ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009203.1| Triticum aestivum clone wle1n.pk0021.e6:fis, full... 159 5e-36
2ref|XM_467194.1| Oryza sativa (japonica cultivar-group), mRNA 92 1e-15
3ref|XM_507519.1| PREDICTED Oryza sativa (japonica cultivar-group... 92 1e-15
4ref|XM_506897.2| PREDICTED Oryza sativa (japonica cultivar-group... 92 1e-15
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
6dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
7dbj|AK119608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
8dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
9dbj|AK098984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
10dbj|AK068513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
11gb|AY105608.1| Zea mays PCO070562 mRNA sequence 86 7e-14
12gb|BT019019.1| Zea mays clone Contig518.F mRNA sequence 70 4e-09
13gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, com... 44 0.22
14gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosom... 44 0.22
15ref|XM_950094.1| Theileria annulata strain Ankara aspartyl-tRNA ... 44 0.22
16gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, r... 44 0.22
17gb|AE003617.3| Drosophila melanogaster chromosome 2L, section 26... 44 0.22
18ref|XM_764297.1| Giardia lamblia ATCC 50803 aspartate-tRNA ligas... 42 0.88
19ref|NM_118821.4| Arabidopsis thaliana ATP binding / aspartate-tR... 40 3.5
20ref|XM_461441.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 3.5
21gb|BT000939.1| Arabidopsis thaliana clone C105093 putative aspar... 40 3.5
22gb|AY063809.1| Arabidopsis thaliana At4g26870 mRNA sequence 40 3.5
23emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 3.5
24emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, ... 40 3.5
25emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, B... 40 3.5
26gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell ... 40 3.5
27gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswel... 40 3.5
28ref|NM_168605.1| Drosophila melanogaster Glycyl-tRNA synthetase ... 40 3.5
29ref|NM_140489.2| Drosophila melanogaster Glycyl-tRNA synthetase ... 40 3.5
30gb|AY051413.1| Drosophila melanogaster GH09263 full length cDNA 40 3.5
31emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chr... 40 3.5
32gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53... 40 3.5
33dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 3.5 
>gb|BT009203.1| Triticum aestivum clone wle1n.pk0021.e6:fis, full insert mRNA
           sequence
          Length = 836

 Score =  159 bits (80), Expect = 5e-36
 Identities = 141/160 (88%), Gaps = 1/160 (0%)
 Strand = Plus / Plus

                                                                       
Query: 106 ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
           |||||||||||||||||||||||||||  ||||||||||  |||||||||||  ||||||
Sbjct: 53  ccaaagttgattggtggatcaagtgaacttggtgcatctccattcaagctggc-gtacaa 111

                                                                       
Query: 166 tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
           |  ||| ||||||| |||||| || ||||  |||| ||||||||| ||||||||||||||
Sbjct: 112 ttaccaacctgcttatttagcgcagtctctacaatcatacaagcaaatgagcatctgtgg 171

                                                   
Query: 226 tggctttggccgcgtgtttgaggttggtcctgtatttaga 265
           ||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 172 tggctttgggcgcgtgtttgaggctggtccggtatttaga 211
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>ref|XM_467194.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2141

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                        
Query: 106  ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
            |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 971  ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 1029

                                                                        
Query: 166  tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 1030 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 1089

                                                      
Query: 226  tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
            ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 1090 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 1131
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>ref|XM_507519.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1717_A09.34 mRNA
          Length = 2163

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                        
Query: 106  ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
            |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 971  ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 1029

                                                                        
Query: 166  tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 1030 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 1089

                                                      
Query: 226  tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
            ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 1090 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 1131
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>ref|XM_506897.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1717_A09.34 mRNA
          Length = 2199

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                        
Query: 106  ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
            |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 1029 ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 1087

                                                                        
Query: 166  tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 1088 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 1147

                                                      
Query: 226  tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
            ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 1148 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 1189
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 106      ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
                |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 28134125 ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 28134183

                                                                            
Query: 166      tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
                ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 28134184 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 28134243

                                                          
Query: 226      tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
                ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 28134244 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 28134285
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>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                          
Query: 106    ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
              |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 123772 ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 123830

                                                                          
Query: 166    tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
              ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 123831 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 123890

                                                        
Query: 226    tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
              ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 123891 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 123932
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>dbj|AK119608.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F07, full
            insert sequence
          Length = 2199

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                        
Query: 106  ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
            |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 1029 ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 1087

                                                                        
Query: 166  tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 1088 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 1147

                                                      
Query: 226  tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
            ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 1148 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 1189
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>dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100E07, full
            insert sequence
          Length = 2600

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                        
Query: 106  ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
            |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 1390 ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 1448

                                                                        
Query: 166  tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 1449 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 1508

                                                      
Query: 226  tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
            ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 1509 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 1550
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>dbj|AK098984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093E04, full
            insert sequence
          Length = 2140

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                        
Query: 106  ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
            |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 970  ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 1028

                                                                        
Query: 166  tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 1029 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 1088

                                                      
Query: 226  tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
            ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 1089 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 1130
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>dbj|AK068513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154D06, full
            insert sequence
          Length = 2160

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 134/162 (82%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                        
Query: 106  ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
            |||||| | |||| |||||| || |||||||||||| |||||||||||||   |||||||
Sbjct: 967  ccaaagctaattgctggatccagcgaaggtggtgcagctgtattcaagctac-agtacaa 1025

                                                                        
Query: 166  tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            ||| ||||| || ||||||||||| ||||| || || || |||||||||   || |||||
Sbjct: 1026 tggacagccagcatgtttagcacagtctcctcagttgtataagcagatggctatttgtgg 1085

                                                      
Query: 226  tggctttggccgcgtgtttgaggttggtcctgtatttagagc 267
            ||| ||||  || || ||||||||||| ||||| ||||||||
Sbjct: 1086 tgggtttgaacgtgtatttgaggttggacctgtttttagagc 1127
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>gb|AY105608.1| Zea mays PCO070562 mRNA sequence
          Length = 1988

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 134/163 (82%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                        
Query: 106  ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
            ||||| ||||||  |||||| |||||||| |||||  |||||||||||||  | ||||||
Sbjct: 846  ccaaaattgatttctggatctagtgaagggggtgcggctgtattcaagcttct-gtacaa 904

                                                                        
Query: 166  tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            ||| || ||||||||||| |||||||| || || ||||||||||| |||   |||| |||
Sbjct: 905  tggtcaacctgcttgtttggcacaatcccctcagttatacaagcaaatggctatctctgg 964

                                                       
Query: 226  tggctttggccgcgtgtttgaggttggtcctgtatttagagca 268
            ||| ||||  || || |||||||| || ||||| |||||||||
Sbjct: 965  tggttttgagcgagtatttgaggtcggccctgtgtttagagca 1007
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>gb|BT019019.1| Zea mays clone Contig518.F mRNA sequence
          Length = 1464

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 132/163 (80%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                       
Query: 106 ccaaagttgattggtggatcaagtgaaggtggtgcatctgtattcaagctggtagtacaa 165
           ||||| ||||||  |||||| || ||||| |||||| |||||||||||||  | ||||||
Sbjct: 415 ccaaaattgatttctggatctagcgaagggggtgcagctgtattcaagcttct-gtacaa 473

                                                                       
Query: 166 tggccagcctgcttgtttagcacaatctccccaattatacaagcagatgagcatctgtgg 225
            || || ||||||||||| |||||||| || || || |||||||| |||   |||| |||
Sbjct: 474 cggtcaacctgcttgtttggcacaatcccctcagttgtacaagcaaatggctatctctgg 533

                                                      
Query: 226 tggctttggccgcgtgtttgaggttggtcctgtatttagagca 268
           ||| ||||  || || |||||||| || ||||| |||||||||
Sbjct: 534 tggttttgagcgagtatttgaggtcggccctgtgtttagagca 576
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>gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, complete sequence
          Length = 177661

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 152   agctggtagtacaatggccagc 173
             ||||||||||||||||||||||
Sbjct: 62131 agctggtagtacaatggccagc 62110
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>gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosome 9, complete sequence
          Length = 204098

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 152    agctggtagtacaatggccagc 173
              ||||||||||||||||||||||
Sbjct: 197074 agctggtagtacaatggccagc 197053
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>ref|XM_950094.1| Theileria annulata strain Ankara aspartyl-tRNA synthetase (TA04845)
           partial mRNA
          Length = 1890

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 175 tgcttgtttagcacaatctccccaattata 204
           |||||||||||||||||| || ||||||||
Sbjct: 720 tgcttgtttagcacaatcaccacaattata 749
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>gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, region 27F-27F, BAC clone
             BACR01E19, complete sequence
          Length = 161009

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 59    aggagtaatttttgttctcggtgcaacttt 88
             |||| |||||||||||||| ||||||||||
Sbjct: 85011 aggattaatttttgttctctgtgcaacttt 84982
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>gb|AE003617.3| Drosophila melanogaster chromosome 2L, section 26 of 83 of the complete
             sequence
          Length = 257317

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 59    aggagtaatttttgttctcggtgcaacttt 88
             |||| |||||||||||||| ||||||||||
Sbjct: 41373 aggattaatttttgttctctgtgcaacttt 41344
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>ref|XM_764297.1| Giardia lamblia ATCC 50803 aspartate-tRNA ligase
           (GLP_457_16800_18467) partial mRNA
          Length = 1668

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 203 tacaagcagatgagcatctgtggtggctttggccgcgtgtttgaggttggtcctgtattt 262
           |||||||||||| ||||||   |||| ||||| || |||| ||| ||||| ||||| |||
Sbjct: 910 tacaagcagatgtgcatctcgagtggttttggtcgtgtgtatgaagttgggcctgtcttt 969

                
Query: 263 agagc 267
           |||||
Sbjct: 970 agagc 974
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>ref|NM_118821.4| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ nucleic
           acid binding / tRNA ligase AT4G26870 mRNA, complete cds
          Length = 1851

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 236 cgcgtgtttgaggttggtcctgtatttagagc 267
           ||||| ||||||||||||||||| || |||||
Sbjct: 912 cgcgtctttgaggttggtcctgttttcagagc 943
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>ref|XM_461441.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F26840g)
           partial mRNA
          Length = 2997

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  aatgccatgttgagaaacaa 53
           ||||||||||||||||||||
Sbjct: 325 aatgccatgttgagaaacaa 344
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>gb|BT000939.1| Arabidopsis thaliana clone C105093 putative aspartate-tRNA ligase
           (At4g26870) mRNA, complete cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 236 cgcgtgtttgaggttggtcctgtatttagagc 267
           ||||| ||||||||||||||||| || |||||
Sbjct: 883 cgcgtctttgaggttggtcctgttttcagagc 914
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>gb|AY063809.1| Arabidopsis thaliana At4g26870 mRNA sequence
          Length = 1829

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 236 cgcgtgtttgaggttggtcctgtatttagagc 267
           ||||| ||||||||||||||||| || |||||
Sbjct: 908 cgcgtctttgaggttggtcctgttttcagagc 939
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
               hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 34      aatgccatgttgagaaacaa 53
               ||||||||||||||||||||
Sbjct: 2124304 aatgccatgttgagaaacaa 2124285
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>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66
          Length = 198372

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 236   cgcgtgtttgaggttggtcctgtatttagagc 267
             ||||| ||||||||||||||||| || |||||
Sbjct: 10368 cgcgtctttgaggttggtcctgttttcagagc 10399
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>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project)
          Length = 128574

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 236   cgcgtgtttgaggttggtcctgtatttagagc 267
             ||||| ||||||||||||||||| || |||||
Sbjct: 54525 cgcgtctttgaggttggtcctgttttcagagc 54556
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>gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 194979

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    agcctgcttgtttagcacaatctc 194
              ||||||||||||| ||||||||||
Sbjct: 114713 agcctgcttgtttggcacaatctc 114690
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>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172540

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 171    agcctgcttgtttagcacaatctc 194
              ||||||||||||| ||||||||||
Sbjct: 141832 agcctgcttgtttggcacaatctc 141855
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>ref|NM_168605.1| Drosophila melanogaster Glycyl-tRNA synthetase CG6778-RB, transcript
            variant B (Aats-gly), mRNA
          Length = 2509

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 171  agcctgcttgtttagcacaatctc 194
            ||||||||||||| ||||||||||
Sbjct: 1685 agcctgcttgtttggcacaatctc 1662
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>ref|NM_140489.2| Drosophila melanogaster Glycyl-tRNA synthetase CG6778-RA, transcript
            variant A (Aats-gly), mRNA
          Length = 2447

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 171  agcctgcttgtttagcacaatctc 194
            ||||||||||||| ||||||||||
Sbjct: 1623 agcctgcttgtttggcacaatctc 1600
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>gb|AY051413.1| Drosophila melanogaster GH09263 full length cDNA
          Length = 2462

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 171  agcctgcttgtttagcacaatctc 194
            ||||||||||||| ||||||||||
Sbjct: 1623 agcctgcttgtttggcacaatctc 1600
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>emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chromosome 2, complete
             sequence
          Length = 166963

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   cctgcttgtttagcacaatc 192
             ||||||||||||||||||||
Sbjct: 75406 cctgcttgtttagcacaatc 75425
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>gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53 of 83 of the complete
              sequence
          Length = 295875

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    agcctgcttgtttagcacaatctc 194
              ||||||||||||| ||||||||||
Sbjct: 175266 agcctgcttgtttggcacaatctc 175243
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>dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT16I07, TM0040,
             complete sequence
          Length = 92281

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 106   ccaaagttgattggtggatcaagtgaaggtgg 137
             ||||||||||||| |||||| ||||| |||||
Sbjct: 32426 ccaaagttgattgctggatctagtgagggtgg 32457


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,194,381
Number of Sequences: 3902068
Number of extensions: 2194381
Number of successful extensions: 43756
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43686
Number of HSP's gapped (non-prelim): 58
length of query: 268
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 246
effective length of database: 17,147,199,772
effective search space: 4218211143912
effective search space used: 4218211143912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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