ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9b18 |
|---|---|
| Clone Library Name | barley_pub |
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 52.4 bits (124), Expect = 9e-07 Identities = 31/103 (30%), Positives = 51/103 (49%) Frame = +3 Query: 243 ERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREE 422 E S K+F A+I +L+ + K++K E+ + + E+ + ++DV E E Sbjct: 353 ELNRSKKDFEAIIQAKNKELE------QTKEEK----EKMQAQKEEVLSHMNDV-LENEL 401 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 +C IC E + V NC H+ C C +W R CP CR ++ Sbjct: 402 QCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDI 444
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 52.0 bits (123), Expect = 1e-06 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EEEC ICM+ + ++LP C H+ C +C W+ +S++CP CR Sbjct: 144 EEECCICMDGKADLILP-CAHSFCQKCIDKWSGQSRNCPVCR 184
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 52.0 bits (123), Expect = 1e-06 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EEEC ICM+ + ++LP C H+ C +C W+ R ++CP CR Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR 192
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 52.0 bits (123), Expect = 1e-06 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EEEC ICM+ + ++LP C H+ C +C W+ R ++CP CR Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR 192
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 52.0 bits (123), Expect = 1e-06 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EEEC ICM+ + ++LP C H+ C +C W+ R ++CP CR Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR 192
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 52.0 bits (123), Expect = 1e-06 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EEEC ICM+ + ++LP C H+ C +C W+ R ++CP CR Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR 192
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 51.6 bits (122), Expect = 2e-06 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 13/97 (13%) Frame = +3 Query: 291 LLQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAER-------------EEECG 431 +L L + + +D +A + E+ A SL+ V + + E+EC Sbjct: 97 ILNLYQFVQLYKDITSQAAGVLAQSETSEEAAESLTSVSSSQASLWMGRLKQPTDEDECC 156 Query: 432 ICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 ICM+ ++LP C H+ C +C W+ R +SCP CR Sbjct: 157 ICMDGRVDLILP-CAHSFCQKCIDKWSDRHRSCPVCR 192
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 48.5 bits (114), Expect = 1e-05 Identities = 28/103 (27%), Positives = 50/103 (48%) Frame = +3 Query: 243 ERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREE 422 E S K+F +I +L+ + K++K ++ + + E+ + ++D+ E E Sbjct: 356 ELNCSKKDFEKIIQAKNKELE------QTKEEK----DKVQAQKEEVLSHMNDL-LENEL 404 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 +C IC E + V NC H+ C C +W R CP CR ++ Sbjct: 405 QCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDI 447
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 45.8 bits (107), Expect = 8e-05 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3 Query: 405 DAEREEECGICMEMNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 DA + +C IC++ V L C H C RC Q+W+ CP C+ Sbjct: 96 DASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCK 142
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 45.8 bits (107), Expect = 8e-05 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3 Query: 405 DAEREEECGICMEMNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 DA + +C IC++ V L C H C RC Q+W+ CP C+ Sbjct: 97 DASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCK 143
>YBR2_YEAST (P38239) RING finger protein YBR062C| Length = 180 Score = 45.8 bits (107), Expect = 8e-05 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 9/113 (7%) Frame = +3 Query: 240 HERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAER- 416 H + + + P LQ + + +M DK + A C + + A SL ++ ++ Sbjct: 53 HSDSTLLLRLLSQMLPESLQ-EEWLQEM-DKGKSAGCPDTF-------AASLPRINKKKL 103 Query: 417 --EEECGICM------EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 + C IC E V LP+C H L C W SRS +CP CRDN+ Sbjct: 104 KATDNCSICYTNYLEDEYPLVVELPHCHHKFDLECLSVWLSRSTTCPLCRDNV 156
>IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)| Length = 286 Score = 45.4 bits (106), Expect = 1e-04 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = +3 Query: 336 QKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTH-AMCLRCYQDWN 512 Q ++ + +RD+D +D D E + EC +C+E VL C H +C++CY Sbjct: 209 QNSITVTHVDKRDDDNLNENAD-DIEEKYECKVCLERQRDAVLMPCRHFCVCVQCY---F 264 Query: 513 SRSQSCPFCRDNL 551 Q CP CR ++ Sbjct: 265 GLDQKCPTCRQDV 277
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 44.7 bits (104), Expect = 2e-04 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCRDNLNKTD 563 C IC E + V + C H MC C W S Q CPFCR + T+ Sbjct: 379 CKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 425
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 44.7 bits (104), Expect = 2e-04 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Frame = +3 Query: 306 RGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEE---CGICMEM-NSKVVLPNC 473 +G +++ Q V +R + E + V ++ EE C IC ++ + V L C Sbjct: 260 KGDGELDTNLQLLVSGQRGNAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPC 319 Query: 474 THAMCLRCYQDWNSRSQSCPFCR 542 H C CY W RS CP CR Sbjct: 320 MHTFCAACYSGWMERSSLCPTCR 342
>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) (RING finger protein 57) Length = 474 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +3 Query: 420 EECGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCR 542 E C IC E N V + C H +C C W +S SQ+CPFCR Sbjct: 349 ELCKICAESNKDVKIEPCGHLLCSCCLAAWQHSDSQTCPFCR 390
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 44.7 bits (104), Expect = 2e-04 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCRDNLNKTD 563 C IC E + V + C H MC C W S Q CPFCR + T+ Sbjct: 381 CKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 427
>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) Length = 982 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCRDNLNKTD 563 C IC E + V + C H MC C W S Q CPFCR + T+ Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFCRCEIKGTE 430
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCRDNLNKTD 563 C IC E + V + C H MC C W S Q CPFCR + T+ Sbjct: 386 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFCRCEIKGTE 432
>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING| finger protein 64) Length = 485 Score = 43.5 bits (101), Expect = 4e-04 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 16/67 (23%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKV---------VLPNCTHAMCLRCYQDWNSRSQ-------SCP 533 V +++ CGICME+ + +L NC H CL+C + W S + SCP Sbjct: 308 VQRSKDKVCGICMEVVYEKANPNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCP 367 Query: 534 FCRDNLN 554 CR N Sbjct: 368 QCRITSN 374
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCRDNLNKTD 563 C IC E + V + C H MC C W S Q CPFCR + T+ Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFCRCEIKGTE 419
>MKRN1_MACEU (Q9TT91) Makorin-1| Length = 478 Score = 43.1 bits (100), Expect = 5e-04 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 16/67 (23%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKV---------VLPNCTHAMCLRCYQDWNSRSQ-------SCP 533 V ++ CGICME+ + +L NC H CL+C + W S Q SCP Sbjct: 269 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 328 Query: 534 FCRDNLN 554 CR N Sbjct: 329 ECRITSN 335
>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)| Length = 482 Score = 43.1 bits (100), Expect = 5e-04 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 16/67 (23%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKV---------VLPNCTHAMCLRCYQDWNSRSQ-------SCP 533 V ++ CGICME+ + +L NC H CL+C + W S Q SCP Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332 Query: 534 FCRDNLN 554 CR N Sbjct: 333 ECRITSN 339
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCRDNLNKTD 563 C IC E + V + C H MC C W S Q CPFCR + T+ Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFCRCEIKGTE 419
>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) Length = 982 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCRDNLNKTD 563 C IC E + V + C H MC C W S Q CPFCR + T+ Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFCRCEIKGTE 419
>CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 43.1 bits (100), Expect = 5e-04 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Frame = +3 Query: 306 RGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEE---CGICMEM-NSKVVLPNC 473 RG D++ Q V R + E + ++ EE C IC ++ + V L C Sbjct: 261 RGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPC 320 Query: 474 THAMCLRCYQDWNSRSQSCPFCR 542 H C CY W RS CP CR Sbjct: 321 MHTFCAACYSGWMERSSLCPTCR 343
>MKRN3_HUMAN (Q13064) Makorin-3 (Zinc finger protein 127) (RING finger protein| 63) Length = 507 Score = 42.7 bits (99), Expect = 7e-04 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 16/99 (16%) Frame = +3 Query: 294 LQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKV----- 458 LQ + + ++ C+E + ++D S + V ++ CGICME+ + Sbjct: 271 LQTLHPMDAAQREEHMRACIEAH---EKDMELSFA-VQRGMDKVCGICMEVVYEKANPND 326 Query: 459 ----VLPNCTHAMCLRCYQDWNSRSQ-------SCPFCR 542 +L NC H+ C+RC + W S Q SCP CR Sbjct: 327 RRFGILSNCNHSFCIRCIRRWRSARQFENRIVKSCPQCR 365
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 42.7 bits (99), Expect = 7e-04 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = +3 Query: 378 DEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCRDN 548 +E TS S+ D EC IC++ V+ C H C C W +Q CP C+ Sbjct: 10 EEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSA 69 Query: 549 LN 554 ++ Sbjct: 70 ID 71
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 42.7 bits (99), Expect = 7e-04 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = +3 Query: 393 LSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRC-YQDWNSRSQS-CPFCRDNLNKTD 563 + D+ +EC IC+E VL C H MC C W S S CP CR L +T+ Sbjct: 1029 IQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPICRTILKRTE 1087
>MKRN1_MOUSE (Q9QXP6) Makorin-1| Length = 481 Score = 42.7 bits (99), Expect = 7e-04 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 16/67 (23%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKV---------VLPNCTHAMCLRCYQDWNSRSQ-------SCP 533 V ++ CGICME+ + +L NC H CL+C + W S Q SCP Sbjct: 273 VQRTKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332 Query: 534 FCRDNLN 554 CR N Sbjct: 333 ECRITSN 339
>MKRN2_MOUSE (Q9ERV1) Makorin-2| Length = 416 Score = 42.7 bits (99), Expect = 7e-04 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 16/99 (16%) Frame = +3 Query: 294 LQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKV----- 458 LQ+ + K + +CM + E E A +++ C ICME+ + Sbjct: 198 LQVLHPFDPEQRKAHEKMCMSTF----EHEMEKAFAFQASQDKVCSICMEVILEKASASE 253 Query: 459 ----VLPNCTHAMCLRCYQDWNSRSQ-------SCPFCR 542 +L NC+H CL C + W Q SCP CR Sbjct: 254 RRFGILSNCSHTYCLSCIRQWRCAKQFENPIIKSCPECR 292
>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)| Length = 544 Score = 42.7 bits (99), Expect = 7e-04 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 16/89 (17%) Frame = +3 Query: 324 EDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLP---------NCT 476 + + + C+E + R D S + V ++ CGICME+ + P +C Sbjct: 317 QQEAHRRACVEAHER---DMELSFA-VQRSMDKVCGICMEVVYEKADPTDRRFGILFSCN 372 Query: 477 HAMCLRCYQDWNSRSQ-------SCPFCR 542 H CLRC + W S +Q SCP CR Sbjct: 373 HTYCLRCIRRWRSATQFENRISKSCPQCR 401
>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein| ATL16) Length = 375 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 4/71 (5%) Frame = +3 Query: 354 ERYRRRDEDEATSLSDVDAEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRS 521 +RY + D + + +R +EC +C+ + ++PNC+H + C W + Sbjct: 114 KRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNN 173 Query: 522 QSCPFCRDNLN 554 +CP CR ++ Sbjct: 174 ANCPLCRTRVS 184
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRC-YQDW-NSRSQSCPFCRDNLNKTD 563 EC IC+E VL C H +C C W NS S CP CR+ ++K + Sbjct: 793 ECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTVSKQE 841
>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal| transduction protein CBL-B-A) (SH3-binding protein CBL-B-A) Length = 918 Score = 42.4 bits (98), Expect = 0.001 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCR 542 C IC E + V + C H MC C W S Q CPFCR Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFCR 423
>PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 306 Score = 42.4 bits (98), Expect = 0.001 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 369 RDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 RD ++ L + E +C +CME C H C C W S+ CP CR Sbjct: 238 RDLEDKNKLPFIP-EGNRKCSLCMEFIHCPAATECGHIFCWSCINGWTSKKSECPLCR 294
>ATL2D_ARATH (Q9SL78) Putative RING-H2 finger protein ATL2D precursor (RING-H2| finger protein ATL12) Length = 390 Score = 42.0 bits (97), Expect = 0.001 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = +3 Query: 423 ECGICMEMNSKV----VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTD 563 EC +C+ V +LP C HA + C W + +CP CR+ +N D Sbjct: 123 ECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIED 173
>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)| Length = 416 Score = 42.0 bits (97), Expect = 0.001 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 16/99 (16%) Frame = +3 Query: 294 LQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKV----- 458 LQ+ + K + +CM + E E A +++ C ICME+ + Sbjct: 198 LQVLHPFDPEQRKAHEKICMLTF----EHEMEKAFAFQASQDKVCSICMEVILEKASASE 253 Query: 459 ----VLPNCTHAMCLRCYQDWNSRSQ-------SCPFCR 542 +L NC H CL C + W Q SCP CR Sbjct: 254 RRFGILSNCNHTYCLSCIRQWRCAKQFENPIIKSCPECR 292
>ATL1A_ARATH (P93823) RING-H2 finger protein ATL1A| Length = 381 Score = 42.0 bits (97), Expect = 0.001 Identities = 17/82 (20%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Frame = +3 Query: 321 MEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICM----EMNSKVVLPNCTHAMC 488 +++ +A+ + ++++RD + + ++ +EC +C+ E ++PNC H Sbjct: 102 LDESAIRAIPVFKFKKRD---VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158 Query: 489 LRCYQDWNSRSQSCPFCRDNLN 554 + C W + +CP CR +++ Sbjct: 159 IDCIDIWLQGNANCPLCRTSVS 180
>CBLC_MOUSE (Q80XL1) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) Length = 496 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFCR 542 C IC E + V + C H +C C W +S SQ+CPFCR Sbjct: 350 CKICAERDKDVRIEPCGHLLCSCCLAAWQDSDSQTCPFCR 389
>ATL5N_ARATH (Q9FHG8) Putative RING-H2 finger protein ATL5N| Length = 210 Score = 41.6 bits (96), Expect = 0.002 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 +C +C+ + +LP C+HA + C W + +CP CRDNL Sbjct: 121 DCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNL 167
>ATL3D_ARATH (Q9SRM0) Probable RING-H2 finger protein ATL3D| Length = 158 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +3 Query: 405 DAEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 + E E+EC IC+ E VLP C+H C W SCP CR Sbjct: 100 EEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCR 149
>ATL2E_ARATH (Q9SJJ7) RING-H2 finger protein ATL2E| Length = 237 Score = 41.2 bits (95), Expect = 0.002 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = +3 Query: 411 EREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 +R E+C IC+ E + V+P+C H + C W S +CP CR N Sbjct: 135 QRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSN 184
>RAD5_USTMA (Q4PGG5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1387 Score = 40.8 bits (94), Expect = 0.003 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 8/119 (6%) Frame = +3 Query: 210 YVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRRRDEDEAT 389 +V G T ST + + + +F L + D + KA D+AT Sbjct: 1043 HVGGNGTPSTQDLRELVAQF------QLDEAGEAGDDSTESYTKATVERLIGEMHGDQAT 1096 Query: 390 SLSDVDAEREEECGICMEMN--SKVVLPNCTHAMCLRCYQDWNSRSQ------SCPFCR 542 + V ++ E EC IC+E + S LP C H+ C C D+ + + +CP CR Sbjct: 1097 -VPPVVSDGENECPICLEESQISPCYLPRCMHSACKACLVDYLGQCKQKGDQGACPTCR 1154
>ATL5I_ARATH (Q9FL07) RING-H2 finger protein ATL5I| Length = 376 Score = 40.8 bits (94), Expect = 0.003 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +3 Query: 408 AEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 A+ +C +C+ E + +LP C+HA L C W + +CP CR L Sbjct: 137 AQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTL 188
>ATL3C_ARATH (Q9SG96) RING-H2 finger protein ATL3C| Length = 181 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM---EMNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC IC+ E KV VLP C H +RC W SCP CR +L Sbjct: 113 ECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSL 159
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 40.4 bits (93), Expect = 0.003 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 6/73 (8%) Frame = +3 Query: 360 YRRRDE-DEATSLSDVDA-----EREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRS 521 YR RD+ + L+D E C +C+ C H C +C DW Sbjct: 217 YRFRDQTSDVIDLADPKVLPYLPEASRTCMLCLSPMKDPSCGECGHVFCWKCVLDWVKER 276 Query: 522 QSCPFCRDNLNKT 560 Q CP CR + ++ Sbjct: 277 QECPLCRAKMRES 289
>ATL4J_ARATH (Q5XF85) RING-H2 finger protein ATL4J precursor| Length = 432 Score = 40.4 bits (93), Expect = 0.003 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = +3 Query: 423 ECGICMEMNSKV----VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 +C +C+ V +LP C HA + C W + +CP CRD ++ Sbjct: 122 DCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVS 169
>ATL3I_ARATH (Q7X843) RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion| protein) Length = 349 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKV----VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTD 563 + E+ +C +C+ S +LP C+HA L C W + +CP CR +L+ ++ Sbjct: 199 ISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSN 256
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 40.4 bits (93), Expect = 0.003 Identities = 20/72 (27%), Positives = 27/72 (37%) Frame = +3 Query: 330 KKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDW 509 ++Q+A R R SL + R C +C+E C H C C W Sbjct: 241 QRQRARKEWRLHRGLSHRRASLEERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAW 300 Query: 510 NSRSQSCPFCRD 545 S CP CR+ Sbjct: 301 CSSKAECPLCRE 312
>ATL5M_ARATH (Q9FGJ6) RING-H2 finger protein ATL5M precursor| Length = 166 Score = 40.0 bits (92), Expect = 0.005 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +3 Query: 396 SDVD-AEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 SD++ A E EC IC+ + S VL C H ++C W S SCP CR ++ Sbjct: 96 SDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSI 152
>ATL4G_ARATH (Q8LF65) RING-H2 finger protein ATL4G (RING-H2 finger protein| ATL17) Length = 235 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +3 Query: 390 SLSDVDAEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 + S V A EC +C+ + S V+PNC H + C W SCP CR + Sbjct: 64 TFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQI 121
>ATL4L_ARATH (Q9ZT49) RING-H2 finger protein ATL4L (RING-H2 zinc finger protein| RHA3b) Length = 200 Score = 40.0 bits (92), Expect = 0.005 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = +3 Query: 378 DEATSLSDVDAEREEECGICMEMNSKV----VLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 D+ S D + EC IC+ S+ +LP C+HA + C W + SCP CR Sbjct: 97 DDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>ATL1D_ARATH (Q8GW38) RING-H2 finger protein ATL1D| Length = 369 Score = 40.0 bits (92), Expect = 0.005 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 +C +C+ E + +LPNC+HA + C W + +CP CR L Sbjct: 143 DCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTL 189
>ATL5F_ARATH (Q9LX93) RING-H2 finger protein ATL5F| Length = 301 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EC +C+ E S +LP C+HA L C W ++CP CR Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR 177
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 39.7 bits (91), Expect = 0.006 Identities = 20/72 (27%), Positives = 27/72 (37%) Frame = +3 Query: 330 KKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDW 509 ++Q+A R R SL + R C +C+E C H C C W Sbjct: 241 QRQRARKEWRLHRGLSHRRGSLEERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAW 300 Query: 510 NSRSQSCPFCRD 545 S CP CR+ Sbjct: 301 CSSKAECPLCRE 312
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 39.7 bits (91), Expect = 0.006 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +3 Query: 384 ATSLSDVDAEREEECGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 ++ S++D + + C ICM+ +++K VLP C H C C S CP C+ Sbjct: 547 SSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
>ATL2K_ARATH (Q9SLC4) RING-H2 finger protein ATL2K| Length = 217 Score = 39.7 bits (91), Expect = 0.006 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EC +C+ E ++ +LPNC H + C W + +CP CR Sbjct: 99 ECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>ATL2C_ARATH (Q9ZV53) Putative RING-H2 finger protein ATL2C| Length = 423 Score = 39.7 bits (91), Expect = 0.006 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM---EMNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 +C +C+ E K+ +LP C+HA + C W +CP CR NL Sbjct: 125 DCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNL 171
>ATL1L_ARATH (Q6NQG7) RING-H2 finger protein ATL1L| Length = 219 Score = 39.7 bits (91), Expect = 0.006 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +3 Query: 417 EEECGICME---MNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKT 560 + EC IC+ +V +LP C H +RC W S SCP CR L +T Sbjct: 128 DTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQT 179
>ATL2N_ARATH (O22255) RING-H2 finger protein ATL2N| Length = 227 Score = 39.3 bits (90), Expect = 0.008 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = +3 Query: 411 EREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E +EEC +C+ E + +LP C H+ + C W +CP CR Sbjct: 103 EEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCR 150
>ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)| Length = 305 Score = 39.3 bits (90), Expect = 0.008 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 8/72 (11%) Frame = +3 Query: 372 DEDEATSLSDVDAEREE-----ECGICME---MNSKVVLPNCTHAMCLRCYQDWNSRSQS 527 D+++ TSL V +E+ EC +C E + KV C H C W + Sbjct: 206 DKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDT 265 Query: 528 CPFCRDNLNKTD 563 CP CR +LN D Sbjct: 266 CPVCRKSLNGED 277
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 39.3 bits (90), Expect = 0.008 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 426 CGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFC 539 CGIC E N V++P C+H C C + + S CP C Sbjct: 25 CGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTC 63
>ATL3A_ARATH (Q9SRQ8) RING-H2 finger protein ATL3A| Length = 356 Score = 39.3 bits (90), Expect = 0.008 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Frame = +3 Query: 321 MEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICM----EMNSKVVLPNCTHAMC 488 +++ K++ + +YR+ D +S +C +C+ E S +LP C HA Sbjct: 134 LDESLIKSITVYKYRKMDGFVESS----------DCSVCLSEFQENESLRLLPKCNHAFH 183 Query: 489 LRCYQDWNSRSQSCPFCR 542 + C W +CP CR Sbjct: 184 VPCIDTWLKSHSNCPLCR 201
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 38.9 bits (89), Expect = 0.010 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%) Frame = +3 Query: 390 SLSD-VDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 S SD E +C +C+ C H C C +W + Q CP CR Sbjct: 314 STSDSTSTEAVGKCTLCLSTRQHPTATPCGHVFCWSCIMEWCNEKQECPLCR 365
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 38.9 bits (89), Expect = 0.010 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS-CPFCRDNLNKTD 563 +C IC+ + +++ C H C C RS+ CP CR +L ++D Sbjct: 634 DCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSD 681
>ATL1K_ARATH (P0C034) Putative RING-H2 finger protein ATL1K (RING-H2 finger| protein ATL10) Length = 251 Score = 38.5 bits (88), Expect = 0.013 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +3 Query: 417 EEECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKT 560 +EEC IC+ +LP C H +RC W + +CP CR+ L +T Sbjct: 132 DEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVET 183
>ATL4M_ARATH (Q8GT75) RING-H2 finger protein ATL4M (NEP1-interacting protein 1)| Length = 236 Score = 38.5 bits (88), Expect = 0.013 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Frame = +3 Query: 387 TSLSDVDAE-REEECGICME---MNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 T +++DA ++ C +C++ + V LP+C H L C +W R SCP CR +L Sbjct: 177 TGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>ATL3L_ARATH (Q9LZJ6) RING-H2 finger protein ATL3L (RING-H2 finger protein ATL5)| Length = 257 Score = 38.5 bits (88), Expect = 0.013 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%) Frame = +3 Query: 420 EECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EEC +C+ E + VLP C H + C W SCP CR Sbjct: 111 EECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCR 155
>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24| Length = 256 Score = 38.5 bits (88), Expect = 0.013 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +3 Query: 369 RDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 RD D ATS +D + C IC V+ C H C +C+ + + Q+C C N Sbjct: 189 RDADTATSRADSGIP--DTCPICQGEFKSPVVTQCCHYFCEKCFLAKHKKKQNCFVCGKN 246 Query: 549 LN 554 N Sbjct: 247 TN 248
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 38.5 bits (88), Expect = 0.013 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 420 EECGICME--MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E C IC+E N + LP C HA C C W ++ +CP C+ Sbjct: 6 ERCPICLEDPSNYSMALP-CLHAFCYVCITRWIRQNPTCPLCK 47
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 38.5 bits (88), Expect = 0.013 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 420 EECGICME--MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E C IC+E N + LP C HA C C W ++ +CP C+ Sbjct: 6 ERCPICLEDPSNYSMALP-CLHAFCYVCITRWIRQNPTCPLCK 47
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 38.5 bits (88), Expect = 0.013 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTD 563 CGIC E N +++P C+H C C + + S CP C + + D Sbjct: 25 CGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPD 71
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 38.5 bits (88), Expect = 0.013 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 9/57 (15%) Frame = +3 Query: 414 REEECGICMEMN---SKVVLPNCTHAMCLRC------YQDWNSRSQSCPFCRDNLNK 557 +E EC IC + ++ L C HA CL C +Q+ N + CP CR+ ++K Sbjct: 912 KESECSICTQSPIPLGEMALTPCGHAYCLNCVLEHFDFQEKNLQKPLCPNCREPISK 968
>ATL3F_ARATH (Q8L9T5) RING-H2 finger protein ATL3F (RING-H2 finger protein ATL2)| Length = 304 Score = 38.5 bits (88), Expect = 0.013 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Frame = +3 Query: 390 SLSDVDAEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 + SD + EC +C+ E + VLPNC H + C W +CP CR Sbjct: 107 TFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCR 161
>ATL5B_ARATH (Q9FLC6) Putative RING-H2 finger protein ATL5B precursor| Length = 176 Score = 38.5 bits (88), Expect = 0.013 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC IC+ E + VLP C H ++C W SCP CR +L Sbjct: 112 ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G| Length = 362 Score = 38.5 bits (88), Expect = 0.013 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 +C +C+ E S +LP C HA L C W +CP CR Sbjct: 141 DCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>ATL1B_ARATH (Q9LM69) RING-H2 finger protein ATL1B| Length = 197 Score = 38.1 bits (87), Expect = 0.017 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = +3 Query: 405 DAEREEECGICMEMNSKV----VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 ++E+ EC IC+ S VLP C H + C W SCP CR L Sbjct: 104 ESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQIL 156
>DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting| protein 3) (RNA-binding ubiquitin ligase of 138 kDa) (hRUL138) Length = 1208 Score = 38.1 bits (87), Expect = 0.017 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = +3 Query: 381 EATSLSDVDAEREEECGICMEMNSKV---VLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E S D + E EE C IC E S VLP C H +C + W + +CP CR Sbjct: 1133 EGASNPDEEEEEEEPCVICHENLSPENLSVLP-CAHKFHAQCIRPWLMQQGTCPTCR 1188
>ATL4K_ARATH (Q940Q4) RING-H2 finger protein ATL4K (RING-H2 finger protein| ATL13) Length = 472 Score = 38.1 bits (87), Expect = 0.017 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM---EMNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 +C +C+ E K+ +LP C+HA + C W +CP CR +L Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSL 179
>ATL2B_ARATH (Q8GT74) RING-H2 finger protein ATL2B (NEP1-interacting protein 2)| Length = 241 Score = 38.1 bits (87), Expect = 0.017 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Frame = +3 Query: 387 TSLSDVDA-EREEECGICME---MNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 T ++ DA E + C +C++ + V LP+C H L C +W R SCP CR ++ Sbjct: 182 TGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>ATL1O_ARATH (Q8LFY8) RING-H2 finger protein ATL1O (RING-H2 finger protein| ATL11) Length = 413 Score = 38.1 bits (87), Expect = 0.017 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 +C +C+ E S +LP C HA + C W S +CP CR Sbjct: 176 DCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
>RNF41_XENLA (Q5FWL3) RING finger protein 41| Length = 317 Score = 38.1 bits (87), Expect = 0.017 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 405 DAEREEECGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 D + + C IC + V P+C HA C C W S+ Q+CP R Sbjct: 11 DVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDR 57
>RNF41_MOUSE (Q8BH75) RING finger protein 41| Length = 317 Score = 38.1 bits (87), Expect = 0.017 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 405 DAEREEECGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 D + + C IC + V P+C HA C C W S+ Q+CP R Sbjct: 11 DVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDR 57
>RNF41_HUMAN (Q9H4P4) RING finger protein 41| Length = 317 Score = 38.1 bits (87), Expect = 0.017 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 405 DAEREEECGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 D + + C IC + V P+C HA C C W S+ Q+CP R Sbjct: 11 DVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDR 57
>ATL4D_ARATH (Q9M0R4) Putative RING-H2 finger protein ATL4D precursor| Length = 357 Score = 38.1 bits (87), Expect = 0.017 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = +3 Query: 423 ECGICM-EMNSKVVL---PNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 EC IC+ E + L P C+H C +W S +CP CR NL+ Sbjct: 119 ECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLS 166
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 37.7 bits (86), Expect = 0.023 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +3 Query: 393 LSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNK 557 L+D+D+ C IC +M VL C H C C +++ ++ CP C L + Sbjct: 23 LADLDSLLR--CHICKDMLQTPVLTQCGHTFCSLCIREYLNKESRCPLCLAELRQ 75
>RAD5_GIBZE (Q4IJ84) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1154 Score = 37.7 bits (86), Expect = 0.023 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 8/68 (11%) Frame = +3 Query: 384 ATSLSDVDAEREEECGICME--MNSKVVLPNCTHAMCLRCYQDW------NSRSQSCPFC 539 A +L + E E EC +C E MN + V C H+ C +C D+ + C C Sbjct: 886 AHALEQIRDEAENECPLCFEEPMNDQTV-TGCWHSACKKCLLDYIKHQTDKAEVPRCFSC 944 Query: 540 RDNLNKTD 563 R+ +NK D Sbjct: 945 REPINKRD 952
>ZN364_HUMAN (Q9Y4L5) Zinc finger protein 364 (Rabring 7) (RING finger protein| 115) Length = 304 Score = 37.7 bits (86), Expect = 0.023 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%) Frame = +3 Query: 372 DEDEATSLSDVDAEREE-----ECGICME---MNSKVVLPNCTHAMCLRCYQDWNSRSQS 527 D+++ TSL V +E+ EC +C E + +V C H C W + Sbjct: 205 DKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDT 264 Query: 528 CPFCRDNLNKTD 563 CP CR +LN D Sbjct: 265 CPVCRKSLNGED 276
>ATL2L_ARATH (Q9SLC3) RING-H2 finger protein ATL2L| Length = 236 Score = 37.7 bits (86), Expect = 0.023 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = +3 Query: 396 SDVDAEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 +D A EC +C+ E + LPNC H + C W + +CP CR Sbjct: 98 TDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCR 150
>ATL1R_ARATH (Q8LC69) RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8)| Length = 185 Score = 37.7 bits (86), Expect = 0.023 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Frame = +3 Query: 408 AEREEECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 AE+ EC IC+ + VLP C H + C W SCP CR L Sbjct: 98 AEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQIL 149
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 37.4 bits (85), Expect = 0.029 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLN 554 +EEC IC++ + V+ +C H C C Q CP CR++++ Sbjct: 754 DEECAICLDSLTVPVITHCAHVFCKPCICQCIQNEQPHAKCPLCRNDIH 802
>BRAP_HUMAN (Q7Z569) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) (RING finger protein 52) (NY-REN-63 antigen) Length = 592 Score = 37.4 bits (85), Expect = 0.029 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Frame = +3 Query: 306 RGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSK----VVLPNC 473 R +ED + V +ER ++ SL +D +C +C+E + ++ C Sbjct: 224 RQFNSIEDDVCQLVYVERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLC 283 Query: 474 THAMCLRCYQDWNSRSQSCPFCR 542 H+ +C Q W+ +CP CR Sbjct: 284 NHSFHSQCLQRWD--DTTCPVCR 304
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 37.4 bits (85), Expect = 0.029 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 +EEC IC++ + V+ +C H C C Q CP CR+++++ Sbjct: 757 DEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHE 806
>BRAP_MOUSE (Q99MP8) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) Length = 591 Score = 37.4 bits (85), Expect = 0.029 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Frame = +3 Query: 306 RGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSK----VVLPNC 473 R +ED + V +ER ++ SL +D +C +C+E + ++ C Sbjct: 223 RQFNSIEDDVCQLVYVERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLC 282 Query: 474 THAMCLRCYQDWNSRSQSCPFCR 542 H+ +C Q W+ +CP CR Sbjct: 283 NHSFHSQCLQRWD--DTTCPVCR 303
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 37.4 bits (85), Expect = 0.029 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 8/87 (9%) Frame = +3 Query: 318 DMEDKKQKAVCMERYRRRD-EDEATSLSDVDAEREEECGICMEMNSKVVL-------PNC 473 D E K K V + + R +DE T+ + C ICM+ S++V C Sbjct: 101 DEELSKDKDVYVTTHTPRSTKDEGTT--GLRPSGTVSCPICMDGYSEIVQNGRLIVSTEC 158 Query: 474 THAMCLRCYQDWNSRSQSCPFCRDNLN 554 H C +C +D + +CP CR +N Sbjct: 159 GHVFCSQCLRDSLKNANTCPTCRKKIN 185
>ATL4B_ARATH (Q9M0R6) Putative RING-H2 finger protein ATL4B precursor| Length = 302 Score = 37.4 bits (85), Expect = 0.029 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = +3 Query: 423 ECGICM-EMNSKVVL---PNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 EC IC+ E K L P C+H C W S +CP CR NL+ Sbjct: 122 ECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANLS 169
>ATL5C_ARATH (Q5EAE9) RING-H2 finger protein ATL5C precursor| Length = 407 Score = 37.0 bits (84), Expect = 0.038 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Frame = +3 Query: 423 ECGICMEMNSKV----VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTD 563 EC +C+ +LP C HA + C W +CP CR ++ D Sbjct: 145 ECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED 195
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 37.0 bits (84), Expect = 0.038 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = +3 Query: 423 ECGICMEM--NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFC 539 +C IC+++ LP C H CL C Q W S +CP C Sbjct: 45 DCPICLDVAATEAQTLP-CMHKFCLDCIQRWTLTSTACPLC 84
>ATL5O_ARATH (Q9LUZ9) Putative RING-H2 finger protein ATL5O| Length = 308 Score = 37.0 bits (84), Expect = 0.038 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = +3 Query: 396 SDVDAEREEECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 ++ + + EEEC IC+ + + L NC H + C W S +CP CR Sbjct: 128 NEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCR 180
>ATL3K_ARATH (Q9M313) RING-H2 finger protein ATL3K| Length = 212 Score = 36.6 bits (83), Expect = 0.050 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +3 Query: 414 REEECGIC----MEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 RE C IC ME ++P C H + C W + SCP CR++ Sbjct: 132 RETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNS 180
>ATL1J_ARATH (Q6NML0) RING-H2 finger protein ATL1J| Length = 225 Score = 36.6 bits (83), Expect = 0.050 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = +3 Query: 420 EECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKT 560 EEC IC+ +LP C H +RC W +CP CR L +T Sbjct: 133 EECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVET 183
>ATL3B_ARATH (Q8RXX9) RING-H2 finger protein ATL3B precursor (RING-H2 finger| protein ATL6) Length = 398 Score = 36.6 bits (83), Expect = 0.050 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 8/60 (13%) Frame = +3 Query: 396 SDVDAER----EEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 SDV ++ E EC IC+ + + +LP C H C W +CP CR NL Sbjct: 114 SDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 36.6 bits (83), Expect = 0.050 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%) Frame = +3 Query: 405 DAEREEE------CGICMEMNSKVVLPNCTHAMCLRC-YQDWNS-RSQSCPFCRD 545 D +EEE C +C+E+ K ++ +C H C C ++ N R CP CRD Sbjct: 13 DESQEEEIPDQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRD 67
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 36.6 bits (83), Expect = 0.050 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 9/58 (15%) Frame = +3 Query: 411 EREEECGICMEMN---SKVVLPNCTHAMCLRC------YQDWNSRSQSCPFCRDNLNK 557 + E EC IC ++ S++V+ C H CL C +Q + + CP CR ++K Sbjct: 811 KEENECSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKELKKEKLCPNCRSPISK 868
>ATL4O_ARATH (Q8W571) RING-H2 finger protein ATL4O precursor| Length = 322 Score = 36.6 bits (83), Expect = 0.050 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = +3 Query: 414 REEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 ++ EC IC+ + + +LP C H + C W +CP CR NL Sbjct: 119 KDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 168
>ATL1M_ARATH (P0C035) Putative RING-H2 finger protein ATL1M| Length = 310 Score = 36.6 bits (83), Expect = 0.050 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTD 563 EC +C+ + + VLP C H + C W +CP CR+ + + Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVE 169
>ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precursor| Length = 327 Score = 36.6 bits (83), Expect = 0.050 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC IC+ + + ++P C+HA C W S +CP CR +L Sbjct: 127 ECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 36.6 bits (83), Expect = 0.050 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Frame = +3 Query: 303 QRGITDMEDKKQKAVCMERYRRRDEDEATSLSDV-DAEREEECGICMEMNSKVVLPNCTH 479 +R I + E + +KA E+ ++ A+SL D E C +C+E+ V+ C H Sbjct: 106 KRKIEEPEPEPKKAKVEEKDASKN---ASSLGAAGDFAEELTCPLCVELFKDPVMVACGH 162 Query: 480 AMCLRCY-QDWNSRSQ-SCPFCRDNL 551 C C + W +S +CP CR+++ Sbjct: 163 NFCRSCIDKAWEGQSSFACPECRESI 188
>ATL5J_ARATH (Q8L9W3) RING-H2 finger protein ATL5J| Length = 163 Score = 36.6 bits (83), Expect = 0.050 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Frame = +3 Query: 414 REEECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 R EC +C+E S ++P C H C W S CP CR L Sbjct: 100 RSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRAEL 149
>AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2.19) (AMF| receptor) Length = 643 Score = 36.6 bits (83), Expect = 0.050 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +3 Query: 408 AEREEECGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTD 563 A ++C IC + M + LP C H C + W + SCP CR +LN D Sbjct: 335 AVNNDDCAICWDSMQAARKLP-CGHLFHNSCLRSWLEQDTSCPTCRMSLNIAD 386
>AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-)| (AMF receptor) (gp78) Length = 643 Score = 36.6 bits (83), Expect = 0.050 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +3 Query: 408 AEREEECGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTD 563 A ++C IC + M + LP C H C + W + SCP CR +LN D Sbjct: 335 AVNNDDCAICWDSMQAARKLP-CGHLFHNSCLRSWLEQDTSCPTCRMSLNIAD 386
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 36.6 bits (83), Expect = 0.050 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = +3 Query: 417 EEECGICMEMNSKV--VLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 + C ICM S + +P C H C C + W S S CP CR Sbjct: 16 DNTCTICMSTVSDLGKTMP-CLHDFCFVCIRAWTSTSVQCPLCR 58
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 36.2 bits (82), Expect = 0.066 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 7/50 (14%) Frame = +3 Query: 426 CGICMEMNSKVVL-------PNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 C ICM+ S++V C H C +C +D + +CP CR +N Sbjct: 136 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 185
>RAPSN_MOUSE (P12672) 43 kDa receptor-associated protein of the synapse (RAPsyn)| (Acetylcholine receptor-associated 43 kDa protein) (43 kDa postsynaptic protein) Length = 411 Score = 36.2 bits (82), Expect = 0.066 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Frame = +3 Query: 411 EREEECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E E CG+C E NS++ C+H LRC Q N+ ++SCP CR Sbjct: 357 ETELYCGLCGESIGERNSRLQALPCSHIFHLRCLQ--NNGTRSCPNCR 402
>RAPSN_HUMAN (Q13702) 43 kDa receptor-associated protein of the synapse (RAPsyn)| (Acetylcholine receptor-associated 43 kDa protein) (43 kDa postsynaptic protein) Length = 411 Score = 36.2 bits (82), Expect = 0.066 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Frame = +3 Query: 411 EREEECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E E CG+C E NS++ C+H LRC Q N+ ++SCP CR Sbjct: 357 ETELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQ--NNGTRSCPNCR 402
>ATL4C_ARATH (Q9M0R5) Putative RING-H2 finger protein ATL4C precursor| Length = 345 Score = 36.2 bits (82), Expect = 0.066 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 EC IC+ + + +P C+H C W S +CP CR NL+ Sbjct: 122 ECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLS 169
>ATL5A_ARATH (Q9LZV8) RING-H2 finger protein ATL5A| Length = 159 Score = 36.2 bits (82), Expect = 0.066 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC IC+ + VLP C H+ + C W SCP CR +L Sbjct: 104 ECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>ATL1I_ARATH (Q94BY6) RING-H2 finger protein ATL1I| Length = 226 Score = 36.2 bits (82), Expect = 0.066 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +3 Query: 420 EECGICME---MNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKT 560 EEC IC+ ++ +LP C H +RC W + +CP CR L +T Sbjct: 134 EECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVET 184
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 36.2 bits (82), Expect = 0.066 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 C IC+E + C H C RC Q++ +S + SCP CR Sbjct: 23 CSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCR 64
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 36.2 bits (82), Expect = 0.066 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 C IC+E + C H C RC Q++ +S + SCP CR Sbjct: 23 CSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCR 64
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 36.2 bits (82), Expect = 0.066 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Frame = +3 Query: 327 DKKQKAVCMERYRRRDEDEATSLSDV---DAEREEECGICMEMNSKVVLPNCTHAMCLRC 497 D + +V R ++D + S++ D +++ C ICM++ L C H+ C C Sbjct: 16 DPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHSFCYMC 75 Query: 498 YQDWNSRSQSCPFCRDNL 551 CP C +L Sbjct: 76 IITHLRNKSDCPCCSQHL 93
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 36.2 bits (82), Expect = 0.066 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +3 Query: 381 EATSLSDV-DAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E T L ++ + + + C IC E V+ +C H C C +++ + CP C+ Sbjct: 20 EPTKLPNLKELDSLQRCYICKEFLKAPVITSCNHTFCSHCIREYLIVNSHCPLCK 74
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 36.2 bits (82), Expect = 0.066 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 7/50 (14%) Frame = +3 Query: 426 CGICMEMNSKVVL-------PNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 C ICM+ S++V C H C +C +D + +CP CR +N Sbjct: 132 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 181
>ATL4N_ARATH (Q9SZL4) Putative RING-H2 finger protein ATL4N precursor| Length = 145 Score = 36.2 bits (82), Expect = 0.066 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%) Frame = +3 Query: 405 DAEREEE--CGICM---EMNSKVV-LPNCTHAMCLRCYQDWNSRSQ-SCPFCR 542 D E+EEE C IC+ E V LP C H + C + W R +CP CR Sbjct: 53 DKEKEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCR 105
>ATL2A_ARATH (O22755) RING-H2 finger protein ATL2A (RING-H2 zinc finger protein| RHA3a) Length = 185 Score = 36.2 bits (82), Expect = 0.066 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +3 Query: 381 EATSLSDVDAEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E+TS + + EC IC+ + VLP C H+ + C W SCP CR Sbjct: 87 ESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>ATL1P_ARATH (Q9XF63) RING-H2 finger protein ATL1P (RING-H2 finger protein ATL3)| Length = 324 Score = 35.8 bits (81), Expect = 0.086 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICMEMNSKV----VLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC IC+ K +LP C H+ + C W +CP CR+ + Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 35.8 bits (81), Expect = 0.086 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Frame = +3 Query: 318 DMEDKKQKAVCMERYRRRDEDEATSLSDVDAERE-----EECGICMEMNSKVVLPNCTHA 482 + E +K K + RD + +LS+ E E C IC L C H Sbjct: 610 ETEVEKMKVRLEHAQKDRDNWKNKALSNSSEEEEMLRTFALCTICRNNFKNTALKTCGHL 669 Query: 483 MCLRCYQD-WNSRSQSCPFCRDNLNKTD 563 C +C D ++R + CP C +K D Sbjct: 670 FCNQCVDDRISNRMRKCPTCSRAFDKMD 697
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 35.4 bits (80), Expect = 0.11 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +3 Query: 393 LSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKT 560 L+D+D+ C IC + VL C H+ C C + + + CP C +L ++ Sbjct: 23 LTDLDSLLR--CHICKDFLKASVLTPCGHSFCSICIRKYLQKESKCPLCLSDLTES 76
>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)| Length = 423 Score = 35.4 bits (80), Expect = 0.11 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 24/84 (28%) Frame = +3 Query: 363 RRRDEDEATSLSDVDAER--------EEECGICMEMNSKV---------VLPNCTHAMCL 491 RR E + + D E+ ++ C ICME+ + +L +C H CL Sbjct: 206 RRAHEKMCLAAFEADMEKAFAAQLSQDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCL 265 Query: 492 RCYQDW-------NSRSQSCPFCR 542 C + W N+ +SCP CR Sbjct: 266 ACIRKWRCTRTFSNTIIKSCPECR 289
>DZIP3_MOUSE (Q7TPV2) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting| protein 3 homolog) Length = 1204 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = +3 Query: 399 DVDAEREEECGICMEMNSKV---VLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 D + E EE C IC E S VLP C H +C + W + +CP CR Sbjct: 1135 DNEEEEEEPCVICHENLSPENLSVLP-CAHKFHSQCIRPWLMQQGTCPTCR 1184
>ATL3E_ARATH (Q9LUL6) Putative RING-H2 finger protein ATL3E| Length = 204 Score = 35.4 bits (80), Expect = 0.11 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 EC +C+ + + VLP+C H + C W + +CP CR Sbjct: 87 ECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICR 130
>TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (dTopors) Length = 1038 Score = 35.4 bits (80), Expect = 0.11 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Frame = +3 Query: 426 CGICMEM-NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 C IC+ K +C H C +C +W+ CP C+ Sbjct: 102 CAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPECPLCK 141
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 35.4 bits (80), Expect = 0.11 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLN 554 +EEC IC++ + V+ +C H C C Q CP CR+ ++ Sbjct: 751 DEECAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLCRNEIH 799
>ATL5P_ARATH (Q9FKX5) RING-H2 finger protein ATL5P| Length = 221 Score = 35.4 bits (80), Expect = 0.11 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +3 Query: 426 CGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 C +C++ + LP+C H L C W R SCP CR +L Sbjct: 176 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 35.4 bits (80), Expect = 0.11 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 11/92 (11%) Frame = +3 Query: 312 ITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAER--EEECGICMEM---NSKVVLPNCT 476 I D E+++ + E E+ +D+ + EC IC +S V+ C Sbjct: 857 IPDTEEEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECE 916 Query: 477 HAMCLRCYQDWN------SRSQSCPFCRDNLN 554 H C C +++ S Q CP CR ++N Sbjct: 917 HVFCKECLEEYGNFQKEKSLQQKCPNCRRDIN 948
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 35.4 bits (80), Expect = 0.11 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +3 Query: 420 EECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 + C IC ++ + V C H C +C +++ R CP C+ Sbjct: 27 KRCYICKDLLNAPVRTQCDHTYCSQCIREFLLRDNRCPLCK 67
>YQOE_CAEEL (Q95QN6) Hypothetical RING finger protein EEED8.16 in chromosome II| Length = 590 Score = 35.0 bits (79), Expect = 0.15 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Frame = +3 Query: 351 MERYRRRDEDEATSLSDVDAEREEECGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQS 527 ++R ++ S D C +C+E M+ V+ C H+ RC + W + Sbjct: 235 VDRIECTTSNDLFSSDDTSLTELPTCAVCLERMDDSVLAILCNHSFHARCLEQW--ADNT 292 Query: 528 CPFCR 542 CP CR Sbjct: 293 CPVCR 297
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 35.0 bits (79), Expect = 0.15 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKT 560 C IC + VL C H C C + + S CP C L ++ Sbjct: 27 CHICKDFLKNPVLTPCGHTFCSLCIRGYLSNEPKCPLCLHELRES 71
>ATL3G_ARATH (Q67YI6) RING-H2 finger protein ATL3G| Length = 411 Score = 35.0 bits (79), Expect = 0.15 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 +C +C+ E + LP C HA L C +W +CP CR Sbjct: 155 DCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCR 198
>ZFP_IRV6 (P47732) Zinc finger protein| Length = 208 Score = 35.0 bits (79), Expect = 0.15 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +3 Query: 369 RDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 +D D+ ++ SD D C IC VL C H+ C C + Q+CP C++N Sbjct: 147 QDLDQNSTTSDCDVLT---CKICFTNKITKVLIPCGHSSCYECV----FKLQTCPICKNN 199 Query: 549 LNK 557 K Sbjct: 200 FIK 202
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 35.0 bits (79), Expect = 0.15 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +3 Query: 411 EREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRS---QSCPFCRDNLNK 557 + E C IC+++ K V +C H CL+C S CP C+ ++ K Sbjct: 11 QEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 62
>CHD4_MOUSE (Q6PDQ2) Chromodomain helicase-DNA-binding protein 4 (CHD-4)| Length = 1915 Score = 35.0 bits (79), Expect = 0.15 Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Frame = +3 Query: 309 GITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMC 488 G T + +K + + +++ E+E T++ + + ++ C +C + ++ C A Sbjct: 327 GSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYH 386 Query: 489 LRCYQDWNSRSQ----SCPFC 539 + C ++ SCP C Sbjct: 387 MVCLDPDMEKAPEGKWSCPHC 407
>ATL4H_ARATH (P0C041) Putative RING-H2 finger protein ATL4H| Length = 336 Score = 35.0 bits (79), Expect = 0.15 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 +C IC+ E S +LP C H + C W +CP CR Sbjct: 180 DCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCR 223
>CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 (EC 3.6.1.-)| (ATP-dependent helicase CHD4) (CHD-4) (Mi-2 autoantigen 218 kDa protein) (Mi2-beta) Length = 1912 Score = 35.0 bits (79), Expect = 0.15 Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Frame = +3 Query: 309 GITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMC 488 G T + +K + + +++ E+E T++ + + ++ C +C + ++ C A Sbjct: 334 GSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYH 393 Query: 489 LRCYQDWNSRSQ----SCPFC 539 + C ++ SCP C Sbjct: 394 MVCLDPDMEKAPEGKWSCPHC 414
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 35.0 bits (79), Expect = 0.15 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +3 Query: 375 EDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDW-NSRSQSCPFC 539 + + + L DVD C IC E + ++ C H C C Q + + SQ CP C Sbjct: 13 DSKLSGLKDVDETLR--CHICKEFFTAPMITGCGHTFCSLCIQRYLTNTSQRCPTC 66
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 34.7 bits (78), Expect = 0.19 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 E C +C+E + V+ C H C C W R CP CR Sbjct: 26 EASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCR 70
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 34.7 bits (78), Expect = 0.19 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 E C +C+E + V+ C H C C W R CP CR Sbjct: 26 EASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCR 70
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 34.7 bits (78), Expect = 0.19 Identities = 13/44 (29%), Positives = 19/44 (43%) Frame = +3 Query: 411 EREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E+ C +C + +L +C H C C + S CP CR Sbjct: 29 EQAFRCHVCKDFYDSPMLTSCNHTFCSLCIRRCLSVDSKCPLCR 72
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 34.7 bits (78), Expect = 0.19 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = +3 Query: 417 EEECGICMEMNSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 E C +C+E + V+ C H C C W R CP CR Sbjct: 26 EASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCR 70
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 34.7 bits (78), Expect = 0.19 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 8/57 (14%) Frame = +3 Query: 402 VDAEREE--------ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 +D ++EE +C +C E + V NC H C +C+ + +SC C +N Sbjct: 149 IDEQKEETRKEAVPFKCVLCKESYERPVKTNCGHYFCQKCFVNRIKIDKSCFICGEN 205
>YR311_MIMIV (Q5UPZ3) Hypothetical RING finger protein R311| Length = 659 Score = 34.7 bits (78), Expect = 0.19 Identities = 13/50 (26%), Positives = 25/50 (50%) Frame = +3 Query: 405 DAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 D+ ++ +C +C + + C H +CL C + S+ CP C + +N Sbjct: 495 DSIKDNDCPVCYDDDYIKTKLICGHTVCLTCVLNILPNSKGCPLCMEPIN 544
>LRSM1_HUMAN (Q6UWE0) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich| repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) (hTAL) Length = 723 Score = 34.7 bits (78), Expect = 0.19 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCL-RCYQDWNSRSQSCPFCRDNL 551 EC +C+E ++++ NC H C +C Q ++CP CR ++ Sbjct: 674 ECVVCLEREAQMIFLNCGHVCCCQQCCQP----LRTCPLCRQDI 713
>ATL1E_ARATH (Q9C7E9) Putative RING-H2 finger protein ATL1E| Length = 336 Score = 34.7 bits (78), Expect = 0.19 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%) Frame = +3 Query: 426 CGICM-EMNSKVV---LPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 C IC+ E SK +P C H ++C +W SCP CR++ Sbjct: 290 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCRNS 334
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 34.3 bits (77), Expect = 0.25 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 372 DEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 ++ + SL +D+ C IC E ++ +C+H C C +D+ CP CR Sbjct: 13 NQTKIPSLKGLDSSLR--CLICHEYFRAPLITSCSHTFCSFCIRDYLREHPMCPACR 67
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 34.3 bits (77), Expect = 0.25 Identities = 13/46 (28%), Positives = 17/46 (36%) Frame = +3 Query: 411 EREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 E +C +C+ S C H C C W CP CR + Sbjct: 281 EASRKCILCLMNMSDPSCAPCGHLFCWSCLMSWCKERPECPLCRQH 326
>ATL4A_ARATH (Q9M0R7) Putative RING-H2 finger protein ATL4A| Length = 132 Score = 34.3 bits (77), Expect = 0.25 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +3 Query: 417 EEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E EC +C+ + + ++P C H C W S S +CP CR Sbjct: 82 ELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICR 127
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 34.3 bits (77), Expect = 0.25 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = +3 Query: 411 EREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 E C +C + V+ +C+H C C + S CP CR + Sbjct: 25 ETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCRSS 70
>ATL5H_ARATH (Q8LGA5) RING-H2 finger protein ATL5H precursor| Length = 368 Score = 34.3 bits (77), Expect = 0.25 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC IC+ + + +LP C H C W +CP CR NL Sbjct: 123 ECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 34.3 bits (77), Expect = 0.25 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRS------QSCPFCR 542 V+ + E C IC+E+ ++ + +C H+ C C + +S SCP CR Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 34.3 bits (77), Expect = 0.25 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = +3 Query: 384 ATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS---CPFCRDNLN 554 A L+ + + + +C IC+E+ + ++ C H+ C C + S CP CR +++ Sbjct: 2 AWQLTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVD 61
>MKRN2_BRARE (Q9DFG8) Makorin-2| Length = 414 Score = 34.3 bits (77), Expect = 0.25 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 16/88 (18%) Frame = +3 Query: 327 DKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKV---------VLPNCTH 479 D +Q+A ++ E + V +++ C IC+++ + +L +C H Sbjct: 204 DPEQRAAHEKKCMVAFEMDMERAFAVQQSQDKVCKICLDVVYEKSSPSERRFGILSSCAH 263 Query: 480 AMCLRCYQDW-------NSRSQSCPFCR 542 CL C + W N +SCP CR Sbjct: 264 TYCLNCIRQWRCVEQLHNQIRKSCPECR 291
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 34.3 bits (77), Expect = 0.25 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = +3 Query: 423 ECGICM-EMNSKVVL----PNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 EC IC+ E + +L C H C W +++CP CR NL+ Sbjct: 113 ECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLD 161
>UB7I3_RAT (Q62921) Ubiquitin-conjugating enzyme 7-interacting protein 3 (RBCC| protein interacting with PKC) (Protein kinase C-binding protein beta-15) Length = 498 Score = 34.3 bits (77), Expect = 0.25 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 15/83 (18%) Frame = +3 Query: 333 KQKAVCMERYRRRDEDEATSLSDVDAEREE--------ECGICMEM---NSKVVLPNCTH 479 +++A+ R++ + E L V E+ EC +C + VVL C H Sbjct: 231 EEEALRQYEQRKQQQQEGNYLQHVQLEQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLH 290 Query: 480 AMCLRCYQDWNSRSQ----SCPF 536 C C Q SQ SCPF Sbjct: 291 TFCRECLQGTIRNSQEAEVSCPF 313
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 34.3 bits (77), Expect = 0.25 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRS-------QSCPFCR 542 VD E+E C IC+E+ ++ + +C H+ C C S SCP C+ Sbjct: 7 VDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQ 60
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 34.3 bits (77), Expect = 0.25 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQD--WNSRSQSCPFCR 542 +C +C+E+ + V C H C C N+ +CP+CR Sbjct: 35 DCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYCR 76
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 34.3 bits (77), Expect = 0.25 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = +3 Query: 411 EREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 E C +C + V+ +C+H C C + S CP CR + Sbjct: 25 ESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSS 70
>ATL3J_ARATH (Q9LY41) RING-H2 finger protein ATL3J (RING-H2 finger protein ATL4)| (RING-H2 finger protein RHX1a) Length = 334 Score = 34.3 bits (77), Expect = 0.25 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICMEM----NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 +C +C+ + +LP C HA C W +Q+CP CR L Sbjct: 116 DCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPL 162
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 33.9 bits (76), Expect = 0.33 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Frame = +3 Query: 384 ATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS---CPFCRDNLN 554 ATS E E C IC++ V +C H C C D S S CP C+ Sbjct: 2 ATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFK 61 Query: 555 K 557 K Sbjct: 62 K 62
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 33.9 bits (76), Expect = 0.33 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Frame = +3 Query: 384 ATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS---CPFCRDNLN 554 ATS E E C IC++ V +C H C C D S S CP C+ Sbjct: 2 ATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFK 61 Query: 555 K 557 K Sbjct: 62 K 62
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 33.9 bits (76), Expect = 0.33 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = +3 Query: 375 EDEAT-SLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 ED+A + + D E+C IC ++ C H C C +S CP C+ N Sbjct: 223 EDDANYEIHEGDDTFPEDCFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPICQQN 281
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 33.9 bits (76), Expect = 0.33 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKVVLPNCTHAMCLRC---YQDWNSRS--QSCPFCRDNLNKT 560 +D + ++ C IC++ + V +C H C C + D S S SCP CR ++T Sbjct: 4 LDKDNQDICPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKPCSET 61
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 33.9 bits (76), Expect = 0.33 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = +3 Query: 426 CGICMEM--NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 C IC++ + LP C HA CL C + W +CP C+ Sbjct: 13 CCICLDAITGAARALP-CLHAFCLACIRRWLEGRPTCPLCK 52
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 33.9 bits (76), Expect = 0.33 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = +3 Query: 426 CGICMEM--NSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 C IC++ + LP C HA CL C + W +CP C+ Sbjct: 13 CCICLDAITGAARALP-CLHAFCLACIRRWLEGRPTCPLCK 52
>BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (MIAP2) (MIAP-2) Length = 612 Score = 33.9 bits (76), Expect = 0.33 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 1/125 (0%) Frame = +3 Query: 189 RILIYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRR 368 R LI V V G + K S+KE + ++ +L +++ + + + + +E R Sbjct: 501 RELIDTVLVKGNAAANIF--KNSLKEIDSTLYENLF-VEKNMKYIPTEDVSGLSLEEQLR 557 Query: 369 RDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTH-AMCLRCYQDWNSRSQSCPFCRD 545 R ++E T C +CM+ +V C H +C C + CP CR Sbjct: 558 RLQEERT------------CKVCMDREVSIVFIPCGHLVVCQECAPS----LRKCPICRG 601 Query: 546 NLNKT 560 + T Sbjct: 602 TIKGT 606
>ATL1Q_ARATH (Q8LBA0) RING-H2 finger protein ATL1Q| Length = 223 Score = 33.9 bits (76), Expect = 0.33 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = +3 Query: 396 SDVDAEREEECGICME--MNSKVV--LPNCTHAMCLRCYQDWNSRSQSCPFCR 542 S++ + C IC++ ++ LP C H L C W R SCP CR Sbjct: 166 SEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICR 218
>BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell| apoptosis protein) Length = 611 Score = 33.9 bits (76), Expect = 0.33 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 1/125 (0%) Frame = +3 Query: 189 RILIYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRR 368 R LI V V G S +K+F V++ L +++ + + + + ME R Sbjct: 500 RELIDTVLVKGNAAASIFRN--CLKDFDPVLYKDLF-VEKSMKYVPTEDVSGLPMEEQLR 556 Query: 369 RDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTH-AMCLRCYQDWNSRSQSCPFCRD 545 R ++E T C +CM+ +V C H +C C + CP CR Sbjct: 557 RLQEERT------------CKVCMDKEVSIVFIPCGHLVVCKECAPS----LRKCPICRG 600 Query: 546 NLNKT 560 + T Sbjct: 601 TIKGT 605
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 33.9 bits (76), Expect = 0.33 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +3 Query: 405 DAEREEECGICMEMNSKVVLPNCTHAMCLRCYQ---DWNSRSQSCPFCRDNLN 554 D + C IC +M + + C H+ C +C + N+R C + DN++ Sbjct: 129 DKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNID 181
>GOLI_HUMAN (Q86XS8) Goliath homolog precursor (RING finger protein 130)| Length = 419 Score = 33.9 bits (76), Expect = 0.33 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = +3 Query: 420 EECGICME---MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNK 557 + C +C+E N V + C H C W S +CP C+ N+ K Sbjct: 262 DHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
>ATL5E_ARATH (Q9FL42) Putative RING-H2 finger protein ATL5E| Length = 159 Score = 33.9 bits (76), Expect = 0.33 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%) Frame = +3 Query: 426 CGICM---EMNSKV-VLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 C IC+ E V +P C H C +W S +CP CR++ Sbjct: 94 CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNS 138
>RNF41_BRARE (Q7ZW16) RING finger protein 41| Length = 318 Score = 33.9 bits (76), Expect = 0.33 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = +3 Query: 426 CGICME-MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 C IC + V P+C HA C C W ++ Q CP R Sbjct: 18 CPICSGVLEEPVRAPHCEHAFCNACITQWFAQQQICPVDR 57
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 33.9 bits (76), Expect = 0.33 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTH-AMCLRCYQDWNSRSQSCPFCRDNL 551 EC +C+E VL C H +C++CY + + CP CR ++ Sbjct: 226 ECKVCLERQRDAVLLPCRHFCVCMQCYFALDGK---CPTCRQDV 266
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 33.9 bits (76), Expect = 0.33 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +3 Query: 405 DAEREEECGICMEMNSKVVLPNCTHAMCLRCYQ---DWNSRSQSCPFCRDNLN 554 D + C IC +M + + C H+ C +C + N+R C + DN++ Sbjct: 131 DKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNID 183
>ATL2G_ARATH (O64763) RING-H2 finger protein ATL2G precursor (RING-H2 finger| protein ATL9) Length = 378 Score = 33.9 bits (76), Expect = 0.33 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC +C+ + + ++P C H C W S +CP CR +L Sbjct: 134 ECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADL 180
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 EC IC+E+ + V C H C C ++ + CP C++++ K Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 EC IC+E+ + V C H C C ++ + CP C++++ K Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 EC IC+E+ + V C H C C ++ + CP C++++ K Sbjct: 23 ECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITK 70
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 EC IC+E+ + V C H C C ++ + CP C++++ K Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 EC IC+E+ + V C H C C ++ + CP C++++ K Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 EC IC+E+ + V C H C C ++ + CP C++++ K Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1063 Score = 33.5 bits (75), Expect = 0.43 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +3 Query: 399 DVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPF-CRDNLN 554 D D + + +C +C ++ + C H C C W + SCP CR L+ Sbjct: 9 DGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLS 61
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 33.5 bits (75), Expect = 0.43 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Frame = +3 Query: 387 TSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRS-------QSCPFCR 542 TS VD E C IC+E+ ++ + +C H+ C C ++ S SCP CR Sbjct: 2 TSTVLVDIRDEVTCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCR 60
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 33.5 bits (75), Expect = 0.43 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = +3 Query: 384 ATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS---CPFCRDNLN 554 A L+ + + + +C IC+E+ + ++ C H+ C C + + S CP CR +++ Sbjct: 2 AWRLTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVD 61
>ATL2M_ARATH (O82353) RING-H2 finger protein ATL2M| Length = 214 Score = 33.5 bits (75), Expect = 0.43 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%) Frame = +3 Query: 426 CGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDN 548 C IC+ E ++P C H L C W + SCP CR++ Sbjct: 138 CSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNS 182
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 33.5 bits (75), Expect = 0.43 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRC-YQDWNSRS--QSCPFCRDNLNK 557 EC IC+E+ + V C H C C + N R CP C++++ K Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITK 70
>UB7I3_MOUSE (Q9WUB0) Ubiquitin-conjugating enzyme 7-interacting protein 3| (UbcM4-interacting protein 28) Length = 498 Score = 33.5 bits (75), Expect = 0.43 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 15/83 (18%) Frame = +3 Query: 333 KQKAVCMERYRRRDEDEATSLSDVDAEREE--------ECGICMEM---NSKVVLPNCTH 479 +++A+ + R++ + E L V E+ EC +C + VVL C H Sbjct: 231 EEEALRQYQQRKQQQQEGNYLQHVQLEQRSLVLNTEPTECPVCYSVLAPGEAVVLRECLH 290 Query: 480 AMCLRCYQDWNSRSQ----SCPF 536 C C Q SQ +CPF Sbjct: 291 TFCRECLQGTIRNSQEAEVACPF 313
>GOLI_RAT (Q6Y290) Goliath homolog precursor (RING finger protein 130)| (R-goliath) Length = 419 Score = 33.5 bits (75), Expect = 0.43 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = +3 Query: 420 EECGICME---MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNK 557 + C +C+E N V + C H C W S +CP C+ N+ K Sbjct: 262 DHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
>GOLI_MOUSE (Q8VEM1) Goliath homolog precursor (RING finger protein 130)| (G1-related zinc finger protein) Length = 419 Score = 33.5 bits (75), Expect = 0.43 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = +3 Query: 420 EECGICME---MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNK 557 + C +C+E N V + C H C W S +CP C+ N+ K Sbjct: 262 DHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
>ATL2F_ARATH (O64762) Putative RING-H2 finger protein ATL2F| Length = 302 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC +C+ + + ++P C H C W S +CP CR +L Sbjct: 95 ECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDL 141
>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) Length = 744 Score = 33.5 bits (75), Expect = 0.43 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +3 Query: 426 CGICMEM-NSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 C IC++ VLP C H C RC Q++ S + SCP CR Sbjct: 22 CSICLDRYRCPKVLP-CLHTFCERCLQNYIPPQSLTLSCPVCR 63
>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING| finger protein HAC1) Length = 744 Score = 33.5 bits (75), Expect = 0.43 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +3 Query: 426 CGICMEM-NSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 C IC++ VLP C H C RC Q++ S + SCP CR Sbjct: 22 CSICLDRYRCPKVLP-CLHTFCERCLQNYIPPQSLTLSCPVCR 63
>TRIM3_HUMAN (O75382) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) (RING finger protein 97) Length = 744 Score = 33.5 bits (75), Expect = 0.43 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 C IC++ + C H C RC Q++ S + SCP CR Sbjct: 22 CSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCR 63
>RAD5_YARLI (Q6C2R8) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1025 Score = 33.5 bits (75), Expect = 0.43 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 31/149 (20%) Frame = +3 Query: 189 RILIYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDM--------------- 323 R++ V T++ E ++ Y I +L+L++ D Sbjct: 678 RVIYSYVLARAQTSLQKSEASEAVGRNYLNILTQILRLRQSCCDPALILRPEAEVPTDEQ 737 Query: 324 ----EDKKQKAVCMERYRRRDEDEATSLSDV------DAEREEECGICMEMNSKVVLPNC 473 E++ Q +++Y + A S D EC IC E +K+ + C Sbjct: 738 LQIEENESQLKSMIQQYNDDTQTSACEYSSEIIAQLQDQSAPPECPICAEDVTKLAISKC 797 Query: 474 THAMCLRC------YQDWNSRSQSCPFCR 542 H C+ C +Q+ ++ C CR Sbjct: 798 LHMGCVDCLADNVRFQESKKQTPVCCICR 826
>ATL2I_ARATH (Q8RX29) RING-H2 finger protein ATL2I| Length = 217 Score = 33.5 bits (75), Expect = 0.43 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +3 Query: 426 CGICM-EMNSKVVL---PNCTHAMCLRCYQDWNSRSQSCPFCR 542 C IC+ + K +L P+C H L+C W + +CP CR Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCR 189
>ASR1_ASHGO (Q75DC2) Alcohol-sensitive RING finger protein 1| Length = 328 Score = 33.5 bits (75), Expect = 0.43 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = +3 Query: 417 EEECGICMEMNSKVV--LPNCTHAMCLRCYQDW---NSRSQSCPFCR 542 ++EC IC E V L C H L C + W +S ++SCP CR Sbjct: 15 QDECSICWESMPSGVGRLMPCGHEYHLACIRKWFHLHSGNRSCPVCR 61
>TNR7_MOUSE (P41272) Tumor necrosis factor receptor superfamily member 7| precursor (CD27L receptor) (T-cell activation antigen CD27) Length = 250 Score = 33.5 bits (75), Expect = 0.43 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Frame = +3 Query: 405 DAEREEECGICMEMNSKVVLPNCT---HAMCLRCYQDWNSRSQSCPFCRDNLN 554 D C C NS ++ NCT +A C C ++W R Q C C LN Sbjct: 74 DYHTRPHCESCRHCNSGFLIRNCTVTANAEC-SCSKNWQCRDQECTECDPPLN 125
>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of| Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1066 Score = 33.5 bits (75), Expect = 0.43 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +3 Query: 399 DVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPF-CRDNLN 554 D D + + +C +C ++ + C H C C W + SCP CR L+ Sbjct: 9 DGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLS 61
>UB7I3_HUMAN (Q9BYM8) Ubiquitin-conjugating enzyme 7-interacting protein 3| (Hepatitis B virus X-associated protein 4) (HBV-associated factor 4) (RING finger protein 54) Length = 500 Score = 33.5 bits (75), Expect = 0.43 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 15/83 (18%) Frame = +3 Query: 333 KQKAVCMERYRRRDEDEATSLSDVDAEREE--------ECGICMEM---NSKVVLPNCTH 479 +++A+ + R++ + E L V ++ EC +C + VVL C H Sbjct: 233 EEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLH 292 Query: 480 AMCLRCYQDWNSRSQ----SCPF 536 C C Q SQ SCPF Sbjct: 293 TFCRECLQGTIRNSQEAEVSCPF 315
>RNF6_HUMAN (Q9Y252) RING finger protein 6 (RING-H2 protein)| Length = 685 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +3 Query: 396 SDVDAEREEECGICME---MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 + +D+E + C +C+ +K+ C H + C W S + +CP CR Sbjct: 622 NSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICR 673
>YDTD_SCHPO (O14218) Hypothetical protein C6B12.13 in chromosome I| Length = 104 Score = 33.5 bits (75), Expect = 0.43 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +3 Query: 327 DKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNS 452 +KK+ VC +++R DE++S SD D++ + C C N+ Sbjct: 59 NKKKSKVCCIFHKQRKFDESSSDSDSDSDSDSSCSSCCSRNA 100
>RNF34_PONPY (Q5NVC7) RING finger protein 34| Length = 372 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +3 Query: 360 YRRRDEDEATSLSDVDAEREEE---CGICMEMNSKVVLPNCTHAM-CLRCYQDWNSRSQS 527 Y+ +E++ + + + EE+ C ICM+ VL C H + C +C R Sbjct: 300 YKENEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKC----GKRMSE 355 Query: 528 CPFCR 542 CP CR Sbjct: 356 CPICR 360
>RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein RIFF)| (FYVE-RING finger protein Momo) (Human RING finger homologous to inhibitor of apoptosis protein) (hRFI) (Caspases-8 and -10-associated RING finger protein 1) (CARP-1) (Caspase regulat Length = 372 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +3 Query: 360 YRRRDEDEATSLSDVDAEREEE---CGICMEMNSKVVLPNCTHAM-CLRCYQDWNSRSQS 527 Y+ +E++ + + + EE+ C ICM+ VL C H + C +C R Sbjct: 300 YKENEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKC----GKRMSE 355 Query: 528 CPFCR 542 CP CR Sbjct: 356 CPICR 360
>ATL5D_ARATH (Q9FG21) Putative RING-H2 finger protein ATL5D| Length = 197 Score = 33.1 bits (74), Expect = 0.56 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Frame = +3 Query: 426 CGICMEMNSKV----VLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 C IC+ K+ VLP+C H C W +CP CR Sbjct: 129 CSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCR 171
>LRSM1_MOUSE (Q80ZI6) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich| repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) Length = 727 Score = 33.1 bits (74), Expect = 0.56 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCL-RCYQDWNSRSQSCPFCRDNLNK 557 EC +C+E +++V C H C +C Q ++CP CR +++ Sbjct: 678 ECVVCLEREAQMVFLTCGHVCCCQQCCQP----LRTCPLCRQEISQ 719
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 33.1 bits (74), Expect = 0.56 Identities = 14/53 (26%), Positives = 22/53 (41%) Frame = +3 Query: 405 DAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTD 563 D +++ C ICM++ L C H+ C C CP C L ++ Sbjct: 40 DLDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSN 92
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 33.1 bits (74), Expect = 0.56 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 11/90 (12%) Frame = +3 Query: 327 DKKQKA----VCMERYRRRDEDEATSLSDVDAEREEE------CGICMEMNSKVVLPNCT 476 DK+Q+A V +++ + T E EE C +C +L C Sbjct: 612 DKEQEAEKLKVRLDKVSSERDKWKTKCQSNSTEEEEMLRNLVLCSVCRSNFKNTILKGCG 671 Query: 477 HAMCLRCYQD-WNSRSQSCPFCRDNLNKTD 563 H C C + +R + CP C +++D Sbjct: 672 HVFCNECVDNRLANRMRKCPSCNKAFDRSD 701
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 33.1 bits (74), Expect = 0.56 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 EC IC+E+ + V C H C C ++ + CP C++ + K Sbjct: 23 ECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITK 70
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 33.1 bits (74), Expect = 0.56 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +3 Query: 405 DAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS-----CPFCR 542 D + E C IC E + V NC H C C ++ + CP CR Sbjct: 7 DNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCR 57
>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)| Length = 381 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +3 Query: 360 YRRRDEDEATSLSDVDAEREEE---CGICMEMNSKVVLPNCTHAM-CLRCYQDWNSRSQS 527 Y+ +E++ + + + EE+ C ICM+ VL C H + C +C R Sbjct: 309 YKENEENQKSYGERMQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKC----GKRMSE 364 Query: 528 CPFCR 542 CP CR Sbjct: 365 CPICR 369
>ATL4E_ARATH (Q9SN28) RING-H2 finger protein ATL4E| Length = 236 Score = 33.1 bits (74), Expect = 0.56 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = +3 Query: 414 REEECGICM---EMNSKVV-LPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 ++ +C +C+ + K+ +P+C H + C W + +CP CR +L Sbjct: 107 KDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 156
>ATL1C_ARATH (Q9SK92) RING-H2 finger protein ATL1C precursor (RING-H2 finger| protein ATL15) Length = 381 Score = 33.1 bits (74), Expect = 0.56 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNL 551 EC +C+ + + ++P C H C W +CP CR NL Sbjct: 117 ECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANL 163
>RNF34_BOVIN (Q5E9J6) RING finger protein 34| Length = 375 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +3 Query: 360 YRRRDEDEATSLSDVDAEREEE---CGICMEMNSKVVLPNCTHAM-CLRCYQDWNSRSQS 527 Y+ +E++ + + + EE+ C ICM+ VL C H + C +C R Sbjct: 303 YKENEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKC----GKRMSE 358 Query: 528 CPFCR 542 CP CR Sbjct: 359 CPICR 363
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 33.1 bits (74), Expect = 0.56 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +3 Query: 405 DAEREEECGICMEMNSKVVLPNCTHAMCLRCYQD-WNSRSQ-SCPFCRDNL 551 D E C +C+E+ V+ C H C C W +S +CP C++++ Sbjct: 139 DFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKVWEGQSSFACPECKESI 189
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 33.1 bits (74), Expect = 0.56 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQ---SCPFCRDNLNK 557 EC IC+E+ + V C H C C ++ + CP C++ + K Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITK 70
>RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein RIFF)| (Phafin-1) Length = 376 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +3 Query: 360 YRRRDEDEATSLSDVDAEREEE---CGICMEMNSKVVLPNCTHAM-CLRCYQDWNSRSQS 527 Y+ +E++ + + + EE+ C ICM+ VL C H + C +C R Sbjct: 304 YKENEENQKSYGERMQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKC----GKRMSE 359 Query: 528 CPFCR 542 CP CR Sbjct: 360 CPICR 364
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 33.1 bits (74), Expect = 0.56 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCY-QDWNSRSQSCPFCR 542 +C +C+E+ + V C H C C + +CP+CR Sbjct: 35 DCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYCR 75
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 33.1 bits (74), Expect = 0.56 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +3 Query: 423 ECGICMEMNSKVVLPNCTHAMCLRCY-QDWNSRSQSCPFCR 542 +C +C+E+ + V C H C C + +CP+CR Sbjct: 35 DCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYCR 75
>RNF11_MOUSE (Q9QYK7) RING finger protein 11 (NEDD4 WW domain-binding protein 2)| (Sid 1669) Length = 154 Score = 32.7 bits (73), Expect = 0.73 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Frame = +3 Query: 399 DVDAEREEECGICME---MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRD 545 D ++ EC ICM + C H L C DW RS +CP C + Sbjct: 90 DGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSCME 141
>RNF11_HUMAN (Q9Y3C5) RING finger protein 11 (Sid 1669)| Length = 154 Score = 32.7 bits (73), Expect = 0.73 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Frame = +3 Query: 399 DVDAEREEECGICME---MNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRD 545 D ++ EC ICM + C H L C DW RS +CP C + Sbjct: 90 DGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSCME 141
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 32.7 bits (73), Expect = 0.73 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 10/66 (15%) Frame = +3 Query: 375 EDEATSLSDVDAEREEECGIC----MEMNSKVVLPNCTHAMCLRC------YQDWNSRSQ 524 ED T + DA ++ EC IC + + VV C H C C +Q+ Sbjct: 815 EDFKTKYPNSDALKDLECSICTCEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSET 874 Query: 525 SCPFCR 542 CP CR Sbjct: 875 ICPNCR 880
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 32.7 bits (73), Expect = 0.73 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Frame = +3 Query: 402 VDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRS-------QSCPFCR 542 VD E C IC+E+ ++ + +C H+ C C S +SCP C+ Sbjct: 7 VDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ 60
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 32.7 bits (73), Expect = 0.73 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 6/52 (11%) Frame = +3 Query: 405 DAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS------CPFCR 542 D + E C IC E + V NC H C C ++ + CP CR Sbjct: 7 DNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCCPLCR 58
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 32.7 bits (73), Expect = 0.73 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +3 Query: 414 REEE--CGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 R+E+ C +C++ + + C H+ C C + + ++ CP CR Sbjct: 2 RDEDFCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCR 46
>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) Length = 803 Score = 32.7 bits (73), Expect = 0.73 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +3 Query: 411 EREEECGICMEMNSKVVLPNCTHAMCLRCYQ-DWNSRSQSCPFCRDNLNK 557 E+ C C E+ + V C H +C C Q + ++ SCP CR +L + Sbjct: 729 EQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 778
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 32.7 bits (73), Expect = 0.73 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Frame = +3 Query: 384 ATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS---CPFCRDNLN 554 ATS E E C IC++ V +C H C C D + S CP C+ Sbjct: 2 ATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFT 61 Query: 555 K 557 K Sbjct: 62 K 62
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 32.7 bits (73), Expect = 0.73 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +3 Query: 411 EREEECGICMEMNSKVVLPNCTHAMCLRCYQ-DWNSRSQSCPFCRDNLNK 557 E+ C C E+ + V C H +C C Q + ++ SCP CR +L + Sbjct: 728 EQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 777
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 32.7 bits (73), Expect = 0.73 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%) Frame = +3 Query: 291 LLQLQRGITDMED--KKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVL 464 L +LQ+ + E+ +K K + DE + +L + +C +C + + Sbjct: 587 LAKLQKQLQSTENILQKYKTNNTNSLLQEDEQQLEALRSI-----AKCSVCSKNWKDTAI 641 Query: 465 PNCTHAMCLRCYQD-WNSRSQSCPFCRDNLNKTD 563 C H C +C Q+ +R + CP C + D Sbjct: 642 TVCGHVFCSKCTQERLAARLRRCPSCNRGFSAND 675
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 32.7 bits (73), Expect = 0.73 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Frame = +3 Query: 381 EATSLSDVDAEREE---ECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFC 539 + T +V E EE C +C + + V+ C H C C+ S +CP C Sbjct: 153 DETQEKEVLKELEEIPFRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMKVSTNCPIC 208
>ATL2J_ARATH (O80927) RING-H2 finger protein ATL2J| Length = 235 Score = 32.7 bits (73), Expect = 0.73 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = +3 Query: 423 ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 EC +C+ + + L C HA + C + W +CP CR +++ Sbjct: 141 ECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDVS 188
>RHA4A_ARATH (Q84TF5) RING-H2 zinc finger protein RHA4a| Length = 174 Score = 32.7 bits (73), Expect = 0.73 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +3 Query: 414 REEECGICM---EMNSKVV-LPNCTHAMCLRCYQDWNSRSQSCPFCRDNLN 554 R+ C +C+ E+ ++V +P C H L C W +CP CR +++ Sbjct: 101 RDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVS 151
>EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Length = 325 Score = 32.7 bits (73), Expect = 0.73 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 9/62 (14%) Frame = +3 Query: 384 ATSLSDVDAEREE-----ECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPF 536 +T+ + E EE EC +C+ + LP C H C W +CP Sbjct: 115 STAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPL 174 Query: 537 CR 542 CR Sbjct: 175 CR 176
>RNF12_HUMAN (Q9NVW2) RING finger protein 12 (LIM domain-interacting RING finger| protein) (RING finger LIM domain-binding protein) (R-LIM) (NY-REN-43 antigen) Length = 624 Score = 32.3 bits (72), Expect = 0.95 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Frame = +3 Query: 219 GTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLS 398 G H + E ++ F SL Q + + +D + + + E+ D S Sbjct: 507 GARREGRHRAPVTFDESGSLPFLSLAQFFL-LNEDDDDQPRGLTKEQI---DNLAMRSFG 562 Query: 399 DVDAEREEECGICM----EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 + DA + C +C+ E N LP C+H + C W S + +CP CR Sbjct: 563 ENDALKT--CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 611
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 32.3 bits (72), Expect = 0.95 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Frame = +3 Query: 381 EATSLSDVDAE-----REEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCR 542 E DV+A+ E C +C++ +V C H +C C Q CP CR Sbjct: 232 EPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPG----LQLCPICR 286
>BIRC4_RAT (Q9R0I6) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP homolog A) (RIAP3) (RIAP-3) Length = 496 Score = 32.3 bits (72), Expect = 0.95 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Frame = +3 Query: 345 VCMERYRRRDEDEATSLS-DVDAER-------EEECGICMEMNSKVVLPNCTHAM-CLRC 497 V ++ +DE TSL D+ E E+ C ICM+ N +V C H + C +C Sbjct: 414 VSAQKDNSQDESSQTSLQKDISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQC 473 Query: 498 YQDWNSRSQSCPFC 539 + CP C Sbjct: 474 AE----AVDKCPMC 483
>BIRC4_MOUSE (Q60989) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP homolog A) (MIAP3) (MIAP-3) Length = 496 Score = 32.3 bits (72), Expect = 0.95 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 9/106 (8%) Frame = +3 Query: 249 KASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLS-DVDAER--- 416 K +++E S L L+ I D+ V ++ DE TSL D+ E Sbjct: 389 KKTMEEKIQTSGSSYLSLEVLIADL-------VSAQKDNTEDESSQTSLQKDISTEEQLR 441 Query: 417 ----EEECGICMEMNSKVVLPNCTHAM-CLRCYQDWNSRSQSCPFC 539 E+ C ICM+ N +V C H + C +C + CP C Sbjct: 442 RLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAE----AVDKCPMC 483
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 32.3 bits (72), Expect = 0.95 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = +3 Query: 426 CGICMEMNSKVVLPNCTHAMCLRCYQD-WNSRSQSCPFCRDNLNKTD 563 C +C + L C H C +C QD ++R + CP C ++ D Sbjct: 648 CSLCSKNWKDTALKVCGHVFCHQCAQDRLDARLRKCPNCNKPFSQND 694
>ARI2_DROME (O76924) Protein ariadne-2 (Ari-2)| Length = 509 Score = 32.3 bits (72), Expect = 0.95 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Frame = +3 Query: 372 DEDEATSLSDVDAEREEECGICMEMN---SKVVLPNCTHAMCLRCYQDW---NSRSQSCP 533 D+ E + + +C IC+E N + + NC H C C DW S C Sbjct: 296 DDSETANYISAHTKDCPKCHICIEKNGGCNHMQCFNCKHDFCWMCLGDWKTHGSEYYECS 355 Query: 534 FCRDNLN 554 +DN N Sbjct: 356 RYKDNPN 362
>TUL1_YEAST (P36096) Transmembrane ubiquitin ligase 1 (EC 6.3.2.-)| Length = 758 Score = 32.3 bits (72), Expect = 0.95 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 16/64 (25%) Frame = +3 Query: 408 AEREEECGICM----------------EMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFC 539 AE +C ICM + +S +V P C H C ++W + CP C Sbjct: 693 AEHTVDCAICMSDVPIYIEEIPETHKVDQHSYMVTP-CNHVFHTSCLENWMNYKLQCPVC 751 Query: 540 RDNL 551 R L Sbjct: 752 RSPL 755
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 32.3 bits (72), Expect = 0.95 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = +3 Query: 384 ATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQS---CPFCRDNLN 554 A +S + E +C +C+E+ + ++ C H+ C C + S CP CR ++ Sbjct: 2 AWQVSVPELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVD 61 Query: 555 KT 560 + Sbjct: 62 SS 63
>KORB2_ECOLI (P07674) Transcriptional repressor protein korB| Length = 358 Score = 32.3 bits (72), Expect = 0.95 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -1 Query: 263 LDAGFPLMGRHGGCAVDVDLVYEDPHQPESPSEAAVRP 150 LDA G G +D+DL+ EDPHQP + P Sbjct: 41 LDAPAASQGGSGPIELDLDLIDEDPHQPRTADNPGFSP 78
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 32.3 bits (72), Expect = 0.95 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 1/79 (1%) Frame = +3 Query: 330 KKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQD- 506 KK K + DE + +L + +C +C + + C H CL C Q+ Sbjct: 612 KKYKTNNTSSILQEDERQLEALRSI-----AKCSVCSKNWKDTAITVCGHVFCLGCTQER 666 Query: 507 WNSRSQSCPFCRDNLNKTD 563 +R + CP C + D Sbjct: 667 LAARLRRCPTCNKGFSAND 685 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,044,110 Number of Sequences: 219361 Number of extensions: 1962465 Number of successful extensions: 6994 Number of sequences better than 10.0: 365 Number of HSP's better than 10.0 without gapping: 6552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6935 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
