ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bags9d09 | 591 | AV914962 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 500 | -- | --- | - | -- | --- | - |
| bags9d08 | 50 | AV833443 | not_full | emb|AL954821.10| Mouse DNA sequence from clone RP23-415G6 on chromosome 11, complete sequence Length = 97532 | 23 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| bags9d07 | 627 | AV914961 | not_full | gb|AY123418.1| Triticum aestivum putative ribosomal protein S18 mRNA, complete cds Length = 868 | 500 | not_full | RS18_ARATH (P34788) 40S ribosomal protein S18 Length = 152 | 120 | -- | --- | - | -- | --- | - |
| bags9d05 | 651 | AV914960 | not_full | dbj|AK121233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093E21, full insert sequence Length = 935 | 500 | full | VATL_AVESA (P23957) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) Length = 165 | 48 | -- | --- | - | -- | --- | - |
| bags9d04 | 268 | AV914959 | not_full | gb|BT009203.1| Triticum aestivum clone wle1n.pk0021.e6:fis, full insert mRNA sequence Length = 836 | 33 | not_full | SYD_HUMAN (P14868) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS) Length = 501 | 380 | -- | --- | - | -- | --- | - |
| bags9d03 | 508 | AV914958 | not_full | dbj|AB115914.1| Triticum aestivum Wrab18 mRNA for ABA inducible protein, complete cds Length = 852 | 101 | not_full | LEA1_HORVU (P14928) ABA-inducible protein PHV A1 Length = 213 | 13 | -- | --- | - | -- | --- | - |
| bags9d02 | 596 | AV914957 | not_full | ref|XM_482823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1296 | 63 | not_full | AHSA1_MOUSE (Q8BK64) Activator of 90 kDa heat shock protein ATPase homolog 1 (AHA1) Length = 338 | 10 | -- | --- | - | -- | --- | - |
| bags9d01 | 596 | AV914956 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 28 | not_full | NBR1_PONPY (Q5RC94) Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1 protein) Length = 894 | 11 | -- | --- | - | -- | --- | - |
| bags9c24 | 476 | AV914955 | not_full | ref|NM_185178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1140 | 53 | not_full | Y4597_ARATH (P0C042) Hypothetical protein At4g15970 Length = 367 | 9 | -- | --- | - | -- | --- | - |
| bags9c23 | 646 | AV914954 | full | ref|XM_483553.1| Oryza sativa (japonica cultivar-group), mRNA Length = 624 | 8 | not_full | MD2L2_HUMAN (Q9UI95) Mitotic spindle assembly checkpoint protein MAD2B (MAD2-like 2) (hREV7) Length = 211 | 12 | -- | --- | - | -- | --- | - |
| bags9c21 | 120 | AV914953 | not_full | emb|X60343.1|HVGADPH H.vulgare GADPH mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase Length = 1365 | 500 | not_full | G3PX_HORVU (P26517) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) Length = 337 | 77 | -- | --- | - | -- | --- | - |
| bags9c19 | 434 | AV914952 | not_full | emb|AM039897.1| Hordeum vulgare mRNA for S-adenosyl-L-homocysteine hydrolase (ahh1 gene) Length = 1472 | 368 | not_full | SAHH_WHEAT (P32112) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 485 | 225 | -- | --- | - | -- | --- | - |
| bags9c18 | 513 | AV914951 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 60 | not_full | SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL receptor) (Scavenger receptor class F member 1) Length = 830 | 1 | -- | --- | - | -- | --- | - |
| bags9c17 | 610 | AV914950 | not_full | ref|XM_478169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1179 | 24 | not_full | FKBP2_ARATH (O22870) Probable FKBP-type peptidyl-prolyl cis-trans isomerase 2, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) Length = 223 | 157 | -- | --- | - | -- | --- | - |
| bags9c16 | 641 | AV914949 | not_full | gb|AF443601.1|AF443601 Oryza sativa clathrin assembly protein AP17-like protein mRNA, complete cds Length = 842 | 67 | not_full | AP2S1_MAIZE (O50016) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) Length = 132 | 47 | -- | --- | - | -- | --- | - |
| bags9c15 | 519 | AV914948 | not_full | gb|AF475123.1| Triticum aestivum acidic ribosomal protein P2a-2 mRNA, partial cds Length = 339 | 277 | not_full | RLA2A_MAIZE (P46252) 60S acidic ribosomal protein P2A (P2) Length = 111 | 52 | -- | --- | - | -- | --- | - |
| bags9c13 | 506 | AV914947 | not_full | ref|XM_466825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 | 500 | not_full | MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) Length = 257 | 92 | -- | --- | - | -- | --- | - |
| bags9c12 | 40 | AV833442 | -- | --- | 0 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| bags9c11 | 552 | AV914946 | not_full | dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds Length = 1053 | 344 | full | RS4_MAIZE (O22424) 40S ribosomal protein S4 Length = 265 | 81 | -- | --- | - | -- | --- | - |
| bags9c10 | 660 | AV914945 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| bags9c09 | 47 | AV833441 | not_full | gb|AF195221.1|AF195221 Pyrus pyrifolia strain Whangkeumbae chlorophyll a/b-binding protein (ChBP) mRNA, complete cds Length = 411 | 13 | not_full | CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor (LHCII type I CAB-13) (LHCP) Length = 266 | 56 | -- | --- | - | -- | --- | - |
| bags9c08 | 606 | AV914944 | not_full | gb|AY062186.1| Oryza sativa chromatin-remodeling factor CHD3 (PKL) mRNA, complete cds Length = 4443 | 50 | not_full | PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-) (Protein GYMNOS) Length = 1384 | 17 | -- | --- | - | -- | --- | - |
| bags9c07 | 32 | AV833440 | not_full | gb|AY826150.1| Aedes albopictus clone AL_337 60S ribosomal protein L11 mRNA, complete cds Length = 552 | 75 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| bags9c05 | 596 | AV914943 | full | ref|NM_187471.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 | 500 | not_full | HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3 Length = 161 | 60 | -- | --- | - | -- | --- | - |
| bags9c03 | 653 | AV914942 | not_full | gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 | 204 | not_full | TCPB_HUMAN (P78371) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta) Length = 534 | 489 | -- | --- | - | -- | --- | - |
| bags9b24 | 280 | AV914941 | not_full | gb|BT009473.1| Triticum aestivum clone wr1.pk0030.b10:fis, full insert mRNA sequence Length = 2604 | 93 | not_full | 2AAA_PEA (P36875) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) Length = 395 | 52 | -- | --- | - | -- | --- | - |
| bags9b23 | 677 | AV914940 | not_full | dbj|AK071836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117P17, full insert sequence Length = 1475 | 51 | not_full | GLPQ_ECOLI (P09394) Glycerophosphoryl diester phosphodiesterase precursor (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase) Length = 358 | 31 | -- | --- | - | -- | --- | - |
| bags9b20 | 612 | AV914939 | not_full | dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D10, full insert sequence Length = 893 | 106 | full | UBE2N_RAT (Q9EQX9) Ubiquitin-conjugating enzyme E2 N (EC 6.3.2.19) (Ubiquitin-protein ligase N) (Ubiquitin carrier protein N) (Bendless-like ubiquitin-conjugating enzyme) Length = 152 | 223 | -- | --- | - | -- | --- | - |
| bags9b18 | 563 | AV914938 | not_full | ref|NM_197199.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0078O01.6), mRNA Length = 1073 | 67 | not_full | RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger protein 8) Length = 485 | 365 | -- | --- | - | -- | --- | - |
| bags9b14 | 629 | AV833439 | not_full | ref|XM_475978.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2343 | 87 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| bags9b12 | 617 | AV914937 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 440 | -- | --- | - | -- | --- | - |
| bags9b11 | 548 | AV914936 | not_full | dbj|AK073142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024D10, full insert sequence Length = 2461 | 35 | not_full | DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3) (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 979 | 12 | -- | --- | - | -- | --- | - |
| bags9b09 | 557 | AV914935 | not_full | dbj|AK120035.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-C08, full insert sequence Length = 1004 | 500 | not_full | ARF_ORYSA (P51823) ADP-ribosylation factor Length = 180 | 500 | -- | --- | - | -- | --- | - |
| bags9b08 | 557 | AV914934 | not_full | dbj|AK119535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B03, full insert sequence Length = 1667 | 80 | not_full | HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast precursor Length = 706 | 500 | -- | --- | - | -- | --- | - |
| bags9b06 | 654 | AV914933 | not_full | gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 | 303 | not_full | CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 | 17 | -- | --- | - | -- | --- | - |
| bags9b04 | 39 | AV833438 | not_full | ref|XM_614123.2| PREDICTED: Bos taurus similar to Lipid phosphate phosphohydrolase 3 (Phosphatidic acid phosphatase 2b) (Phosphatidate phosphohydrolase type 2b) (PAP2b) (PAP-2b) (PAP2-beta) (Differentially expressed in rat intestine 42) (Dri42) (LOC534372 | 4 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| bags9b03 | 638 | AV914932 | not_full | gb|BT009251.1| Triticum aestivum clone wlk4.pk0006.e8:fis, full insert mRNA sequence Length = 1553 | 199 | not_full | IMA1A_ORYSA (Q71VM4) Importin alpha-1a subunit Length = 526 | 47 | -- | --- | - | -- | --- | - |
| bags9b02 | 520 | AV914931 | not_full | ref|XM_483828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4423 | 50 | not_full | ADAM8_MOUSE (Q05910) ADAM 8 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase domain 8) (Cell surface antigen MS2) (Macrophage cysteine-rich glycoprotein) (CD156 antigen) Length = 826 | 5 | -- | --- | - | -- | --- | - |
| bags9b01 | 615 | AV914930 | not_full | dbj|AK121443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O18, full insert sequence Length = 841 | 150 | not_full | RL24_RICPR (Q9ZCR6) 50S ribosomal protein L24 Length = 113 | 186 | -- | --- | - | -- | --- | - |
| bags9a24 | 639 | AV833437 | not_full | dbj|AK103121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119K06, full insert sequence Length = 1217 | 42 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| bags9a23 | 583 | AV914929 | not_full | gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, complete cds Length = 1199 | 78 | not_full | TNIK_HUMAN (Q9UKE5) TRAF2 and NCK-interacting kinase (EC 2.7.11.1) Length = 1360 | 12 | -- | --- | - | -- | --- | - |
| bags9a22 | 632 | AV914928 | not_full | dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 | 71 | not_full | RT23_SCHPO (Q9UR07) Retrotransposable element Tf2 155 kDa protein type 3 Length = 1333 | 26 | -- | --- | - | -- | --- | - |
| bags9a21 | 631 | AV914927 | not_full | dbj|AK060267.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-D04, full insert sequence Length = 742 | 500 | full | CYC_WHEAT (P00068) Cytochrome c Length = 112 | 174 | -- | --- | - | -- | --- | - |
| bags9a20 | 539 | AV914926 | not_full | ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 | 97 | not_full | RL5A_ORYSA (P49625) 60S ribosomal protein L5-1 Length = 304 | 25 | -- | --- | - | -- | --- | - |
| bags9a19 | 538 | AV914925 | not_full | ref|NM_184007.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2184 | 39 | not_full | MFPA_BRANA (O49809) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase | 86 | -- | --- | - | -- | --- | - |
| bags9a18 | 650 | AV914924 | not_full | dbj|AK121949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J07, full insert sequence Length = 2462 | 500 | not_full | HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast precursor Length = 706 | 500 | -- | --- | - | -- | --- | - |
| bags9a17 | 653 | AV914923 | not_full | gb|AC023698.4| Drosophila melanogaster X BAC RP98-17C9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160023 | 37 | not_full | SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 | 500 | -- | --- | - | -- | --- | - |
| bags9a15 | 562 | AV914922 | not_full | ref|XM_476650.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3250 | 30 | not_full | U888_DEIRA (Q9RVY3) Protein DR0888 Length = 253 | 27 | -- | --- | - | -- | --- | - |
| bags9a14 | 619 | AV914921 | not_full | dbj|AK069830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M09, full insert sequence Length = 778 | 58 | not_full | SYFB_ANADE (Q2IJB3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 800 | 19 | -- | --- | - | -- | --- | - |
| bags9a13 | 479 | AV914920 | not_full | ref|XM_469569.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1540 | 500 | not_full | ACT1_ORYSA (P13362) Actin-1 Length = 377 | 394 | -- | --- | - | -- | --- | - |
