ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9b23 |
|---|---|
| Clone Library Name | barley_pub |
>GLPQ_ECOLI (P09394) Glycerophosphoryl diester phosphodiesterase precursor (EC| 3.1.4.46) (Glycerophosphodiester phosphodiesterase) Length = 358 Score = 72.8 bits (177), Expect = 9e-13 Identities = 37/101 (36%), Positives = 59/101 (58%) Frame = +1 Query: 328 IAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIGNRTE 507 IAHRG++G +PE T A A +GAD++E D++ +KD +L+ HD L+ TD+ +R Sbjct: 34 IAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFP 93 Query: 508 FAARKRTYEVQGANMTGWFVVDFTLRELKSLRVKQRYDFRD 630 ARK ++ +DFTL E+KSL+ + +D + Sbjct: 94 DRARKD---------GRYYAIDFTLDEIKSLKFTEGFDIEN 125
>GLPQ_HAEIN (Q06282) Glycerophosphoryl diester phosphodiesterase precursor (EC| 3.1.4.46) (Glycerophosphodiester phosphodiesterase) (Surface-exposed lipoprotein D) (Protein D) (Immunoglobulin D-binding protein) (IgD-binding protein) Length = 364 Score = 69.7 bits (169), Expect = 8e-12 Identities = 33/101 (32%), Positives = 59/101 (58%) Frame = +1 Query: 328 IAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIGNRTE 507 IAHRG++G +PE T + A + +D++E D+ +KDG L+ HD L+ TD+ + Sbjct: 38 IAHRGASGYLPEHTLESKALAFAQHSDYLEQDLAMTKDGRLVVIHDHFLDGLTDVAKKFP 97 Query: 508 FAARKRTYEVQGANMTGWFVVDFTLRELKSLRVKQRYDFRD 630 + RK ++V+DFTL+E++SL + + ++ +D Sbjct: 98 YRHRKD---------GRYYVIDFTLKEIQSLEMTENFETKD 129
>GLPQ_TREPA (O30405) Glycerophosphoryl diester phosphodiesterase precursor (EC| 3.1.4.46) (Glycerophosphodiester phosphodiesterase) Length = 356 Score = 61.6 bits (148), Expect = 2e-09 Identities = 34/104 (32%), Positives = 58/104 (55%) Frame = +1 Query: 328 IAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIGNRTE 507 +A+RG+ G +PE T A+ + A +GAD+++ D++ SKD LI L+N TD+ + Sbjct: 28 VAYRGAAGYVPEHTFASKVLAFAQGADYLQQDVVLSKDNQLIVAQSHILDNMTDVAEK-- 85 Query: 508 FAARKRTYEVQGANMTGWFVVDFTLRELKSLRVKQRYDFRDQQY 639 F R+R ++V+DFT+ EL LR + R +++ Sbjct: 86 FPRRQRA-------DGHFYVIDFTVEELSLLRATNSFYTRGKRH 122
>GLPQ2_ARATH (Q9SZ11) Probable glycerophosphoryl diester phosphodiesterase 2| precursor (EC 3.1.4.46) Length = 759 Score = 58.5 bits (140), Expect = 2e-08 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 3/120 (2%) Frame = +1 Query: 256 AARRHGQLDVNHKKQPLQTSRP-YNIAHRGSNGEIPEETSAAYLRAIEEGAD--FIETDI 426 AA+ H Q P T P IA G +G P+ + AY AI + D+ Sbjct: 22 AAQIHAQSKKPKSPWPTLTGDPPLVIARGGFSGLFPDSSYDAYNFAILTSVPDAVLWCDV 81 Query: 427 LASKDGHLICFHDVTLENTTDIGNRTEFAARKRTYEVQGANMTGWFVVDFTLRELKSLRV 606 +KD ICF D+T+ N++ I + R+++Y V G +GWF +DF+L++LK + + Sbjct: 82 QLTKDALGICFPDLTMRNSSSI--EAVYPTRQKSYPVNGVPTSGWFTIDFSLKDLKDVNL 139 Score = 45.4 bits (106), Expect = 2e-04 Identities = 28/91 (30%), Positives = 46/91 (50%) Frame = +1 Query: 328 IAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIGNRTE 507 I G++G+ P T AY +AI++GAD I+ + S DG C + L N+T + + T Sbjct: 363 ITKDGASGDYPGCTDLAYKKAIKDGADVIDCSVQLSSDGTPFCLSSIDLGNSTTV-SLTA 421 Query: 508 FAARKRTYEVQGANMTGWFVVDFTLRELKSL 600 F R T G ++ + T E+++L Sbjct: 422 FRNRSTTVPELG-SLGAIYTFSLTWAEIQTL 451
>GLPQ_BACSU (P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)| (Glycerophosphodiester phosphodiesterase) Length = 293 Score = 58.2 bits (139), Expect = 2e-08 Identities = 37/99 (37%), Positives = 48/99 (48%) Frame = +1 Query: 304 LQTSRPYNIAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENT 483 L R +AHRG++G +PE T +Y A + ADFIE D+ +KDG LI HD L+ T Sbjct: 33 LSPDRILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTKDGKLIVMHDEKLDRT 92 Query: 484 TDIGNRTEFAARKRTYEVQGANMTGWFVVDFTLRELKSL 600 T N GW V D TL ++K L Sbjct: 93 T--------------------NGMGW-VKDHTLADIKKL 110
>YQIK_BACSU (P54527) Hypothetical protein yqiK| Length = 239 Score = 56.2 bits (134), Expect = 9e-08 Identities = 24/53 (45%), Positives = 34/53 (64%) Frame = +1 Query: 334 HRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDI 492 HRG++G+ PE T A+ + IE GAD IE D+ +KDG ++ HD L TT + Sbjct: 7 HRGASGQFPENTMLAFEKGIEAGADGIELDVQLTKDGRIVVIHDERLNRTTSL 59
>GLPQ1_ARATH (Q9FJ62) Probable glycerophosphoryl diester phosphodiesterase 1| precursor (EC 3.1.4.46) Length = 766 Score = 51.2 bits (121), Expect = 3e-06 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 5/118 (4%) Frame = +1 Query: 274 QLDVNHKKQPLQT---SRPYNIAHRGSNGEIPEETSAAYLRAIEEGAD--FIETDILASK 438 QL K P QT P IA G +G +P+ + AY + + D+ +K Sbjct: 32 QLFAQRSKSPWQTLTGDAPLVIARGGFSGLLPDSSLDAYSFVSQTSVPGAVLWCDVQLTK 91 Query: 439 DGHLICFHDVTLENTTDIGNRTEFAARKRTYEVQGANMTGWFVVDFTLRELKSLRVKQ 612 D +CF DV + N ++I + + RK +Y + G WF +DF ++L + +KQ Sbjct: 92 DAIGLCFPDVKMMNASNI--QDVYPKRKTSYLLNGVPTQDWFTIDFNFKDLTKVILKQ 147 Score = 44.7 bits (104), Expect = 3e-04 Identities = 27/92 (29%), Positives = 48/92 (52%) Frame = +1 Query: 328 IAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIGNRTE 507 I+ G++G+ P T AY +AI++GAD I+ + S DG C + L +T++ ++ Sbjct: 368 ISKNGASGDYPGCTDLAYTKAIKDGADVIDCSLQMSSDGIPFCLSSINLGESTNV-VQSP 426 Query: 508 FAARKRTYEVQGANMTGWFVVDFTLRELKSLR 603 F R T G ++ G + E+++LR Sbjct: 427 FRNRSTTVPEIG-SLPGIYSFSLAWSEIQTLR 457
>Y293_MYCGE (P47535) Hypothetical protein MG293| Length = 244 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/74 (36%), Positives = 34/74 (45%) Frame = +1 Query: 289 HKKQPLQTSRPYNIAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDV 468 H KQ L +AHRG + PE T A+ A E D IE D+ +KD L+ HD Sbjct: 2 HNKQLL-------LAHRGYSFIAPENTKLAFDLAFEYCFDGIELDVHLTKDEQLVIIHDE 54 Query: 469 TLENTTDIGNRTEF 510 T T + EF Sbjct: 55 TTLRTALVNKEVEF 68
>Y420_MYCPN (P75367) Hypothetical protein MG293 homolog (A05_orf241a)| Length = 241 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/60 (35%), Positives = 30/60 (50%) Frame = +1 Query: 328 IAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIGNRTE 507 +AHRG + PE T A+ A + D +E D+ +KDG L+ HD T T + E Sbjct: 8 LAHRGYSDIAPENTQLAFELAFQYRFDGVELDVHLTKDGELVIIHDETTTRTALVDKTIE 67
>UGPQ_ECOLI (P10908) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)| (Glycerophosphodiester phosphodiesterase) Length = 247 Score = 40.4 bits (93), Expect = 0.005 Identities = 22/57 (38%), Positives = 28/57 (49%) Frame = +1 Query: 319 PYNIAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTD 489 P +AHRG PE T A+ + G IE D SKDG + HD LE T++ Sbjct: 7 PRIVAHRGGGKLAPENTLASIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSN 63
>YP206_YEAST (Q08959) Probable glycerophosphodiester phosphodiesterase YPL206C| (EC 3.1.4.46) Length = 321 Score = 40.4 bits (93), Expect = 0.005 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +1 Query: 328 IAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHD 465 + HR PE T A+ +A GAD IETD+ + DG ++ HD Sbjct: 5 VGHRAFKARYPENTLLAFEKAYAAGADVIETDLQMTSDGMVVVNHD 50
>YE52_SCHPO (O14169) Hypothetical protein C4D7.02c in chromosome I| Length = 319 Score = 40.0 bits (92), Expect = 0.007 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 8/60 (13%) Frame = +1 Query: 319 PYNIAHRGS--------NGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTL 474 P IAHRG + PE T A+ +A++ GAD +ETD+ +KD + HD L Sbjct: 32 PLVIAHRGKCLTYVYRYKAKYPENTILAFQQAVKAGADCVETDVRLTKDEVVCILHDRNL 91
>K1434_HUMAN (Q9NPB8) Protein KIAA1434| Length = 672 Score = 36.6 bits (83), Expect = 0.072 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 8/59 (13%) Frame = +1 Query: 319 PYNIAHRGSNG--------EIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVT 471 P ++ HRG+ ++ E T A+ A GA F+E D+ SKD + +HD+T Sbjct: 318 PLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLT 376
>Y2277_MYCTU (Q50687) Hypothetical protein Rv2277c/MT2337 precursor| Length = 301 Score = 36.2 bits (82), Expect = 0.094 Identities = 19/61 (31%), Positives = 26/61 (42%) Frame = +1 Query: 307 QTSRPYNIAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTT 486 QT P +AHR + PE T A A+ G D + + S DG + + L T Sbjct: 27 QTDDPMIVAHRAGTRDFPENTVLAITNAVAAGVDGMWLTVQVSSDGVPVLYRPSDLATLT 86 Query: 487 D 489 D Sbjct: 87 D 87
>YRU3_CAEEL (Q10049) Hypothetical protein T09B9.3 precursor| Length = 340 Score = 35.0 bits (79), Expect = 0.21 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +1 Query: 328 IAHRG-SNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIGNRT 504 I+ RG ++G + + T A+ +A + GAD I D+ +KDG LI V L ++ D N T Sbjct: 68 ISDRGEAHGSVHKNTIPAFRQAKQNGADTIVMDVRMTKDGMLI----VLLPDSVDTDNAT 123 Query: 505 EFAARKRTYEVQGANMTG 558 ++ N+ G Sbjct: 124 YIVDETHWIQMSQLNVYG 141
>GDE1_YEAST (Q02979) Glycerophosphodiester phosphodiesterase GDE1 (EC 3.1.4.46)| Length = 1223 Score = 33.1 bits (74), Expect = 0.80 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 15/80 (18%) Frame = +1 Query: 289 HKKQPLQTSRPY--------NIAHRG-------SNGEIPEETSAAYLRAIEEGADFIETD 423 H + PL+ + Y I HRG + +I E T +++ A GA ++E D Sbjct: 854 HPQLPLERTETYWKSLVSTRVIGHRGLGKNNPNKSLQIGENTVESFIMAASLGASYVEFD 913 Query: 424 ILASKDGHLICFHDVTLENT 483 + +KD + +HD + T Sbjct: 914 VQLTKDNVPVVYHDFLVAET 933
>COBT_RHILO (Q98KN9) Nicotinate-nucleotide--dimethylbenzimidazole| phosphoribosyltransferase (EC 2.4.2.21) (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase) Length = 336 Score = 32.7 bits (73), Expect = 1.0 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +1 Query: 211 IALVLLFLGGSDA-NPAARRHG-QLDVNHKKQPLQTSRPYNIAHRGSNGEIPEETSAAYL 384 + +V F GG A N AR G +LDV PL P G ++P A+L Sbjct: 90 VQMVANFAGGGAAINQLARIAGAELDVI----PLDLDHP-----TGDFTQVPAMDEKAFL 140 Query: 385 RAIEEGADFIETDILASKDGHLICFHDVTLENTT 486 A+ G D + +KD L+CF ++ + NTT Sbjct: 141 AAVSAGYDAV------TKDLDLVCFGEMGIGNTT 168
>YKT5_SCHPO (Q9C104) Hypothetical protein PB1E7.05 in chromosome I| Length = 1076 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 8/60 (13%) Frame = +1 Query: 328 IAHRGSNGEIP--------EETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENT 483 I HRG P E T ++++A + GA ++E D+ +KD + +HD + T Sbjct: 750 IGHRGLGKNQPDRLSLQLGENTLQSFIKAADLGASYVELDVQMTKDMVPVVYHDFIVNET 809
>SORL_HUMAN (Q92673) Sortilin-related receptor precursor (Sorting protein-related| receptor containing LDLR class A repeats) (SorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding Length = 2214 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +3 Query: 219 CTPIPWRIRCQPSCPSPRSAGCKPQEAATTDIQT---LQHCPQGFQWRN 356 C P P + C P + RS C P++ +++ + + + CPQG+Q +N Sbjct: 1021 CVPRPCSLLCLPKANNSRSCRC-PEDVSSSVLPSGDLMCDCPQGYQLKN 1068
>Y566_MYCPN (P75212) Hypothetical protein MG385 homolog (H03_orf237)| Length = 237 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/96 (23%), Positives = 45/96 (46%) Frame = +1 Query: 316 RPYNIAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIG 495 + + IAHRG + PE T A+ A G D + ++ +KD ++ VT + +G Sbjct: 3 KQFLIAHRGYSTIAPENTHLAFAAAQLFGFDGLWMEVQLTKDKQIV----VTNLDNYKVG 58 Query: 496 NRTEFAARKRTYEVQGANMTGWFVVDFTLRELKSLR 603 N+T + ++ N+ F V+ + + +L+ Sbjct: 59 NKTHKLSDINLVNLKKINLAKQFKVNVQEQTILTLK 94
>YAJB_SCHPO (Q09910) Hypothetical protein C30D11.11 in chromosome I| Length = 442 Score = 30.8 bits (68), Expect = 4.0 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = -1 Query: 479 FSSVTS*KHMRCPSFDASISVSMKSAPSSIALKYAADVSSG 357 FSS+++ KHMRC + + +S A S I+++Y A V G Sbjct: 266 FSSLSNYKHMRCAACMDYVGISALIAASIISVEYHAFVCQG 306
>Y385_MYCGE (P47625) Hypothetical protein MG385| Length = 236 Score = 30.8 bits (68), Expect = 4.0 Identities = 22/96 (22%), Positives = 45/96 (46%) Frame = +1 Query: 316 RPYNIAHRGSNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHDVTLENTTDIG 495 + + IA+RG + PE T A+ A D I DI +KD ++ VT + + Sbjct: 3 KQFLIAYRGYSSIAPENTKLAFQAAQVFDFDGIWIDIQLTKDKQIV----VTHKENFKVS 58 Query: 496 NRTEFAARKRTYEVQGANMTGWFVVDFTLRELKSLR 603 N+ + +++ N+ F + T +++++L+ Sbjct: 59 NKNLNLNQINLVDLKKVNLASEFKLKVTSQQIQTLK 94
>GDE1_ASHGO (Q74ZH9) Glycerophosphodiester phosphodiesterase GDE1 (EC 3.1.4.46)| Length = 1321 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 9/64 (14%) Frame = +1 Query: 328 IAHRG--------SNGEIPEETSAAYLRAIEEGADFIETDILASKDGHLICFHD-VTLEN 480 I HRG + ++ E T +++ A GA ++E D+ +KD + +HD + E+ Sbjct: 975 IGHRGLGKNMNTNKSLQLGENTVESFIAAASLGASYVEFDVQLTKDNIPVVYHDFLVAES 1034 Query: 481 TTDI 492 DI Sbjct: 1035 GVDI 1038
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 30.0 bits (66), Expect = 6.7 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +3 Query: 192 PLARLRHCPCTPIPWRIRCQPSCPSPRSAGCKPQEAATTDIQTLQHCPQ 338 P + CPC P P C +CP P C PQ+ + + CPQ Sbjct: 45 PCCPPKPCPCPP-PCPCPCPATCPCPLKPPCCPQKCSCCP-KKCTCCPQ 91
>SORL_MOUSE (O88307) Sortilin-related receptor precursor (Sorting protein-related| receptor containing LDLR class A repeats) (mSorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding Length = 2215 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = +3 Query: 219 CTPIPWRIRCQPSCPSPRSAGCKPQEAATTDIQT---LQHCPQGFQWRN 356 C P P + C P + +S C P+ A++ + + + CPQG+Q +N Sbjct: 1021 CVPQPCSLLCLPKANNSKSCRC-PEGVASSVLPSGDLMCDCPQGYQRKN 1068
>YRS7_CAEEL (Q10003) Hypothetical protein T05H10.7| Length = 796 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = +1 Query: 328 IAHRGSNGEIP------EETSAAYLRAIEEGADFIETDILASKDGHLICFHD 465 + HRG+ E T + A + GAD++E D+ +KD + +HD Sbjct: 404 VGHRGAGNSYTKFAMARENTIHSLNTAAKNGADYVEFDVQLTKDRIAVIYHD 455
>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) Length = 833 Score = 29.6 bits (65), Expect = 8.8 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +3 Query: 174 QKRHGLPLARLRHCPCTPIPWRIRCQPSCPSPRSAGCKPQEAA 302 Q +HG R C C P W +C +C ++ C PQ A Sbjct: 149 QCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGA 191
>GPC3_MOUSE (Q8CFZ4) Glypican-3 precursor| Length = 579 Score = 29.6 bits (65), Expect = 8.8 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 171 ASLLGSFSSYQRKPPPPPIGVGVEAREAFKKRRPGTEY 58 A LLG Q +PPPPP + R F++ +PG ++ Sbjct: 13 AMLLGLGCLGQAQPPPPPDATCHQVRSFFQRLQPGLKW 50
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 29.6 bits (65), Expect = 8.8 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +3 Query: 174 QKRHGLPLARLRHCPCTPIPWRIRCQPSCPSPRSAGCKPQEAA 302 Q +HG R C C P W +C +C ++ C PQ A Sbjct: 157 QCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGA 199
>US02_EHV1B (P28964) Gene 68 protein| Length = 418 Score = 29.6 bits (65), Expect = 8.8 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = +3 Query: 129 EAFSDRRR---RNQGGRHQKRHGLPLARLRHCPCTPIPWRI 242 + F D RR R+ RH++ GLPL C P P R+ Sbjct: 353 DTFEDNRRDELRHDDSRHRRHRGLPLRARSPPQCQPAPPRL 393
>GPC3_RAT (P13265) Glypican-3 precursor (Intestinal protein OCI-5)| Length = 597 Score = 29.6 bits (65), Expect = 8.8 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 171 ASLLGSFSSYQRKPPPPPIGVGVEAREAFKKRRPGTEY 58 A LLG Q +PPPPP + R F++ +PG ++ Sbjct: 13 AMLLGLGCLGQAQPPPPPDATCHQVRSFFQRLQPGLKW 50 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,624,289 Number of Sequences: 219361 Number of extensions: 2216358 Number of successful extensions: 7237 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 6740 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7194 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
