ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63k05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476319.1| Oryza sativa (japonica cultivar-group), predic... 131 3e-27
2dbj|AK065602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
3dbj|AK099720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 5e-26
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
5dbj|AP005295.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
7dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
8dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
9gb|AF520810.1| Nicotiana tabacum DNA-binding protein phosphatase... 50 0.009
10dbj|AK068472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
11ref|NM_183641.1| Oryza sativa (japonica cultivar-group), predic... 48 0.034
12dbj|AK070996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.034
13dbj|AK070333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.034
14ref|NM_128928.2| Arabidopsis thaliana catalytic/ protein phospha... 44 0.53
15gb|AY091323.1| Arabidopsis thaliana putative protein phosphatase... 44 0.53
16gb|AY070460.1| Arabidopsis thaliana putative protein phosphatase... 44 0.53
17emb|AJ230894.1|RNO230894 Rattus norvegicus repeat; map NOS-end 42 2.1
18gb|AC074042.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.1
19emb|AL833771.4| Mouse DNA sequence from clone RP23-228H14 on chr... 42 2.1
20gb|AC123609.11| Mus musculus chromosome 3, clone RP23-281B17, co... 40 8.2
21ref|NM_192595.1| Oryza sativa (japonica cultivar-group), predic... 40 8.2
22gb|AC110513.6| Mus musculus chromosome 3, clone RP24-147L5, comp... 40 8.2
23gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's H... 40 8.2
24gb|AC120974.7| Rattus norvegicus 11 BAC CH230-358O2 (Children's ... 40 8.2
25ref|XM_957245.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
26ref|XM_326450.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
27gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome... 40 8.2
28gb|AC117232.3| Mus musculus BAC clone RP23-405K2 from chromosome... 40 8.2
29gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosom... 40 8.2
30emb|CR352207.9| Zebrafish DNA sequence from clone CH211-110B5 in... 40 8.2
31emb|AL590642.9| Human DNA sequence from clone RP11-164D15 on chr... 40 8.2
32ref|XM_964218.1| PREDICTED: Tribolium castaneum similar to CG601... 40 8.2
33emb|CR589943.13| Zebrafish DNA sequence from clone DKEYP-73C8 in... 40 8.2
34gb|AC026636.7| Homo sapiens chromosome 15, clone RP11-170E16, co... 40 8.2
35gb|AC009335.10| Homo sapiens chromosome 17, clone RP11-20O2, com... 40 8.2
36gb|AC024032.5| Homo sapiens BAC clone RP11-196J14 from 4, comple... 40 8.2
37gb|AF205597.1|AF205597 Drosophila melanogaster clone DS05441 Fra... 40 8.2
38gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome... 40 8.2
39emb|BX294189.11| Zebrafish DNA sequence from clone CH211-218D20 ... 40 8.2
40gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome... 40 8.2
41emb|CR354498.1| Pinus pinaster SSR, clone PPA5C02 40 8.2
42dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
43gb|AC009183.5|AC009183 Drosophila melanogaster, chromosome 3R, r... 40 8.2
44gb|AC114808.4| Homo sapiens BAC clone RP11-1268F2 from 2, comple... 40 8.2
45gb|AC136499.2| Homo sapiens chromosome 19 clone RP11-240C14, com... 40 8.2
46gb|AC104938.7| Homo sapiens chromosome 15, clone CTD-2524L6, com... 40 8.2
47gb|AC087501.16| Homo sapiens chromosome 17, clone RP11-565F19, c... 40 8.2
48gb|AC144444.2| Homo sapiens fosmid clone XXFOS-83269E11 from 2, ... 40 8.2
49gb|AC020949.3|AC020949 Homo sapiens chromosome 19 clone LLNLR-24... 40 8.2
50dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
51dbj|AK102072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
52dbj|AK099544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
53dbj|AK067074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
54gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23... 40 8.2
55emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on ch... 40 8.2 
>ref|XM_476319.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1167

 Score =  131 bits (66), Expect = 3e-27
 Identities = 162/194 (83%)
 Strand = Plus / Plus

                                                                       
Query: 410 aattttgtcccaactatccggtcaggggactggtctgacattggtggccgtgactacatg 469
           ||||||||||||| ||| || || ||||| ||||| || ||||| || ||| | ||||||
Sbjct: 259 aattttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatg 318

                                                                       
Query: 470 gaagatgcgcatgtgtgcatccccaacctagccaagaattttggttttaacatggtggat 529
           |||||| | |||||||| ||  |  ||||||| ||||| ||||||| | |   |||||||
Sbjct: 319 gaagatacccatgtgtgtattactgacctagctaagaactttggttatcaatcggtggat 378

                                                                       
Query: 530 gatgaagttatttccttttatggggtctttgatggccatggtggaaaagatgctgcacag 589
            |||||| ||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 379 aatgaagctatttccttttatggggtctttgatgggcatggtggaaaagatgctgcccat 438

                         
Query: 590 tatgttcgcgataa 603
           | |||||| |||||
Sbjct: 439 tttgttcgtgataa 452



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 327 tgatggagagagtttgtgagaacac 351
           ||||||| |||||||||||||||||
Sbjct: 200 tgatggaaagagtttgtgagaacac 224
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>dbj|AK065602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026O16, full
           insert sequence
          Length = 1713

 Score =  131 bits (66), Expect = 3e-27
 Identities = 162/194 (83%)
 Strand = Plus / Plus

                                                                       
Query: 410 aattttgtcccaactatccggtcaggggactggtctgacattggtggccgtgactacatg 469
           ||||||||||||| ||| || || ||||| ||||| || ||||| || ||| | ||||||
Sbjct: 425 aattttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatg 484

                                                                       
Query: 470 gaagatgcgcatgtgtgcatccccaacctagccaagaattttggttttaacatggtggat 529
           |||||| | |||||||| ||  |  ||||||| ||||| ||||||| | |   |||||||
Sbjct: 485 gaagatacccatgtgtgtattactgacctagctaagaactttggttatcaatcggtggat 544

                                                                       
Query: 530 gatgaagttatttccttttatggggtctttgatggccatggtggaaaagatgctgcacag 589
            |||||| ||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 545 aatgaagctatttccttttatggggtctttgatgggcatggtggaaaagatgctgcccat 604

                         
Query: 590 tatgttcgcgataa 603
           | |||||| |||||
Sbjct: 605 tttgttcgtgataa 618



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 328 gatggagagagtttgtgagaacac 351
           |||||| |||||||||||||||||
Sbjct: 367 gatggaaagagtttgtgagaacac 390
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>dbj|AK099720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088F12, full
           insert sequence
          Length = 1660

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Plus

                                                                       
Query: 412 ttttgtcccaactatccggtcaggggactggtctgacattggtggccgtgactacatgga 471
           ||||||||||  |||||| |||||||||||||| || ||||| || || || ||||||||
Sbjct: 377 ttttgtcccagttatccgatcaggggactggtcggatattggaggtcgcgattacatgga 436

                                                                       
Query: 472 agatgcgcatgtgtgcatccccaacctagccaagaattttggttttaacatggtggatga 531
           |||||| ||||| |||||| |  | ||||| || |||||||||  |||    ||||||||
Sbjct: 437 agatgctcatgtctgcatctcagatctagctaataattttggtcataattcagtggatga 496

                                                                       
Query: 532 tgaagttatttccttttatggggtctttgatggccatggtggaaaagatgctgcacagta 591
           |||  ||||||| |||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct: 497 tgagattatttcgttttatggggtctttgatgggcatggtggaaaagatgcagctcatta 556

                       
Query: 592 tgttcgcgataa 603
           ||| || |||||
Sbjct: 557 tgtgcgtgataa 568



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 314 ccggcagatttcgtgatggagagagtttgtgagaacacagtgtccattgatttcaagca 372
           |||||||| |||| |||||||| |||||||||||||||||| ||  |||||||||||||
Sbjct: 303 ccggcagacttcgagatggagaaagtttgtgagaacacagtatctcttgatttcaagca 361
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                            
Query: 412      ttttgtcccaactatccggtcaggggactggtctgacattggtggccgtgactacatgga 471
                ||||||||||  |||||| |||||||||||||| || ||||| || || || ||||||||
Sbjct: 34046907 ttttgtcccagttatccgatcaggggactggtcggatattggaggtcgcgattacatgga 34046966

                                                                            
Query: 472      agatgcgcatgtgtgcatccccaacctagccaagaattttggttttaacatggtggatga 531
                |||||| ||||| |||||| |  | ||||| || |||||||||  |||    ||||||||
Sbjct: 34046967 agatgctcatgtctgcatctcagatctagctaataattttggtcataattcagtggatga 34047026

                                        
Query: 532      tgaagttatttccttttatggggt 555
                |||  |||||||||||||||||||
Sbjct: 34047027 tgagattatttccttttatggggt 34047050



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 328      gatggagagagtttgtgagaacacagtgtccattgatttcaagca 372
                |||||||| |||||||||||||||||| ||  |||||||||||||
Sbjct: 34046847 gatggagaaagtttgtgagaacacagtatctcttgatttcaagca 34046891



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 553      ggtctttgatggccatggtggaaaagatgctgcacagtatgttcgcgataa 603
                |||||||||||| ||||||||||||||||| || || ||||| || |||||
Sbjct: 34047311 ggtctttgatgggcatggtggaaaagatgcagctcattatgtgcgtgataa 34047361
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>dbj|AP005295.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1695_D07
          Length = 110585

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                         
Query: 412   ttttgtcccaactatccggtcaggggactggtctgacattggtggccgtgactacatgga 471
             ||||||||||  |||||| |||||||||||||| || ||||| || || || ||||||||
Sbjct: 74182 ttttgtcccagttatccgatcaggggactggtcggatattggaggtcgcgattacatgga 74241

                                                                         
Query: 472   agatgcgcatgtgtgcatccccaacctagccaagaattttggttttaacatggtggatga 531
             |||||| ||||| |||||| |  | ||||| || |||||||||  |||    ||||||||
Sbjct: 74242 agatgctcatgtctgcatctcagatctagctaataattttggtcataattcagtggatga 74301

                                     
Query: 532   tgaagttatttccttttatggggt 555
             |||  |||||||||||||||||||
Sbjct: 74302 tgagattatttccttttatggggt 74325



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 328   gatggagagagtttgtgagaacacagtgtccattgatttcaagca 372
             |||||||| |||||||||||||||||| ||  |||||||||||||
Sbjct: 74122 gatggagaaagtttgtgagaacacagtatctcttgatttcaagca 74166



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 553   ggtctttgatggccatggtggaaaagatgctgcacagtatgttcgcgataa 603
             |||||||||||| ||||||||||||||||| || || ||||| || |||||
Sbjct: 74586 ggtctttgatgggcatggtggaaaagatgcagctcattatgtgcgtgataa 74636
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                           
Query: 410     aattttgtcccaactatccggtcaggggactggtctgacattggtggccgtgactacatg 469
               ||||||||||||| ||| || || ||||| ||||| || ||||| || ||| | ||||||
Sbjct: 3961025 aattttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatg 3960966

                                                                           
Query: 470     gaagatgcgcatgtgtgcatccccaacctagccaagaattttggttttaacatggtggat 529
               |||||| | |||||||| ||  |  ||||||| ||||| ||||||| | |   |||||||
Sbjct: 3960965 gaagatacccatgtgtgtattactgacctagctaagaactttggttatcaatcggtggat 3960906

                                         
Query: 530     gatgaagttatttccttttatggggt 555
                |||||| ||||||||||||||||||
Sbjct: 3960905 aatgaagctatttccttttatggggt 3960880



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 553     ggtctttgatggccatggtggaaaagatgctgcacagtatgttcgcgataa 603
               |||||||||||| |||||||||||||||||||| || | |||||| |||||
Sbjct: 3960281 ggtctttgatgggcatggtggaaaagatgctgcccattttgttcgtgataa 3960231



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 328     gatggagagagtttgtgagaacac 351
               |||||| |||||||||||||||||
Sbjct: 3961083 gatggaaagagtttgtgagaacac 3961060
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>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBb0019L07
          Length = 131650

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                        
Query: 410  aattttgtcccaactatccggtcaggggactggtctgacattggtggccgtgactacatg 469
            ||||||||||||| ||| || || ||||| ||||| || ||||| || ||| | ||||||
Sbjct: 4680 aattttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatg 4621

                                                                        
Query: 470  gaagatgcgcatgtgtgcatccccaacctagccaagaattttggttttaacatggtggat 529
            |||||| | |||||||| ||  |  ||||||| ||||| ||||||| | |   |||||||
Sbjct: 4620 gaagatacccatgtgtgtattactgacctagctaagaactttggttatcaatcggtggat 4561

                                      
Query: 530  gatgaagttatttccttttatggggt 555
             |||||| ||||||||||||||||||
Sbjct: 4560 aatgaagctatttccttttatggggt 4535



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 553  ggtctttgatggccatggtggaaaagatgctgcacagtatgttcgcgataa 603
            |||||||||||| |||||||||||||||||||| || | |||||| |||||
Sbjct: 3936 ggtctttgatgggcatggtggaaaagatgctgcccattttgttcgtgataa 3886



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 328  gatggagagagtttgtgagaacac 351
            |||||| |||||||||||||||||
Sbjct: 4738 gatggaaagagtttgtgagaacac 4715
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                         
Query: 410   aattttgtcccaactatccggtcaggggactggtctgacattggtggccgtgactacatg 469
             ||||||||||||| ||| || || ||||| ||||| || ||||| || ||| | ||||||
Sbjct: 66901 aattttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatg 66842

                                                                         
Query: 470   gaagatgcgcatgtgtgcatccccaacctagccaagaattttggttttaacatggtggat 529
             |||||| | |||||||| ||  |  ||||||| ||||| ||||||| | |   |||||||
Sbjct: 66841 gaagatacccatgtgtgtattactgacctagctaagaactttggttatcaatcggtggat 66782

                                       
Query: 530   gatgaagttatttccttttatggggt 555
              |||||| ||||||||||||||||||
Sbjct: 66781 aatgaagctatttccttttatggggt 66756



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 553   ggtctttgatggccatggtggaaaagatgctgcacagtatgttcgcgataa 603
             |||||||||||| |||||||||||||||||||| || | |||||| |||||
Sbjct: 66157 ggtctttgatgggcatggtggaaaagatgctgcccattttgttcgtgataa 66107



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 328   gatggagagagtttgtgagaacac 351
             |||||| |||||||||||||||||
Sbjct: 66959 gatggaaagagtttgtgagaacac 66936
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>gb|AF520810.1| Nicotiana tabacum DNA-binding protein phosphatase 2C (DBP1) mRNA,
           complete cds
          Length = 1504

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 545 ttttatggggtctttgatggccatggtgg 573
           |||||||| ||||||||||||||||||||
Sbjct: 472 ttttatggagtctttgatggccatggtgg 500
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>dbj|AK068472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155M07, full
           insert sequence
          Length = 1770

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 545 ttttatggggtctttgatggccatggtggaaaa 577
           ||||||||||| |||||||| ||||||||||||
Sbjct: 695 ttttatggggtttttgatgggcatggtggaaaa 727
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>ref|NM_183641.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 543 ccttttatggggtctttgatggccatgg 570
           |||| |||||||||||||||||||||||
Sbjct: 320 ccttctatggggtctttgatggccatgg 347
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>dbj|AK070996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080K08, full
           insert sequence
          Length = 1521

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 545 ttttatggggtctttgatggccatggtggaaa 576
           ||||||||||| |||||||| |||||||||||
Sbjct: 446 ttttatggggtttttgatgggcatggtggaaa 477
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>dbj|AK070333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049D10, full
           insert sequence
          Length = 1642

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 543 ccttttatggggtctttgatggccatgg 570
           |||| |||||||||||||||||||||||
Sbjct: 607 ccttctatggggtctttgatggccatgg 634
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>ref|NM_128928.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/ protein
            serine/threonine phosphatase AT2G33700 mRNA, complete cds
          Length = 2128

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 543  ccttttatggggtctttgatggccatggtggaaaagatgctgcaca 588
            |||| |||||||| ||||||||||| ||||| | |||||| |||||
Sbjct: 1141 ccttctatggggtatttgatggccacggtggcacagatgcagcaca 1186
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>gb|AY091323.1| Arabidopsis thaliana putative protein phosphatase 2C (At2g33700)
           mRNA, complete cds
          Length = 1174

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 543 ccttttatggggtctttgatggccatggtggaaaagatgctgcaca 588
           |||| |||||||| ||||||||||| ||||| | |||||| |||||
Sbjct: 365 ccttctatggggtatttgatggccacggtggcacagatgcagcaca 410
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>gb|AY070460.1| Arabidopsis thaliana putative protein phosphatase 2C (At2g33700)
            mRNA, complete cds
          Length = 2119

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 543  ccttttatggggtctttgatggccatggtggaaaagatgctgcaca 588
            |||| |||||||| ||||||||||| ||||| | |||||| |||||
Sbjct: 1142 ccttctatggggtatttgatggccacggtggcacagatgcagcaca 1187
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>emb|AJ230894.1|RNO230894 Rattus norvegicus repeat; map NOS-end
          Length = 836

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 cacagcaacagagagacagag 244
           |||||||||||||||||||||
Sbjct: 623 cacagcaacagagagacagag 603
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>gb|AC074042.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-99G18, complete
              sequence
          Length = 226048

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 224    cacagcaacagagagacagag 244
              |||||||||||||||||||||
Sbjct: 145511 cacagcaacagagagacagag 145531
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>emb|AL833771.4| Mouse DNA sequence from clone RP23-228H14 on chromosome 2, complete
             sequence
          Length = 189283

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 220   caggcacagcaacagagagacagag 244
             ||||||||| |||||||||||||||
Sbjct: 17994 caggcacagaaacagagagacagag 17970
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>gb|AC123609.11| Mus musculus chromosome 3, clone RP23-281B17, complete sequence
          Length = 223516

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    acagcaacagagagacagag 244
              ||||||||||||||||||||
Sbjct: 124855 acagcaacagagagacagag 124836
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>ref|NM_192595.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3495

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 tggagggattcgaggacgcg 301
           ||||||||||||||||||||
Sbjct: 653 tggagggattcgaggacgcg 634
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>gb|AC110513.6| Mus musculus chromosome 3, clone RP24-147L5, complete sequence
          Length = 154446

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   ggaagatgcgcatgtgtgca 488
             ||||||||||||||||||||
Sbjct: 37555 ggaagatgcgcatgtgtgca 37574
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>gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 209654

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 561    atggccatggtggaaaagatgctg 584
              ||||||||||||| ||||||||||
Sbjct: 116703 atggccatggtggcaaagatgctg 116726
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>gb|AC120974.7| Rattus norvegicus 11 BAC CH230-358O2 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 198650

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    acagcaacagagagacagag 244
              ||||||||||||||||||||
Sbjct: 102693 acagcaacagagagacagag 102674
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>ref|XM_957245.1| Neurospora crassa OR74A hypothetical protein (NCU06596.1) partial
           mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 gccccggtctcggccgcgtc 131
           ||||||||||||||||||||
Sbjct: 19  gccccggtctcggccgcgtc 38
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>ref|XM_326450.1| Neurospora crassa OR74A hypothetical protein (NCU06596.1) partial
           mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 gccccggtctcggccgcgtc 131
           ||||||||||||||||||||
Sbjct: 19  gccccggtctcggccgcgtc 38
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>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence
          Length = 157067

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tggcacaattttgtcccaac 423
             ||||||||||||||||||||
Sbjct: 48966 tggcacaattttgtcccaac 48947
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>gb|AC117232.3| Mus musculus BAC clone RP23-405K2 from chromosome 10, complete sequence
          Length = 204465

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   acagcaacagagagacagag 244
             ||||||||||||||||||||
Sbjct: 63263 acagcaacagagagacagag 63244
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>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence
          Length = 202932

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    tggcacaattttgtcccaac 423
              ||||||||||||||||||||
Sbjct: 145675 tggcacaattttgtcccaac 145656
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>emb|CR352207.9| Zebrafish DNA sequence from clone CH211-110B5 in linkage group 7,
             complete sequence
          Length = 180005

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cagcaacagagagacagagc 245
             ||||||||||||||||||||
Sbjct: 53449 cagcaacagagagacagagc 53430
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>emb|AL590642.9| Human DNA sequence from clone RP11-164D15 on chromosome 9 Contains part
             of the CDK5RAP2 gene for CDK5 regulatory subunit
             associated protein 2 (C48), complete sequence
          Length = 73149

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 562   tggccatggtggaaaagatg 581
             ||||||||||||||||||||
Sbjct: 58832 tggccatggtggaaaagatg 58813
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>ref|XM_964218.1| PREDICTED: Tribolium castaneum similar to CG6019-PA (LOC657782),
           mRNA
          Length = 4767

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  aaccctccactcggactcca 107
           ||||||||||||||||||||
Sbjct: 859 aaccctccactcggactcca 840
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>emb|CR589943.13| Zebrafish DNA sequence from clone DKEYP-73C8 in linkage group 18,
              complete sequence
          Length = 179531

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    cagcaacagagagacagagc 245
              ||||||||||||||||||||
Sbjct: 140688 cagcaacagagagacagagc 140707
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>gb|AC026636.7| Homo sapiens chromosome 15, clone RP11-170E16, complete sequence
          Length = 151526

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   acagcaacagagagacagag 244
             ||||||||||||||||||||
Sbjct: 24647 acagcaacagagagacagag 24666



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   acagcaacagagagacagag 244
             ||||||||||||||||||||
Sbjct: 24549 acagcaacagagagacagag 24568
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>gb|AC009335.10| Homo sapiens chromosome 17, clone RP11-20O2, complete sequence
          Length = 159611

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 517    taacatggtggatgatgaag 536
              ||||||||||||||||||||
Sbjct: 140067 taacatggtggatgatgaag 140086
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>gb|AC024032.5| Homo sapiens BAC clone RP11-196J14 from 4, complete sequence
          Length = 177038

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    atggtggaaaagatgctgca 586
              ||||||||||||||||||||
Sbjct: 105162 atggtggaaaagatgctgca 105143
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>gb|AF205597.1|AF205597 Drosophila melanogaster clone DS05441 Fragile X related gene,
            complete cds
          Length = 9626

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 529  tgatgaagttatttcctttt 548
            ||||||||||||||||||||
Sbjct: 8263 tgatgaagttatttcctttt 8282
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>gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome 13, complete sequence
          Length = 176432

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    acacagtgtccattgatttc 367
              ||||||||||||||||||||
Sbjct: 139907 acacagtgtccattgatttc 139888
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>emb|BX294189.11| Zebrafish DNA sequence from clone CH211-218D20 in linkage group 9,
             complete sequence
          Length = 194025

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   tagccaagaattttggtttt 517
             ||||||||||||||||||||
Sbjct: 96136 tagccaagaattttggtttt 96117
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>gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome 13, complete sequence
          Length = 204262

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   acacagtgtccattgatttc 367
             ||||||||||||||||||||
Sbjct: 67889 acacagtgtccattgatttc 67870
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>emb|CR354498.1| Pinus pinaster SSR, clone PPA5C02
          Length = 441

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 525 tggatgatgaagttatttcc 544
           ||||||||||||||||||||
Sbjct: 371 tggatgatgaagttatttcc 352
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 282      tggagggattcgaggacgcg 301
                ||||||||||||||||||||
Sbjct: 23182916 tggagggattcgaggacgcg 23182935
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>gb|AC009183.5|AC009183 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone
              BACR39F04, complete sequence
          Length = 192055

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 529    tgatgaagttatttcctttt 548
              ||||||||||||||||||||
Sbjct: 125264 tgatgaagttatttcctttt 125245
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>gb|AC114808.4| Homo sapiens BAC clone RP11-1268F2 from 2, complete sequence
          Length = 176316

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    acagcaacagagagacagag 244
              ||||||||||||||||||||
Sbjct: 165294 acagcaacagagagacagag 165275
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>gb|AC136499.2| Homo sapiens chromosome 19 clone RP11-240C14, complete sequence
          Length = 92689

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 555   tctttgatggccatggtggaaaag 578
             ||||||||||| ||||||||||||
Sbjct: 39046 tctttgatggctatggtggaaaag 39023



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 555   tctttgatggccatggtggaaaag 578
             ||||||||||| ||||||||||||
Sbjct: 38704 tctttgatggctatggtggaaaag 38681
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>gb|AC104938.7| Homo sapiens chromosome 15, clone CTD-2524L6, complete sequence
          Length = 157267

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   acagcaacagagagacagag 244
             ||||||||||||||||||||
Sbjct: 11428 acagcaacagagagacagag 11409



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   acagcaacagagagacagag 244
             ||||||||||||||||||||
Sbjct: 11336 acagcaacagagagacagag 11317
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>gb|AC087501.16| Homo sapiens chromosome 17, clone RP11-565F19, complete sequence
          Length = 192197

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    taacatggtggatgatgaag 536
              ||||||||||||||||||||
Sbjct: 185606 taacatggtggatgatgaag 185587
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>gb|AC144444.2| Homo sapiens fosmid clone XXFOS-83269E11 from 2, complete sequence
          Length = 36482

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  acagcaacagagagacagag 244
            ||||||||||||||||||||
Sbjct: 9488 acagcaacagagagacagag 9469
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>gb|AC020949.3|AC020949 Homo sapiens chromosome 19 clone LLNLR-243G4, complete sequence
          Length = 33290

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 555   tctttgatggccatggtggaaaag 578
             ||||||||||| ||||||||||||
Sbjct: 21417 tctttgatggctatggtggaaaag 21440



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 555   tctttgatggccatggtggaaaag 578
             ||||||||||| ||||||||||||
Sbjct: 21075 tctttgatggctatggtggaaaag 21098
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>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710A02
          Length = 157201

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    tggagggattcgaggacgcg 301
              ||||||||||||||||||||
Sbjct: 115075 tggagggattcgaggacgcg 115094
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>dbj|AK102072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082G14, full
           insert sequence
          Length = 3676

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 tggagggattcgaggacgcg 301
           ||||||||||||||||||||
Sbjct: 220 tggagggattcgaggacgcg 201
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>dbj|AK099544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032O15, full
           insert sequence
          Length = 3572

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 tggagggattcgaggacgcg 301
           ||||||||||||||||||||
Sbjct: 172 tggagggattcgaggacgcg 153
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>dbj|AK067074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093M04, full
           insert sequence
          Length = 1630

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 543 ccttttatggggtctttgatggccatgg 570
           |||| ||||||||||| |||||||||||
Sbjct: 540 ccttctatggggtcttcgatggccatgg 567
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>gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23 of 118 of the complete
              sequence
          Length = 241476

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 529    tgatgaagttatttcctttt 548
              ||||||||||||||||||||
Sbjct: 183879 tgatgaagttatttcctttt 183860
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>emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on chromosome 2, complete
             sequence
          Length = 203185

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   acagcaacagagagacagag 244
             ||||||||||||||||||||
Sbjct: 89727 acagcaacagagagacagag 89708


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,712,820
Number of Sequences: 3902068
Number of extensions: 4712820
Number of successful extensions: 123171
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122875
Number of HSP's gapped (non-prelim): 288
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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