Clone Name | bah63l18 |
---|---|
Clone Library Name | barley_pub |
>PSY_DAUCA (Q9SSU8) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 398 Score = 316 bits (810), Expect = 3e-86 Identities = 147/182 (80%), Positives = 166/182 (91%) Frame = +1 Query: 22 EQMEQEGDAELGWGLLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTD 201 ++ E + W LL +AYDRCGEVCAEYAKTFYLGT LMTPERR+AVWAIYVWCRRTD Sbjct: 92 DKSENDDAGMKSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTD 151 Query: 202 ELVDGPNASYITPKALDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGM 381 ELVDGPNAS+ITPKALDRWEKRL DLF+G+PYDMYDAAL+DT S +P+DIQPF+DMI+GM Sbjct: 152 ELVDGPNASHITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQPFKDMIDGM 211 Query: 382 RLDLWKSRYRTFDELYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQL 561 R+DL KSRY+TFDELYLYCYYVAGTVGLM+VPVMGIAP+SKA+ ESVY+AALALGIANQL Sbjct: 212 RMDLKKSRYQTFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQL 271 Query: 562 TN 567 TN Sbjct: 272 TN 273
>PSY2_LYCES (P37273) Phytoene synthase 2, chloroplast precursor (EC 2.5.1.-)| (Fragment) Length = 310 Score = 316 bits (810), Expect = 3e-86 Identities = 144/169 (85%), Positives = 160/169 (94%) Frame = +1 Query: 61 GLLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITP 240 GLL +AYDRCGEVCAEYAKTFYLGT LMTP+RR+A+WAIYVWCRRTDELVDGPNAS+ITP Sbjct: 11 GLLSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIYVWCRRTDELVDGPNASHITP 70 Query: 241 KALDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFD 420 +ALDRWE RLED+F GRP+DM DAALSDT S+FP+DIQPFRDM+EGMR+DLWKSRY FD Sbjct: 71 QALDRWEARLEDIFNGRPFDMLDAALSDTVSRFPVDIQPFRDMVEGMRMDLWKSRYNNFD 130 Query: 421 ELYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 ELYLYCYYVAGTVGLM+VP+MGIAP+SKA+ ESVYNAALALGIANQLTN Sbjct: 131 ELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTN 179
>PSY_CAPAN (P37272) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 419 Score = 313 bits (802), Expect = 2e-85 Identities = 147/169 (86%), Positives = 158/169 (93%) Frame = +1 Query: 61 GLLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITP 240 GLL +AYDRC EVCAEYAKTFYLGT LMTPERRKA+WAIYVWCRRTDELVDGPNAS+ITP Sbjct: 127 GLLSEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 186 Query: 241 KALDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFD 420 ALDRWE RLED+F GRP+DM DAALSDT SKFP+DIQPFRDMIEGMR+DL KSRYR FD Sbjct: 187 AALDRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNFD 246 Query: 421 ELYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 ELYLYCYYVAGTVGLM+VP+MGIAP+SKA+ ESVYNAALALGIANQLTN Sbjct: 247 ELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTN 295
>PSY1_LYCES (P08196) Phytoene synthase 1, chloroplast precursor (EC 2.5.1.-)| (Fruit ripening-specific protein pTOM5) Length = 412 Score = 308 bits (790), Expect = 5e-84 Identities = 144/169 (85%), Positives = 156/169 (92%) Frame = +1 Query: 61 GLLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITP 240 GLL +AYDRCGEVCAEYAKTF LGT LMTPERR+A+WAIYVWCRRTDELVDGPNASYITP Sbjct: 115 GLLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITP 174 Query: 241 KALDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFD 420 ALDRWE RLED+F GRP+DM D ALSDT S FP+DIQPFRDMIEGMR+DL KSRY+ FD Sbjct: 175 AALDRWENRLEDVFNGRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKNFD 234 Query: 421 ELYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 ELYLYCYYVAGTVGLM+VP+MGIAP+SKA+ ESVYNAALALGIANQLTN Sbjct: 235 ELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTN 283
>PSY_NARPS (P53797) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 423 Score = 306 bits (785), Expect = 2e-83 Identities = 145/168 (86%), Positives = 156/168 (92%) Frame = +1 Query: 64 LLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPK 243 LL DAYDRCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDG NAS+ITP Sbjct: 124 LLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPS 183 Query: 244 ALDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDE 423 ALDRWE RLEDLF GRPYDM+DAALSDT S+FP+DIQPF DM+EGMR+DL KSRY+ FDE Sbjct: 184 ALDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDE 243 Query: 424 LYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 LYLYCYYVAGTVGLM+VPVMGIAP+S A AESVYNAALALGIANQLTN Sbjct: 244 LYLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTN 291
>PSY_ARATH (P37271) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 422 Score = 305 bits (782), Expect = 4e-83 Identities = 143/168 (85%), Positives = 157/168 (93%) Frame = +1 Query: 64 LLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPK 243 LLG+AYDRCGEVCAEYAKTFYLGT LMTPERRKA+WAIYVWCRRTDELVDGPNAS+ITP Sbjct: 127 LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPM 186 Query: 244 ALDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDE 423 ALDRWE RLEDLF GRP+DM DAAL+DT +++P+DIQPFRDMIEGMR+DL KSRY+ FD+ Sbjct: 187 ALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDD 246 Query: 424 LYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 LYLYCYYVAGTVGLM+VPVMGI P SKA+ ESVYNAALALGIANQLTN Sbjct: 247 LYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTN 294
>PSY_CUCME (P49293) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| (MEL5) Length = 422 Score = 301 bits (772), Expect = 6e-82 Identities = 140/165 (84%), Positives = 156/165 (94%) Frame = +1 Query: 64 LLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPK 243 LL +AYDRCGEVCAEYAKTFYLGT LMTPER+KA+WAIYVWCRRTDELVDGPNAS+ITP Sbjct: 132 LLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPT 191 Query: 244 ALDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDE 423 ALDRWE RLE+LF+GRP+DM DAAL+DT +KFP+DIQPF+DMIEGMR+DL KSRY+ FDE Sbjct: 192 ALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDE 251 Query: 424 LYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQ 558 LYLYCYYVAGTVGLM+VPVMGIAP+S+AS ESVYNAALALGIANQ Sbjct: 252 LYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQ 296
>PSY_MAIZE (P49085) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 410 Score = 298 bits (764), Expect = 5e-81 Identities = 141/167 (84%), Positives = 153/167 (91%) Frame = +1 Query: 67 LGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKA 246 L +AYDRCGE+C EYAKTFYLGT LMT ERR+A+WAIYVWCRRTDELVDGPNA+YITP A Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174 Query: 247 LDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDEL 426 LDRWEKRLEDLF GRPYDM DAALSDT S+FPIDIQPFRDMIEGMR DL K+RY FDEL Sbjct: 175 LDRWEKRLEDLFTGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNFDEL 234 Query: 427 YLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 Y+YCYYVAGTVGLM+VPVMGIA +SKA+ ESVY+AALALGIANQLTN Sbjct: 235 YMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTN 281
>CRTB_SYNY3 (P37294) Phytoene synthase (EC 2.5.1.-)| Length = 337 Score = 212 bits (539), Expect = 7e-55 Identities = 102/171 (59%), Positives = 127/171 (74%), Gaps = 6/171 (3%) Frame = +1 Query: 73 DAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALD 252 +AY+ C +V A+YAKTFYLGT LM P +R+A+WAIY+WCRRTDELVDGP A+ TP+ LD Sbjct: 47 EAYEICRQVTAQYAKTFYLGTLLMPPAKRRAIWAIYLWCRRTDELVDGPQAATTTPETLD 106 Query: 253 RWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYL 432 WE+RLE +F G+P D D AL DT FP+DIQPFRDMI G R+DL++SRY+TF+EL L Sbjct: 107 HWERRLEGIFAGQPQDDADVALVDTLETFPLDIQPFRDMIAGQRMDLYRSRYQTFEELDL 166 Query: 433 YCYYVAGTVGLMTVPVMGI------APDSKASAESVYNAALALGIANQLTN 567 YCY VAGTVGLM+ V+G+ AP + A+ALG+ANQLTN Sbjct: 167 YCYRVAGTVGLMSSAVLGVDTGNGQAPWQPDAVYIPQEEAIALGVANQLTN 217
>CRTB_SYNP7 (P37269) Phytoene synthase (EC 2.5.1.-)| Length = 308 Score = 210 bits (535), Expect = 2e-54 Identities = 104/173 (60%), Positives = 124/173 (71%), Gaps = 6/173 (3%) Frame = +1 Query: 67 LGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKA 246 L +AY+ C ++ A YAKTFYLGT LM +R+A+WAIYVWCRRTDELVDGP A+ Sbjct: 16 LSEAYEECRQITARYAKTFYLGTLLMPEAKRQAIWAIYVWCRRTDELVDGPQAAQTNFAT 75 Query: 247 LDRWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDEL 426 LD WE+RLE LF G P D D AL DT +++P+DIQPFRDMIEG R+DL ++RY TF++L Sbjct: 76 LDAWERRLERLFAGEPEDDCDVALVDTLARYPLDIQPFRDMIEGQRMDLLQNRYSTFEDL 135 Query: 427 YLYCYYVAGTVGLMTVPVMGI------APDSKASAESVYNAALALGIANQLTN 567 Y YCY VAGTVGLM+ PVMGI AP + ALALGIANQLTN Sbjct: 136 YTYCYRVAGTVGLMSQPVMGIESTNSRAPWDPTTPPDPTQEALALGIANQLTN 188
>CRTY_SPIPL (O07333) Phytoene synthase (EC 2.5.1.-)| Length = 309 Score = 209 bits (532), Expect = 4e-54 Identities = 105/172 (61%), Positives = 128/172 (74%), Gaps = 7/172 (4%) Frame = +1 Query: 73 DAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALD 252 D+Y+ C ++ A+YAKTFYLGTQLM +R+A+WAIYVWCRRTDELVDGP AS T + LD Sbjct: 18 DSYELCRQITAQYAKTFYLGTQLMPLAKRQAIWAIYVWCRRTDELVDGPMASSTTLETLD 77 Query: 253 RWEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYL 432 WE++LE +F G P + D AL DT +FP+DIQPFRDMI G R+DL ++RY TFDEL L Sbjct: 78 HWEEQLESIFAGHPIEPVDVALVDTLGRFPLDIQPFRDMIAGQRMDLSRNRYNTFDELNL 137 Query: 433 YCYYVAGTVGLMTVPVMGIA-PDSKA---SAESVY---NAALALGIANQLTN 567 YCY VAGTVGLM++ VMG A PD +S+Y A+ALGIANQLTN Sbjct: 138 YCYRVAGTVGLMSLAVMGTAEPDLSVPWNRDQSIYYPKEEAIALGIANQLTN 189
>CRTB_THET2 (P37270) Phytoene synthase (EC 2.5.1.-)| Length = 289 Score = 100 bits (250), Expect = 2e-21 Identities = 61/157 (38%), Positives = 80/157 (50%) Frame = +1 Query: 97 VCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLED 276 V ++ TFYLG+ L E RK WA+Y CR DE VDG P+AL+ W +E Sbjct: 17 VLRAHSATFYLGSLLFPKEARKGAWAVYAACRLGDEAVDGEGGG---PEALEAWWAGVER 73 Query: 277 LFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYLYCYYVAGT 456 + GRP ++ L+ ++ I + F M EG DL R T EL YCY VAGT Sbjct: 74 AYRGRPLAEWEKGLAWALERWDIPFEAFLHMREGFLTDLGPVRLGTEAELLRYCYQVAGT 133 Query: 457 VGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 VG M P+ G +++A A+ LG A QLTN Sbjct: 134 VGRMMAPIAGGGKEAEA-------RAVKLGQAMQLTN 163
>CRTB_STRGR (P54977) Phytoene synthase (EC 2.5.1.-)| Length = 342 Score = 90.9 bits (224), Expect = 2e-18 Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 4/168 (2%) Frame = +1 Query: 76 AYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDG---PNASYITPKA 246 AY RC + A + KT++L T+L+ +RR AV A+Y + R D++VD P +A Sbjct: 19 AYTRCRGLNARHGKTYFLATRLLPVDRRPAVHALYGFARWADDIVDDLDTPATPGERARA 78 Query: 247 LDRWEKRLEDLFEG-RPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDE 423 L E +LE G R + AL+DTA+++ ID + F D + MR DL Y +++E Sbjct: 79 LLGLEAQLEAGLRGARAAEPVIRALADTAARYTIDHRHFTDFLSSMRSDLTVGGYASYEE 138 Query: 424 LYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 L Y + A +GL +PV+G + + E A ALG+A QLTN Sbjct: 139 LGRYMHGSAAVIGLQMLPVLG----TVVAREEAAPHAAALGVAFQLTN 182
>CRTB_MYCTU (P65860) Probable phytoene synthase (EC 2.5.1.-)| Length = 302 Score = 84.7 bits (208), Expect = 2e-16 Identities = 57/164 (34%), Positives = 87/164 (53%) Frame = +1 Query: 76 AYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDR 255 AY + A+ FY G +L+ E+R A+ A+Y RR D++ DG A LD Sbjct: 7 AYRITESITRTAARNFYYGIRLLPREKRAALSAVYALGRRIDDVADGELAPETKITELDA 66 Query: 256 WEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYLY 435 K L+++ + D AL+D A +FP+ I F ++I+G R+++ + R FDEL +Y Sbjct: 67 IRKSLDNIDDSS--DPVLVALADAARRFPVPIAMFAELIDGARMEIDWTGCRDFDELIVY 124 Query: 436 CYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 C AGT+G + + + G P S A++ A LGIA Q TN Sbjct: 125 CRRGAGTIGKLCLSIFG--PVSTATS----RYAEQLGIALQQTN 162
>CRTB_MYCBO (P65861) Probable phytoene synthase (EC 2.5.1.-)| Length = 302 Score = 84.7 bits (208), Expect = 2e-16 Identities = 57/164 (34%), Positives = 87/164 (53%) Frame = +1 Query: 76 AYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDR 255 AY + A+ FY G +L+ E+R A+ A+Y RR D++ DG A LD Sbjct: 7 AYRITESITRTAARNFYYGIRLLPREKRAALSAVYALGRRIDDVADGELAPETKITELDA 66 Query: 256 WEKRLEDLFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYLY 435 K L+++ + D AL+D A +FP+ I F ++I+G R+++ + R FDEL +Y Sbjct: 67 IRKSLDNIDDSS--DPVLVALADAARRFPVPIAMFAELIDGARMEIDWTGCRDFDELIVY 124 Query: 436 CYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 C AGT+G + + + G P S A++ A LGIA Q TN Sbjct: 125 CRRGAGTIGKLCLSIFG--PVSTATS----RYAEQLGIALQQTN 162
>CRTB_ENTAG (P22872) Phytoene synthase (EC 2.5.1.-)| Length = 309 Score = 83.2 bits (204), Expect = 5e-16 Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 9/171 (5%) Frame = +1 Query: 82 DRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDRWE 261 D + A +K+F +L P R++V +Y WCR D+++D + + A + Sbjct: 8 DHATQTMANGSKSFATAAKLFDPATRRSVLMLYTWCRHCDDVIDDQTHGFASEAAAEEEA 67 Query: 262 K----RLEDL----FEGRPY-DMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRT 414 RL L FEG D AA + A I + D ++G +D+ ++RY T Sbjct: 68 TQRLARLRTLTLAAFEGAEMQDPAFAAFQEVALTHGITPRMALDHLDGFAMDVAQTRYVT 127 Query: 415 FDELYLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 F++ YCY+VAG VGLM VMG+ E V + A LG+A QLTN Sbjct: 128 FEDTLRYCYHVAGVVGLMMARVMGVRD------ERVLDRACDLGLAFQLTN 172
>CRTB_PARSN (P54975) Phytoene synthase (EC 2.5.1.-)| Length = 304 Score = 74.7 bits (182), Expect = 2e-13 Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 8/166 (4%) Frame = +1 Query: 94 EVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLE 273 E + +++F +LM P R +Y WCR D+++DG A P+A++ + RL+ Sbjct: 10 EAITQGSQSFATAAKLMPPGIRDDTVMLYAWCRHADDVIDG-QALGSRPEAVNDPQARLD 68 Query: 274 DL-------FEGR-PYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELY 429 L +G P AAL A + D+IEG +D+ YRT D++ Sbjct: 69 GLRADTLAALQGDGPVTPPFAALRAVARRHDFPQAWPMDLIEGFAMDVEARDYRTLDDVL 128 Query: 430 LYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 Y Y+VAG VG+M VMG+ D V + A LG+A QLTN Sbjct: 129 EYSYHVAGIVGVMMARVMGVRDD------PVLDRACDLGLAFQLTN 168
>CRTB_PANAN (P21683) Phytoene synthase (EC 2.5.1.-)| Length = 309 Score = 73.2 bits (178), Expect = 5e-13 Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 9/167 (5%) Frame = +1 Query: 94 EVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPK-ALDRWEKRL 270 E A +K+F ++L + R++V +Y WCR D+++D + + AL E+RL Sbjct: 12 ETMAVGSKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFQARQPALQTPEQRL 71 Query: 271 EDL-------FEG-RPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDEL 426 L + G + ++ AA + A I D +EG +D+ +++Y D+ Sbjct: 72 MQLEMKTRQAYAGSQMHEPAFAAFQEVAMAHDIAPAYAFDHLEGFAMDVREAQYSQLDDT 131 Query: 427 YLYCYYVAGTVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTN 567 YCY+VAG VGLM +MG+ + + + A LG+A QLTN Sbjct: 132 LRYCYHVAGVVGLMMAQIMGVRDN------ATLDRACDLGLAFQLTN 172
>Y4AC_RHISN (P55350) Putative phytoene synthase (EC 2.5.1.-)| Length = 279 Score = 67.4 bits (163), Expect = 3e-11 Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 1/151 (0%) Frame = +1 Query: 118 TFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLEDLFEGRPY 297 +FYLG + + P +R+A++ IY +CR+ D++ D AL +W ++ L++ P Sbjct: 19 SFYLGMRTLPPVQREAIFQIYSFCRQVDDIADSDEPREHRLAALQQWRDHIDALYQCVPP 78 Query: 298 DMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKS-RYRTFDELYLYCYYVAGTVGLMTV 474 L+ + + F + + F +++GM +D+ + R L LYC VA VG M+V Sbjct: 79 PRLKDYLA-SVTTFGLKREDFLAVVDGMEMDVLQDIRAPKMATLDLYCDRVASAVGRMSV 137 Query: 475 PVMGIAPDSKASAESVYNAALALGIANQLTN 567 V G+ S E A LG A QLTN Sbjct: 138 RVFGL------SEEDGIALAHHLGRALQLTN 162
>CRTB_RHOCA (P17056) Phytoene synthase (EC 2.5.1.-)| Length = 339 Score = 58.5 bits (140), Expect = 1e-08 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 6/164 (3%) Frame = +1 Query: 94 EVCAEYAKT----FYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDRWE 261 EVC E +T F+ ++++ R A+Y +CR D+ VD A A+ + Sbjct: 8 EVCRELIRTGSYSFHAASRVLPARVRDPALALYAFCRVADDEVDEVGAPRDKAAAVLKLG 67 Query: 262 KRLEDLFEGRPYDM-YDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYLYC 438 RLED++ GRP + D A + +F + + ++EG D Y T ++ Y Sbjct: 68 DRLEDIYAGRPRNAPSDRAFAAVVEEFEMPRELPEALLEGFAWDAEGRWYHTLSDVQAYS 127 Query: 439 YYVAGTVGLMTVPVMGIA-PDSKASAESVYNAALALGIANQLTN 567 VA VG M +M + PD+ A A LG+A Q++N Sbjct: 128 ARVAAAVGAMMCVLMRVRNPDALA-------RACDLGLAMQMSN 164
>LCPS_RHIRA (Q9UUQ6) CarRP protein [Includes: Lycopene cyclase (EC 1.-.-.-);| Phytoene synthase (EC 2.5.1.-)] Length = 614 Score = 48.1 bits (113), Expect = 2e-05 Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 20/178 (11%) Frame = +1 Query: 94 EVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPK-ALDRWEKRL 270 ++ + +K+FY + + + R+ + +Y +CR TD+L D T K L + + Sbjct: 294 DILRKASKSFYTASAVFPGDVRQELGVLYAFCRATDDLCDNEQVPVQTRKEQLILTHQFV 353 Query: 271 EDLFEGR-------PYDMYDAAL---------SDTASKFPIDIQPFRDMIEGMRLDLWKS 402 DLF + +D Y+ L S T + ++ +++++G + DL + Sbjct: 354 SDLFGQKTSAPTAIDWDFYNDQLPASCISAFKSFTRLRHVLEAGAIKELLDGYKWDLERR 413 Query: 403 RYRTFDELYLYCYYVAGTVGLMTVPVMGIAPDSKASAES---VYNAALALGIANQLTN 567 R ++L Y VA +VG M ++ D AS + + A +G+ Q TN Sbjct: 414 SIRDQEDLRYYSACVASSVGEMCTRIILAHADKPASRQQTQWIIQRAREMGLVLQYTN 471
>CRTB_RHOS4 (P54905) Phytoene synthase (EC 2.5.1.-)| Length = 355 Score = 47.8 bits (112), Expect = 2e-05 Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 9/171 (5%) Frame = +1 Query: 82 DRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVD-------GPNASYITP 240 D C E+ + +F+ ++L+ R A+Y +CR D+ VD + + Sbjct: 8 DACREMIRTGSYSFHAASRLLPERVRAPSLALYAFCRVADDAVDEAVNDGQREEDAEVKR 67 Query: 241 KALDRWEKRLEDLFEGRPYDM-YDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTF 417 +A+ RL+ ++ GRP + D A + +F + ++EG+ D Y +F Sbjct: 68 RAVLSLRDRLDLVYGGRPRNAPADRAFAAVVEEFEMPRALPEALLEGLAWDAVGRSYDSF 127 Query: 418 DELYLYCYYVAGTVGLMTVPVMGIA-PDSKASAESVYNAALALGIANQLTN 567 + Y VA VG M +M + PD V A LG+A QLTN Sbjct: 128 SGVLDYSARVAAAVGAMMCVLMRVRDPD-------VLARACDLGLAMQLTN 171
>Y4AD_RHISN (P55351) Hypothetical 32.5 kDa protein y4aD| Length = 292 Score = 41.6 bits (96), Expect = 0.002 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 4/128 (3%) Frame = +1 Query: 115 KTFYLGTQLMTPERRKAVWAIYVWCRRTDELVD----GPNASYITPKALDRWEKRLEDLF 282 K F + + ++ P R + A Y + R D++ D P+ + LD E L Sbjct: 16 KNFPVASWIIHPRHRALILAFYRFVRMADDIADHATLAPDEKLLY---LDLLEAELLGKG 72 Query: 283 EGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYLYCYYVAGTVG 462 E R ++ D P + D++ R+D+ K RY +DE+ YC Y A VG Sbjct: 73 ETRAEAVHLRTALDRRGMPP---RHALDLLTAFRMDVTKQRYENWDEVIDYCRYSAMPVG 129 Query: 463 LMTVPVMG 486 + V G Sbjct: 130 RFVLDVHG 137
>PSY_NEUCR (P37295) Phytoene synthase (EC 2.5.1.-) (Albino-2 protein)| Length = 602 Score = 36.6 bits (83), Expect = 0.051 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 40/192 (20%) Frame = +1 Query: 112 AKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLEDLFEGR 291 +++FYL L + R + +Y +CR D+LVD + + + W +L + Sbjct: 295 SRSFYLANSLFSGRLRIDLILLYSFCRLADDLVDDAKSR----REVLSWTAKLNHFLDLH 350 Query: 292 PYDMYDAALSDTASK-----------FP--------------IDIQPFRDMIEGMRLDLW 396 D A D K FP + +P D+I+G +D Sbjct: 351 YKDA--DATEDPKKKAERIDAYIKTAFPPCAYQALHLLPTHILPPKPLYDLIKGFEMDSQ 408 Query: 397 KSRYRTFD------------ELYLYCYYVAGTVGLMTVP--VMGIAPD-SKASAESVYNA 531 + + T D +L Y YVAGTVG + + + PD S + A Sbjct: 409 FTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCIALIIYHCLPDMSDTQKRELETA 468 Query: 532 ALALGIANQLTN 567 A +GIA Q N Sbjct: 469 ACRMGIALQYVN 480
>OXAA_BLOFL (Q7U351) Inner membrane protein oxaA| Length = 558 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 277 LFEGRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYLY 435 L Y +Y + D S +PI I+ + ++I+ + D+ +S++ LY Y Sbjct: 180 LLNRNDYSIYITYIIDNQSTYPIHIKLYGNLIQSIHSDVIQSKHNDHCPLYTY 232
>FDFT_YEAST (P29704) Squalene synthetase (EC 2.5.1.21) (SQS) (SS)| (Farnesyl-diphosphate farnesyltransferase) (FPP:FPP farnesyltransferase) Length = 444 Score = 30.0 bits (66), Expect = 4.8 Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 24/184 (13%) Frame = +1 Query: 88 CGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASY-ITPKALDRWEK 264 C E+ +++F + + PE R V Y+ R D + D + + + L + + Sbjct: 42 CFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHE 101 Query: 265 RL---EDLFEGRPYDMYDAALSDTASKFPIDIQPFRD------------MIEGMRLDLWK 399 +L + F+G D+ D A+ I+ + M GM + Sbjct: 102 KLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILD 161 Query: 400 SRY-----RTFDELYLYCYYVAGTVG---LMTVPVMGIAPDSKASAESVYNAALALGIAN 555 Y +T + +YC+YVAG VG + + A +S S E +Y ++G+ Sbjct: 162 ENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYE---SMGLFL 218 Query: 556 QLTN 567 Q TN Sbjct: 219 QKTN 222
>S27A2_RAT (P97524) Very-long-chain acyl-CoA synthetase (EC 6.2.1.-) (VLCS)| (Very-long-chain-fatty-acid-CoA ligase) (VLACS) (THCA-CoA ligase) (Fatty-acid-coenzyme A ligase, very long-chain 1) (Long-chain-fatty-acid--CoA ligase) (EC 6.2.1.3) (Fatty acid tr Length = 620 Score = 30.0 bits (66), Expect = 4.8 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = +1 Query: 376 GMRLDLWKSRYRTFDELYLYCYYVA--GTVGLMTVP 477 G+R D+W+ + F ++++Y +Y + G +G M P Sbjct: 340 GLRGDVWREFIKRFGDIHIYEFYASTEGNIGFMNYP 375
>YFMO_BACSU (O06473) Multidrug efflux protein yfmO| Length = 396 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = +1 Query: 424 LYLYCYYVAGTV-----GLMTVPVMGIAPDSKASAESVYNAALALG 546 L + C VAG V +MT VMG AP ++ A S Y++ +G Sbjct: 302 LIITCIVVAGAVLGMVNTIMTTAVMGSAPVERSIASSAYSSVRFIG 347
>CHA4_YEAST (P43634) CHA4 activatory protein| Length = 648 Score = 29.3 bits (64), Expect = 8.1 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 6/44 (13%) Frame = +1 Query: 337 FPIDIQPFRDMIEGM------RLDLWKSRYRTFDELYLYCYYVA 450 F +I+ R+++EG L +WK++++TF++ +Y Y A Sbjct: 514 FIYEIKQSRELVEGYVDELYYLLKVWKNKFKTFEKATIYMIYSA 557
>PYRF_METAC (Q8TS37) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 221 Score = 29.3 bits (64), Expect = 8.1 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +1 Query: 19 DEQMEQEGDAELGWGLLG-DAYDRCGEVCAEYAKTFYLGTQLMTP 150 D+ E DA + G G D+ D C E+ +EY K ++ +++ P Sbjct: 75 DQVFEAGADAVIAQGFTGRDSLDACIEIASEYRKDVFVVSEMSHP 119 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,391,343 Number of Sequences: 219361 Number of extensions: 1536932 Number of successful extensions: 4163 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4047 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4150 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)