Clone Name | bah63m21 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 978 Score = 549 bits (277), Expect = e-153 Identities = 439/493 (89%) Strand = Plus / Plus Query: 145 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcttggataaatttggtgctg 204 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 215 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttggataaatttggagctg 274 Query: 205 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 264 |||||||| ||||||||||||| ||||| || |||||||||||| |||| || || || | Sbjct: 275 ctatggcacttgtgaagagtgacattggtggtaatatcacgaggctggaaaataaatatt 334 Query: 265 cctcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 324 | ||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| | Sbjct: 335 cttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaaca 394 Query: 325 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 384 |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 395 agactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagggctatgg 454 Query: 385 acttccttgttgaactgttccgtaatctgcttgaccatccagactggactatgagtcaag 444 |||||||||||||| | |||||||| |||||||| |||| |||||||||||||||||||| Sbjct: 455 acttccttgttgaattattccgtaacctgcttgagcatcaagactggactatgagtcaag 514 Query: 445 catgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagctcca 504 | |||||||||||||| || ||||||||||||||||||||||| ||||| ||||| || | Sbjct: 515 cttgtactgattcatataccaaaactctgaagaaatggcatggttggcttgccagttcta 574 Query: 505 gttttacggttgctatgaagcttgctcctaacaaagataaatttatggaggtaattagcg 564 ||||||| || || ||||||||||||||||| | ||| |||||||||||||| ||||| | Sbjct: 575 gttttacagtggcaatgaagcttgctcctaatagagagaaatttatggaggtcattagtg 634 Query: 565 gaacgggtgacatcaaagcagacattgagaaattctgcaccaccttttatccctttctca 624 ||||||||||||| ||||| || || |||||||||||||| |||||||| || ||||||| Sbjct: 635 gaacgggtgacataaaagctgatatcgagaaattctgcacgaccttttacccttttctca 694 Query: 625 aggagaatcatga 637 | ||||||||||| Sbjct: 695 aagagaatcatga 707
>dbj|AK061679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H10, full insert sequence Length = 978 Score = 541 bits (273), Expect = e-151 Identities = 438/493 (88%) Strand = Plus / Plus Query: 145 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcttggataaatttggtgctg 204 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 215 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttggataaatttggagctg 274 Query: 205 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 264 |||||||| ||||||||||||| ||||| || |||||||||||| |||| || || || | Sbjct: 275 ctatggcacttgtgaagagtgacattggtggtaatatcacgaggctggaaaataaatatt 334 Query: 265 cctcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 324 | ||||||||| ||||||||||||| ||||||| |||||| || ||||| | | |||| | Sbjct: 335 cttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggctcaaaaca 394 Query: 325 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 384 |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 395 agactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagggctatgg 454 Query: 385 acttccttgttgaactgttccgtaatctgcttgaccatccagactggactatgagtcaag 444 |||||||||||||| | |||||||| |||||||| |||| |||||||||||||||||||| Sbjct: 455 acttccttgttgaattattccgtaacctgcttgagcatcaagactggactatgagtcaag 514 Query: 445 catgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagctcca 504 | |||||||||||||| || ||||||||||||||||||||||| ||||| ||||| || | Sbjct: 515 cttgtactgattcatataccaaaactctgaagaaatggcatggttggcttgccagttcta 574 Query: 505 gttttacggttgctatgaagcttgctcctaacaaagataaatttatggaggtaattagcg 564 ||||||| || || ||||||||||||||||| | ||| |||||||||||||| ||||| | Sbjct: 575 gttttacagtggcaatgaagcttgctcctaatagagagaaatttatggaggtcattagtg 634 Query: 565 gaacgggtgacatcaaagcagacattgagaaattctgcaccaccttttatccctttctca 624 ||||||||||||| ||||| || || |||||||||||||| |||||||| || ||||||| Sbjct: 635 gaacgggtgacataaaagctgatatcgagaaattctgcacgaccttttacccttttctca 694 Query: 625 aggagaatcatga 637 | ||||||||||| Sbjct: 695 aagagaatcatga 707
>gb|BT024039.1| Zea mays clone EL01N0429A01 mRNA sequence Length = 807 Score = 456 bits (230), Expect = e-125 Identities = 425/490 (86%) Strand = Plus / Plus Query: 145 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcttggataaatttggtgctg 204 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 28 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcctggataaatttggagctg 87 Query: 205 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 264 ||||||||||||| |||| |||||| | || |||||||| ||| |||| |||||||| | Sbjct: 88 ctatggcaattgtaaagaatgatatcagcggcaatatcacaaggctggaaaacaagtatt 147 Query: 265 cctcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 324 | ||||| ||| |||| |||| |||||||||| |||||| || ||||||||| |||| | Sbjct: 148 cttcagatccatcaaagtatggacacttgtacagcatggttcaggaagaagttcaaaaca 207 Query: 325 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 384 ||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 208 agaccgcgaaaggttcctcaagctgcacaaatggtcttctgtggctcacgagggccatgg 267 Query: 385 acttccttgttgaactgttccgtaatctgcttgaccatccagactggactatgagtcaag 444 | ||||||||||| |||||||||| |||||||| |||||||||||||| |||| ||||| Sbjct: 268 atttccttgttgagttgttccgtaacctgcttgagcatccagactggaccatgactcaag 327 Query: 445 catgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagctcca 504 | || |||||||||||||| || || |||||||||| ||||||||||| ||||| || | Sbjct: 328 cttgcactgattcatacaccaagaccctgaagaaatttcatggctggcttgccagttcta 387 Query: 505 gttttacggttgctatgaagcttgctcctaacaaagataaatttatggaggtaattagcg 564 |||||||||| || |||||||| ||||||| | ||||||||| |||||||| ||||| | Sbjct: 388 gttttacggtggccatgaagctctctcctaatagagataaattcatggaggtcattagtg 447 Query: 565 gaacgggtgacatcaaagcagacattgagaaattctgcaccaccttttatccctttctca 624 |||| ||||| ||||| ||||| ||||||||||| ||||| ||||| | ||| ||||||| Sbjct: 448 gaactggtgatatcaatgcagatattgagaaattttgcacaaccttctctccttttctca 507 Query: 625 aggagaatca 634 | || ||||| Sbjct: 508 aagaaaatca 517
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 170 bits (86), Expect = 4e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 375 agggccatggacttccttgttgaactgttccgtaatctgcttgaccatccagactggact 434 ||||| |||||||||||||||||| | |||||||| |||||||| |||| |||||||||| Sbjct: 24801074 agggctatggacttccttgttgaattattccgtaacctgcttgagcatcaagactggact 24801133 Query: 435 atgagtcaagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctc 494 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 24801134 atgagtcaagcttgtactgattcatataccaaaactctgaagaaatggcatggttggctt 24801193 Query: 495 gccagctccagttttacggttg 516 ||||| || |||||||| |||| Sbjct: 24801194 gccagttctagttttacagttg 24801215 Score = 133 bits (67), Expect = 8e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 519 atgaagcttgctcctaacaaagataaatttatggaggtaattagcggaacgggtgacatc 578 ||||||||||||||||| | ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 24801632 atgaagcttgctcctaatagagagaaatttatggaggtcattagtggaacgggtgacata 24801691 Query: 579 aaagcagacattgagaaattctgcaccaccttttatccctttctcaaggagaatcatga 637 ||||| || || |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 24801692 aaagctgatatcgagaaattctgcacgaccttttacccttttctcaaagagaatcatga 24801750 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 267 tcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaagaag 326 ||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| ||| Sbjct: 24800885 tcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaacaag 24800944 Query: 327 accgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 377 || ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 24800945 actgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 24800995 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 189 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 245 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 24800596 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 24800652 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 145 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcttgg 189 |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 24800032 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 24800076 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ctaacaaagataaatttatg 551 |||||||||||||||||||| Sbjct: 30753996 ctaacaaagataaatttatg 30753977
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1234_B11 Length = 128095 Score = 170 bits (86), Expect = 4e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 375 agggccatggacttccttgttgaactgttccgtaatctgcttgaccatccagactggact 434 ||||| |||||||||||||||||| | |||||||| |||||||| |||| |||||||||| Sbjct: 100722 agggctatggacttccttgttgaattattccgtaacctgcttgagcatcaagactggact 100781 Query: 435 atgagtcaagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctc 494 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 100782 atgagtcaagcttgtactgattcatataccaaaactctgaagaaatggcatggttggctt 100841 Query: 495 gccagctccagttttacggttg 516 ||||| || |||||||| |||| Sbjct: 100842 gccagttctagttttacagttg 100863 Score = 133 bits (67), Expect = 8e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 519 atgaagcttgctcctaacaaagataaatttatggaggtaattagcggaacgggtgacatc 578 ||||||||||||||||| | ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 101280 atgaagcttgctcctaatagagagaaatttatggaggtcattagtggaacgggtgacata 101339 Query: 579 aaagcagacattgagaaattctgcaccaccttttatccctttctcaaggagaatcatga 637 ||||| || || |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 101340 aaagctgatatcgagaaattctgcacgaccttttacccttttctcaaagagaatcatga 101398 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 267 tcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaagaag 326 ||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| ||| Sbjct: 100533 tcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaacaag 100592 Query: 327 accgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 377 || ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 100593 actgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 100643 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 189 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 245 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 100244 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 100300 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 145 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcttgg 189 |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 99680 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 99724
>dbj|AP006846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa283G08 Length = 38265 Score = 170 bits (86), Expect = 4e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 375 agggccatggacttccttgttgaactgttccgtaatctgcttgaccatccagactggact 434 ||||| |||||||||||||||||| | |||||||| |||||||| |||| |||||||||| Sbjct: 4438 agggctatggacttccttgttgaattattccgtaacctgcttgagcatcaagactggact 4497 Query: 435 atgagtcaagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctc 494 ||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 4498 atgagtcaagcttgtactgattcatataccaaaactctgaagaaatggcatggttggctt 4557 Query: 495 gccagctccagttttacggttg 516 ||||| || |||||||| |||| Sbjct: 4558 gccagttctagttttacagttg 4579 Score = 133 bits (67), Expect = 8e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 519 atgaagcttgctcctaacaaagataaatttatggaggtaattagcggaacgggtgacatc 578 ||||||||||||||||| | ||| |||||||||||||| ||||| |||||||||||||| Sbjct: 4996 atgaagcttgctcctaatagagagaaatttatggaggtcattagtggaacgggtgacata 5055 Query: 579 aaagcagacattgagaaattctgcaccaccttttatccctttctcaaggagaatcatga 637 ||||| || || |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 5056 aaagctgatatcgagaaattctgcacgaccttttacccttttctcaaagagaatcatga 5114 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 267 tcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaagaag 326 ||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| ||| Sbjct: 4249 tcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaacaag 4308 Query: 327 accgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 377 || ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 4309 actgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 4359 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 189 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 245 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 3960 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 4016 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 145 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcttgg 189 |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 3396 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 3440
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 189 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 246 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 16231165 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 16231108
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1104G07 Length = 119643 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 189 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 246 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 21343 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 21286
>dbj|AK102838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109M01, full insert sequence Length = 2519 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 189 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 246 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 1837 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 1894
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 189 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 245 ||||||||| | |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 21531134 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 21531190 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 201 gctgctatggcaattgtgaagagtg 225 |||||||||||| |||||||||||| Sbjct: 13742624 gctgctatggcacttgtgaagagtg 13742600
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 189 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 245 ||||||||| | |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 88318 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 88374
>ref|NM_201859.1| Arabidopsis thaliana unknown protein AT2G33470 transcript variant AT2G33470.2 mRNA, complete cds Length = 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 441 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 500 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 443 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 502 Query: 501 tc 502 || Sbjct: 503 tc 504 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 174 atcttgcctgtcttggataaatttggtgctgctatg 209 ||||||||||| | ||||||||||| ||||||||| Sbjct: 176 atcttgcctgttatagataaatttggagctgctatg 211
>ref|NM_128907.2| Arabidopsis thaliana unknown protein AT2G33470 transcript variant AT2G33470.1 mRNA, complete cds Length = 981 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 441 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 500 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 559 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 618 Query: 501 tc 502 || Sbjct: 619 tc 620 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 174 atcttgcctgtcttggataaatttggtgctgctatg 209 ||||||||||| | ||||||||||| ||||||||| Sbjct: 292 atcttgcctgttatagataaatttggagctgctatg 327
>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete sequence Length = 152593 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 441 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 500 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 80885 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 80826 Query: 501 tc 502 || Sbjct: 80825 tc 80824
>gb|BT005674.1| Arabidopsis thaliana clone U50148 unknown protein (At2g33470) mRNA, complete cds Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 441 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 500 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 370 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 429 Query: 501 tc 502 || Sbjct: 430 tc 431 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 174 atcttgcctgtcttggataaatttggtgctgctatg 209 ||||||||||| | ||||||||||| ||||||||| Sbjct: 103 atcttgcctgttatagataaatttggagctgctatg 138
>gb|BT004207.1| Arabidopsis thaliana clone RAFL15-28-H11 (R50148) unknown protein (At2g33470) mRNA, complete cds Length = 893 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 441 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 500 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 463 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 522 Query: 501 tc 502 || Sbjct: 523 tc 524 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 174 atcttgcctgtcttggataaatttggtgctgctatg 209 ||||||||||| | ||||||||||| ||||||||| Sbjct: 196 atcttgcctgttatagataaatttggagctgctatg 231
>gb|AY085884.1| Arabidopsis thaliana clone 19302 mRNA, complete sequence Length = 945 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 441 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggctcgccagc 500 ||||| ||| |||| |||||| |||||| || ||||||||||| || |||||||||||| Sbjct: 557 caagcttgtgctgactcataccaaaaaacactcaagaaatggcacggatggctcgccagc 616 Query: 501 tc 502 || Sbjct: 617 tc 618 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 174 atcttgcctgtcttggataaatttggtgctgctatg 209 ||||||||||| | ||||||||||| ||||||||| Sbjct: 290 atcttgcctgttatagataaatttggagctgctatg 325
>ref|NM_187035.1| Oryza sativa (japonica cultivar-group), mRNA Length = 609 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Plus Query: 465 aaaactctgaagaaatggcatggctggctcgccagctccagttttacggttgctatgaag 524 |||||||| ||||||||||| || ||||| || || || || ||| ||||||| || ||| Sbjct: 394 aaaactctcaagaaatggcacggatggctggcgagttcaagcttttcggttgccataaag 453 Query: 525 cttgctcc 532 |||||||| Sbjct: 454 cttgctcc 461 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 378 gccatggacttccttgttgaactgttccgtaat 410 |||||||||||||| |||| |||||||| |||| Sbjct: 307 gccatggacttcctggttgcactgttccataat 339
>ref|NM_179950.1| Arabidopsis thaliana ATP binding / microtubule motor AT2G37420 mRNA, complete cds Length = 3429 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 caagaagaagttgaaaagaag 326 ||||||||||||||||||||| Sbjct: 1443 caagaagaagttgaaaagaag 1463
>gb|AC120404.25| Mus musculus chromosome 6, clone RP24-405O23, complete sequence Length = 202146 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 tatgagcacttgtacaccatg 302 ||||||||||||||||||||| Sbjct: 98463 tatgagcacttgtacaccatg 98483
>gb|AC133089.4| Mus musculus BAC clone RP24-165M3 from chromosome 19, complete sequence Length = 149637 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 gtccaagaagaagttgaaaag 323 ||||||||||||||||||||| Sbjct: 81861 gtccaagaagaagttgaaaag 81841
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 gtccaagaagaagttgaaaag 323 ||||||||||||||||||||| Sbjct: 20135 gtccaagaagaagttgaaaag 20115
>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3 of 3 of the complete sequence Length = 209806 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 tggcaattgtgaagagtgata 228 ||||||||||||||||||||| Sbjct: 168018 tggcaattgtgaagagtgata 167998
>emb|AL512629.7| Human DNA sequence from clone RP11-564N10 on chromosome 13 Contains the 5' end of the FGF14 gene for fibroblast growth factor 14, a lipoyltransferase (LOC51601) pseudogene and a CpG island, complete sequence Length = 188696 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 tggcaattgtgaagagtgata 228 ||||||||||||||||||||| Sbjct: 18913 tggcaattgtgaagagtgata 18893
>emb|AL451083.5| Human DNA sequence from clone RP11-286F20 on chromosome 1 Contains a novel gene (KIAA1383) and a CpG island, complete sequence Length = 98078 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 cttgcctgtcttggataaatt 196 ||||||||||||||||||||| Sbjct: 85787 cttgcctgtcttggataaatt 85807
>emb|AL356476.13| Human DNA sequence from clone RP11-655H13 on chromosome 10 Contains a mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5) pseudogene and a novel gene, complete sequence Length = 184510 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 tggactatgagtcaagcatgt 449 ||||||||||||||||||||| Sbjct: 154882 tggactatgagtcaagcatgt 154862
>emb|X71621.1|SCELM1AA S.cerevisiae genes ELM1 and PRI2 Length = 17564 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 12411 aagaagaagttgaaaagaaga 12391
>gb|AC144481.6| Medicago truncatula clone mth2-35e10, complete sequence Length = 127189 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 441 caagcatgtactgattcatacacaaaaactctgaagaaatggcatggctggct 493 ||||| ||||||||||| || | || ||||| ||||| |||||||||||||| Sbjct: 10298 caagcctgtactgattcctataacaagactctaaagaagtggcatggctggct 10350
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 aagaagttgaaaagaagaccg 330 ||||||||||||||||||||| Sbjct: 596182 aagaagttgaaaagaagaccg 596202
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 caagaagaagttgaaaagaag 326 ||||||||||||||||||||| Sbjct: 71403 caagaagaagttgaaaagaag 71423
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 378 gccatggacttccttgttgaactgttccgtaat 410 |||||||||||||| |||| |||||||| |||| Sbjct: 15168568 gccatggacttcctggttgcactgttccataat 15168600
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 201 gctgctatggcaattgtgaagagtg 225 |||||||||||| |||||||||||| Sbjct: 149957 gctgctatggcacttgtgaagagtg 149933
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 378 gccatggacttccttgttgaactgttccgtaat 410 |||||||||||||| |||| |||||||| |||| Sbjct: 35317 gccatggacttcctggttgcactgttccataat 35349
>dbj|AK105492.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C02, full insert sequence Length = 1753 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 gctgctatggcaattgtgaagagtg 225 |||||||||||| |||||||||||| Sbjct: 1469 gctgctatggcacttgtgaagagtg 1493
>emb|Z28044.1|SCYKL044W S.cerevisiae chromosome XI reading frame ORF YKL044w Length = 1668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 1595 aagaagaagttgaaaagaaga 1575
>emb|Z28043.1|SCYKL043W S.cerevisiae chromosome XI reading frame ORF YKL043w Length = 1832 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 32 aagaagaagttgaaaagaaga 12
>gb|AY949948.1| Saccharomyces cerevisiae strain YPS610 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949947.1| Saccharomyces cerevisiae strain YPS608 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949946.1| Saccharomyces cerevisiae strain YPS606 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949945.1| Saccharomyces cerevisiae strain YPS604 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949944.1| Saccharomyces cerevisiae strain YPS602 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949943.1| Saccharomyces cerevisiae strain YPS600 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949942.1| Saccharomyces cerevisiae strain YPS598 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949941.1| Saccharomyces cerevisiae strain YPS400 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949940.1| Saccharomyces cerevisiae strain YPS396 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949939.1| Saccharomyces cerevisiae strain YPH499 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949938.1| Saccharomyces cerevisiae strain Sgu52F PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949937.1| Saccharomyces cerevisiae strain Sgu52E PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949936.1| Saccharomyces cerevisiae strain ORM1-1 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949935.1| Saccharomyces cerevisiae strain MMW1-15h2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949934.1| Saccharomyces cerevisiae strain MMW1-15 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949933.1| Saccharomyces cerevisiae strain MMW1-12 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949932.1| Saccharomyces cerevisiae strain MMW1-2h2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949931.1| Saccharomyces cerevisiae strain MMW1-2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949930.1| Saccharomyces cerevisiae strain MMR2-5 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949929.1| Saccharomyces cerevisiae strain MM@2-3 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949928.1| Saccharomyces cerevisiae strain MMR2-1 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949927.1| Saccharomyces cerevisiae strain M7-8D PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949926.1| Saccharomyces cerevisiae strain M5-7B PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949925.1| Saccharomyces cerevisiae strain M5-7A PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949924.1| Saccharomyces cerevisiae strain M2-8 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949923.1| Saccharomyces cerevisiae strain M1-2A PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949922.1| Saccharomyces cerevisiae strain Fy93,5a PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949921.1| Saccharomyces cerevisiae strain Bb32(5) PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949920.1| Saccharomyces cerevisiae strain Ba194 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|U05241.1|SCU05241 Saccharomyces cerevisiae strain YPH1 putative transcription factor Phd1p (PHD1) gene, complete cds Length = 2020 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaaga 327 ||||||||||||||||||||| Sbjct: 627 aagaagaagttgaaaagaaga 607
>emb|AL732485.8| Mouse DNA sequence from clone RP23-70G24 on chromosome 2, complete sequence Length = 92562 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 gcaagcaaatcttgcctgtct 186 ||||||||||||||||||||| Sbjct: 83981 gcaagcaaatcttgcctgtct 84001
>ref|NM_119452.3| Arabidopsis thaliana ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1); transcription factor AT4G32980 (ATH1) mRNA, complete cds Length = 2268 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaag 326 |||||||||||||||||||| Sbjct: 345 aagaagaagttgaaaagaag 326
>ref|NM_113399.1| Arabidopsis thaliana DNA binding AT3G24870 mRNA, complete cds Length = 5526 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 gaagaaatggcatggctggc 492 |||||||||||||||||||| Sbjct: 1726 gaagaaatggcatggctggc 1745
>ref|NM_113400.3| Arabidopsis thaliana DNA binding AT3G24880 mRNA, complete cds Length = 6089 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 gaagaaatggcatggctggc 492 |||||||||||||||||||| Sbjct: 1741 gaagaaatggcatggctggc 1760
>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence Length = 156084 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aattgtgaagagtgatattg 231 |||||||||||||||||||| Sbjct: 147038 aattgtgaagagtgatattg 147057
>gb|AC151368.3| Aotus nancymaae clone CH258-251O19, complete sequence Length = 189563 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 tttggaagggatgaaccatgtcag 121 |||||| ||||||||||||||||| Sbjct: 76264 tttggatgggatgaaccatgtcag 76287
>gb|AC113302.13| Mus musculus chromosome 5, clone RP23-431M7, complete sequence Length = 201427 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 ccatccagactggactatgagtca 442 ||||||| |||||||||||||||| Sbjct: 51021 ccatccacactggactatgagtca 51044
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 tttggaagggatgaaccatgtcag 121 |||||| ||||||||||||||||| Sbjct: 1565176 tttggatgggatgaaccatgtcag 1565199
>gb|AE013187.1| Thermoanaerobacter tengcongensis MB4, section 214 of 244 of the complete genome Length = 11851 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 agaagaagttgaaaagaaga 327 |||||||||||||||||||| Sbjct: 10472 agaagaagttgaaaagaaga 10453
>gb|AC131784.4| Mus musculus BAC clone RP24-391G14 from chromosome 7, complete sequence Length = 175150 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 caagaagaagttgaaaagaa 325 |||||||||||||||||||| Sbjct: 65724 caagaagaagttgaaaagaa 65743
>gb|AC124189.3| Mus musculus BAC clone RP23-254C8 from 5, complete sequence Length = 150507 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 ccatccagactggactatgagtca 442 ||||||| |||||||||||||||| Sbjct: 15063 ccatccacactggactatgagtca 15040
>ref|XM_646239.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (170.t00017) partial mRNA Length = 696 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 ctcctaacaaagataaattt 548 |||||||||||||||||||| Sbjct: 397 ctcctaacaaagataaattt 378
>ref|XM_646996.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (133.t00008) partial mRNA Length = 525 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aagaagaagttgaaaagaag 326 |||||||||||||||||||| Sbjct: 44 aagaagaagttgaaaagaag 63
>emb|CR730554.1|CNS0GQN3 Tetraodon nigroviridis full-length cDNA Length = 1318 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 actggactatgagtcaagca 446 |||||||||||||||||||| Sbjct: 614 actggactatgagtcaagca 595
>emb|CR727607.2|CNS0GOD9 Tetraodon nigroviridis full-length cDNA Length = 1331 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 actggactatgagtcaagca 446 |||||||||||||||||||| Sbjct: 624 actggactatgagtcaagca 605
>emb|CR703130.2|CNS0G5HI Tetraodon nigroviridis full-length cDNA Length = 1008 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 actggactatgagtcaagca 446 |||||||||||||||||||| Sbjct: 546 actggactatgagtcaagca 527
>emb|CR687850.2|CNS0FTP2 Tetraodon nigroviridis full-length cDNA Length = 1120 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 actggactatgagtcaagca 446 |||||||||||||||||||| Sbjct: 673 actggactatgagtcaagca 654
>emb|CR684165.2|CNS0FQUP Tetraodon nigroviridis full-length cDNA Length = 953 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 actggactatgagtcaagca 446 |||||||||||||||||||| Sbjct: 244 actggactatgagtcaagca 225
>gb|AC004885.2| Homo sapiens PAC clone RP4-781A18 from 7, complete sequence Length = 190842 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 actcctcagacccagcaaaa 281 |||||||||||||||||||| Sbjct: 44974 actcctcagacccagcaaaa 44993
>emb|CR661825.2|CNS0F9MV Tetraodon nigroviridis full-length cDNA Length = 1041 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 actggactatgagtcaagca 446 |||||||||||||||||||| Sbjct: 333 actggactatgagtcaagca 314
>emb|CR657762.1|CNS0F6I0 Tetraodon nigroviridis full-length cDNA Length = 1311 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 actggactatgagtcaagca 446 |||||||||||||||||||| Sbjct: 600 actggactatgagtcaagca 581
>emb|CR642978.2|CNS0EV3C Tetraodon nigroviridis full-length cDNA Length = 1080 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 actggactatgagtcaagca 446 |||||||||||||||||||| Sbjct: 389 actggactatgagtcaagca 370
>emb|AL022161.1|HS380C13 Human DNA sequence from clone RP3-380C13 on chromosome Xq22.1-22.3 Contains a calmodulin 2 (phosphorylase kinase, delta) (CALM2) pseudogene, complete sequence Length = 139444 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 atattggaggaaatatcacgaggt 249 ||||||||||||||||||| |||| Sbjct: 95288 atattggaggaaatatcacaaggt 95311
>emb|Z83320.1|ATZ83320 A.thaliana partial ATH1 gene Length = 10072 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaag 326 |||||||||||||||||||| Sbjct: 8560 aagaagaagttgaaaagaag 8541
>emb|X80127.1|ATHIGEN A.thaliana AtH1 gene Length = 4878 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaag 326 |||||||||||||||||||| Sbjct: 1654 aagaagaagttgaaaagaag 1635
>gb|AY072174.1| Arabidopsis thaliana putative homeobox gene ATH1 protein (At4g32980) mRNA, complete cds Length = 2277 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaag 326 |||||||||||||||||||| Sbjct: 347 aagaagaagttgaaaagaag 328
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ccgcaaaaggttcatcaagc 347 |||||||||||||||||||| Sbjct: 1483808 ccgcaaaaggttcatcaagc 1483789
>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78 Length = 198669 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aagaagaagttgaaaagaag 326 |||||||||||||||||||| Sbjct: 139456 aagaagaagttgaaaagaag 139475
>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA project) Length = 94482 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aagaagaagttgaaaagaag 326 |||||||||||||||||||| Sbjct: 48760 aagaagaagttgaaaagaag 48779
>gb|AC148057.3| Callicebus moloch clone LB5-121J11, complete sequence Length = 152135 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 tttggaagggatgaaccatgtcag 121 |||||| ||||||||||||||||| Sbjct: 46189 tttggatgggatgaaccatgtcag 46212
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 aggttcatcaagctgcacca 354 |||||||||||||||||||| Sbjct: 3543780 aggttcatcaagctgcacca 3543799
>gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosome 12, complete sequence Length = 131417 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 taacaaagataaatttatgg 552 |||||||||||||||||||| Sbjct: 84879 taacaaagataaatttatgg 84860
>gb|AC146883.3| Callithrix jacchus clone CH259-225J7, complete sequence Length = 216802 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 tttggaagggatgaaccatgtcag 121 |||||| ||||||||||||||||| Sbjct: 36785 tttggatgggatgaaccatgtcag 36808
>emb|BX826894.1|CNS0A4MQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2123 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aagaagaagttgaaaagaag 326 |||||||||||||||||||| Sbjct: 203 aagaagaagttgaaaagaag 184
>dbj|AP006346.1| Marsupenaeus japonicus mitochondrial DNA, complete genome Length = 15968 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gagtgatattggaggaaata 240 |||||||||||||||||||| Sbjct: 1182 gagtgatattggaggaaata 1163
>gb|AC084571.1|CBRG39J22 Caenorhabditis briggsae cosmid G39J22, complete sequence Length = 41637 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 atggtccaagaagaagttga 319 |||||||||||||||||||| Sbjct: 13773 atggtccaagaagaagttga 13754
>gb|AC116849.11| Mus musculus chromosome 19, clone RP24-395F1, complete sequence Length = 168486 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aattgtgaagagtgatattg 231 |||||||||||||||||||| Sbjct: 22516 aattgtgaagagtgatattg 22535
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ctaacaaagataaatttatg 551 |||||||||||||||||||| Sbjct: 94143 ctaacaaagataaatttatg 94124
>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 Length = 78529 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 gaagaaatggcatggctggc 492 |||||||||||||||||||| Sbjct: 65064 gaagaaatggcatggctggc 65045 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 gaagaaatggcatggctggc 492 |||||||||||||||||||| Sbjct: 53805 gaagaaatggcatggctggc 53786
>gb|AC155305.2| Mus musculus BAC clone RP24-182I21 from 12, complete sequence Length = 172724 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 taacaaagataaatttatgg 552 |||||||||||||||||||| Sbjct: 12054 taacaaagataaatttatgg 12035
>gb|AC154420.2| Mus musculus BAC clone RP24-212L9 from 14, complete sequence Length = 159591 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 catacacaaaaactctgaagaaat 480 ||||||||||||| |||||||||| Sbjct: 142652 catacacaaaaacactgaagaaat 142675
>gb|AC147891.2| Xenopus tropicalis clone CH216-2E23, complete sequence Length = 209003 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 tgctcctaacaaagataaat 546 |||||||||||||||||||| Sbjct: 166389 tgctcctaacaaagataaat 166370
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 ataaatttatggaggtaatt 560 |||||||||||||||||||| Sbjct: 2252617 ataaatttatggaggtaatt 2252598
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 tttggaagggatgaaccatgtcag 121 |||||| ||||||||||||||||| Sbjct: 1543915 tttggatgggatgaaccatgtcag 1543938
>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete sequence Length = 210185 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tgatattggaggaaatatca 243 |||||||||||||||||||| Sbjct: 114759 tgatattggaggaaatatca 114778 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,439,476 Number of Sequences: 3902068 Number of extensions: 5439476 Number of successful extensions: 104516 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104050 Number of HSP's gapped (non-prelim): 466 length of query: 642 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 619 effective length of database: 17,143,297,704 effective search space: 10611701278776 effective search space used: 10611701278776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)