           L PG++ L+       H +HG P NF G        EVD    RL    L E A+
Sbjct: 108 LAPGDKILSLDLTHGGHLSHGHPANFAGQLYEVEQYEVDAETGRLDYEALREHAD 162

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>GLYA_HALMA (Q5V3D7) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 415

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
 Frame = -3

Query: 181 LQPGERSLAAGRLVRDHAAHGAPENFRGGA---------EVDGTVRRLGVHPLAEEAE 35
           L+PG++ L+       H +HG P NF G           E  G V   G+H  AEE E
Sbjct: 108 LEPGDKILSLDLTHGGHLSHGHPANFAGQVYEVEQYKVDEETGYVDYEGLHDHAEEFE 165

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>RK13_PORPU (P51292) Chloroplast 50S ribosomal protein L13|
          Length = 142

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 92  RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTK 220
           R P++I  ++V+GM+P K P G     +LK + G   P+   K
Sbjct: 95  RLPNRIVEKSVKGMLP-KGPLGRKLFTKLKVYPGPSHPHAAQK 136

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>NAT_MYCSM (O86309) Arylamine N-acetyltransferase (EC 2.3.1.5)|
          Length = 275

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 295 KLAEKAVLMTRLQPQNLERVGDDHTLGAIIR 203
           +L    V  TR +P  L R GDDHTL A +R
Sbjct: 140 RLEAGPVQQTRHEPYRLTRHGDDHTLAAQVR 170

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>RL13_HELPJ (Q9ZMY6) 50S ribosomal protein L13|
          Length = 141

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 92  RAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 208
           + P K++   VRGM+P KT  G+A + +LK +     P+
Sbjct: 94  KTPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131

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>BCSC4_ACEXY (Q9WX71) Cellulose synthase 2 operon protein C precursor|
          Length = 1307

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
 Frame = -3

Query: 307 DLLGKLAEKAVLMTR-----LQPQNLERVGDDHTLGAIIRRRDALERLQPGERSLAAGRL 143
           D+L +L   A  M R     +     +R GDD    A++RR  AL+   P  R   A  L
Sbjct: 513 DILTRLQRLAPAMARRLEAMMLSAQADRAGDDDGRIALLRRAQALDPDDPWVRLKLAHAL 572

Query: 142 --VRDHAAH-------GAPENFRGGAEVDGTVRRLGVHPLAEEAEVL 29
               DHAA         AP N    A   G +  +G H  A    +L
Sbjct: 573 DDAGDHAAAQAMMDALTAPRNASAQALQAGIIYAMGRHDTATAGALL 619

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>ENG2_YEAST (Q12168) Endo-1,3(4)-beta-glucanase 2 (EC 3.2.1.6)|
           (Endo-1,4-beta-glucanase 2) (Endo-1,3-beta-glucanase 2)
           (Laminarinase-2)
          Length = 779

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 4   RHEGPSEDEVPPLPPQADEHQAVARSHPLPRPLENFLAHRARHDPAQDAP 153
           R  G +    PPLPP+A+    V  S    +P EN +A  +   P+   P
Sbjct: 15  RPGGTTNRGPPPLPPRANVQPPVCSSENSSKPRENRVAGESLRTPSSSNP 64

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>GLYA_NATPD (Q3IRX5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 424

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = -3

Query: 190 LERLQPGERSLAAGRLVRDHAAHGAPENFRGGA------EVDGTVRRLGVHPLAEEAE 35
           L  L+PG+R L+       H +HG P NF G        EVD     +    L E+AE
Sbjct: 105 LAMLEPGDRILSLELEHGGHLSHGHPANFTGQTYEVEQYEVDPETGYIDYDELHEQAE 162

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>S13A3_MOUSE (Q91Y63) Solute carrier family 13 member 3 (Sodium-dependent|
           high-affinity dicarboxylate transporter 2)
           (Na(+)/dicarboxylate cotransporter 3) (NaDC-3) (mNaDC3)
          Length = 600

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +2

Query: 383 RKQLAKLRVKAEKAAEEKLGSQLDILAPIKY*PAEQSCIVYFAG*WSLLFT 535
           RK+ +K+R  AE  A+  +  +   L PIK+  AEQ+  + F     LLF+
Sbjct: 308 RKKKSKIRADAEDQAKAVIQEEFQNLGPIKF--AEQAVFILFCTFAILLFS 356

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>NOP14_HUMAN (P78316) Probable nucleolar complex protein 14|
          Length = 857

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +2

Query: 113 WRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGE 292
           W+ ++ ++ HKTP+ E    R K  +  P  YD    M++ +    ++ QP ++     E
Sbjct: 225 WKEIQTLLSHKTPKSE---NRDKKEKPKPDAYD----MMVRELGFEMKAQPSNRMKTEAE 277

Query: 293 LSKE 304
           L+KE
Sbjct: 278 LAKE 281

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>INVO_PIG (P18175) Involucrin|
          Length = 347

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 19  SEDEVPPLPPQADEHQA-VARSHPLPRPLENFLAHRARHDPAQDAPR 156
           S++ + P+ P AD  Q  V ++ PLP P +  L+      P +DA +
Sbjct: 16  SQEPLKPVSPPADTQQEQVKQATPLPAPCQKMLSELPVEVPLEDAEK 62

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>RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (p70)
          Length = 616

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/68 (30%), Positives = 26/68 (38%)
 Frame = +3

Query: 237 TRSRF*GCSRVISTAFSASFPRRSGGTTMKLSXXXXXXXXXXXXSLTTGGSNWPSCASRL 416
           T S+  G S+    A   S    SGGT  K+             SLT   S W  CA   
Sbjct: 154 TVSKAYGASKTFGKAAGPSLSHNSGGTQSKV---------VPIASLTPYQSKWTICARVT 204

Query: 417 RRLQRRSW 440
            + Q R+W
Sbjct: 205 NKSQIRTW 212

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>HSLU_RALSO (Q8Y3D8) ATP-dependent hsl protease ATP-binding subunit hslU|
          Length = 443

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 368 VSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAP 466
           V   R  ++ K+R KAE AAE++L   LD+L P
Sbjct: 109 VKQTRESEMKKVRAKAEDAAEDRL---LDVLIP 138


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,981,393
Number of Sequences: 219361
Number of extensions: 1507624
Number of successful extensions: 5290
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 5026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5276
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result