ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
2ref|NM_189339.1| Oryza sativa (japonica cultivar-group), predic... 66 2e-07
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
4dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
5gb|AC134840.3| Mus musculus BAC clone RP24-365I5 from chromosome... 42 2.2
6gb|AC091873.2| Homo sapiens chromosome 5 clone CTD-2577N22, comp... 42 2.2
7dbj|AK081490.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 2.2
8gb|AC138940.3| Homo sapiens chromosome 5 clone RP11-704G19, comp... 42 2.2
9gb|AC140171.3| Homo sapiens chromosome 5 clone RP11-804N13, comp... 42 2.2
10gb|AC091869.4| Homo sapiens chromosome 5 clone CTD-2381F15, comp... 42 2.2
11gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.2
12gb|AC007327.1|AC007327 Homo sapiens clone RP11-155G7 from 7p14-1... 42 2.2
13gb|AC107678.14| Mus musculus chromosome 1, clone RP23-252K18, co... 40 8.7
14gb|AC166170.4| Mus musculus BAC clone RP23-174N23 from chromosom... 40 8.7
15gb|AC150860.4| Bos taurus BAC CH240-424I20 (Children's Hospital... 40 8.7
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.7
17gb|AC146618.2| Mus musculus BAC clone RP23-5P3 from chromosome 1... 40 8.7
18gb|AC122801.3| Mus musculus BAC clone RP23-471L3 from chromosome... 40 8.7
19ref|XM_746107.1| Aspergillus fumigatus Af293 hypothetical protei... 40 8.7
20emb|CR388419.13| Zebrafish DNA sequence from clone DKEY-40C17 in... 40 8.7
21gb|AC132100.3| Mus musculus BAC clone RP24-294D10 from chromosom... 40 8.7
22gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c... 40 8.7
23gb|AC134730.2| Homo sapiens 3 BAC RP11-254E21 (Roswell Park Canc... 40 8.7
24emb|BX883044.1| Rattus norvegicus chromosome 20, major histocomp... 40 8.7
25gb|AC159646.2| Mus musculus BAC clone RP23-192K23 from chromosom... 40 8.7
26gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.7
27gb|AC087189.3| Homo sapiens chromosome 16 clone RP11-43L5, compl... 40 8.7
28gb|AC151832.3| Mus musculus BAC clone RP24-68M1 from chromosome ... 40 8.7
29dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
31emb|BX005443.17| Zebrafish DNA sequence from clone CH211-167L23 ... 40 8.7
32dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.7
33dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
34emb|BX005122.10| Zebrafish DNA sequence from clone CH211-134D11,... 40 8.7
35emb|AL845284.4| Zebrafish DNA sequence from clone DKEY-277C13, c... 40 8.7
36gb|AC133079.4| Mus musculus BAC clone RP24-468O18 from 12, compl... 40 8.7
37dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.7
38gb|AC120423.13| Mus musculus chromosome 6, clone RP24-495D13, co... 40 8.7
39gb|AC005884.1|AC005884 Homo sapiens chromosome 17, clone hRPK.2... 40 8.7
40gb|AC133194.3| Mus musculus BAC clone RP23-403H14 from 3, comple... 40 8.7
41dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ... 40 8.7
42dbj|AP001137.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 8.7 
>dbj|AK103121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119K06, full
           insert sequence
          Length = 1217

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                       
Query: 32  aatctaggtattgttggattctacaaggactttgtcgaagccctctacgaagacctcggt 91
           |||| |||||| |||| |||||||||||||||||| ||||  ||||| ||  ||||||||
Sbjct: 320 aatccaggtatcgttgcattctacaaggactttgttgaagagctctatgagaacctcggt 379

                                                  
Query: 92  gggcaggcatctgttacggcgatagggcatatttcacat 130
           ||||| |||||| |||| ||||| |||||||||||||||
Sbjct: 380 gggcaagcatctattacagcgattgggcatatttcacat 418
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>ref|NM_189339.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 960

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 32  aatctaggtattgttggattctacaaggactttgtcgaagccctctacgaagacctcggt 91
           |||| |||||| |||| |||||||||||||||||| ||||  ||||| ||  ||||||||
Sbjct: 397 aatccaggtatcgttgcattctacaaggactttgttgaagagctctatgagaacctcggt 456

                            
Query: 92  gggcaggcatctgttac 108
           ||||| |||||| ||||
Sbjct: 457 gggcaagcatctattac 473
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                            
Query: 37       aggtattgttggattctacaaggactttgtcgaagccctctacgaagacctcggtgggca 96
                |||||| |||| |||||||||||||||||| ||||  ||||| ||  |||||||||||||
Sbjct: 42260082 aggtatcgttgcattctacaaggactttgttgaagagctctatgagaacctcggtgggca 42260023

                            
Query: 97       ggcatctgttac 108
                 |||||| ||||
Sbjct: 42260022 agcatctattac 42260011
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0401G10
          Length = 160704

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 37    aggtattgttggattctacaaggactttgtcgaagccctctacgaagacctcggtgggca 96
             |||||| |||| |||||||||||||||||| ||||  ||||| ||  |||||||||||||
Sbjct: 32039 aggtatcgttgcattctacaaggactttgttgaagagctctatgagaacctcggtgggca 31980

                         
Query: 97    ggcatctgttac 108
              |||||| ||||
Sbjct: 31979 agcatctattac 31968
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>gb|AC134840.3| Mus musculus BAC clone RP24-365I5 from chromosome 5, complete sequence
          Length = 154980

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 471   tgtgctaaataacacatgata 491
             |||||||||||||||||||||
Sbjct: 13673 tgtgctaaataacacatgata 13653
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>gb|AC091873.2| Homo sapiens chromosome 5 clone CTD-2577N22, complete sequence
          Length = 166885

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   gaaaatagaaagcactatata 312
             |||||||||||||||||||||
Sbjct: 84665 gaaaatagaaagcactatata 84685
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>dbj|AK081490.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130021A05 product:unclassifiable, full
           insert sequence
          Length = 1724

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 523 atctagaaatgcaaactatgt 543
           |||||||||||||||||||||
Sbjct: 657 atctagaaatgcaaactatgt 637
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>gb|AC138940.3| Homo sapiens chromosome 5 clone RP11-704G19, complete sequence
          Length = 182305

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 292    gaaaatagaaagcactatata 312
              |||||||||||||||||||||
Sbjct: 159263 gaaaatagaaagcactatata 159283
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>gb|AC140171.3| Homo sapiens chromosome 5 clone RP11-804N13, complete sequence
          Length = 158091

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   gaaaatagaaagcactatata 312
             |||||||||||||||||||||
Sbjct: 44385 gaaaatagaaagcactatata 44405
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>gb|AC091869.4| Homo sapiens chromosome 5 clone CTD-2381F15, complete sequence
          Length = 156441

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    gaaaatagaaagcactatata 312
              |||||||||||||||||||||
Sbjct: 137935 gaaaatagaaagcactatata 137915
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>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete
              sequence
          Length = 228371

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 523    atctagaaatgcaaactatgt 543
              |||||||||||||||||||||
Sbjct: 218311 atctagaaatgcaaactatgt 218331
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>gb|AC007327.1|AC007327 Homo sapiens clone RP11-155G7 from 7p14-15, complete sequence
          Length = 169347

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 424   tatgtgaattttcaattttgc 444
             |||||||||||||||||||||
Sbjct: 60174 tatgtgaattttcaattttgc 60154
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>gb|AC107678.14| Mus musculus chromosome 1, clone RP23-252K18, complete sequence
          Length = 169766

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 604    tctctcttctgtctctcttatgct 627
              ||||||| ||||||||||||||||
Sbjct: 128145 tctctctcctgtctctcttatgct 128122
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>gb|AC166170.4| Mus musculus BAC clone RP23-174N23 from chromosome 6, complete sequence
          Length = 216743

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 604    tctctcttctgtctctcttatgct 627
              ||||||||||||||||| ||||||
Sbjct: 105254 tctctcttctgtctctcatatgct 105231
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>gb|AC150860.4| Bos taurus  BAC CH240-424I20 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 165874

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   atacaatggaaagccacata 522
             ||||||||||||||||||||
Sbjct: 65495 atacaatggaaagccacata 65476
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 610      ttctgtctctcttatgcttc 629
                ||||||||||||||||||||
Sbjct: 12147041 ttctgtctctcttatgcttc 12147060
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>gb|AC146618.2| Mus musculus BAC clone RP23-5P3 from chromosome 10, complete sequence
          Length = 197233

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catgtgttccaaatggcagg 195
             ||||||||||||||||||||
Sbjct: 57690 catgtgttccaaatggcagg 57709
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>gb|AC122801.3| Mus musculus BAC clone RP23-471L3 from chromosome 18, complete sequence
          Length = 187926

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 556   ttctgtttgtcttgaattatgtgg 579
             ||||||||||||||| ||||||||
Sbjct: 27748 ttctgtttgtcttgagttatgtgg 27771
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>ref|XM_746107.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g13230)
           partial mRNA
          Length = 879

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 caattttgccatattctgggagat 459
           |||| |||||||||||||||||||
Sbjct: 493 caatcttgccatattctgggagat 470
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>emb|CR388419.13| Zebrafish DNA sequence from clone DKEY-40C17 in linkage group 2,
             complete sequence
          Length = 128710

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 603   gtctctcttctgtctctctt 622
             ||||||||||||||||||||
Sbjct: 48318 gtctctcttctgtctctctt 48337
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>gb|AC132100.3| Mus musculus BAC clone RP24-294D10 from chromosome 18, complete sequence
          Length = 173949

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 556    ttctgtttgtcttgaattatgtgg 579
              ||||||||||||||| ||||||||
Sbjct: 157743 ttctgtttgtcttgagttatgtgg 157766
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>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 602    ggtctctcttctgtctctct 621
              ||||||||||||||||||||
Sbjct: 126893 ggtctctcttctgtctctct 126874
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>gb|AC134730.2| Homo sapiens 3 BAC RP11-254E21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 45687

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   atggcaggcaaaaagttaac 207
             ||||||||||||||||||||
Sbjct: 18727 atggcaggcaaaaagttaac 18746
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>emb|BX883044.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 3/11
          Length = 340493

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 24     tccctggcaatctaggtattgttggatt 51
              |||||||||||||||||| ||| |||||
Sbjct: 234591 tccctggcaatctaggtaatgtgggatt 234564
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>gb|AC159646.2| Mus musculus BAC clone RP23-192K23 from chromosome 12, complete
             sequence
          Length = 194901

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 234   gaaataagagcgtatttcttttag 257
             ||||||||||||||||| ||||||
Sbjct: 37353 gaaataagagcgtattttttttag 37376
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>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0076E06, from chromosome 3, complete sequence
          Length = 126323

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 610   ttctgtctctcttatgcttc 629
             ||||||||||||||||||||
Sbjct: 39650 ttctgtctctcttatgcttc 39669
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>gb|AC087189.3| Homo sapiens chromosome 16 clone RP11-43L5, complete sequence
          Length = 184877

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 603   gtctctcttctgtctctctt 622
             ||||||||||||||||||||
Sbjct: 52066 gtctctcttctgtctctctt 52085
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>gb|AC151832.3| Mus musculus BAC clone RP24-68M1 from chromosome 10, complete sequence
          Length = 222815

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catgtgttccaaatggcagg 195
              ||||||||||||||||||||
Sbjct: 152588 catgtgttccaaatggcagg 152607
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 610      ttctgtctctcttatgcttc 629
                ||||||||||||||||||||
Sbjct: 10965879 ttctgtctctcttatgcttc 10965860
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 610      ttctgtctctcttatgcttc 629
                ||||||||||||||||||||
Sbjct: 12143804 ttctgtctctcttatgcttc 12143823
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>emb|BX005443.17| Zebrafish DNA sequence from clone CH211-167L23 in linkage group 17,
            complete sequence
          Length = 132502

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 476  taaataacacatgataaataaaac 499
            |||||||||||||| |||||||||
Sbjct: 4685 taaataacacatgagaaataaaac 4662
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      acgaagacctcggtgggcag 97
               ||||||||||||||||||||
Sbjct: 8721083 acgaagacctcggtgggcag 8721102
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>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0698G06
          Length = 138282

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 610    ttctgtctctcttatgcttc 629
              ||||||||||||||||||||
Sbjct: 105584 ttctgtctctcttatgcttc 105565
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>emb|BX005122.10| Zebrafish DNA sequence from clone CH211-134D11, complete sequence
          Length = 184142

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 476    taaataacacatgataaataaaac 499
              |||||||||||||| |||||||||
Sbjct: 118910 taaataacacatgagaaataaaac 118933
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>emb|AL845284.4| Zebrafish DNA sequence from clone DKEY-277C13, complete sequence
          Length = 226168

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 484    acatgataaataaaacgtta 503
              ||||||||||||||||||||
Sbjct: 198156 acatgataaataaaacgtta 198137
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>gb|AC133079.4| Mus musculus BAC clone RP24-468O18 from 12, complete sequence
          Length = 176177

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 234   gaaataagagcgtatttcttttag 257
             ||||||||||||||||| ||||||
Sbjct: 88281 gaaataagagcgtattttttttag 88258
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>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    tctgtctctcttatgcttcc 630
              ||||||||||||||||||||
Sbjct: 303486 tctgtctctcttatgcttcc 303505
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>gb|AC120423.13| Mus musculus chromosome 6, clone RP24-495D13, complete sequence
          Length = 158246

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 604 tctctcttctgtctctcttatgct 627
           ||||||||||||||||| ||||||
Sbjct: 508 tctctcttctgtctctcatatgct 485
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>gb|AC005884.1|AC005884 Homo sapiens chromosome 17, clone  hRPK.264_B_14, complete sequence
          Length = 120187

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 426   tgtgaattttcaattttgccatattctg 453
             |||||||||||| |||||| ||||||||
Sbjct: 83084 tgtgaattttcatttttgctatattctg 83057
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>gb|AC133194.3| Mus musculus BAC clone RP23-403H14 from 3, complete sequence
          Length = 205323

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 604   tctctcttctgtctctcttatgct 627
             |||||||||||||||| |||||||
Sbjct: 19018 tctctcttctgtctcttttatgct 19041
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>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   acatatttcttcaggttgat 166
             ||||||||||||||||||||
Sbjct: 30881 acatatttcttcaggttgat 30862
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>dbj|AP001137.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, LL56-APP region,
              clone:B812P3
          Length = 203959

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    tctgtctctcttatgcttcc 630
              ||||||||||||||||||||
Sbjct: 167839 tctgtctctcttatgcttcc 167858


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,308,850
Number of Sequences: 3902068
Number of extensions: 6308850
Number of successful extensions: 116074
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115816
Number of HSP's gapped (non-prelim): 258
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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