ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63l21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188410.1| Oryza sativa (japonica cultivar-group), Ozsa813... 567 e-158
2dbj|AK101456.1| Oryza sativa (japonica cultivar-group) cDNA clon... 567 e-158
3dbj|AK065467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 549 e-153
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
5dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
6ref|NM_117961.1| Arabidopsis thaliana ATP binding / ATP-dependen... 121 3e-24
7emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, ... 72 2e-09
8emb|AL021710.1|ATF28J12 Arabidopsis thaliana DNA chromosome 4, B... 72 2e-09
9ref|XM_459081.1| Debaryomyces hansenii CBS767 hypothetical prote... 54 5e-04
10emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 54 5e-04
11ref|XM_568833.1| Cryptococcus neoformans var. neoformans JEC21 p... 48 0.032
12ref|XM_644076.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box h... 46 0.13
13ref|XM_644588.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box h... 46 0.13
14ref|XM_761447.1| Theileria parva strain Muguga chromosome 1 ATP-... 46 0.13
15ref|XM_674162.1| Plasmodium berghei strain ANKA ATP-dependant RN... 46 0.13
16emb|AL121794.2|SPBC21B10 S.pombe chromosome II cosmid c21B10 46 0.13
17ref|NM_001021581.1| Schizosaccharomyces pombe 972h- hypothetical... 46 0.13
18gb|U48733.1|SPU48733 Schizosaccharomyces pombe RNA-dependent ATP... 46 0.13
19gb|DQ158858.1| Bigelowiella natans nucleomorph chromosome 3, par... 44 0.50
20ref|XM_750013.1| Aspergillus fumigatus Af293 mRNA splicing facto... 44 0.50
21emb|AL772311.19| Mouse DNA sequence from clone RP23-87P16 on chr... 44 0.50
22emb|AL670446.8| Mouse DNA sequence from clone RP23-291H3 on chro... 44 0.50
23gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 2.0
24gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosom... 42 2.0
25ref|XM_717988.1| Candida albicans SC5314 putative spliceosomal D... 42 2.0
26ref|XM_717842.1| Candida albicans SC5314 putative spliceosomal D... 42 2.0
27gb|AC151266.4| Mus musculus BAC clone RP24-279K24 from chromosom... 42 2.0
28ref|XM_722176.1| Plasmodium yoelii yoelii str. 17XNL pre-mRNA sp... 42 2.0
29ref|XM_735023.1| Plasmodium chabaudi chabaudi splicing factor (P... 42 2.0
30gb|AC152886.11| Medicago truncatula clone mth2-84j21, complete s... 42 2.0
31gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 2.0
32emb|AL022328.21|HS402G11 Human DNA sequence from clone RP3-402G1... 42 2.0
33dbj|AK164931.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 42 2.0
34gb|AC025043.7| Homo sapiens chromosome 15 clone RP11-516C1 map 1... 42 2.0
35emb|BX537302.12| Mouse DNA sequence from clone RP23-349I9 on chr... 42 2.0
36ref|XM_674051.1| Plasmodium berghei strain ANKA splicing factor ... 42 2.0
37gb|AF531421.1| Chlamydomonas reinhardtii MOC1 (Moc1) mRNA, compl... 40 7.8
38gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence 40 7.8
39ref|XM_457324.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 7.8
40gb|AC121097.6| Mus musculus chromosome 13, clone RP24-449F13, co... 40 7.8
41ref|XM_750088.1| Aspergillus fumigatus Af293 GTP-binding protein... 40 7.8
42gb|AC117226.3| Mus musculus BAC clone RP23-377C22 from 13, compl... 40 7.8
43gb|AC117217.2| Mus musculus BAC clone RP23-318C3 from 17, comple... 40 7.8
44ref|XM_652481.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box h... 40 7.8
45ref|XM_949052.1| Theileria annulata strain Ankara DEAD-box famil... 40 7.8
46gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complet... 40 7.8
47ref|XM_673245.1| Plasmodium berghei strain ANKA ATP-dependent DE... 40 7.8
48gb|AY375531.1| Bacteriophage 44RR2.8t, complete genome 40 7.8
49emb|Z48622.1|SC9553 S.cerevisiae chromosome XIII cosmid 9553 40 7.8
50emb|X77395.1|SCN201952 S.cerevisiae N2019, N2021, N2023, N2025, ... 40 7.8
51ref|XM_781385.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.8
52emb|CR925988.1| Pongo pygmaeus mRNA; cDNA DKFZp459E1620 (from cl... 40 7.8
53emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 40 7.8
54emb|AL772266.6| Zebrafish DNA sequence from clone CH211-147H1 in... 40 7.8
55emb|AJ318517.1|CPU318517 Claviceps purpurea mk1 gene for MAP kin... 40 7.8
56emb|CR861086.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1115 (from cl... 40 7.8
57gb|AC073548.5| Homo sapiens chromosome 19 clone RP11-43N16, comp... 40 7.8
58ref|NM_001024837.1| Mus musculus adenosine deaminase, RNA-specif... 40 7.8
59ref|NM_130895.2| Mus musculus adenosine deaminase, RNA-specific,... 40 7.8
60ref|NM_001024838.1| Mus musculus adenosine deaminase, RNA-specif... 40 7.8
61ref|NM_001024840.1| Mus musculus adenosine deaminase, RNA-specif... 40 7.8
62ref|NM_001024839.1| Mus musculus adenosine deaminase, RNA-specif... 40 7.8
63gb|AC136143.4| Papio anubis clone rp41-5m22, complete sequence 40 7.8
64gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence 40 7.8
65dbj|AK138318.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 7.8
66dbj|AK141777.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 7.8
67dbj|AK147298.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 7.8
68ref|XM_628252.1| Cryptosporidium parvum Iowa II Prp16p pre-mRNA ... 40 7.8
69ref|XM_396483.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 7.8
70ref|XM_392081.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 7.8
71gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complet... 40 7.8
72gb|AY962392.1| Aeromonas phage 31, complete genome 40 7.8
73dbj|AK110465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
74gb|AC005886.2|AC005886 b240g16, complete sequence 40 7.8
75gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 7.8
76emb|Z71626.1|SCYNR011C S.cerevisiae chromosome XIV reading frame... 40 7.8
77emb|X55999.1|SCPRP2G S. cerevisiae PRP2 gene for pre-RNA process... 40 7.8
78emb|X55936.1|SCPRP2 Yeast PRP2 gene (RNA2 gene) for pre-mRNA spl... 40 7.8
79emb|CR855735.2| Xenopus tropicalis finished cDNA, clone TGas061l01 40 7.8
80dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.8
81dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.8
82gb|AC163630.5| Mus musculus BAC clone RP23-139M2 from chromosome... 40 7.8
83gb|AC173707.2| Mus musculus BAC clone RP23-296A12 from chromosom... 40 7.8
84gb|AC153830.5| Mus musculus 10 BAC RP23-299H19 (Roswell Park Can... 40 7.8
85emb|AL355543.13| Human DNA sequence from clone RP11-86E10 on chr... 40 7.8
86emb|AL844536.13| Mouse DNA sequence from clone RP23-22A15 on chr... 40 7.8 
>ref|NM_188410.1| Oryza sativa (japonica cultivar-group), Ozsa8136 predicted mRNA
          Length = 1542

 Score =  567 bits (286), Expect = e-158
 Identities = 501/572 (87%), Gaps = 3/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggtcggagaagcctagcgcctcgctcgtcgacgatgaggagggcggcgtcctcttcctc 60
           |||||||||||||| |  ||  || ||||||| || ||||||||||||||||||||||| 
Sbjct: 22  gggtcggagaagccgacggcggcgatcgtcgaggacgaggagggcggcgtcctcttcctg 81

                                                                       
Query: 61  ccgaccaacaccagcgcttcctcctcgtcctccgggtttgggtacgcgtccttggagagg 120
           || || | |||||||   |||||||| || ||||||||||||||||||  ||||||| ||
Sbjct: 82  cccacaagcaccagc---tcctcctcctcatccgggtttgggtacgcgagcttggagcgg 138

                                                                       
Query: 121 ctgaggcagcggctgccggtgtacaagtaccgcaaggccatcctctacctggtggagcgg 180
           | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 139 cagcggcagcggctgccggtgtacaagtaccggaaggccatcctctacctggtggagcgg 198

                                                                       
Query: 181 catggtacgaccatcatcgtcggcgagacgggtagcggcaagtccacgcagatccctcag 240
           || |  ||||||||| ||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 199 cacgccacgaccatcgtcgtcggcgagaccggcagcggaaagtccacgcagatccctcag 258

                                                                       
Query: 241 tatcttaaggaggctggttgggctgagggtggtcgacttataggttgcacccagccaaga 300
           || ||||| |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 259 taccttaaagaggctggatgggccgagggtggtcgacttataggctgcactcaaccaaga 318

                                                                       
Query: 301 cgattggctgtgcagacggttgcatcaagagtagctgaagaagttggtgtgaaacttgga 360
           |||||||| |||||| | ||||||||||||||||| |||||||| ||||||| ||| |||
Sbjct: 319 cgattggccgtgcagtcagttgcatcaagagtagcggaagaagtaggtgtgagactcgga 378

                                                                       
Query: 361 gaagaagtaggatatacaataagatttgaggatgaaacaaacccgggcatgaccatgata 420
           |||||||| || || |||||  ||||||||||| ||||||| || || ||||||||||| 
Sbjct: 379 gaagaagttggttacacaatccgatttgaggatcaaacaaatccaggtatgaccatgatt 438

                                                                       
Query: 421 aaatttctcacagatggggtactgattagagaaatgatggaagatcctcttctgagcaaa 480
           |||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||| 
Sbjct: 439 aaatttctgacagatggggtattgatcagagaaatgatggaagatcctcttctgaccaag 498

                                                                       
Query: 481 tatagtgtcattatgatagatgaagctcatgaaagatccatttcaaccgacatattgctg 540
           |||||||| |||||| | |||||||| |||||| ||||||||||||| ||||| ||||||
Sbjct: 499 tatagtgtaattatggttgatgaagcccatgaacgatccatttcaactgacatgttgctg 558

                                           
Query: 541 ggactcttgaaaaagattcaacgccttcggcc 572
           || ||  |||||||||||||||| | ||||||
Sbjct: 559 ggtcttctgaaaaagattcaacgacgtcggcc 590
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>dbj|AK101456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040B09, full
           insert sequence
          Length = 2581

 Score =  567 bits (286), Expect = e-158
 Identities = 501/572 (87%), Gaps = 3/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggtcggagaagcctagcgcctcgctcgtcgacgatgaggagggcggcgtcctcttcctc 60
           |||||||||||||| |  ||  || ||||||| || ||||||||||||||||||||||| 
Sbjct: 103 gggtcggagaagccgacggcggcgatcgtcgaggacgaggagggcggcgtcctcttcctg 162

                                                                       
Query: 61  ccgaccaacaccagcgcttcctcctcgtcctccgggtttgggtacgcgtccttggagagg 120
           || || | |||||||   |||||||| || ||||||||||||||||||  ||||||| ||
Sbjct: 163 cccacaagcaccagc---tcctcctcctcatccgggtttgggtacgcgagcttggagcgg 219

                                                                       
Query: 121 ctgaggcagcggctgccggtgtacaagtaccgcaaggccatcctctacctggtggagcgg 180
           | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 220 cagcggcagcggctgccggtgtacaagtaccggaaggccatcctctacctggtggagcgg 279

                                                                       
Query: 181 catggtacgaccatcatcgtcggcgagacgggtagcggcaagtccacgcagatccctcag 240
           || |  ||||||||| ||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 280 cacgccacgaccatcgtcgtcggcgagaccggcagcggaaagtccacgcagatccctcag 339

                                                                       
Query: 241 tatcttaaggaggctggttgggctgagggtggtcgacttataggttgcacccagccaaga 300
           || ||||| |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 340 taccttaaagaggctggatgggccgagggtggtcgacttataggctgcactcaaccaaga 399

                                                                       
Query: 301 cgattggctgtgcagacggttgcatcaagagtagctgaagaagttggtgtgaaacttgga 360
           |||||||| |||||| | ||||||||||||||||| |||||||| ||||||| ||| |||
Sbjct: 400 cgattggccgtgcagtcagttgcatcaagagtagcggaagaagtaggtgtgagactcgga 459

                                                                       
Query: 361 gaagaagtaggatatacaataagatttgaggatgaaacaaacccgggcatgaccatgata 420
           |||||||| || || |||||  ||||||||||| ||||||| || || ||||||||||| 
Sbjct: 460 gaagaagttggttacacaatccgatttgaggatcaaacaaatccaggtatgaccatgatt 519

                                                                       
Query: 421 aaatttctcacagatggggtactgattagagaaatgatggaagatcctcttctgagcaaa 480
           |||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||| 
Sbjct: 520 aaatttctgacagatggggtattgatcagagaaatgatggaagatcctcttctgaccaag 579

                                                                       
Query: 481 tatagtgtcattatgatagatgaagctcatgaaagatccatttcaaccgacatattgctg 540
           |||||||| |||||| | |||||||| |||||| ||||||||||||| ||||| ||||||
Sbjct: 580 tatagtgtaattatggttgatgaagcccatgaacgatccatttcaactgacatgttgctg 639

                                           
Query: 541 ggactcttgaaaaagattcaacgccttcggcc 572
           || ||  |||||||||||||||| | ||||||
Sbjct: 640 ggtcttctgaaaaagattcaacgacgtcggcc 671
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>dbj|AK065467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020I01, full
           insert sequence
          Length = 2866

 Score =  549 bits (277), Expect = e-153
 Identities = 499/572 (87%), Gaps = 7/572 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggtcggagaagcctagcgcctcgctcgtcgacgatgaggagggcggcgtcctcttcctc 60
           |||||||||||||| |  ||  || ||||||| || ||||||||||||||||||||||| 
Sbjct: 67  gggtcggagaagccgacggcggcgatcgtcgaggacgaggagggcggcgtcctcttcctg 126

                                                                       
Query: 61  ccgaccaacaccagcgcttcctcctcgtcctccgggtttgggtacgcgtccttggagagg 120
           || || | |||||||   |||||||| || ||||||||||||||||||  ||||||| ||
Sbjct: 127 cccacaagcaccagc---tcctcctcctcatccgggtttgggtacgcgagcttggagcgg 183

                                                                       
Query: 121 ctgaggcagcggctgccggtgtacaagtaccgcaaggccatcctctacctggtggagcgg 180
           | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 184 cagcggcagcggctgccggtgtacaagtaccggaaggccatcctctacctggtggagcgg 243

                                                                       
Query: 181 catggtacgaccatcatcgtcggcgagacgggtagcggcaagtccacgcagatccctcag 240
           || |  ||||||||| ||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 244 cacgccacgaccatcgtcgtcggcgagaccggcagcggaaagtccacgcagatccctcag 303

                                                                       
Query: 241 tatcttaaggaggctggttgggctgagggtggtcgacttataggttgcacccagccaaga 300
           || ||||| |||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 304 taccttaaagaggctggatgggccgagggtggtcgacttataggctgcactcaaccaaga 363

                                                                       
Query: 301 cgattggctgtgcagacggttgcatcaagagtagctgaagaagttggtgtgaaacttgga 360
           |||||||| |||||    ||||||||||||||||| |||||||| ||||||| ||| |||
Sbjct: 364 cgattggccgtgca----gttgcatcaagagtagcggaagaagtaggtgtgagactcgga 419

                                                                       
Query: 361 gaagaagtaggatatacaataagatttgaggatgaaacaaacccgggcatgaccatgata 420
           |||||||| || || |||||  ||||||||||| ||||||| || || ||||||||||| 
Sbjct: 420 gaagaagttggttacacaatccgatttgaggatcaaacaaatccaggtatgaccatgatt 479

                                                                       
Query: 421 aaatttctcacagatggggtactgattagagaaatgatggaagatcctcttctgagcaaa 480
           |||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||| 
Sbjct: 480 aaatttctgacagatggggtattgatcagagaaatgatggaagatcctcttctgaccaag 539

                                                                       
Query: 481 tatagtgtcattatgatagatgaagctcatgaaagatccatttcaaccgacatattgctg 540
           |||||||| |||||| | |||||||| |||||| ||||||||||||| ||||| ||||||
Sbjct: 540 tatagtgtaattatggttgatgaagcccatgaacgatccatttcaactgacatgttgctg 599

                                           
Query: 541 ggactcttgaaaaagattcaacgccttcggcc 572
           || ||  |||||||||||||||| | ||||||
Sbjct: 600 ggtcttctgaaaaagattcaacgacgtcggcc 631
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  186 bits (94), Expect = 5e-44
 Identities = 133/146 (91%)
 Strand = Plus / Plus

                                                                           
Query: 95      ggtttgggtacgcgtccttggagaggctgaggcagcggctgccggtgtacaagtaccgca 154
               ||||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| |
Sbjct: 6112120 ggtttgggtacgcgagcttggagcggcagcggcagcggctgccggtgtacaagtaccgga 6112179

                                                                           
Query: 155     aggccatcctctacctggtggagcggcatggtacgaccatcatcgtcggcgagacgggta 214
               |||||||||||||||||||||||||||| |  ||||||||| ||||||||||||| || |
Sbjct: 6112180 aggccatcctctacctggtggagcggcacgccacgaccatcgtcgtcggcgagaccggca 6112239

                                         
Query: 215     gcggcaagtccacgcagatccctcag 240
               |||| |||||||||||||||||||||
Sbjct: 6112240 gcggaaagtccacgcagatccctcag 6112265



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                           
Query: 409     atgaccatgataaaatttctcacagatggggtactgattagagaaatgatggaagatcct 468
               ||||||||||| |||||||| |||||||||||| |||| |||||||||||||||||||||
Sbjct: 6114174 atgaccatgattaaatttctgacagatggggtattgatcagagaaatgatggaagatcct 6114233

                                
Query: 469     cttctgagcaaatatag 485
               ||||||| ||| |||||
Sbjct: 6114234 cttctgaccaagtatag 6114250



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                           
Query: 237     tcagtatcttaaggaggctggttgggctgagggtggtcgacttataggttgcacccagcc 296
               |||||| ||||| |||||||| ||||| |||||||||||||||||||| ||||| || ||
Sbjct: 6113008 tcagtaccttaaagaggctggatgggccgagggtggtcgacttataggctgcactcaacc 6113067

                                  
Query: 297     aagacgattggctgtgcag 315
               |||||||||||| ||||||
Sbjct: 6113068 aagacgattggccgtgcag 6113086



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                           
Query: 319     gttgcatcaagagtagctgaagaagttggtgtgaaacttggagaagaagtaggatataca 378
               ||||||||||||||||| |||||||| ||||||| ||| ||||||||||| || || |||
Sbjct: 6113905 gttgcatcaagagtagcggaagaagtaggtgtgagactcggagaagaagttggttacaca 6113964

                                      
Query: 379     ataagatttgaggatgaaacaaa 401
               ||  ||||||||||| |||||||
Sbjct: 6113965 atccgatttgaggatcaaacaaa 6113987



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                           
Query: 484     agtgtcattatgatagatgaagctcatgaaagatccatttcaaccgacatattgctggga 543
               ||||| |||||| | |||||||| |||||| ||||||||||||| ||||| |||||||| 
Sbjct: 6114508 agtgtaattatggttgatgaagcccatgaacgatccatttcaactgacatgttgctgggt 6114567

                           
Query: 544     ctcttgaaaaag 555
               ||  ||||||||
Sbjct: 6114568 cttctgaaaaag 6114579



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                           
Query: 1       gggtcggagaagcctagcgcctcgctcgtcgacgatgaggagggcggcgtcctcttcctc 60
               |||||||||||||| |  ||  || ||||||| || ||||||||||||||||||||||| 
Sbjct: 6111911 gggtcggagaagccgacggcggcgatcgtcgaggacgaggagggcggcgtcctcttcctg 6111970

                                         
Query: 61      ccgaccaacaccagcgcttcctcctc 86
               || || | ||||||| | ||||||||
Sbjct: 6111971 cccacaagcaccagctcctcctcctc 6111996
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>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0031E09
          Length = 176349

 Score =  186 bits (94), Expect = 5e-44
 Identities = 133/146 (91%)
 Strand = Plus / Plus

                                                                          
Query: 95     ggtttgggtacgcgtccttggagaggctgaggcagcggctgccggtgtacaagtaccgca 154
              ||||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| |
Sbjct: 136477 ggtttgggtacgcgagcttggagcggcagcggcagcggctgccggtgtacaagtaccgga 136536

                                                                          
Query: 155    aggccatcctctacctggtggagcggcatggtacgaccatcatcgtcggcgagacgggta 214
              |||||||||||||||||||||||||||| |  ||||||||| ||||||||||||| || |
Sbjct: 136537 aggccatcctctacctggtggagcggcacgccacgaccatcgtcgtcggcgagaccggca 136596

                                        
Query: 215    gcggcaagtccacgcagatccctcag 240
              |||| |||||||||||||||||||||
Sbjct: 136597 gcggaaagtccacgcagatccctcag 136622



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                          
Query: 409    atgaccatgataaaatttctcacagatggggtactgattagagaaatgatggaagatcct 468
              ||||||||||| |||||||| |||||||||||| |||| |||||||||||||||||||||
Sbjct: 138531 atgaccatgattaaatttctgacagatggggtattgatcagagaaatgatggaagatcct 138590

                               
Query: 469    cttctgagcaaatatag 485
              ||||||| ||| |||||
Sbjct: 138591 cttctgaccaagtatag 138607



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                          
Query: 237    tcagtatcttaaggaggctggttgggctgagggtggtcgacttataggttgcacccagcc 296
              |||||| ||||| |||||||| ||||| |||||||||||||||||||| ||||| || ||
Sbjct: 137365 tcagtaccttaaagaggctggatgggccgagggtggtcgacttataggctgcactcaacc 137424

                                 
Query: 297    aagacgattggctgtgcag 315
              |||||||||||| ||||||
Sbjct: 137425 aagacgattggccgtgcag 137443



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                          
Query: 319    gttgcatcaagagtagctgaagaagttggtgtgaaacttggagaagaagtaggatataca 378
              ||||||||||||||||| |||||||| ||||||| ||| ||||||||||| || || |||
Sbjct: 138262 gttgcatcaagagtagcggaagaagtaggtgtgagactcggagaagaagttggttacaca 138321

                                     
Query: 379    ataagatttgaggatgaaacaaa 401
              ||  ||||||||||| |||||||
Sbjct: 138322 atccgatttgaggatcaaacaaa 138344



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                          
Query: 484    agtgtcattatgatagatgaagctcatgaaagatccatttcaaccgacatattgctggga 543
              ||||| |||||| | |||||||| |||||| ||||||||||||| ||||| |||||||| 
Sbjct: 138865 agtgtaattatggttgatgaagcccatgaacgatccatttcaactgacatgttgctgggt 138924

                          
Query: 544    ctcttgaaaaag 555
              ||  ||||||||
Sbjct: 138925 cttctgaaaaag 138936



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                          
Query: 1      gggtcggagaagcctagcgcctcgctcgtcgacgatgaggagggcggcgtcctcttcctc 60
              |||||||||||||| |  ||  || ||||||| || ||||||||||||||||||||||| 
Sbjct: 136268 gggtcggagaagccgacggcggcgatcgtcgaggacgaggagggcggcgtcctcttcctg 136327

                                        
Query: 61     ccgaccaacaccagcgcttcctcctc 86
              || || | ||||||| | ||||||||
Sbjct: 136328 cccacaagcaccagctcctcctcctc 136353
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>ref|NM_117961.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ RNA
           helicase/ helicase/ nucleic acid binding AT4G18465 mRNA,
           complete cds
          Length = 2115

 Score =  121 bits (61), Expect = 3e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 419 taaaatttctcacagatggggtactgattagagaaatgatggaagatcctcttctgagca 478
           ||||||||||||||||||||||||| ||| |||| |||||||| ||||| ||  |||  |
Sbjct: 428 taaaatttctcacagatggggtactaattcgagagatgatggaggatcccctcttgacaa 487

                                                                       
Query: 479 aatatagtgtcattatgatagatgaagctcatgaaagatccatttcaaccgacatattgc 538
           | |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 488 agtatagtgttattatgatagatgaagctcatgagagatctatttcaactgacattttac 547

                            
Query: 539 tgggactcttgaaaaag 555
           | || ||||| ||||||
Sbjct: 548 tcggtctcttaaaaaag 564



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 107/132 (81%)
 Strand = Plus / Plus

                                                                       
Query: 190 accatcatcgtcggcgagacgggtagcggcaagtccacgcagatccctcagtatcttaag 249
           ||||| ||||| |||||||||||||| || ||  | || ||||| |||||||| || || 
Sbjct: 199 accattatcgttggcgagacgggtagtggtaaaactactcagattcctcagtacctgaaa 258

                                                                       
Query: 250 gaggctggttgggctgagggtggtcgacttataggttgcacccagccaagacgattggct 309
           || ||||| |||||||| || || ||| |||| | |||||| ||||||||||| || |||
Sbjct: 259 gaagctgggtgggctgaaggaggccgagttattgcttgcacacagccaagacgtttagct 318

                       
Query: 310 gtgcagacggtt 321
           || ||| |||||
Sbjct: 319 gtccaggcggtt 330
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>emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 48
          Length = 194143

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                          
Query: 484    agtgtcattatgatagatgaagctcatgaaagatccatttcaaccgacatattgctggga 543
              ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| || || || 
Sbjct: 165520 agtgttattatgatagatgaagctcatgagagatctatttcaactgacattttactcggt 165579

                          
Query: 544    ctcttgaaaaag 555
              ||||| ||||||
Sbjct: 165580 ctcttaaaaaag 165591



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                               
Query: 419    taaaatttctcacagatggggtactgattagagaaatgatggaagatcc 467
              ||||||||||||||||||||||||| ||| |||| |||||||| |||||
Sbjct: 165370 taaaatttctcacagatggggtactaattcgagagatgatggaggatcc 165418
to top
>emb|AL021710.1|ATF28J12 Arabidopsis thaliana DNA chromosome 4, BAC clone F28J12 (ESSAII
             project)
          Length = 110102

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                         
Query: 484   agtgtcattatgatagatgaagctcatgaaagatccatttcaaccgacatattgctggga 543
             ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| || || || 
Sbjct: 57555 agtgttattatgatagatgaagctcatgagagatctatttcaactgacattttactcggt 57614

                         
Query: 544   ctcttgaaaaag 555
             ||||| ||||||
Sbjct: 57615 ctcttaaaaaag 57626



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                              
Query: 419   taaaatttctcacagatggggtactgattagagaaatgatggaagatcc 467
             ||||||||||||||||||||||||| ||| |||| |||||||| |||||
Sbjct: 57405 taaaatttctcacagatggggtactaattcgagagatgatggaggatcc 57453
to top
>ref|XM_459081.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D15158g)
            partial mRNA
          Length = 3444

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 486  tgtcattatgatagatgaagctcatgaaaga 516
            |||||||||| ||||||||||||||||||||
Sbjct: 1797 tgtcattatgttagatgaagctcatgaaaga 1827



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 358  ggagaagaagtaggatatacaataagatttgaggatgaaac 398
            |||||||| |||||||||||||| ||||| |||||| ||||
Sbjct: 1672 ggagaagatgtaggatatacaatcagattcgaggataaaac 1712
to top
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
               hansenii
          Length = 1602771

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 486     tgtcattatgatagatgaagctcatgaaaga 516
               |||||||||| ||||||||||||||||||||
Sbjct: 1164159 tgtcattatgttagatgaagctcatgaaaga 1164129



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 358     ggagaagaagtaggatatacaataagatttgaggatgaaac 398
               |||||||| |||||||||||||| ||||| |||||| ||||
Sbjct: 1164284 ggagaagatgtaggatatacaatcagattcgaggataaaac 1164244
to top
>ref|XM_568833.1| Cryptococcus neoformans var. neoformans JEC21 pre-mRNA splicing
           factor (CNB01640) partial mRNA
          Length = 2180

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 472 ctgagcaaatatagtgtcattatgatagatgaagctcatgaaag 515
           |||||||| || |||||||||||||| ||||| || ||||||||
Sbjct: 484 ctgagcaagtacagtgtcattatgattgatgaggcgcatgaaag 527
to top
>ref|XM_644076.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative
           (336.t00001) partial mRNA
          Length = 2538

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 358 ggagaagaagtaggatatacaataagatttgaggatgaaacaa 400
           |||||||||||||||||||  || |||||||| ||| ||||||
Sbjct: 775 ggagaagaagtaggatatagtattagatttgaagataaaacaa 817
to top
>ref|XM_644588.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative
            (279.t00009) partial mRNA
          Length = 1416

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 358  ggagaagaagtaggatatacaataagatttgaggatgaaacaa 400
            |||||||||||||||||||  || |||||||| ||| ||||||
Sbjct: 1099 ggagaagaagtaggatatagtattagatttgaagataaaacaa 1141
to top
>ref|XM_761447.1| Theileria parva strain Muguga chromosome 1 ATP-dependent RNA
           helicase (TP01_1019) partial mRNA
          Length = 2190

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 367 gtaggatatacaataagatttgaggat 393
           ||||||||||| |||||||||||||||
Sbjct: 469 gtaggatataccataagatttgaggat 495
to top
>ref|XM_674162.1| Plasmodium berghei strain ANKA ATP-dependant RNA helicase,
           (PB000897.02.0) partial mRNA
          Length = 2112

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 367 gtaggatatacaataagatttga 389
           |||||||||||||||||||||||
Sbjct: 382 gtaggatatacaataagatttga 404
to top
>emb|AL121794.2|SPBC21B10 S.pombe chromosome II cosmid c21B10
          Length = 38548

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 486   tgtcattatgatagatgaagctcatgaaaga 516
             ||||||||| ||||||||||| |||||||||
Sbjct: 37932 tgtcattattatagatgaagcccatgaaaga 37962
to top
>ref|NM_001021581.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC19C2.01),
            partial mRNA
          Length = 2218

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 486  tgtcattatgatagatgaagctcatgaaaga 516
            ||||||||| ||||||||||| |||||||||
Sbjct: 1602 tgtcattattatagatgaagcccatgaaaga 1632
to top
>gb|U48733.1|SPU48733 Schizosaccharomyces pombe RNA-dependent ATPase/helicase (cdc28) gene,
            complete cds
          Length = 3326

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 486  tgtcattatgatagatgaagctcatgaaaga 516
            ||||||||| ||||||||||| |||||||||
Sbjct: 1655 tgtcattattatagatgaagcccatgaaaga 1685
to top
>gb|DQ158858.1| Bigelowiella natans nucleomorph chromosome 3, partial sequence
          Length = 98136

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 497   tagatgaagctcatgaaagatc 518
             ||||||||||||||||||||||
Sbjct: 74115 tagatgaagctcatgaaagatc 74136
to top
>ref|XM_750013.1| Aspergillus fumigatus Af293 mRNA splicing factor RNA helicase Cdc28
            (Afu2g07710) partial mRNA
          Length = 3363

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 216  cggcaagtccacgcagatccctcagtatct 245
            ||||||| ||||||||||||| ||||||||
Sbjct: 1497 cggcaagaccacgcagatcccgcagtatct 1526
to top
>emb|AL772311.19| Mouse DNA sequence from clone RP23-87P16 on chromosome 4, complete
             sequence
          Length = 234393

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 391   gatgaaacaaacccgggcatga 412
             ||||||||||||||||||||||
Sbjct: 35548 gatgaaacaaacccgggcatga 35527
to top
>emb|AL670446.8| Mouse DNA sequence from clone RP23-291H3 on chromosome 4, complete
             sequence
          Length = 171444

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 108   gtccttggagaggctgaggcag 129
             ||||||||||||||||||||||
Sbjct: 38580 gtccttggagaggctgaggcag 38559
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 195     catcgtcggcgagacgggtagcggcaagtccac 227
               ||||||||||||| ||||  |||||||||||||
Sbjct: 3258334 catcgtcggcgagtcgggctgcggcaagtccac 3258302



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 195     catcgtcggcgagacgggtagcggcaagtccac 227
               ||||||||||||| ||||  |||||||||||||
Sbjct: 1762788 catcgtcggcgagtcgggctgcggcaagtccac 1762756
to top
>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete
             sequence
          Length = 217187

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 241   tatcttaaggaggctggttgggctgaggg 269
             ||||| |||||||||||| ||||||||||
Sbjct: 39800 tatctgaaggaggctggtggggctgaggg 39828
to top
>ref|XM_717988.1| Candida albicans SC5314 putative spliceosomal DEAD box ATPase
            (CaO19_5865), mRNA
          Length = 2598

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 476  gcaaatatagtgtcattatgatagatgaagctcatgaaaga 516
            ||||||||  || ||| ||||| ||||||||||||||||||
Sbjct: 1028 gcaaatattctgccataatgattgatgaagctcatgaaaga 1068
to top
>ref|XM_717842.1| Candida albicans SC5314 putative spliceosomal DEAD box ATPase
            (CaO19_13287), mRNA
          Length = 2598

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 476  gcaaatatagtgtcattatgatagatgaagctcatgaaaga 516
            ||||||||  || ||| ||||| ||||||||||||||||||
Sbjct: 1028 gcaaatattctgccataatgattgatgaagctcatgaaaga 1068
to top
>gb|AC151266.4| Mus musculus BAC clone RP24-279K24 from chromosome 17, complete
           sequence
          Length = 171074

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 241 tatcttaaggaggctggttgggctgaggg 269
           ||||| |||||||||||| ||||||||||
Sbjct: 124 tatctgaaggaggctggtggggctgaggg 96
to top
>ref|XM_722176.1| Plasmodium yoelii yoelii str. 17XNL pre-mRNA splicing factor
            ATP-dependent RNA helicase (PY00835) partial mRNA
          Length = 3513

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 478  aaatatagtgtcattatgatagatgaagctcatgaaagatc 518
            ||||||||||| ||||| || ||||| || |||||||||||
Sbjct: 1723 aaatatagtgttattattatggatgaggcacatgaaagatc 1763
to top
>ref|XM_735023.1| Plasmodium chabaudi chabaudi splicing factor (PC301114.00.0)
           partial mRNA
          Length = 1560

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 478 aaatatagtgtcattatgatagatgaagctcatgaaagatc 518
           ||||||||||| ||||| || ||||| || |||||||||||
Sbjct: 7   aaatatagtgttattattatggatgaggcacatgaaagatc 47
to top
>gb|AC152886.11| Medicago truncatula clone mth2-84j21, complete sequence
          Length = 95367

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 410   tgaccatgataaaatttctca 430
             |||||||||||||||||||||
Sbjct: 32181 tgaccatgataaaatttctca 32161
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 197     tcgtcggcgagacgggtagcggcaagtccacgc 229
               ||||||||||  ||||| |||||||||||||||
Sbjct: 2527353 tcgtcggcgaatcgggttgcggcaagtccacgc 2527385
to top
>emb|AL022328.21|HS402G11 Human DNA sequence from clone RP3-402G11 on chromosome 22q13.31-13.33
              Contains the MAPK12 gene for mitogen activated protein
              kinase 12 (SAPK3), the MAPK11 gene for mitogen activated
              protein kinase 11 (PRKM11), gene KIAA0315, the gene for a
              novel protein similar to KIAA0901 and mouse histone
              deacetylase MHDA2, the gene for a novel protein similar to
              Xenopus gamma-tubulin interacting protein (yeast SPC98
              homolog), the gene for a novel protein similar to yeast and
              bacterial predicted proteins, the gene for a novel protein
              similar to C. elegans F38A5.2, the gene for a novel protein
              similar to MRS1 and the gene for a novel protein similar to
              mouse MOV10 (GB110) and yeast and plant predicted proteins.
              Contains ESTs, GSSs and fifteen putative CpG islands,
              complete sequence
          Length = 177241

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 445    attagagaaatgatggaagat 465
              |||||||||||||||||||||
Sbjct: 130081 attagagaaatgatggaagat 130101
to top
>dbj|AK164931.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030028L10 product:adenosine deaminase,
           RNA-specific, B1, full insert sequence
          Length = 3291

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 115 gagaggctgaggcagcggctg 135
           |||||||||||||||||||||
Sbjct: 1   gagaggctgaggcagcggctg 21
to top
>gb|AC025043.7| Homo sapiens chromosome 15 clone RP11-516C1 map 15q15, complete sequence
          Length = 177028

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 109    tccttggagaggctgaggcag 129
              |||||||||||||||||||||
Sbjct: 116966 tccttggagaggctgaggcag 116946
to top
>emb|BX537302.12| Mouse DNA sequence from clone RP23-349I9 on chromosome 7, complete
             sequence
          Length = 214393

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   ccttggagaggctgaggcagc 130
             |||||||||||||||||||||
Sbjct: 57603 ccttggagaggctgaggcagc 57623
to top
>ref|XM_674051.1| Plasmodium berghei strain ANKA splicing factor (PB000761.01.0),
            partial mRNA
          Length = 3405

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 478  aaatatagtgtcattatgatagatgaagctcatgaaagatc 518
            ||||||||||| ||||| || ||||| || |||||||||||
Sbjct: 1723 aaatatagtgttattattatggatgaggcacatgaaagatc 1763
to top
>gb|AF531421.1| Chlamydomonas reinhardtii MOC1 (Moc1) mRNA, complete cds
          Length = 1122

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  cagcgcttcctcctcgtcctccgg 95
           |||| |||||||||||||||||||
Sbjct: 717 cagctcttcctcctcgtcctccgg 740
to top
>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence
          Length = 82723

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   agaggctgaggcagcggctg 135
             ||||||||||||||||||||
Sbjct: 80316 agaggctgaggcagcggctg 80335
to top
>ref|XM_457324.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B08459g)
            partial mRNA
          Length = 2706

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 493  atgatagatgaagctcatgaaaga 516
            ||||| ||||||||||||||||||
Sbjct: 1132 atgattgatgaagctcatgaaaga 1155
to top
>gb|AC121097.6| Mus musculus chromosome 13, clone RP24-449F13, complete sequence
          Length = 217251

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   caagagtagctgaagaagtt 345
             ||||||||||||||||||||
Sbjct: 77415 caagagtagctgaagaagtt 77434
to top
>ref|XM_750088.1| Aspergillus fumigatus Af293 GTP-binding protein Bud4 (Afu2g08470)
           partial mRNA
          Length = 4230

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 39  ggagggcggcgtcctcttcctccc 62
           |||| |||||||||||||||||||
Sbjct: 961 ggagagcggcgtcctcttcctccc 984
to top
>gb|AC117226.3| Mus musculus BAC clone RP23-377C22 from 13, complete sequence
          Length = 169858

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    caagagtagctgaagaagtt 345
              ||||||||||||||||||||
Sbjct: 129336 caagagtagctgaagaagtt 129355
to top
>gb|AC117217.2| Mus musculus BAC clone RP23-318C3 from 17, complete sequence
          Length = 199711

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   ctcttctgagcaaatatagt 486
             ||||||||||||||||||||
Sbjct: 94108 ctcttctgagcaaatatagt 94127
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>ref|XM_652481.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative
           (1.t00062) partial mRNA
          Length = 2436

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 493 atgatagatgaagctcatgaaaga 516
           |||||||||||||| |||||||||
Sbjct: 886 atgatagatgaagcacatgaaaga 909
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>ref|XM_949052.1| Theileria annulata strain Ankara DEAD-box family helicase (TA03020)
            partial mRNA
          Length = 2838

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 199  gtcggcgagacgggtagcggcaagtccacgcagatccctcagta 242
            ||||||||||| |||||||| ||| | || |||||||| |||||
Sbjct: 973  gtcggcgagactggtagcggtaagacaactcagatcccgcagta 1016
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>gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complete sequence
          Length = 200807

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   cttggagaggctgaggcagc 130
             ||||||||||||||||||||
Sbjct: 75740 cttggagaggctgaggcagc 75721
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>ref|XM_673245.1| Plasmodium berghei strain ANKA ATP-dependent DEAD box helicase,
            (PB000179.03.0) partial mRNA
          Length = 4266

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 478  aaatatagtgtcattatgatagatgaagctcatgaa 513
            ||||||||| |||| ||  |||||||||||||||||
Sbjct: 1246 aaatatagtatcataatattagatgaagctcatgaa 1281
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>gb|AY375531.1| Bacteriophage 44RR2.8t, complete genome
          Length = 173591

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    agatgaagctcatgaaagat 517
              ||||||||||||||||||||
Sbjct: 118978 agatgaagctcatgaaagat 118997
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>emb|Z48622.1|SC9553 S.cerevisiae chromosome XIII cosmid 9553
          Length = 16279

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 489  cattatgatagatgaagctcatgaaaga 516
            |||||| ||||||||||| |||||||||
Sbjct: 6350 cattatcatagatgaagcacatgaaaga 6377
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>emb|X77395.1|SCN201952 S.cerevisiae N2019, N2021, N2023, N2025, N2027, N2031, N2048 and N2050
             genes
          Length = 23901

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 490   attatgatagatgaagctcatgaa 513
             |||||||| |||||||||||||||
Sbjct: 17283 attatgattgatgaagctcatgaa 17260
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>ref|XM_781385.1| PREDICTED: Strongylocentrotus purpuratus similar to DEAH
            (Asp-Glu-Ala-His) box polypeptide 38 (LOC581380), mRNA
          Length = 3576

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 499  gatgaagctcatgaaagatc 518
            ||||||||||||||||||||
Sbjct: 1846 gatgaagctcatgaaagatc 1865
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>emb|CR925988.1| Pongo pygmaeus mRNA; cDNA DKFZp459E1620 (from clone DKFZp459E1620)
          Length = 2411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 gaggctgaggcagcggctgc 136
           ||||||||||||||||||||
Sbjct: 71  gaggctgaggcagcggctgc 90
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
              hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 493    atgatagatgaagctcatgaaaga 516
              ||||| ||||||||||||||||||
Sbjct: 681132 atgattgatgaagctcatgaaaga 681155
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>emb|AL772266.6| Zebrafish DNA sequence from clone CH211-147H1 in linkage group 12
              Contains a novel gene similar to mouse Grid2ip (ionotropic
              glutamate receptor delta 2 (Grid2) interacting protein 1),
              a novel gene similar to zebrafish pim1, a novel gene
              similar to vertebrate RGS9 (regulator of G-protein
              signalling 9) and two CpG islands, complete sequence
          Length = 179911

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    aagaagttggtgtgaaactt 357
              ||||||||||||||||||||
Sbjct: 178122 aagaagttggtgtgaaactt 178141
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>emb|AJ318517.1|CPU318517 Claviceps purpurea mk1 gene for MAP kinase 1, exons 1-4
          Length = 6872

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gcaagtccacgcagatccct 237
           ||||||||||||||||||||
Sbjct: 303 gcaagtccacgcagatccct 322
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>emb|CR861086.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1115 (from clone DKFZp459J1115)
          Length = 2382

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 gaggctgaggcagcggctgc 136
           ||||||||||||||||||||
Sbjct: 39  gaggctgaggcagcggctgc 58
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>gb|AC073548.5| Homo sapiens chromosome 19 clone RP11-43N16, complete sequence
          Length = 167722

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    cctcttcctcccgaccaacaccag 74
             ||||||||||||| ||||||||||
Sbjct: 81515 cctcttcctcccgcccaacaccag 81538
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>ref|NM_001024837.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 2, mRNA
          Length = 6619

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 agaggctgaggcagcggctg 135
           ||||||||||||||||||||
Sbjct: 36  agaggctgaggcagcggctg 55
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>ref|NM_130895.2| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 1, mRNA
          Length = 6589

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 agaggctgaggcagcggctg 135
           ||||||||||||||||||||
Sbjct: 36  agaggctgaggcagcggctg 55
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>ref|NM_001024838.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 3, mRNA
          Length = 6662

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 agaggctgaggcagcggctg 135
           ||||||||||||||||||||
Sbjct: 36  agaggctgaggcagcggctg 55
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>ref|NM_001024840.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 4, mRNA
          Length = 6665

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 agaggctgaggcagcggctg 135
           ||||||||||||||||||||
Sbjct: 36  agaggctgaggcagcggctg 55
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>ref|NM_001024839.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 5, mRNA
          Length = 6635

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 agaggctgaggcagcggctg 135
           ||||||||||||||||||||
Sbjct: 36  agaggctgaggcagcggctg 55
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>gb|AC136143.4| Papio anubis clone rp41-5m22, complete sequence
          Length = 186148

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 534    attgctgggactcttgaaaa 553
              ||||||||||||||||||||
Sbjct: 129413 attgctgggactcttgaaaa 129394
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>gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence
          Length = 204007

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    attgctgggactcttgaaaa 553
              ||||||||||||||||||||
Sbjct: 179474 attgctgggactcttgaaaa 179493
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>dbj|AK138318.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230065F14 product:adenosine
           deaminase, RNA-specific, B1, full insert sequence
          Length = 2578

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 agaggctgaggcagcggctg 135
           ||||||||||||||||||||
Sbjct: 29  agaggctgaggcagcggctg 48
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>dbj|AK141777.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030063D19 product:adenosine
           deaminase, RNA-specific, B1, full insert sequence
          Length = 3016

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 agaggctgaggcagcggctg 135
           ||||||||||||||||||||
Sbjct: 8   agaggctgaggcagcggctg 27
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>dbj|AK147298.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M5C1010E10 product:adenosine deaminase,
           RNA-specific, B1, full insert sequence
          Length = 6664

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 agaggctgaggcagcggctg 135
           ||||||||||||||||||||
Sbjct: 35  agaggctgaggcagcggctg 54
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>ref|XM_628252.1| Cryptosporidium parvum Iowa II Prp16p pre-mRNA splicing factor. HrpA
            family SFII helicase (cgd7_640), partial mRNA
          Length = 3129

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 481  tatagtgtcattatgatagatgaagctcatgaaaga 516
            |||||||  ||||| || ||||||||||||||||||
Sbjct: 1297 tatagtgctattataatggatgaagctcatgaaaga 1332
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>ref|XM_396483.2| PREDICTED: Apis mellifera similar to ENSANGP00000018360 (LOC413032),
            mRNA
          Length = 3627

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  agtagctgaagaagttggtg 349
            ||||||||||||||||||||
Sbjct: 3093 agtagctgaagaagttggtg 3112
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>ref|XM_392081.2| PREDICTED: Apis mellifera similar to ENSANGP00000021966
           (LOC408535), mRNA
          Length = 2611

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 497 tagatgaagctcatgaaaga 516
           ||||||||||||||||||||
Sbjct: 617 tagatgaagctcatgaaaga 636
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>gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complete sequence
          Length = 172574

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   ggaggctggttgggctgagg 268
             ||||||||||||||||||||
Sbjct: 72747 ggaggctggttgggctgagg 72728
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>gb|AY962392.1| Aeromonas phage 31, complete genome
          Length = 172963

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    agatgaagctcatgaaagat 517
              ||||||||||||||||||||
Sbjct: 118739 agatgaagctcatgaaagat 118758
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>dbj|AK110465.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-G05, full
            insert sequence
          Length = 3365

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   cgacgatgaggagggcggcg 49
            ||||||||||||||||||||
Sbjct: 1154 cgacgatgaggagggcggcg 1135
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>gb|AC005886.2|AC005886 b240g16, complete sequence
          Length = 134011

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   ggttgcacccagccaagacg 302
             ||||||||||||||||||||
Sbjct: 15822 ggttgcacccagccaagacg 15803
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 319     gttgcatcaagagtagctgaagaa 342
               |||||||||||||| |||||||||
Sbjct: 2346055 gttgcatcaagagtggctgaagaa 2346078
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>emb|Z71626.1|SCYNR011C S.cerevisiae chromosome XIV reading frame ORF YNR011c
          Length = 3238

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 490  attatgatagatgaagctcatgaa 513
            |||||||| |||||||||||||||
Sbjct: 1731 attatgattgatgaagctcatgaa 1708
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>emb|X55999.1|SCPRP2G S. cerevisiae PRP2 gene for pre-RNA processing protein
          Length = 3177

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 490  attatgatagatgaagctcatgaa 513
            |||||||| |||||||||||||||
Sbjct: 1230 attatgattgatgaagctcatgaa 1253
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>emb|X55936.1|SCPRP2 Yeast PRP2 gene (RNA2 gene) for pre-mRNA splicing factor
          Length = 3177

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 490  attatgatagatgaagctcatgaa 513
            |||||||| |||||||||||||||
Sbjct: 1230 attatgattgatgaagctcatgaa 1253
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>emb|CR855735.2| Xenopus tropicalis finished cDNA, clone TGas061l01
          Length = 2350

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 497 tagatgaagctcatgaaaga 516
           ||||||||||||||||||||
Sbjct: 616 tagatgaagctcatgaaaga 635
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>dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7_A, complete
             sequence
          Length = 118828

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 114   ggagaggctgaggcagcggctgccggtg 141
             ||||||| |||||||| |||||||||||
Sbjct: 65450 ggagaggatgaggcaggggctgccggtg 65477
to top
>dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7, complete
             sequence
          Length = 150474

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 114   ggagaggctgaggcagcggctgccggtg 141
             ||||||| |||||||| |||||||||||
Sbjct: 65450 ggagaggatgaggcaggggctgccggtg 65477
to top
>gb|AC163630.5| Mus musculus BAC clone RP23-139M2 from chromosome 16, complete sequence
          Length = 231703

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 439    gtactgattagagaaatgatggaa 462
              |||||||||||||||||| |||||
Sbjct: 212925 gtactgattagagaaatggtggaa 212948
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>gb|AC173707.2| Mus musculus BAC clone RP23-296A12 from chromosome 16, complete
             sequence
          Length = 171458

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 439   gtactgattagagaaatgatggaa 462
             |||||||||||||||||| |||||
Sbjct: 77021 gtactgattagagaaatggtggaa 76998
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>gb|AC153830.5| Mus musculus 10 BAC RP23-299H19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200647

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    agaggctgaggcagcggctg 135
              ||||||||||||||||||||
Sbjct: 151798 agaggctgaggcagcggctg 151817
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>emb|AL355543.13| Human DNA sequence from clone RP11-86E10 on chromosome 10 Contains the
             ADRB1 gene for adrenergic beta-1- receptor, a
             ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1)
             pseudogene, the gene for CTCL tumor antigen L14-2
             (FLJ10188 DKFZp762M1412 FLJ32946 FLJ37179 FLJ21086
             FLJ32946 FLJ35301), the 5' end of the TDRD1 gene for tudor
             domain containing 1 and three CpG islands, complete
             sequence
          Length = 179009

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   ggttgcacccagccaagacg 302
             ||||||||||||||||||||
Sbjct: 46137 ggttgcacccagccaagacg 46156
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>emb|AL844536.13| Mouse DNA sequence from clone RP23-22A15 on chromosome 2, complete
              sequence
          Length = 245993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    ccttggagaggctgaggcag 129
              ||||||||||||||||||||
Sbjct: 155349 ccttggagaggctgaggcag 155368


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,966,439
Number of Sequences: 3902068
Number of extensions: 5966439
Number of successful extensions: 166224
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 165890
Number of HSP's gapped (non-prelim): 325
length of query: 573
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 550
effective length of database: 17,143,297,704
effective search space: 9428813737200
effective search space used: 9428813737200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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