Clone Name | bags9b04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ref|XM_614123.2| PREDICTED: Bos taurus similar to Lipid phosphat... | 36 | 4.2 | 2 | emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... | 36 | 4.2 | 3 | gb|BC102920.1| Bos taurus cDNA clone MGC:128313 IMAGE:7986990, c... | 36 | 4.2 | 4 | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... | 36 | 4.2 |
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>ref|XM_614123.2| PREDICTED: Bos taurus similar to Lipid phosphate phosphohydrolase 3 (Phosphatidic acid phosphatase 2b) (Phosphatidate phosphohydrolase type 2b) (PAP2b) (PAP-2b) (PAP2-beta) (Differentially expressed in rat intestine 42) (Dri42) (LOC534372), mRNA Length = 901 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 21 tcttgctctctgcgacga 38 |||||||||||||||||| Sbjct: 605 tcttgctctctgcgacga 588
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ctagatagtgatcttgct 27 |||||||||||||||||| Sbjct: 148513 ctagatagtgatcttgct 148530
>gb|BC102920.1| Bos taurus cDNA clone MGC:128313 IMAGE:7986990, complete cds Length = 1589 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 21 tcttgctctctgcgacga 38 |||||||||||||||||| Sbjct: 561 tcttgctctctgcgacga 544
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ctagatagtgatcttgct 27 |||||||||||||||||| Sbjct: 31975647 ctagatagtgatcttgct 31975664 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 272,120 Number of Sequences: 3902068 Number of extensions: 272120 Number of successful extensions: 65360 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65333 Number of HSP's gapped (non-prelim): 27 length of query: 39 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 19 effective length of database: 17,155,003,908 effective search space: 325945074252 effective search space used: 325945074252 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)